Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10499
(573 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VXE0 Cluster: Probable small nuclear ribonucleoprotei... 95 1e-18
UniRef50_P62308 Cluster: Small nuclear ribonucleoprotein G; n=46... 89 5e-17
UniRef50_Q9N4G9 Cluster: Probable small nuclear ribonucleoprotei... 82 8e-15
UniRef50_Q4PED8 Cluster: Putative uncharacterized protein; n=1; ... 64 2e-09
UniRef50_O74966 Cluster: Probable small nuclear ribonucleoprotei... 63 4e-09
UniRef50_Q54RX0 Cluster: LSM (Like-Sm) domain-containing protein... 61 2e-08
UniRef50_Q00XA2 Cluster: Putative small nuclear ribonucleoprotei... 60 5e-08
UniRef50_Q8IB57 Cluster: Small nuclear ribonucleoprotein, putati... 59 6e-08
UniRef50_Q7SDP3 Cluster: Putative uncharacterized protein NCU019... 56 8e-07
UniRef50_A7TGG5 Cluster: Putative uncharacterized protein; n=1; ... 56 8e-07
UniRef50_Q677D4 Cluster: Small nuclear ribonucleoprotein polypep... 55 1e-06
UniRef50_A7QWV4 Cluster: Chromosome chr13 scaffold_210, whole ge... 54 2e-06
UniRef50_Q5CY65 Cluster: Putative uncharacterized protein; n=1; ... 54 3e-06
UniRef50_Q6MY59 Cluster: U6 snrna-associated sm-like protein, pu... 53 4e-06
UniRef50_A4S1J9 Cluster: Predicted protein; n=2; Ostreococcus|Re... 52 1e-05
UniRef50_Q6CRN4 Cluster: Similar to sp|P40204 Saccharomyces cere... 52 1e-05
UniRef50_UPI0000D9E97B Cluster: PREDICTED: LSM7 homolog, U6 smal... 52 1e-05
UniRef50_Q9UK45 Cluster: U6 snRNA-associated Sm-like protein LSm... 52 1e-05
UniRef50_UPI000049841B Cluster: small nuclear ribonucleoprotein ... 51 2e-05
UniRef50_Q4Q5H5 Cluster: Small nuclear ribonucleoprotein, putati... 51 2e-05
UniRef50_A6QY75 Cluster: Predicted protein; n=2; Fungi/Metazoa g... 51 2e-05
UniRef50_A2R8P2 Cluster: Function: snRPG of H. sapiens is associ... 50 3e-05
UniRef50_P53905 Cluster: U6 snRNA-associated Sm-like protein LSm... 50 3e-05
UniRef50_Q5K900 Cluster: U6 snRNA binding protein, putative; n=1... 50 4e-05
UniRef50_A0D0Y9 Cluster: Chromosome undetermined scaffold_33, wh... 48 2e-04
UniRef50_Q2URY1 Cluster: Predicted protein; n=1; Aspergillus ory... 48 2e-04
UniRef50_Q4MYV9 Cluster: U6 snRNA-associated protein, putative; ... 46 5e-04
UniRef50_O74499 Cluster: U6 snRNP-associated protein Lsm7; n=19;... 46 5e-04
UniRef50_A2GMH6 Cluster: Sm protein; n=3; Trichomonas vaginalis ... 46 6e-04
UniRef50_Q40942 Cluster: Small nucleolar ribonucleoprotein E hom... 45 0.001
UniRef50_Q6BPZ2 Cluster: Debaryomyces hansenii chromosome E of s... 45 0.001
UniRef50_Q4Z0C4 Cluster: U6 snRNA-associated Sm-like protein, pu... 44 0.003
UniRef50_A2Y859 Cluster: Putative uncharacterized protein; n=2; ... 43 0.004
UniRef50_Q8SRW7 Cluster: SMALL NUCLEAR RIBONUCLEOPROTEIN G; n=1;... 43 0.004
UniRef50_A7PDU1 Cluster: Chromosome chr11 scaffold_13, whole gen... 41 0.018
UniRef50_Q4N4E0 Cluster: Small nuclear ribonucleoprotein G, puta... 41 0.018
UniRef50_A1DH91 Cluster: Small nuclear ribonucleoprotein (LSM1),... 41 0.024
