Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30004
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P18077 Cluster: 60S ribosomal protein L35a; n=47; Eutel... 106 3e-22
UniRef50_UPI0001552EFF Cluster: PREDICTED: similar to ribosomal ... 103 2e-21
UniRef50_Q86E43 Cluster: Clone ZZZ247 mRNA sequence; n=4; Eukary... 103 2e-21
UniRef50_Q9VNB9 Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-... 101 8e-21
UniRef50_Q0PXZ5 Cluster: Putative ribosomal protein L35Ae; n=1; ... 93 5e-18
UniRef50_P49180 Cluster: 60S ribosomal protein L35a; n=4; Eukary... 84 2e-15
UniRef50_Q8W1C9 Cluster: Ribosomal protein L35A; n=13; Eukaryota... 83 4e-15
UniRef50_Q8I7D7 Cluster: Putative 60S ribosomal protein L35a; n=... 76 4e-13
UniRef50_Q4WX73 Cluster: 60S ribosomal protein L35Ae; n=4; Peziz... 76 6e-13
UniRef50_P41056 Cluster: 60S ribosomal protein L33-B; n=42; Euka... 74 2e-12
UniRef50_Q4QHL3 Cluster: Ribosomal protein l35a, putative; n=6; ... 70 4e-11
UniRef50_A4S1R2 Cluster: Ribosomal protein L35a, component of cy... 69 9e-11
UniRef50_A5K584 Cluster: 60S ribosomal protein L33-B, putative; ... 69 9e-11
UniRef50_Q5KFG9 Cluster: 60s ribosomal protein l33-b, putative; ... 69 9e-11
UniRef50_A2DSF3 Cluster: Ribosomal protein L35Ae, putative; n=4;... 66 5e-10
UniRef50_Q5GAS3 Cluster: Rpl35A; n=1; Zea mays|Rep: Rpl35A - Zea... 66 6e-10
UniRef50_A0CFU8 Cluster: Chromosome undetermined scaffold_177, w... 60 2e-08
UniRef50_UPI0000D9A2D5 Cluster: PREDICTED: similar to ribosomal ... 59 5e-08
UniRef50_Q7QXX7 Cluster: GLP_479_47445_47074; n=1; Giardia lambl... 58 1e-07
UniRef50_Q55BN7 Cluster: Ribosomal protein L35a; n=1; Dictyostel... 58 1e-07
UniRef50_A6R3W0 Cluster: Putative uncharacterized protein; n=2; ... 43 0.004
UniRef50_Q8SSF3 Cluster: 60S RIBOSOMAL PROTEIN L35A; n=1; Enceph... 42 0.011
UniRef50_Q9V1P2 Cluster: 50S ribosomal protein L35Ae; n=5; Therm... 41 0.015
UniRef50_Q012X7 Cluster: Phytoene/squalene synthetase; n=2; Ostr... 41 0.020
UniRef50_Q8TYY6 Cluster: 50S ribosomal protein L35Ae; n=2; Archa... 40 0.035
UniRef50_A1RX00 Cluster: Ribosomal protein L35Ae; n=1; Thermofil... 39 0.080
UniRef50_A5BSA9 Cluster: Putative uncharacterized protein; n=1; ... 38 0.14
UniRef50_A2BL64 Cluster: 50S ribosomal protein L35Ae; n=2; Desul... 37 0.32
UniRef50_Q1ERA3 Cluster: ATP-dependent RNA helicase; n=1; uncult... 34 1.7
UniRef50_Q7U4A8 Cluster: Putative uncharacterized protein; n=1; ... 33 5.2
UniRef50_A4ALM4 Cluster: Phage-related integrase; n=1; marine ac... 33 5.2
UniRef50_Q5QXQ3 Cluster: Uncharacterized conserved membrane prot... 32 6.9
UniRef50_A3TKF8 Cluster: Putative uncharacterized protein; n=1; ... 32 6.9
UniRef50_UPI0000DA3A09 Cluster: PREDICTED: similar to ribosomal ... 32 9.2
UniRef50_Q0VN96 Cluster: Putative uncharacterized protein; n=1; ... 32 9.2
UniRef50_A3U2M0 Cluster: Putative lipid A biosynthesis lauroyl a... 32 9.2
UniRef50_A3LUL3 Cluster: Protein involved in processes affecting... 32 9.2
>UniRef50_P18077 Cluster: 60S ribosomal protein L35a; n=47;
Euteleostomi|Rep: 60S ribosomal protein L35a - Homo
sapiens (Human)
Length = 110
Score = 106 bits (255), Expect = 3e-22
Identities = 50/69 (72%), Positives = 54/69 (78%)
Frame = +3
Query: 255 KHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 434
