Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30069
         (495 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9Y284 Cluster: UPF0139 protein C19orf56; n=15; Coeloma...    88   1e-16
UniRef50_Q9VRJ8 Cluster: UPF0139 protein CG10674; n=19; Eumetazo...    87   3e-16
UniRef50_A7PDD0 Cluster: Chromosome chr17 scaffold_12, whole gen...    41   0.013
UniRef50_A5B7C7 Cluster: Putative uncharacterized protein; n=1; ...    41   0.013
UniRef50_Q9SD88 Cluster: UPF0139 protein At5g07960; n=4; Magnoli...    40   0.040
UniRef50_Q8TIG9 Cluster: Putative uncharacterized protein; n=1; ...    36   0.66 
UniRef50_Q2SEG3 Cluster: Transposase and inactivated derivatives...    33   3.5  
UniRef50_Q8IB79 Cluster: Putative uncharacterized protein PF08_0...    33   3.5  
UniRef50_Q8RET2 Cluster: Putative uncharacterized protein FN1009...    32   6.1  
UniRef50_Q7RIZ8 Cluster: Nucleotide-binding protein; n=3; Plasmo...    32   8.1  
UniRef50_A5K8K7 Cluster: Putative uncharacterized protein; n=1; ...    32   8.1  

>UniRef50_Q9Y284 Cluster: UPF0139 protein C19orf56; n=15;
           Coelomata|Rep: UPF0139 protein C19orf56 - Homo sapiens
           (Human)
          Length = 106

 Score = 87.8 bits (208), Expect = 1e-16
 Identities = 40/47 (85%), Positives = 44/47 (93%)
 Frame = +2

Query: 257 AVFCSSISFANSRVSDDTKQIVSSFMLSISAVVMSYLQNPAPMTPPW 397
           AV+CS ISFANSR S+DTKQ++SSFMLSISAVVMSYLQNP PMTPPW
Sbjct: 60  AVYCSFISFANSRSSEDTKQMMSSFMLSISAVVMSYLQNPQPMTPPW 106



 Score = 82.6 bits (195), Expect = 4e-15
 Identities = 34/52 (65%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
 Frame = +3

Query: 102 ADPRRADRERRYKPPPPTSAPA-EDLTTDYMNILGMVFSMCGLMMRLKWCAW 254
           +DPRR ++  RYKPPP    PA +D T DYMN+LGM+FSMCGLM++LKWCAW
Sbjct: 7   SDPRRPNKVLRYKPPPSECNPALDDPTPDYMNLLGMIFSMCGLMLKLKWCAW 58


>UniRef50_Q9VRJ8 Cluster: UPF0139 protein CG10674; n=19;
           Eumetazoa|Rep: UPF0139 protein CG10674 - Drosophila
           melanogaster (Fruit fly)
          Length = 108

 Score = 86.6 bits (205), Expect = 3e-16
 Identities = 38/49 (77%), Positives = 45/49 (91%)
 Frame = +2

Query: 257 AVFCSSISFANSRVSDDTKQIVSSFMLSISAVVMSYLQNPAPMTPPWAA 403
           A++CS ISFA+SR SDD KQ++SSFMLS+SAVVMSYLQNPA MTPPWA+
Sbjct: 60  ALYCSCISFASSRASDDAKQVLSSFMLSVSAVVMSYLQNPAAMTPPWAS 108



 Score = 77.4 bits (182), Expect = 2e-13
 Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 3/58 (5%)
 Frame = +3

Query: 90  MQLSADPRRADRERRYKPPP---PTSAPAEDLTTDYMNILGMVFSMCGLMMRLKWCAW 254
           M ++ DPRR ++  RYK P     +    ED+  DYMNILGM+FSMCGLMM+LKWCAW
Sbjct: 1   MNMTVDPRRKEKINRYKAPKNQGQSGGANEDMMPDYMNILGMIFSMCGLMMKLKWCAW 58


>UniRef50_A7PDD0 Cluster: Chromosome chr17 scaffold_12, whole genome
           shotgun sequence; n=4; Magnoliophyta|Rep: Chromosome
           chr17 scaffold_12, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 109

 Score = 41.1 bits (92), Expect = 0.013
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = +3

Query: 105 DPRRADRERRYKPPPPTSAPAEDLTTDYMNILGMVFSMCGLMMRLKWCAW-QLYFVPASV 281
           DPR+      Y  P       EDL  DY   + ++F++ GLM R K C+W  + F   S+
Sbjct: 13  DPRQPSTANPYVAP---MVRPEDLPVDYSGFIAVIFAIVGLMFRYKLCSWLAIIFCAQSL 69

Query: 282 LQTQEFPMTLNRL 320
              + F   L ++
Sbjct: 70  SNMRNFENDLKQI 82


>UniRef50_A5B7C7 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 116

 Score = 41.1 bits (92), Expect = 0.013
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = +3

Query: 105 DPRRADRERRYKPPPPTSAPAEDLTTDYMNILGMVFSMCGLMMRLKWCAW-QLYFVPASV 281
           DPR+      Y  P       EDL  DY   + ++F++ GLM R K C+W  + F   S+
Sbjct: 13  DPRQPSTANPYVAP---MVRPEDLPVDYSGFIAVIFAIVGLMFRYKLCSWLAIIFCAQSL 69

