Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30063
(477 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97; Eukary... 140 2e-32
UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14; Eukary... 130 2e-29
UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes a... 125 4e-28
UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7; Fungi/M... 119 3e-26
UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39; Euka... 116 3e-25
UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2; Cryptos... 107 9e-23
UniRef50_UPI00006CAB39 Cluster: hypothetical protein TTHERM_0078... 107 1e-22
UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1; Dictyos... 106 2e-22
UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6; Pezizo... 105 4e-22
UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, wh... 99 3e-20
UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4; Trypano... 99 4e-20
UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n... 99 4e-20
UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;... 99 6e-20
UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6; Trypano... 96 4e-19
UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8; Dikarya... 87 1e-16
UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3; Trichom... 85 1e-15
UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2; ... 84 2e-15
UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27 pir|... 79 7e-14
UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal ... 75 8e-13
UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramec... 64 2e-09
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 62 5e-09
UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillar... 61 1e-08
UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1; ... 56 4e-07
UniRef50_Q3LW52 Cluster: Ribosomal protein L27; n=1; Bigelowiell... 39 0.066
UniRef50_A7TEU5 Cluster: Putative uncharacterized protein; n=1; ... 36 0.46
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 36 0.61
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 36 0.61
UniRef50_Q0VRK4 Cluster: Putative uncharacterized protein; n=1; ... 35 0.81
UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1; Encepha... 35 0.81
UniRef50_Q08W76 Cluster: Hydrogen peroxide-inducible genes activ... 34 1.4
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 34 1.9
UniRef50_Q3ELB5 Cluster: Cell surface protein; n=1; Bacillus thu... 33 3.3
UniRef50_Q1YQZ7 Cluster: Short chain dehydrogenase family protei... 33 3.3
UniRef50_Q02BB6 Cluster: Putative uncharacterized protein; n=1; ... 33 3.3
UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3; Oe... 33 3.3
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 33 4.3
UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17; Eukaryo... 33 4.3
UniRef50_A7Q8E5 Cluster: Chromosome chr5 scaffold_64, whole geno... 33 4.3
UniRef50_Q54LS5 Cluster: Putative uncharacterized protein; n=5; ... 33 4.3
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 33 4.3
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 33 4.3
UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14; Archa... 33 4.3
UniRef50_Q8PSL5 Cluster: Putative uncharacterized protein; n=1; ... 32 5.7
UniRef50_Q9AXC5 Cluster: Putative uncharacterized protein; n=1; ... 32 7.5
UniRef50_Q6YTT4 Cluster: Proliferating-cell nucleolar antigen-li... 32 7.5
UniRef50_A2YWD8 Cluster: Putative uncharacterized protein; n=2; ... 32 7.5
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 32 7.5
UniRef50_Q4UHL2 Cluster: Protein kinase, putative; n=3; Piroplas... 31 10.0
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 31 10.0
UniRef50_O15595 Cluster: 60S ribosomal protein L6; n=5; Entamoeb... 31 10.0
>UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97;
Eukaryota|Rep: 60S ribosomal protein L27 - Homo sapiens
(Human)
Length = 136