UniRef50_P40018 Cluster: Small nuclear ribonucleoprotein-associa... 41 0.024
UniRef50_Q4PA95 Cluster: Putative uncharacterized protein; n=1; ... 40 0.041
UniRef50_A3LX11 Cluster: Predicted protein; n=3; Saccharomycetac... 40 0.041
UniRef50_Q979R0 Cluster: Small nuclear ribonucleoprotein; n=4; T... 40 0.055
UniRef50_Q54W83 Cluster: Putative uncharacterized protein; n=1; ... 39 0.072
UniRef50_Q755T6 Cluster: AER432Cp; n=1; Eremothecium gossypii|Re... 39 0.072
UniRef50_Q6CGS0 Cluster: Similar to sp|P47017 Saccharomyces cere... 39 0.072
UniRef50_Q5KN63 Cluster: Sm-like protein, putative; n=1; Filobas... 39 0.072
UniRef50_O74483 Cluster: U6 snRNA-associated Sm-like protein LSm... 39 0.096
UniRef50_O95777 Cluster: U6 snRNA-associated Sm-like protein LSm... 39 0.096
UniRef50_A4S5K5 Cluster: Predicted protein; n=1; Ostreococcus lu... 38 0.13
UniRef50_Q20229 Cluster: Putative uncharacterized protein lsm-1;... 38 0.13
UniRef50_Q4V6D7 Cluster: IP05148p; n=2; Drosophila melanogaster|... 38 0.17
UniRef50_A3H6D3 Cluster: Like-Sm ribonucleoprotein, core; n=1; C... 38 0.17
UniRef50_Q6DBW5 Cluster: Zgc:101136; n=6; Euteleostomi|Rep: Zgc:... 38 0.22
UniRef50_Q2FT45 Cluster: Like-Sm ribonucleoprotein, core; n=3; M... 38 0.22
UniRef50_P87173 Cluster: Uncharacterized protein C3D6.08c; n=1; ... 38 0.22
UniRef50_P47017 Cluster: Sm-like protein LSm1; n=11; Saccharomyc... 38 0.22
UniRef50_Q4UHZ4 Cluster: (U6) snRNA-associated Sm-like protein, ... 37 0.29
UniRef50_Q1HQ51 Cluster: LSM1-like protein; n=3; Endopterygota|R... 37 0.29
UniRef50_Q8ZYP8 Cluster: Small nuclear ribonucleoprotein homolog... 37 0.29
UniRef50_Q01J34 Cluster: OSIGBa0140O07.9 protein; n=5; Oryza sat... 37 0.39
UniRef50_Q4Q9J1 Cluster: Lsm7p protein, putative; n=6; Trypanoso... 37 0.39
UniRef50_O75243 Cluster: R30783_1; n=3; Mammalia|Rep: R30783_1 -... 37 0.39
UniRef50_A3DMZ9 Cluster: Like-Sm ribonucleoprotein, core; n=1; S... 37 0.39
UniRef50_P57743 Cluster: U6 snRNA-associated Sm-like protein LSm... 37 0.39
UniRef50_Q025U8 Cluster: Amidohydrolase; n=1; Solibacter usitatu... 36 0.68
UniRef50_Q8TYS2 Cluster: Small nuclear ribonucleoprotein (SnRNP)... 36 0.68
UniRef50_A7DPN6 Cluster: Peptidase S8 and S53, subtilisin, kexin... 36 0.68
UniRef50_P40089 Cluster: U6 snRNA-associated Sm-like protein LSm... 36 0.68
UniRef50_O15116 Cluster: U6 snRNA-associated Sm-like protein LSm... 36 0.68
UniRef50_Q7QZM9 Cluster: GLP_680_47464_47838; n=1; Giardia lambl... 36 0.89
UniRef50_Q6CWY1 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 36 0.89
UniRef50_Q5CQ90 Cluster: Small nuclear ribonucleoprotein U6; n=1... 35 1.2
UniRef50_Q17E06 Cluster: Small nuclear ribonucleoprotein, core, ... 35 1.2
UniRef50_UPI00015B5F11 Cluster: PREDICTED: similar to ribonuclea... 35 1.6
UniRef50_A0D2M7 Cluster: Chromosome undetermined scaffold_35, wh... 35 1.6
UniRef50_Q0UX37 Cluster: Predicted protein; n=1; Phaeosphaeria n... 34 2.1