K C YVY+AK T PGG K K R IWGKVTR HGNSG VRAKF+SNLPA+A+GHRI
Sbjct: 45 KRCAYVYKAKNNTVTPGG---KPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRI 101
Query: 435 RVMLYPSRI 461
RVMLYPSRI
Sbjct: 102 RVMLYPSRI 110
Score = 63.3 bits (147), Expect = 3e-09
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = +1
Query: 130 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAG 255
GRL++KA+F GYKRGLRNQ E+TALLK+EG R++ FY G
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLG 44
>UniRef50_UPI0001552EFF Cluster: PREDICTED: similar to ribosomal
protein L35a; n=7; Euarchontoglires|Rep: PREDICTED:
similar to ribosomal protein L35a - Mus musculus
Length = 86
Score = 103 bits (247), Expect = 2e-21
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3
Query: 255 KHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 434
K C YVY+AK T PGG K K R IWGKVTR HGNS VRAKF+SNLPA+A+GHRI
Sbjct: 21 KRCAYVYKAKNNTMTPGG---KLNKTRMIWGKVTRAHGNSSMVRAKFRSNLPAKAIGHRI 77
Query: 435 RVMLYPSRI 461
RVMLYPSRI
Sbjct: 78 RVMLYPSRI 86
>UniRef50_Q86E43 Cluster: Clone ZZZ247 mRNA sequence; n=4;
Eukaryota|Rep: Clone ZZZ247 mRNA sequence - Schistosoma
japonicum (Blood fluke)
Length = 128
Score = 103 bits (247), Expect = 2e-21
Identities = 48/69 (69%), Positives = 54/69 (78%)
Frame = +3
Query: 255 KHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 434
K CVYVYRA+K+ P R K TK+R IWGK+ RPHGNSG VRA+FK NLPA AMG RI
Sbjct: 62 KRCVYVYRAEKKKVFPR--RQKPTKIRVIWGKIMRPHGNSGIVRARFKHNLPASAMGKRI 119
Query: 435 RVMLYPSRI 461
RVMLYPSR+
Sbjct: 120 RVMLYPSRV 128
Score = 69.7 bits (163), Expect = 4e-11
Identities = 33/69 (47%), Positives = 43/69 (62%)
Frame = +1
Query: 124 RHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGSIASMCTELRRGHQFP 303
R GRLY KA FTGY+RGLRNQHE+TALL+++G +R FY G C + R +
Sbjct: 18 RPGRLYVKATFTGYRRGLRNQHESTALLRIDGVTERKSTEFYLG---KRCVYVYRAEKKK 74
Query: 304 EVPVAKKPS 330
P +KP+
Sbjct: 75 VFPRRQKPT 83
>UniRef50_Q9VNB9 Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-PA
- Drosophila melanogaster (Fruit fly)
Length = 157
Score = 101 bits (243), Expect = 8e-21
Identities = 44/69 (63%), Positives = 56/69 (81%)
Frame = +3
Query: 255 KHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 434
K CVYVY+A+ + +P P +KT++RA+WGKVTR HGN+G+VRA+F NLP AMGHRI
Sbjct: 90 KRCVYVYKAETKKCVPQHPE-RKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHAMGHRI 148
Query: 435 RVMLYPSRI 461
R+MLYPSRI
Sbjct: 149 RIMLYPSRI 157
Score = 75.4 bits (177), Expect = 8e-13
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = +1
Query: 124 RHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAG 255
RHGRL+AKAVFTGYKRGLRNQHEN A+LK+EGA+ + FY G
Sbjct: 46 RHGRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVG 89
>UniRef50_Q0PXZ5 Cluster: Putative ribosomal protein L35Ae; n=1;
Diaphorina citri|Rep: Putative ribosomal protein L35Ae -
Diaphorina citri (Asian citrus psyllid)
Length = 172
Score = 92.7 bits (220), Expect = 5e-18
Identities = 43/69 (62%), Positives = 53/69 (76%)
Frame = +3
Query: 255 KHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 434
K CV++Y+AK + P R K++LRAIWGKVTRPHG+SGSVRAKF NLPA MG ++
Sbjct: 106 KRCVFLYKAKTKELKPHSKR--KSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKV 163
Query: 435 RVMLYPSRI 461
R+MLYPS I