Score = 140 bits (338), Expect = 2e-32
Identities = 64/81 (79%), Positives = 70/81 (86%)
Frame = +3
Query: 12 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 191
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 192 KIHKRSKIKPFVKVVNYNHLM 254
KI KRSKIK FVKV NYNHLM
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLM 81
Score = 68.1 bits (159), Expect = 9e-11
Identities = 32/54 (59%), Positives = 41/54 (75%), Gaps = 2/54 (3%)
Frame = +2
Query: 257 TRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 412
TRY+VD +K KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 83 TRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
>UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14;
Eukaryota|Rep: 60S ribosomal protein L27 -
Caenorhabditis elegans
Length = 136
Score = 130 bits (313), Expect = 2e-29
Identities = 59/81 (72%), Positives = 68/81 (83%)
Frame = +3
Query: 12 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 191
MGKIMKPGKVVLVL G+YAGRKA+VVK DEG SD+ Y HA +AGIDRYP KV K MGK
Sbjct: 1 MGKIMKPGKVVLVLRGKYAGRKAVVVKQQDEGVSDRTYPHAIIAGIDRYPLKVTKDMGKK 60
Query: 192 KIHKRSKIKPFVKVVNYNHLM 254
KI KR+K+KPF+KVV+Y HL+
Sbjct: 61 KIEKRNKLKPFLKVVSYTHLL 81
Score = 65.3 bits (152), Expect = 7e-10
Identities = 29/54 (53%), Positives = 40/54 (74%), Gaps = 2/54 (3%)
Frame = +2
Query: 257 TRYTVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 412
TRY+VD +F+K + + LK P+K++K + +FEERYK+GKNKWFF KLRF
Sbjct: 83 TRYSVDVAFDKTNINKEALKAPSKKRKALVEVKSKFEERYKTGKNKWFFTKLRF 136
>UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L27 - Aedes aegypti
(Yellowfever mosquito)
Length = 98
Score = 125 bits (302), Expect = 4e-28
Identities = 55/73 (75%), Positives = 65/73 (89%)
Frame = +3
Query: 12 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 191
MGKIMK GKVVLVL GRYAGRKAI++K +D+GTSDK +GHA VAGIDRYPR+V +RM K
Sbjct: 1 MGKIMKTGKVVLVLGGRYAGRKAIILKTFDDGTSDKQFGHALVAGIDRYPRRVTRRMNKT 60
Query: 192 KIHKRSKIKPFVK 230
++HKRSKIKPF+K
Sbjct: 61 RLHKRSKIKPFIK 73
>UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7;
Fungi/Metazoa group|Rep: 60S ribosomal protein L27 -
Pectinaria gouldii (Trumpet worm) (Ice-cream cone worm)
Length = 138
Score = 119 bits (287), Expect = 3e-26
Identities = 50/81 (61%), Positives = 64/81 (79%)
Frame = +3
Query: 12 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 191
MGK +KP +V LVL+GR+AG+K +V+K YD GTS++PY HAFV GIDRYPRKV MGK
Sbjct: 1 MGKFVKPDRVALVLNGRHAGKKVVVMKIYDSGTSERPYAHAFVVGIDRYPRKVTATMGKK 60
Query: 192 KIHKRSKIKPFVKVVNYNHLM 254
K +R+++K F K +NYNHLM
Sbjct: 61 KFERRTRVKAFAKFINYNHLM 81
Score = 39.5 bits (88), Expect = 0.038
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +2
Query: 182 GKE*NPQEVQDKAFREGCKL*SLDATRYTVD-FSFEK---FSAKDLKDPAKRKKLRFNTR 349
GK+ + + KAF + L TRY+V F +K F K+ + RK+ + +
Sbjct: 58 GKKKFERRTRVKAFAKFINYNHLMFTRYSVQLFPEDKAKTFGPDRWKNFSDRKEFKKELQ 117
Query: 350 VRFEERYKSGKNKWFFQKLRF 412
ER+ + KN+WFF KLRF
Sbjct: 118 TVMRERFLAAKNRWFFTKLRF 138
>UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39;
Eukaryota|Rep: 60S ribosomal protein L27-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 136
Score = 116 bits (279), Expect = 3e-25
Identities = 49/81 (60%), Positives = 64/81 (79%)
Frame = +3
Query: 12 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 191
M K +K GKV +V+ GRYAG+K ++VK +DEG+ P+GHA VAGI+RYP KV K+ G
Sbjct: 1 MAKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPSKVTKKHGAK 60
Query: 192 KIHKRSKIKPFVKVVNYNHLM 254
K+ KR+KIKPF+KVVNYNHL+
Sbjct: 61 KVAKRTKIKPFIKVVNYNHLL 81
Score = 50.4 bits (115), Expect = 2e-05
Identities = 23/54 (42%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +2
Query: 257 TRYTVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 412
TRYT+D K S + + P++R++ + + FEER+++GKN+WFF KLRF
Sbjct: 83 TRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEERHQAGKNQWFFSKLRF 136
>UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L27 -
Cryptosporidium parvum Iowa II
Length = 162
Score = 107 bits (258), Expect = 9e-23
Identities = 44/82 (53%), Positives = 64/82 (78%)
Frame = +3
Query: 9 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGK 188
KM K+MK G+VV++L+GRYAG+KA+VV ++ GT D+P+ VAG+++ P KVHKR+ K
Sbjct: 17 KMAKLMKQGRVVVLLNGRYAGKKAVVVNTFESGTKDRPFPFVLVAGVEKAPLKVHKRLSK 76
Query: 189 NKIHKRSKIKPFVKVVNYNHLM 254
K+ K+S IKPF+K +N NH+M
Sbjct: 77 EKLKKKSTIKPFLKSINMNHVM 98
>UniRef50_UPI00006CAB39 Cluster: hypothetical protein
TTHERM_00780960; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00780960 - Tetrahymena
thermophila SB210
Length = 128
Score = 107 bits (257), Expect = 1e-22
Identities = 43/83 (51%), Positives = 65/83 (78%)
Frame = +3
Query: 6 SKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMG 185
+ G+ +K G+VV++L GR+AG+KA++VK+ ++GT D+ +GH VAG++R P+KV KRMG
Sbjct: 14 ASFGRGLKYGRVVILLQGRFAGKKAVIVKSSEDGTKDRKFGHVLVAGVERSPKKVTKRMG 73
Query: 186 KNKIHKRSKIKPFVKVVNYNHLM 254
KI KR+ +KPF+K VN NH+M
Sbjct: 74 SKKIQKRTSVKPFIKYVNLNHIM 96
>UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L27 - Dictyostelium discoideum AX4
Length = 144
Score = 106 bits (255), Expect = 2e-22
Identities = 45/81 (55%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = +3
Query: 18 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDK--PYGHAFVAGIDRYPRKVHKRMGKN 191
K +KPG++V++L+G+YAGRKA+V+K +D+ T+ K PYGH VAGID+YPR + + M +
Sbjct: 4 KFIKPGRLVILLNGKYAGRKAVVIKTFDDATASKSRPYGHCLVAGIDKYPRSIVRSMSRK 63
Query: 192 KIHKRSKIKPFVKVVNYNHLM 254
I KR+ I+ FVKVVNYNH+M
Sbjct: 64 TILKRTAIRSFVKVVNYNHIM 84
Score = 40.7 bits (91), Expect = 0.016
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +2
Query: 317 AKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 412
AKR R + FE ++K+GK+KWFF KLRF
Sbjct: 113 AKRAHTRLAVKKIFEAKHKAGKSKWFFSKLRF 144
>UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6;
Pezizomycotina|Rep: 60S ribosomal protein L27e -
Aspergillus fumigatus (Sartorya fumigata)
Length = 186
Score = 105 bits (253), Expect = 4e-22
Identities = 50/117 (42%), Positives = 75/117 (64%), Gaps = 2/117 (1%)
Frame = +3
Query: 18 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKI 197
K MK G+V ++ GRYAG+K ++V+ D G+ P+ +A VAGI+RYP KV +RMGK +
Sbjct: 53 KFMKVGRVAIITRGRYAGKKVVIVQPNDTGSKAHPFPYAIVAGIERYPLKVTRRMGKKMV 112
Query: 198 HKRSKIKPFVKVVNYNHLM--QHVIQLTSALKNSAQKT*KTLQNVRSCVSTREYVLK 362
KRS+IKPF+K+VNYNHLM ++ ++L +Q+T K + T + L+
Sbjct: 113 EKRSRIKPFIKIVNYNHLMPTRYTLELEGLKGAISQETFKEVSTREDAKKTVKKALE 169
Score = 43.6 bits (98), Expect = 0.002
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +2
Query: 257 TRYTVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 412
TRYT++ K S + K+ + R+ + + E+RY SGKN+WFF LRF
Sbjct: 133 TRYTLELEGLKGAISQETFKEVSTREDAKKTVKKALEDRYTSGKNRWFFTPLRF 186
>UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=8; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_10, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1051
Score = 99 bits (238), Expect = 3e-20
Identities = 42/82 (51%), Positives = 63/82 (76%)
Frame = +3
Query: 9 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGK 188
+MGK +KPG+++++L+GRYAG+KAI++K +E T D + + V GI RYPRKV KRMG+
Sbjct: 899 EMGKFLKPGRLIVLLAGRYAGKKAILIKANEETTKDCKFPNGLVVGIQRYPRKVTKRMGQ 958
Query: 189 NKIHKRSKIKPFVKVVNYNHLM 254
+I KR+ +K F+K +N NH+M
Sbjct: 959 KQIRKRTTLKVFIKQLNLNHIM 980
>UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 133
Score = 99.1 bits (236), Expect = 4e-20
Identities = 39/79 (49%), Positives = 61/79 (77%)
Frame = +3
Query: 18 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKI 197
K +KPGKVV+V SGRYAG+KA++V+N D + ++PYGH+ +AG+ +YP+KV + M K I
Sbjct: 2 KFLKPGKVVIVTSGRYAGKKAVIVQNTDSKSKERPYGHSLIAGMKKYPKKVVRGMSKRTI 61
Query: 198 HKRSKIKPFVKVVNYNHLM 254
+RS++ F++VVN+ H +
Sbjct: 62 QRRSRVGVFLRVVNHKHFL 80