UniRef50_A7TII8 Cluster: Putative uncharacterized protein; n=1; ... 34 2.1
UniRef50_Q701X8 Cluster: Putative uncharacterized protein; n=1; ... 34 2.1
UniRef50_Q9YEQ5 Cluster: Putative snRNP Sm-like protein; n=1; Ae... 34 2.1
UniRef50_A4VDT4 Cluster: Putative uncharacterized protein; n=1; ... 34 2.7
UniRef50_A1CDT1 Cluster: Small nuclear ribonucleoprotein SmE, pu... 34 2.7
UniRef50_UPI0001560E30 Cluster: PREDICTED: similar to ZNF449; n=... 33 3.6
UniRef50_A2FZR2 Cluster: Sm protein; n=1; Trichomonas vaginalis ... 33 3.6
UniRef50_A0D4X7 Cluster: Chromosome undetermined scaffold_38, wh... 33 3.6
UniRef50_Q4P7M4 Cluster: Putative uncharacterized protein; n=1; ... 33 3.6
UniRef50_Q0ULJ4 Cluster: Putative uncharacterized protein; n=1; ... 33 3.6
UniRef50_Q98S49 Cluster: Small nuclear ribonucleoprotein F; n=1;... 33 4.8
UniRef50_Q8MYW8 Cluster: RE61341p; n=1; Drosophila melanogaster|... 33 4.8
UniRef50_Q8IGW7 Cluster: RE11655p; n=12; Eukaryota|Rep: RE11655p... 33 4.8
UniRef50_A4VCU1 Cluster: Small nuclear ribonucleoprotein E, puta... 33 4.8
UniRef50_Q8SRU9 Cluster: U6 snRNA-ASSOCIATED SMALL RIBONUCLEOPRO... 33 4.8
UniRef50_Q6BQK4 Cluster: Similar to CA3420|CaSMX4 Candida albica... 33 4.8
UniRef50_A7DR38 Cluster: Like-Sm ribonucleoprotein, core; n=1; C... 33 4.8
UniRef50_P57670 Cluster: Putative snRNP Sm-like protein; n=4; Th... 33 4.8
UniRef50_P62312 Cluster: U6 snRNA-associated Sm-like protein LSm... 33 4.8
UniRef50_Q9LMB5 Cluster: F14D16.28; n=6; core eudicotyledons|Rep... 33 6.3
UniRef50_Q74ZR8 Cluster: AGR130Wp; n=2; Saccharomycetales|Rep: A... 33 6.3
UniRef50_Q6FJA6 Cluster: Similar to sp|P47093 Saccharomyces cere... 33 6.3
UniRef50_Q05E36 Cluster: Putative small nucleolar RNP protein Sm... 33 6.3
UniRef50_Q9Y4Y9 Cluster: U6 snRNA-associated Sm-like protein LSm... 33 6.3
UniRef50_Q9VLV1 Cluster: CG14532-PA; n=1; Drosophila melanogaste... 32 8.3
UniRef50_Q7QPB0 Cluster: GLP_122_3813_3433; n=1; Giardia lamblia... 32 8.3
UniRef50_Q4N631 Cluster: Sm protein, putative; n=1; Theileria pa... 32 8.3
UniRef50_Q4MZU2 Cluster: U6 snRNA-associated Sm-like protein LSm... 32 8.3
UniRef50_A2E014 Cluster: Sm protein; n=2; Trichomonas vaginalis ... 32 8.3
UniRef50_A0C1J5 Cluster: Chromosome undetermined scaffold_142, w... 32 8.3
UniRef50_Q9HPS2 Cluster: SnRNP homolog; n=2; Halobacteriaceae|Re... 32 8.3
UniRef50_Q8ZYG5 Cluster: Small nuclear ribonucleoprotein homolog... 32 8.3
UniRef50_O26745 Cluster: Putative snRNP Sm-like protein; n=4; Eu... 32 8.3
>UniRef50_Q9VXE0 Cluster: Probable small nuclear ribonucleoprotein
G; n=14; Eukaryota|Rep: Probable small nuclear
ribonucleoprotein G - Drosophila melanogaster (Fruit
fly)
Length = 76
Score = 95.1 bits (226), Expect = 1e-18
Identities = 40/58 (68%), Positives = 51/58 (87%)
Frame = +3
Query: 108 MSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKTVSVTMLG 281
MSKAHPPE+KK+MDK++ +KLN GRAVTG+LRGFDPFMN+VLD++VEECK + +G
Sbjct: 1 MSKAHPPEVKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKDNTKNNIG 58