Sbjct: 164 RIMLYPSNI 172
Score = 67.7 bits (158), Expect = 2e-10
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = +1
Query: 109 KASKPRHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAG 255
K + RHGRLYA+A+FTG+KRG RNQH NT+LL +E + DA FY G
Sbjct: 57 KRLRLRHGRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVG 105
>UniRef50_P49180 Cluster: 60S ribosomal protein L35a; n=4;
Eukaryota|Rep: 60S ribosomal protein L35a -
Caenorhabditis elegans
Length = 124
Score = 83.8 bits (198), Expect = 2e-15
Identities = 39/69 (56%), Positives = 49/69 (71%)
Frame = +3
Query: 255 KHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 434
K VY+Y+A +T G T+ RAIWGK+TRPHGN+G+VRAKF N+P A+G RI
Sbjct: 58 KRVVYLYKAHNKTLKTG--HTVATRTRAIWGKITRPHGNAGAVRAKFHHNIPPSALGKRI 115
Query: 435 RVMLYPSRI 461
RV+LYPS I
Sbjct: 116 RVLLYPSNI 124
Score = 70.9 bits (166), Expect = 2e-11
Identities = 32/52 (61%), Positives = 40/52 (76%)
Frame = +1
Query: 100 VLRKASKPRHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAG 255
V R+ S P GRLY KA+FTG+KRGLR Q E+T+LLK+EG ++ DA FYAG
Sbjct: 6 VARRPSAPTTGRLYVKAIFTGFKRGLRTQSEHTSLLKLEGVFNKEDAGFYAG 57
>UniRef50_Q8W1C9 Cluster: Ribosomal protein L35A; n=13;
Eukaryota|Rep: Ribosomal protein L35A - Zea mays (Maize)
Length = 112
Score = 83.0 bits (196), Expect = 4e-15
Identities = 38/69 (55%), Positives = 49/69 (71%)
Frame = +3
Query: 255 KHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 434
K Y+Y+AK ++ +T+ R IWGKVTRPHGNSG VRAKFKSNLP ++MG ++
Sbjct: 52 KRMAYIYKAKTKS--------SETRYRCIWGKVTRPHGNSGVVRAKFKSNLPPESMGRKV 103
Query: 435 RVMLYPSRI 461
RV +YPS I
Sbjct: 104 RVFMYPSSI 112
Score = 46.8 bits (106), Expect = 3e-04
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +1
Query: 133 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAG 255
RLY + GYKR NQ+E T+L+++EG + D +YAG
Sbjct: 11 RLYVRGTILGYKRSKSNQYETTSLVQIEGVNTKEDVAWYAG 51
>UniRef50_Q8I7D7 Cluster: Putative 60S ribosomal protein L35a; n=1;
Ciona intestinalis|Rep: Putative 60S ribosomal protein
L35a - Ciona intestinalis (Transparent sea squirt)
Length = 122
Score = 76.2 bits (179), Expect = 4e-13
Identities = 35/56 (62%), Positives = 42/56 (75%)
Frame = +3
Query: 255 KHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAM 422
K C YVY+AK++T P RG+ K R IWGKVTR HGNSG VRA FK+NLPA+A+
Sbjct: 45 KKCAYVYKAKRKTKTP---RGEPNKTRVIWGKVTRSHGNSGVVRATFKTNLPAKAI 97
Score = 64.9 bits (151), Expect = 1e-09
Identities = 29/57 (50%), Positives = 39/57 (68%)
Frame = +1
Query: 133 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGSIASMCTELRRGHQFP 303
RL+ KAVFTGY RGLRNQHE+TALL++EG ++ D FY G + + +R + P
Sbjct: 4 RLWCKAVFTGYTRGLRNQHEHTALLRIEGVTNKEDTDFYLGKKCAYVYKAKRKTKTP 60
>UniRef50_Q4WX73 Cluster: 60S ribosomal protein L35Ae; n=4;
Pezizomycotina|Rep: 60S ribosomal protein L35Ae -
Aspergillus fumigatus (Sartorya fumigata)
Length = 119
Score = 75.8 bits (178), Expect = 6e-13
Identities = 38/69 (55%), Positives = 47/69 (68%)
Frame = +3
Query: 255 KHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 434
K +VYRAK+ RG + +R IWGKVTRPHGNSG VRA+F+ NLP ++ G +
Sbjct: 59 KKVAFVYRAKREV------RG--SNIRVIWGKVTRPHGNSGVVRAQFRHNLPPKSFGATV 110
Query: 435 RVMLYPSRI 461
RVMLYPS I
Sbjct: 111 RVMLYPSNI 119
>UniRef50_P41056 Cluster: 60S ribosomal protein L33-B; n=42;