Score = 48.8 bits (111), Expect = 6e-05
Identities = 21/52 (40%), Positives = 32/52 (61%)
Frame = +2
Query: 257 TRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 412
TRY +D S E ++ D +K+ + + R F+ RY +G N+WFFQ+LRF
Sbjct: 82 TRYNMDLSRELRGRINVSDASKKARSKQLVRKLFQARYNAGSNRWFFQRLRF 133
>UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L27e, putative -
Theileria parva
Length = 148
Score = 99.1 bits (236), Expect = 4e-20
Identities = 49/115 (42%), Positives = 73/115 (63%)
Frame = +3
Query: 12 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 191
MGK++KPG+VV++LSGR AG KA+VV+ + + +PY + VAG+++ P KV K+M
Sbjct: 1 MGKLLKPGRVVILLSGRRAGCKAVVVQTNESSSKKRPYLNCLVAGVEKAPMKVTKKMSSK 60
Query: 192 KIHKRSKIKPFVKVVNYNHLMQHVIQLTSALKNSAQKT*KTLQNVRSCVSTREYV 356
KI KR K+K FVK VN NHLM +T+ L + + + ++N S R+ V
Sbjct: 61 KIEKRLKLKAFVKYVNVNHLMPTRYMVTTTLDPKSLVSDEQMENKSSRKEARKSV 115
>UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;
Plasmodium|Rep: 60S ribosomal protein L27 homolog -
Plasmodium yoelii yoelii
Length = 181
Score = 98.7 bits (235), Expect = 6e-20
Identities = 41/77 (53%), Positives = 60/77 (77%)
Frame = +3
Query: 24 MKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHK 203
+KPGKVV++L+GR AG+KAI++ Y+ T ++PY + VAGI+++P KV K+M K KI K
Sbjct: 97 LKPGKVVIMLNGRRAGKKAIIINTYEGQTRERPYSYCLVAGIEKHPLKVTKKMSKGKIIK 156
Query: 204 RSKIKPFVKVVNYNHLM 254
RSK+K FVK +N NH++
Sbjct: 157 RSKVKAFVKYINVNHIL 173
>UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 134
Score = 95.9 bits (228), Expect = 4e-19
Identities = 41/81 (50%), Positives = 60/81 (74%)
Frame = +3
Query: 12 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 191
M K +KPGKVV+V +GRYAG KA++V+N D T ++PYG A +AGI +YP+KV + M K
Sbjct: 1 MTKFLKPGKVVIVTAGRYAGHKAVIVQNSDVVTKERPYGRALLAGIKKYPKKVVRGMSKQ 60
Query: 192 KIHKRSKIKPFVKVVNYNHLM 254
I +RS++ F++VVN+ H +
Sbjct: 61 TIARRSQVGVFLRVVNHKHFL 81
Score = 47.6 bits (108), Expect = 1e-04
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +2
Query: 257 TRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 412
TRY VD S E ++ D +KR + + R F+ RY +G + WFFQ+LRF
Sbjct: 83 TRYNVDMSKELRGKINVSDASKRSRSKRLVRHVFQARYNAGSSMWFFQRLRF 134
>UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8;
Dikarya|Rep: 60S ribosomal protein L27 - Ustilago maydis
(Smut fungus)
Length = 190
Score = 87.4 bits (207), Expect = 1e-16
Identities = 40/73 (54%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Frame = +3
Query: 39 VVLVLSGRYAGRK-AIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKI 215
V LV Y+ R +V+K +D+G+ DK + + AGI+RYP+KV KRMG KI KRSK+
Sbjct: 63 VSLVALREYSRRNDVVVIKQFDDGSKDKSFPYIIAAGIERYPQKVTKRMGAKKIAKRSKV 122
Query: 216 KPFVKVVNYNHLM 254
KPFVKV++YNHLM
Sbjct: 123 KPFVKVISYNHLM 135
Score = 46.0 bits (104), Expect = 4e-04
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +2
Query: 257 TRYTVDFSFEKFSAKD--LKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 412
TRY ++ K + K+P++R+ + + FEE+Y SGKNKWFF LRF
Sbjct: 137 TRYALELEGLKGAVTQDTFKEPSQREDAKKQIKQIFEEKYTSGKNKWFFTPLRF 190
>UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L27
- Trichomonas vaginalis G3
Length = 139
Score = 84.6 bits (200), Expect = 1e-15
Identities = 35/78 (44%), Positives = 58/78 (74%)
Frame = +3
Query: 21 IMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIH 200
+++ G+ V++L GR+AG+KA+V+ Y EGT D+ + +A V GI++YP+KV K M +
Sbjct: 3 LLQAGRFVVMLQGRHAGKKAVVLAAYPEGTEDRKFPYAIVMGIEKYPKKVTKDMPTEVLV 62
Query: 201 KRSKIKPFVKVVNYNHLM 254
K++++K FVK VN+NH+M
Sbjct: 63 KKTQVKLFVKAVNFNHVM 80
>UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L27 - Entamoeba histolytica HM-1:IMSS
Length = 139
Score = 83.8 bits (198), Expect = 2e-15
Identities = 36/81 (44%), Positives = 54/81 (66%)
Frame = +3
Query: 12 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 191
M KI+ PG+VV++LSGR+AG+KA+V +GT D+ YG V G++R P K+ ++M