Query: 282 LQTQEFPMTLNRL 320
              + F   L ++
Sbjct: 70  SNMRNFENDLKQI 82


>UniRef50_Q9SD88 Cluster: UPF0139 protein At5g07960; n=4;
           Magnoliophyta|Rep: UPF0139 protein At5g07960 -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 107

 Score = 39.5 bits (88), Expect = 0.040
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = +3

Query: 105 DPRRADRERRYKPPPPTSAPAEDLTTDYMNILGMVFSMCGLMMRLKWCAW 254
           DPR+    + Y P P   AP EDL  DY   + ++  + G+M R K C+W
Sbjct: 13  DPRQPSAAKPYIPRPV--AP-EDLPVDYSGFIAVILGVSGVMFRYKICSW 59


>UniRef50_Q8TIG9 Cluster: Putative uncharacterized protein; n=1;
           Methanosarcina acetivorans|Rep: Putative uncharacterized
           protein - Methanosarcina acetivorans
          Length = 220

 Score = 35.5 bits (78), Expect = 0.66
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
 Frame = +2

Query: 215 NVWLNDEI-EMVRVAAVFCSSISF-ANSRVSDDTKQIVSSFMLSISAVVMSYLQNPAPMT 388
           +VW  D   EM+++A  FC+     A+  V D TK++ S F + ++  V  Y ++P P+ 
Sbjct: 89  DVWGIDVAPEMIKLAKQFCNKSKIKAHLSVGDATKELQSGFDVCVALGVFEYFKDPRPIL 148

Query: 389 PPWAALT 409
               A T
Sbjct: 149 NNMIAAT 155


>UniRef50_Q2SEG3 Cluster: Transposase and inactivated derivatives;
           n=1; Hahella chejuensis KCTC 2396|Rep: Transposase and
           inactivated derivatives - Hahella chejuensis (strain
           KCTC 2396)
          Length = 233

 Score = 33.1 bits (72), Expect = 3.5
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 7/38 (18%)
 Frame = -3

Query: 286 CKTDAGTKYSCHAH-------HFNLIIKPHIENTIPKI 194
           C   A  +Y C+ H        FNL++ PHIEN IP++
Sbjct: 39  CVGKASEQYQCYVHAYVLLKNEFNLLVTPHIENGIPQM 76


>UniRef50_Q8IB79 Cluster: Putative uncharacterized protein
           PF08_0029; n=6; Plasmodium|Rep: Putative uncharacterized
           protein PF08_0029 - Plasmodium falciparum (isolate 3D7)
          Length = 373

 Score = 33.1 bits (72), Expect = 3.5
 Identities = 17/64 (26%), Positives = 31/64 (48%)
 Frame = +2

Query: 152 HFCSSRRPNHRLYEYFRDGIFNVWLNDEIEMVRVAAVFCSSISFANSRVSDDTKQIVSSF 331
           H    R+ N+   E  +DG F     +E+  +    ++   I++    + +DT + V+SF
Sbjct: 231 HILIDRKENYMKIENQKDGNFFPSNGNELTCLNNNHIYNDHINYLKGNIENDTSENVNSF 290

Query: 332 MLSI 343
           M SI
Sbjct: 291 MFSI 294


>UniRef50_Q8RET2 Cluster: Putative uncharacterized protein FN1009;
           n=1; Fusobacterium nucleatum subsp. nucleatum|Rep:
           Putative uncharacterized protein FN1009 - Fusobacterium
           nucleatum subsp. nucleatum
          Length = 114

 Score = 32.3 bits (70), Expect = 6.1
 Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = -1

Query: 279 LMLEQNTAATRTISISSLSH-TLKIPSLKYSYNLWLGL 169
           + L+QN   T +   +SL++ TLK P  K+SY++W+ +
Sbjct: 48  IFLKQNNDLTYSKERNSLAYFTLKFPDYKFSYHVWINI 85


>UniRef50_Q7RIZ8 Cluster: Nucleotide-binding protein; n=3;
           Plasmodium (Vinckeia)|Rep: Nucleotide-binding protein -
           Plasmodium yoelii yoelii
          Length = 650

 Score = 31.9 bits (69), Expect = 8.1
 Identities = 19/61 (31%), Positives = 32/61 (52%)
 Frame = -1

Query: 312 LVSSETLEFAKLMLEQNTAATRTISISSLSHTLKIPSLKYSYNLWLGLLLEQKWVEVVYS 133
           ++SSE     + + E    ATR ISI   +HTL +PS++     ++ L  +    + V+S
Sbjct: 495 ILSSENHYLIQKLEEIFENATREISIIKYNHTLNLPSIQIYNKYYIQLSFDSIQNKYVFS 554

Query: 132 D 130
           D
Sbjct: 555 D 555


>UniRef50_A5K8K7 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 541

 Score = 31.9 bits (69), Expect = 8.1
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = -1

Query: 363 YDITTAEMDNMKELTICLVSSETLEFAKLMLEQNTAATRTISISSLSHTLKI 208
           Y+ +  E D MK+L   +  SE +++      Q TAA R  S + ++H LK+
Sbjct: 102 YNASARESDQMKDLKYGVNESEDVKYVGCKSRQCTAAQRGNSCAPINHFLKM 153


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 463,605,623
Number of Sequences: 1657284
Number of extensions: 8881154
Number of successful extensions: 33111
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 31446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33008
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28855457139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)