Eukaryota|Rep: 60S ribosomal protein L33-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 107
Score = 73.7 bits (173), Expect = 2e-12
Identities = 37/69 (53%), Positives = 45/69 (65%)
Frame = +3
Query: 255 KHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 434
K YVYRA K RG +K+R +WGKVTR HGNSG VRA F++NLPA+ G +
Sbjct: 47 KRIAYVYRASKEV------RG--SKIRVMWGKVTRTHGNSGVVRATFRNNLPAKTFGASV 98
Query: 435 RVMLYPSRI 461
R+ LYPS I
Sbjct: 99 RIFLYPSNI 107
Score = 36.3 bits (80), Expect = 0.43
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 133 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAG 255
RLY K Y+R R + N +L+K+EG +A FY G
Sbjct: 6 RLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQEAQFYLG 46
>UniRef50_Q4QHL3 Cluster: Ribosomal protein l35a, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein l35a, putative -
Leishmania major
Length = 144
Score = 69.7 bits (163), Expect = 4e-11
Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Frame = +3
Query: 255 KHCVYVYRAKK--RTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFK-SNLPAQAMG 425
K YVY KK R +++ RA+WG+VTRPHGN+G +R KF +++PA A+G
Sbjct: 73 KRVCYVYHGKKVKRCVRWSKAPARRSTTRALWGRVTRPHGNAGMMRVKFNGASVPASAIG 132
Query: 426 HRIRVMLYPSRI 461
RIRV LYPS+I
Sbjct: 133 RRIRVYLYPSQI 144
Score = 46.0 bits (104), Expect = 5e-04
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = +1
Query: 133 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAG 255
RLY K GY RGL Q + TAL++VE R DA +Y G
Sbjct: 32 RLYMKGTLAGYTRGLHGQTKQTALVRVENVNTREDATWYVG 72
>UniRef50_A4S1R2 Cluster: Ribosomal protein L35a, component of
cytosolic 80S ribosome and 60S large subunit; n=1;
Ostreococcus lucimarinus CCE9901|Rep: Ribosomal protein
L35a, component of cytosolic 80S ribosome and 60S large
subunit - Ostreococcus lucimarinus CCE9901
Length = 109
Score = 68.5 bits (160), Expect = 9e-11
Identities = 35/69 (50%), Positives = 44/69 (63%)
Frame = +3
Query: 255 KHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 434
K YVY+AK + + T R IWGKV R HG SG VRAKFKS+LP+ ++G ++
Sbjct: 49 KKLCYVYKAKTKK--------QGTAYRTIWGKVMRAHGTSGVVRAKFKSHLPSNSIGGKV 100
Query: 435 RVMLYPSRI 461
R MLYPS I
Sbjct: 101 RCMLYPSNI 109
Score = 45.6 bits (103), Expect = 7e-04
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +1
Query: 133 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAG 255
RLY + + GYKR NQ+ +T+L+K+EG D FY G
Sbjct: 8 RLYVRGLILGYKRARTNQYNHTSLIKLEGVSDAPSTAFYGG 48
>UniRef50_A5K584 Cluster: 60S ribosomal protein L33-B, putative;
n=5; Plasmodium|Rep: 60S ribosomal protein L33-B,
putative - Plasmodium vivax
Length = 146
Score = 68.5 bits (160), Expect = 9e-11
Identities = 31/69 (44%), Positives = 43/69 (62%)
Frame = +3
Query: 255 KHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 434
K YVYR K K++ IWGKV R HGNSG +RA+F++N+P +A G R+
Sbjct: 86 KKIAYVYRTNKHHD--------GVKIKCIWGKVCRTHGNSGVIRARFRTNIPPKAFGDRV 137
Query: 435 RVMLYPSRI 461
R+++YPS I
Sbjct: 138 RILMYPSNI 146
Score = 40.7 bits (91), Expect = 0.020
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +1
Query: 133 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAG 255
RLY K V GYKR RNQ N L+ + + A FY G
Sbjct: 45 RLYEKGVILGYKRSQRNQDPNFTLISIRNVHTKKHAQFYVG 85
>UniRef50_Q5KFG9 Cluster: 60s ribosomal protein l33-b, putative;