Sbjct: 1 MSKILAPGRVVIILSGRFAGKKAVVSSVNLQGTKDRKYGFVTVVGVERAPLKITRKMSAK 60
Query: 192 KIHKRSKIKPFVKVVNYNHLM 254
R+ +K F KV+N NH+M
Sbjct: 61 VQEMRTSVKSFCKVINVNHVM 81
>UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27
pir||T06451 ribosomal protein L27- garden pea; n=1;
Ostreococcus tauri|Rep: RL27_PEA 60S ribosomal protein
L27 pir||T06451 ribosomal protein L27- garden pea -
Ostreococcus tauri
Length = 184
Score = 78.6 bits (185), Expect = 7e-14
Identities = 35/66 (53%), Positives = 48/66 (72%)
Frame = +3
Query: 27 KPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKR 206
+PGKVV+VL+GRYAG+KA++VKN D+G S PYGHA V G+ PRKV +N +H+
Sbjct: 24 QPGKVVVVLAGRYAGKKAVIVKNVDDGNSAHPYGHALVCGLSTIPRKV-----RNDLHRC 78
Query: 207 SKIKPF 224
++ PF
Sbjct: 79 ARTAPF 84
Score = 47.2 bits (107), Expect = 2e-04
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +2
Query: 215 KAFREGCKL*SLDATRYTVDFSFEKFSAKDLKDPAKRK-KLRFNTRVRFEERYKSGKNKW 391
K F + L TRYT+D +F+ D+ D A +K + + EER+K+GK++W
Sbjct: 118 KTFIKNINYSHLMPTRYTLDVNFKDVVTSDVLDNATKKVAAQKEAKKLLEERFKTGKSRW 177
Query: 392 FFQKLRF 412
FF +L F
Sbjct: 178 FFTRLAF 184
Score = 37.1 bits (82), Expect = 0.20
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 165 KVHKRMGKNKIHKRSKIKPFVKVVNYNHLM 254
+V K+M + K KRSK K F+K +NY+HLM
Sbjct: 101 QVTKKMDEKKQAKRSKCKTFIKNINYSHLM 130
>UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal
protein L27; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L27 - Monodelphis domestica
Length = 124
Score = 74.9 bits (176), Expect = 8e-13
Identities = 38/61 (62%), Positives = 44/61 (72%)
Frame = +3
Query: 69 GRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNH 248
G +I+ + D+GTSDK Y HA VAGID YPRK+ +GK KI KRSKIK FV V NYNH
Sbjct: 5 GSSSILFYDTDDGTSDKSYSHAQVAGIDLYPRKLTAALGK-KISKRSKIKFFVAVYNYNH 63
Query: 249 L 251
L
Sbjct: 64 L 64
>UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramecium
tetraurelia|Rep: 60S ribosomal protein L27 - Paramecium
tetraurelia
Length = 262
Score = 63.7 bits (148), Expect = 2e-09
Identities = 27/56 (48%), Positives = 38/56 (67%)
Frame = +3
Query: 87 VKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLM 254
+K +E T D + + V GI RYPRKV KRMG+ +I KR+ +K F+K +N NH+M
Sbjct: 136 IKANEESTKDAKFPNGLVVGIQRYPRKVTKRMGQKQIRKRTTLKVFIKQLNLNHIM 191
Score = 32.7 bits (71), Expect = 4.3
Identities = 12/21 (57%), Positives = 19/21 (90%)
Frame = +3
Query: 9 KMGKIMKPGKVVLVLSGRYAG 71
+MGK +KPG++V++L+GR AG
Sbjct: 63 QMGKFLKPGRLVVLLAGRQAG 83
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 62.5 bits (145), Expect = 5e-09
Identities = 33/90 (36%), Positives = 51/90 (56%)
Frame = +3
Query: 21 IMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIH 200
I+KPG V +VL GR+AG+KA++V+ +A VAGI PR++ M +
Sbjct: 5 IIKPGLVCIVLQGRHAGKKAVIVEALPHNERGS---YAIVAGIAALPRRITNSMSDEEAV 61
Query: 201 KRSKIKPFVKVVNYNHLMQHVIQLTSALKN 290
R +++ FVK +N NHLM +L + K+
Sbjct: 62 CRGRVRSFVKCMNVNHLMPTSCRLENNYKD 91
>UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillardia
theta|Rep: 60S ribosomal protein L27 - Guillardia theta
(Cryptomonas phi)
Length = 144
Score = 61.3 bits (142), Expect = 1e-08
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Frame = +3
Query: 12 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYD-EGTSDKPYGHAFVAGIDRYPRKVHKRMGK 188
M I K G+VV+VLSG+YAG+KA V+KN + E +K + GI + +K+ M K
Sbjct: 1 MVNIYKTGRVVIVLSGKYAGKKAFVLKNSNIESLCEK---KIIILGIKKEMKKIKYNMSK 57
Query: 189 NKIHKRSKIKPFVKVVNYNHLM--QHVIQLTSALK 287
KI + K F+K +N H+ ++VI+ K
Sbjct: 58 RKIISNLRFKTFIKTINIKHVFPTRYVIETDDVFK 92
>UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1;
Tribolium castaneum|Rep: Putative uncharacterized
protein - Tribolium castaneum (Red flour beetle)
Length = 95
Score = 56.0 bits (129), Expect = 4e-07
Identities = 32/77 (41%), Positives = 41/77 (53%)
Frame = +2
Query: 182 GKE*NPQEVQDKAFREGCKL*SLDATRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFE 361
G+ N Q VQ++ GC + S K K P KRK++RF TRV+ +
Sbjct: 19 GRGQNTQRVQNQPLVIGCDEKHVSPHVIGGITSGGPIPTKSSKYPIKRKRVRFQTRVKVQ 78
Query: 362 ERYKSGKNKWFFQKLRF 412
E KSG+NKWFFQK RF
Sbjct: 79 EGSKSGRNKWFFQKGRF 95
>UniRef50_Q3LW52 Cluster: Ribosomal protein L27; n=1; Bigelowiella
natans|Rep: Ribosomal protein L27 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 131
Score = 38.7 bits (86), Expect = 0.066
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Frame = +3
Query: 33 GKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRM--GKNKIH 200
GK++ L+G+YAG+ +VK+Y + + K + H V + ++ K K N
Sbjct: 8 GKLIFSLAGKYAGKYGFIVKSYSKYKNFKNFNHFLVCFLTNTKFTNKNSKSFISKMNDQP 67
Query: 201 KRSKIKPFVKVVNYNHLM 254
K K K +K++N NH++
Sbjct: 68 KIFKYKIKLKILNANHII 85
>UniRef50_A7TEU5 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 2026
Score = 35.9 bits (79), Expect = 0.46
Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Frame = +3
Query: 57 GRYAGRKAIVVKNYDEGTSDKPYGHAF-VAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKV 233
GRY+ R +V+NY + PY V G++ + K + K + K K FVK
Sbjct: 1808 GRYSIRN--IVENYMKVNPSDPYDVTVDVKGLNDLLDTIDKEKFQKK---KEKYKRFVKE 1862
Query: 234 VNYNHLMQHVIQLTSALKNSAQKT*KTLQNVRSCVSTREYV 356
V YN+ Q+ I T L T N R C+S EYV
Sbjct: 1863 VYYNNSYQNSINFTELL---ILIPLHTTYNPRECLSIDEYV 1900
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 35.5 bits (78), Expect = 0.61
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 18 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 107
K + PG V+++L+GR+AG++ + +K D G
Sbjct: 89 KSITPGTVLIILAGRFAGKRVVALKQLDSG 118
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 35.5 bits (78), Expect = 0.61
Identities = 11/35 (31%), Positives = 27/35 (77%)
Frame = +3
Query: 3 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 107
P+K+ ++PG ++++L+GR+ G++ I++K+ +G
Sbjct: 51 PTKLRPSLQPGTILILLAGRFRGKRVILLKHLGQG 85
>UniRef50_Q0VRK4 Cluster: Putative uncharacterized protein; n=1;
Alcanivorax borkumensis SK2|Rep: Putative
uncharacterized protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 406
Score = 35.1 bits (77), Expect = 0.81
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
Frame = +3
Query: 12 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDR-YPRKVHKRMGK 188
+ +I + V +V++ RY G+ + E D+P GHAF AG+D R+V K G+
Sbjct: 216 IARIAEESPVPIVVARRYIGKIKNSAEEVVEIMPDQPLGHAFRAGVDAGIMRRVGKFTGR 275
Query: 189 NKIHKRS-----------KIKPFVKVVNYNH 248
R+ K+ P + +VNY +
Sbjct: 276 MTYGARTTTVQESFADALKLAPDIPIVNYEY 306
>UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L27
- Encephalitozoon cuniculi
Length = 126
Score = 35.1 bits (77), Expect = 0.81
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +3
Query: 30 PGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRS 209
P +V+V SG+ AG+KA+V+K DE + A + R P++ K + +
Sbjct: 5 PNMIVVVTSGKNAGKKAVVIKQIDE-------RYVLTACVVRIPKEPEDHQPKWIKRRNA 57
Query: 210 KIKPFVKVVNYNHLM 254
K +K N HL+
Sbjct: 58 KFYIILKKYNIAHLI 72
>UniRef50_Q08W76 Cluster: Hydrogen peroxide-inducible genes
activator OxyR; n=1; Stigmatella aurantiaca DW4/3-1|Rep:
Hydrogen peroxide-inducible genes activator OxyR -
Stigmatella aurantiaca DW4/3-1
Length = 228
Score = 34.3 bits (75), Expect = 1.4
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +1
Query: 73 ARLS*SRITTKVPPTSRTGMLSSLVSTGTPGKCTRGWERIKSTRGPR 213
+R S + TT+ +SRTG + S +C R WER++ T GPR
Sbjct: 185 SRSSCATWTTRTSSSSRTG----IASAAKRWRCARAWERMRWTSGPR 227
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 33.9 bits (74), Expect = 1.9
Identities = 11/36 (30%), Positives = 25/36 (69%)
Frame = +3
Query: 3 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGT 110
P K+ + PG V+++L+GR+ G++ + +K+ ++ T
Sbjct: 27 PQKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDNT 62
>UniRef50_Q3ELB5 Cluster: Cell surface protein; n=1; Bacillus
thuringiensis serovar israelensis ATCC 35646|Rep: Cell