n=2; Filobasidiella neoformans|Rep: 60s ribosomal
protein l33-b, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 178
Score = 68.5 bits (160), Expect = 9e-11
Identities = 32/69 (46%), Positives = 48/69 (69%)
Frame = +3
Query: 255 KHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 434
K YVY+AK+ I G +++R IWG+++R HGNSG+V++KF++NLPA+ G
Sbjct: 118 KRVAYVYKAKRE--ING------SRVRVIWGRISRSHGNSGAVKSKFRTNLPAKTFGASC 169
Query: 435 RVMLYPSRI 461
R+ML+PS I
Sbjct: 170 RIMLFPSNI 178
Score = 40.3 bits (90), Expect = 0.026
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +1
Query: 133 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGSIASMCTELRR 288
RLY K G+KRG RN N +LL++EG ++ A Y G + + +R
Sbjct: 77 RLYIKGRILGHKRGKRNSRPNQSLLQIEGVDNKEAAGHYLGKRVAYVYKAKR 128
>UniRef50_A2DSF3 Cluster: Ribosomal protein L35Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L35Ae,
putative - Trichomonas vaginalis G3
Length = 102
Score = 66.1 bits (154), Expect = 5e-10
Identities = 27/40 (67%), Positives = 33/40 (82%)
Frame = +3
Query: 342 WGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 461
WG +T+PHGNSG VRAKF+ NLP Q +G ++RVMLYPS I
Sbjct: 63 WGVITQPHGNSGVVRAKFEKNLPPQMLGKQVRVMLYPSTI 102
Score = 36.3 bits (80), Expect = 0.43
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 133 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAG-SIASM 270
+L+ A F ++R R N ALL+++G + +A FYAG +AS+
Sbjct: 6 KLFVPATFVSFRRSKRIIKPNQALLEIQGVVSKEEAQFYAGKKVASV 52
>UniRef50_Q5GAS3 Cluster: Rpl35A; n=1; Zea mays|Rep: Rpl35A - Zea
mays (Maize)
Length = 139
Score = 65.7 bits (153), Expect = 6e-10
Identities = 31/56 (55%), Positives = 39/56 (69%)
Frame = +3
Query: 255 KHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAM 422
K Y+Y+AK ++ +T+ R IWGKVTRPHGNSG VRAKFKSNLP ++M
Sbjct: 72 KRMAYIYKAKTKS--------SETRYRCIWGKVTRPHGNSGVVRAKFKSNLPPESM 119
Score = 32.7 bits (71), Expect = 5.2
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 169 RGLRNQHENTALLKVEGAKDRNDAVFYAG 255
R NQ+E T+L+++EG + D +YAG
Sbjct: 43 RSKSNQYETTSLVQIEGVNTKEDVAWYAG 71
>UniRef50_A0CFU8 Cluster: Chromosome undetermined scaffold_177,
whole genome shotgun sequence; n=9; Eukaryota|Rep:
Chromosome undetermined scaffold_177, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 129
Score = 60.5 bits (140), Expect = 2e-08
Identities = 24/45 (53%), Positives = 35/45 (77%)
Frame = +3
Query: 324 TKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSR 458
TK RAIWG++++ HG++G V A+F NLP +A+G +RV LYP+R
Sbjct: 84 TKFRAIWGRISKSHGSNGVVTARFGRNLPPRAIGSTLRVFLYPNR 128
Score = 44.4 bits (100), Expect = 0.002
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +1
Query: 133 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAG 255
RL+ KAVFTG++R Q+EN ALLK+E D + FY G
Sbjct: 28 RLWVKAVFTGFRRSKVQQNENQALLKIEHVNDVASSRFYWG 68
>UniRef50_UPI0000D9A2D5 Cluster: PREDICTED: similar to ribosomal
protein L35a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein L35a - Macaca mulatta
Length = 80
Score = 59.3 bits (137), Expect = 5e-08
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = +3
Query: 357 RPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 461
+ HGNSG VRAKF+SNLPA+A+GH I+VMLYPS I
Sbjct: 46 KAHGNSGMVRAKFQSNLPAKAIGHGIQVMLYPSSI 80
Score = 53.6 bits (123), Expect = 3e-06