surface protein - Bacillus thuringiensis serovar
israelensis ATCC 35646
Length = 79
Score = 33.1 bits (72), Expect = 3.3
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = -2
Query: 257 LHQVIIVYNLHERLYLGPLVDFILSHPLVHFPGVPVDTSDE 135
+H +++++LH+ ++ G L F + + PG P T+DE
Sbjct: 8 IHWDLVLHHLHQVIFFGTLAVFTTVNTALQVPGFPAGTTDE 48
>UniRef50_Q1YQZ7 Cluster: Short chain dehydrogenase family protein;
n=1; gamma proteobacterium HTCC2207|Rep: Short chain
dehydrogenase family protein - gamma proteobacterium
HTCC2207
Length = 282
Score = 33.1 bits (72), Expect = 3.3
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -3
Query: 148 IPATKACPYGLSEVPSS*FLTTIALRPAYRPLKTSTTLPGFIILPILEG 2
IP+T A PY S+ + + YR ++ S PG I PIL G
Sbjct: 151 IPSTNAVPYSTSKFAVVGLSQALRIEAEYRGVRVSALCPGAIQTPILTG 199
>UniRef50_Q02BB6 Cluster: Putative uncharacterized protein; n=1;
Solibacter usitatus Ellin6076|Rep: Putative
uncharacterized protein - Solibacter usitatus (strain
Ellin6076)
Length = 192
Score = 33.1 bits (72), Expect = 3.3
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +2
Query: 74 QGYRSQELRRRYLRQAVRACFRRWYRQVPPESAQEDGKE*NPQEVQDKAFREGCK 238
Q Y ++ R+RY Q RA R+W R+ E +E + Q + +RE K
Sbjct: 49 QRYPPRQARQRYCSQGCRAAARKWSRRKAQERYRETAAGQQKRNGQSRRYRERVK 103
>UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3;
Oenothera|Rep: Putative membrane protein ycf1 - Oenothera
hookeri (Hooker's evening primrose)
Length = 2434
Score = 33.1 bits (72), Expect = 3.3
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2
Query: 248 LDATRYTVDFS-FEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKW 391
LD RY + + +F K+LKD + ++L F+++++ + SGKN+W
Sbjct: 1629 LDKLRYVLQYDGTSRFLKKELKDYFEAQEL-FHSKLKHKNSLNSGKNQW 1676
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 32.7 bits (71), Expect = 4.3
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +3
Query: 3 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 107
P+K+ +K G +V++L+G + G + +V+K D G
Sbjct: 65 PTKLRPSIKSGTIVILLAGVFRGSRVVVLKQLDSG 99
>UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17;
Eukaryota|Rep: 60S ribosomal protein L6 - Oryza sativa
(Rice)
Length = 222
Score = 32.7 bits (71), Expect = 4.3
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +3
Query: 3 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 107
P+K+ + PG V+++L+GR+ G++ + +K G
Sbjct: 71 PTKLRSSITPGTVLILLAGRFMGKRVVFLKQLKSG 105
>UniRef50_A7Q8E5 Cluster: Chromosome chr5 scaffold_64, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr5 scaffold_64, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1272
Score = 32.7 bits (71), Expect = 4.3
Identities = 21/73 (28%), Positives = 40/73 (54%)
Frame = -2
Query: 383 SSHFCTSLQNVLAC*NAASYVLQGLSGLLR*IFQS*SQLYNVLHQVIIVYNLHERLYLGP 204
SS +S Q + C + + + Q LSGLL+ +++ +++ ++ L + L GP
Sbjct: 428 SSQASSSQQAEIPC-SLGAGLFQELSGLLQRCLCQQAKVKEIMYHGLVKLVLVDPLTAGP 486
Query: 203 LVDFILSHPLVHF 165
++DF+L H +HF
Sbjct: 487 VLDFLLPH-FLHF 498
>UniRef50_Q54LS5 Cluster: Putative uncharacterized protein; n=5;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1693
Score = 32.7 bits (71), Expect = 4.3
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3
Query: 114 DKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMQHVIQLTS 278
D + + F GI P ++ +G HK + F+ + NYN +Q IQL++
Sbjct: 1051 DPSHIYPFPLGISEIPININSNIGFTLYHKIERPPSFINLSNYNDSLQVRIQLSN 1105
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 32.7 bits (71), Expect = 4.3
Identities = 13/35 (37%), Positives = 25/35 (71%)
Frame = +3
Query: 3 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 107
P+ + KI+ PG+V+++LSGR+ G++ + +K G
Sbjct: 52 PATLRKIV-PGQVLILLSGRFQGKRVVFLKQLKSG 85
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 32.7 bits (71), Expect = 4.3
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +3
Query: 3 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 107