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +1
Query: 130 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFY 249
GRL++KAVF GYKRG RNQ E+TALLK+E ++ FY
Sbjct: 3 GRLWSKAVFAGYKRGPRNQREHTALLKIEAVYAGDETEFY 42
>UniRef50_Q7QXX7 Cluster: GLP_479_47445_47074; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_479_47445_47074 - Giardia lamblia
ATCC 50803
Length = 123
Score = 58.0 bits (134), Expect = 1e-07
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +3
Query: 333 RAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRV 440
+ I+GK+ RPHGNSG VRA+F +NLP Q MGH++RV
Sbjct: 59 KPIFGKICRPHGNSGMVRARFYTNLPGQLMGHKVRV 94
Score = 35.5 bits (78), Expect = 0.74
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +1
Query: 130 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDR 231
G+ + A+F GY+R Q EN AL+KV G R
Sbjct: 6 GKTFLPAIFVGYQRSRAKQRENVALVKVSGIYTR 39
>UniRef50_Q55BN7 Cluster: Ribosomal protein L35a; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L35a -
Dictyostelium discoideum AX4
Length = 105
Score = 58.0 bits (134), Expect = 1e-07
Identities = 24/40 (60%), Positives = 31/40 (77%)
Frame = +3
Query: 342 WGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 461
WGK+ + HG+SG V+A+F NLP +AMG +RVMLYPS I
Sbjct: 66 WGKICKTHGSSGVVQARFARNLPPKAMGAPVRVMLYPSNI 105
Score = 46.4 bits (105), Expect = 4e-04
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +1
Query: 133 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGSIASMCTELRRGHQFP 303
++Y+K V GY+R Q+ N +L+K+EG R D+ FY G + +++ + + P
Sbjct: 3 KIYSKGVVLGYRRSQATQYPNISLIKIEGVVSREDSTFYLGKKVCLVSKVSKSAKNP 59
>UniRef50_A6R3W0 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Ajellomyces capsulatus NAm1
Length = 102
Score = 43.2 bits (97), Expect = 0.004
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 127 HG-RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGSIASMCTELRRGHQFP 303
HG RLY K Y+RG R + NT+L+K+EG +D A FY G + +R Q
Sbjct: 5 HGHRLYVKGRHLSYQRGKRATNPNTSLIKLEGVEDIKAANFYLGKKVAFVYRAKREVQGS 64
Query: 304 EVPV 315
++ V
Sbjct: 65 KIRV 68
Score = 35.9 bits (79), Expect = 0.56
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Frame = +3
Query: 255 KHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSG----SVRAKFKSNLPA 413
K +VYRAK+ + +K+R IWGKVTR HG G +++ +F S P+
Sbjct: 49 KKVAFVYRAKREV--------QGSKIRVIWGKVTRTHGQLGRCPCAIQTQFFSQSPS 97
>UniRef50_Q8SSF3 Cluster: 60S RIBOSOMAL PROTEIN L35A; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L35A
- Encephalitozoon cuniculi
Length = 113
Score = 41.5 bits (93), Expect = 0.011
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +3
Query: 339 IWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLY 449
+ G +TR HGNSG+VRA+F NL + +G + V LY
Sbjct: 70 VHGVITRIHGNSGAVRARFTRNLDPKLLGTHVFVKLY 106
Score = 33.9 bits (74), Expect = 2.3
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +1
Query: 148 AVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGSIASMCTELRRGHQFP 303
A F +KRG R H LLK+ +++A Y G+ + G ++P
Sbjct: 18 ATFVSFKRGQRRLHPRHVLLKIRNVTSKDEASSYVGNGVVCYKKNNEGERYP 69
>UniRef50_Q9V1P2 Cluster: 50S ribosomal protein L35Ae; n=5;
Thermococcaceae|Rep: 50S ribosomal protein L35Ae -
Pyrococcus abyssi
Length = 87
Score = 41.1 bits (92), Expect = 0.015
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +3
Query: 345 GKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVM 443
GK+ R HG G+VRA+F+ LP QA+G + ++
Sbjct: 55 GKIVRVHGTKGAVRARFEKGLPGQALGDYVEII 87
>UniRef50_Q012X7 Cluster: Phytoene/squalene synthetase; n=2;
Ostreococcus|Rep: Phytoene/squalene synthetase -
Ostreococcus tauri
Length = 437
Score = 40.7 bits (91), Expect = 0.020
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = -1
Query: 464 LDPGRIQHHSYSVSHSLGREVRLELGSDTARVAMWAGHLAPDSTQ 330
LD GR++H S+ + +GR+V LELG A + HLAPD ++
Sbjct: 332 LDVGRVKHASHLTADRVGRQVLLELGPHDAARPVRPSHLAPDRSE 376
>UniRef50_Q8TYY6 Cluster: 50S ribosomal protein L35Ae; n=2;
Archaea|Rep: 50S ribosomal protein L35Ae - Methanopyrus
kandleri
Length = 90
Score = 39.9 bits (89), Expect = 0.035
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 333 RAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 434
+ I GKV HGN+G+VR +F+ LP QA+G +
Sbjct: 54 KVIRGKVVDTHGNNGAVRVRFERGLPGQALGTEV 87
>UniRef50_A1RX00 Cluster: Ribosomal protein L35Ae; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L35Ae - Thermofilum
pendens (strain Hrk 5)
Length = 85
Score = 38.7 bits (86), Expect = 0.080
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +3
Query: 345 GKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVM 443
GK+ R HG G V A FK +LP QA+G +++++
Sbjct: 53 GKIVRMHGRRGHVLAYFKRHLPGQAVGTKVKIV 85
>UniRef50_A5BSA9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 225
Score = 37.9 bits (84), Expect = 0.14
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = -1
Query: 422 HSLGREVRLELGSDTARVAMWAGHLAPDSTQL 327
H LGR++ LELGSD V + +G LAP +T++
Sbjct: 60 HGLGRQIGLELGSDNTTVTVRSGDLAPXATKV 91
>UniRef50_A2BL64 Cluster: 50S ribosomal protein L35Ae; n=2;
Desulfurococcales|Rep: 50S ribosomal protein L35Ae -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 106
Score = 36.7 bits (81), Expect = 0.32
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = +3
Query: 345 GKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 461
GK+ HG+ G V A FK NLP QA G V +YP I
Sbjct: 61 GKIVHVHGSKGVVIAVFKPNLPGQARGG--NVYIYPKGI 97
>UniRef50_Q1ERA3 Cluster: ATP-dependent RNA helicase; n=1;
uncultured crenarchaeote 31-F-01|Rep: ATP-dependent RNA
helicase - uncultured crenarchaeote 31-F-01
Length = 589
Score = 34.3 bits (75), Expect = 1.7
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 146 RPYSQDISVVYATSTRTPLSSRLKEQKTVMMQSFMLEALRLCVQS 280
RPY QD + + T T TP+ R++E +QS + E RL V S
Sbjct: 241 RPYIQDTKIEFVTITLTPVMRRIREHVERALQSRLEELKRLGVIS 285
>UniRef50_Q7U4A8 Cluster: Putative uncharacterized protein; n=1;
Synechococcus sp. WH 8102|Rep: Putative uncharacterized
protein - Synechococcus sp. (strain WH8102)
Length = 253
Score = 32.7 bits (71), Expect = 5.2
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +1
Query: 127 HGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGSIASMCTELRRG 291
HGR + G + L++ TALL + R D +F +G+ +MC + +G
Sbjct: 138 HGRFRGGRLMPGLRLQLQSMASGTALLPSVARQQRTDDLFPSGTAEAMCQGVMQG 192
>UniRef50_A4ALM4 Cluster: Phage-related integrase; n=1; marine
actinobacterium PHSC20C1|Rep: Phage-related integrase -
marine actinobacterium PHSC20C1
Length = 333
Score = 32.7 bits (71), Expect = 5.2
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = -1