P+K+ + PG V+++L+GR+ G++ + +K G
Sbjct: 82 PAKLRASITPGTVLIILAGRFKGKRVVFLKQLASG 116
>UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14;
Archaea|Rep: 50S ribosomal protein L14e - Pyrobaculum
aerophilum
Length = 103
Score = 32.7 bits (71), Expect = 4.3
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +3
Query: 12 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDE 104
M K++ G+VV+ + GR AGRKA+VV DE
Sbjct: 1 MVKVIDIGRVVVKVLGREAGRKAVVVDIVDE 31
>UniRef50_Q8PSL5 Cluster: Putative uncharacterized protein; n=1;
Methanosarcina mazei|Rep: Putative uncharacterized
protein - Methanosarcina mazei (Methanosarcina frisia)
Length = 1110
Score = 32.3 bits (70), Expect = 5.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 275 FSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKS 376
FSFE+F A +PA R +RF R R E +S
Sbjct: 459 FSFERFGATGTGEPALRGSVRFTLRFRMSEETES 492
>UniRef50_Q9AXC5 Cluster: Putative uncharacterized protein; n=1;
Antirrhinum hispanicum|Rep: Putative uncharacterized
protein - Antirrhinum hispanicum (Snapdragon)
Length = 1299
Score = 31.9 bits (69), Expect = 7.5
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -1
Query: 336 RSFLRFAGSFRSFALNFSKLKSTV*RVASSDYSLQPSRKA 217
RSFL AG +R F +FSKL + + R+ ++ Q KA
Sbjct: 779 RSFLGLAGYYRRFVKDFSKLSAPLTRLTQNNQPFQWDEKA 818
>UniRef50_Q6YTT4 Cluster: Proliferating-cell nucleolar antigen-like
protein; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Proliferating-cell nucleolar
antigen-like protein - Oryza sativa subsp. japonica
(Rice)
Length = 812
Score = 31.9 bits (69), Expect = 7.5
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 62 VRGSQGYRSQELRRRYLRQAVRACFRRWYRQVPPESAQ--EDGKE*NPQEVQDKAFRE 229
V G+ G + ++RR+L QA+ + +R R PP +A E + P +++ AF E
Sbjct: 24 VAGAGGRKRGRVQRRHLTQALESFWRHAPRPAPPAAAARGEANRSWQPPPLENPAFEE 81
>UniRef50_A2YWD8 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 662
Score = 31.9 bits (69), Expect = 7.5
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 62 VRGSQGYRSQELRRRYLRQAVRACFRRWYRQVPPESAQ--EDGKE*NPQEVQDKAFRE 229
V G+ G + ++RR+L QA+ + +R R PP +A E + P +++ AF E
Sbjct: 24 VAGAGGRKRGRVQRRHLTQALESFWRHAPRPAPPAAAARGEANRSWQPPPLENPAFEE 81
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 31.9 bits (69), Expect = 7.5
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = +3
Query: 30 PGKVVLVLSGRYAGRKAIVVKNYDEG 107
PG V+++L+GR+ G++ +++K D+G
Sbjct: 41 PGTVLILLAGRFRGKRVVLLKALDQG 66
>UniRef50_Q4UHL2 Cluster: Protein kinase, putative; n=3;
Piroplasmida|Rep: Protein kinase, putative - Theileria
annulata
Length = 709
Score = 31.5 bits (68), Expect = 10.0
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 231 VVNYNHLMQHVIQLTSALKNSAQKT*KTLQNVRS 332
++NY HL+ IQ S + NS T T+ NV S
Sbjct: 343 LINYRHLIYKFIQSNSNINNSLDNTINTVNNVNS 376
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 31.5 bits (68), Expect = 10.0
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +3
Query: 18 KIMKPGKVVLVLSGRYAGRKAIVVK 92
K PG + ++L+GR+ GR+A+++K
Sbjct: 31 KSCAPGAIAIILAGRFRGRRAVILK 55
>UniRef50_O15595 Cluster: 60S ribosomal protein L6; n=5; Entamoeba
histolytica|Rep: 60S ribosomal protein L6 - Entamoeba
histolytica
Length = 92
Score = 31.5 bits (68), Expect = 10.0
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 9 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKP 122
K+ K + PG +++++ G+YAG+K VV +G S P
Sbjct: 53 KLRKSIVPGAILIIVGGKYAGKK--VVSLPSQGVSSAP 88
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 440,730,784
Number of Sequences: 1657284
Number of extensions: 8381991
Number of successful extensions: 26574
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 25898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26564
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26870548160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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