Query: 452 RIQHHS-YSVSHSLGREVRLELGSDTARVAMWAGHLAPDSTQ 330
R QH S +++ H+ + L+ G+D A +A+W GH +P +TQ
Sbjct: 253 RGQHISPHTLRHATAMHL-LQSGTDLATIALWLGHSSPATTQ 293
>UniRef50_Q5QXQ3 Cluster: Uncharacterized conserved membrane
protein; n=3; Gammaproteobacteria|Rep: Uncharacterized
conserved membrane protein - Idiomarina loihiensis
Length = 345
Score = 32.3 bits (70), Expect = 6.9
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +3
Query: 252 WKHCVYVYRAKKRTPIPGGPRGKKTKLRA--IWGKVTRPHGNSGSVRAKFKSNLPAQAMG 425
WK V KK P GP K+ K +WG+++ GN S+R K K+ A G
Sbjct: 252 WKW-VQAKLKKKLESQPAGPEEKERKNNPTYVWGEISDAKGNKKSMRVKVKNGYSLTAEG 310
>UniRef50_A3TKF8 Cluster: Putative uncharacterized protein; n=1;
Janibacter sp. HTCC2649|Rep: Putative uncharacterized
protein - Janibacter sp. HTCC2649
Length = 255
Score = 32.3 bits (70), Expect = 6.9
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = -1
Query: 461 DPGRIQHHSYSVSHSLGREVRLELGSDTARVAMWAGHLAPDSTQLGFFATGTSGN-WCPL 285
D GR+ S VS + G E+RLE+ + V + + QL FA SG W +
Sbjct: 57 DDGRLDLGSLRVSGTEGMELRLEIDQEQQNVIAATAVVGESALQLQAFAAPRSGGLWAEI 116
Query: 284 LSSVHI 267
S + +
Sbjct: 117 RSEIAV 122
>UniRef50_UPI0000DA3A09 Cluster: PREDICTED: similar to ribosomal
protein L35a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L35a - Rattus norvegicus
Length = 106
Score = 31.9 bits (69), Expect = 9.2
Identities = 20/47 (42%), Positives = 23/47 (48%)
Frame = +3
Query: 255 KHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKF 395
K C YVY+AK PG GK K R + GK P +G AKF
Sbjct: 65 KRCAYVYKAKISAVTPG---GKTNKTRVVRGKQLGP--RNGLFCAKF 106
>UniRef50_Q0VN96 Cluster: Putative uncharacterized protein; n=1;
Alcanivorax borkumensis SK2|Rep: Putative
uncharacterized protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 204
Score = 31.9 bits (69), Expect = 9.2
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -1
Query: 410 REVRLELGSDTARVAMWAGHLAPDSTQLGFFAT 312
++VRL LG DT RV H AP +T+L F T
Sbjct: 94 KQVRLALGEDTQRVRRVILHTAPANTELQTFLT 126
>UniRef50_A3U2M0 Cluster: Putative lipid A biosynthesis lauroyl
acyltransferase; n=1; Oceanicola batsensis HTCC2597|Rep:
Putative lipid A biosynthesis lauroyl acyltransferase -
Oceanicola batsensis HTCC2597
Length = 304
Score = 31.9 bits (69), Expect = 9.2
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -2
Query: 457 LEGYSITRILCPIA-WAGRLDLNLARTLPELP 365
L G+ ++RI+ P+A W R+ NLA P+LP
Sbjct: 40 LAGWLVSRIVAPLAGWRRRIRTNLAHAWPDLP 71
>UniRef50_A3LUL3 Cluster: Protein involved in processes affecting
the actin cytoskeleton and mitosis; n=1; Pichia
stipitis|Rep: Protein involved in processes affecting
the actin cytoskeleton and mitosis - Pichia stipitis
(Yeast)
Length = 1192
Score = 31.9 bits (69), Expect = 9.2
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 178 RNQHENTALLKVEG-AKDRNDAVFYAGSIASMCTELRR 288
R Q EN L+ E +KD NDA+ + GS MC R
Sbjct: 164 RKQMENLGLVDAENISKDLNDAISFQGSCLDMCPVFER 201
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 495,063,712
Number of Sequences: 1657284
Number of extensions: 10487006
Number of successful extensions: 28356
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 27569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28344
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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