Score = 44.8 bits (101), Expect = 0.001
Identities = 18/26 (69%), Positives = 24/26 (92%)
Frame = +2
Query: 257 DGQRNNVGMVVIRGNSIIMLESLDRL 334
D +NN+GMVVIRGNSI+M+E+LDR+
Sbjct: 51 DNTKNNIGMVVIRGNSIVMVEALDRV 76
>UniRef50_P62308 Cluster: Small nuclear ribonucleoprotein G; n=46;
Eukaryota|Rep: Small nuclear ribonucleoprotein G - Homo
sapiens (Human)
Length = 76
Score = 89.4 bits (212), Expect = 5e-17
Identities = 40/47 (85%), Positives = 43/47 (91%)
Frame = +3
Query: 108 MSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
MSKAHPPELKKFMDKKLS+KLN GR V G+LRGFDPFMNLV+DE VE
Sbjct: 1 MSKAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE 47
Score = 46.8 bits (106), Expect = 4e-04
Identities = 20/25 (80%), Positives = 25/25 (100%)
Frame = +2
Query: 260 GQRNNVGMVVIRGNSIIMLESLDRL 334
GQ+NN+GMVVIRGNSIIMLE+L+R+
Sbjct: 52 GQQNNIGMVVIRGNSIIMLEALERV 76
>UniRef50_Q9N4G9 Cluster: Probable small nuclear ribonucleoprotein
G; n=16; Bilateria|Rep: Probable small nuclear
ribonucleoprotein G - Caenorhabditis elegans
Length = 77
Score = 82.2 bits (194), Expect = 8e-15
Identities = 36/58 (62%), Positives = 45/58 (77%)
Frame = +3
Query: 108 MSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKTVSVTMLG 281
MSK HPPELKK+MDK++ +KLN R V+G+LRGFDPFMN+V+DE+VE K LG
Sbjct: 1 MSKTHPPELKKYMDKEMDLKLNGNRRVSGILRGFDPFMNMVIDEAVEYQKDGGSVNLG 58
Score = 33.5 bits (73), Expect = 3.6
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +2
Query: 257 DGQRNNVGMVVIRGNSIIMLESLDRL 334
DG N+GM VIRGNS++++E +R+
Sbjct: 51 DGGSVNLGMTVIRGNSVVIMEPKERI 76
>UniRef50_Q4PED8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 134
Score = 64.1 bits (149), Expect = 2e-09
Identities = 24/48 (50%), Positives = 38/48 (79%)
Frame = +3
Query: 108 MSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEE 251
M+K PELK+F+DK++++ + GR + G LRGFD F+NLV+DE++E+
Sbjct: 48 MAKVSQPELKRFLDKRIAVNIQGGRKIQGTLRGFDMFLNLVVDEAIEQ 95
>UniRef50_O74966 Cluster: Probable small nuclear ribonucleoprotein
G; n=7; Ascomycota|Rep: Probable small nuclear
ribonucleoprotein G - Schizosaccharomyces pombe (Fission
yeast)
Length = 77
Score = 63.3 bits (147), Expect = 4e-09
Identities = 26/48 (54%), Positives = 40/48 (83%)
Frame = +3
Query: 108 MSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEE 251
MSKA P+LKK++D+++ ++LN R V GVLRG+D F+N+VL++S+EE
Sbjct: 1 MSKAGAPDLKKYLDRQVFVQLNGSRKVYGVLRGYDIFLNIVLEDSIEE 48
Score = 37.9 bits (84), Expect = 0.17
Identities = 14/26 (53%), Positives = 22/26 (84%)
Frame = +2
Query: 257 DGQRNNVGMVVIRGNSIIMLESLDRL 334
DG++ +G V IRGNS+IM+E+LD++
Sbjct: 51 DGEKVKIGSVAIRGNSVIMIETLDKM 76
>UniRef50_Q54RX0 Cluster: LSM (Like-Sm) domain-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: LSM (Like-Sm)
domain-containing protein - Dictyostelium discoideum AX4
Length = 85
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/49 (55%), Positives = 35/49 (71%)
Frame = +3
Query: 102 ITMSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
+T K P+L K +DKKL+IKLN R V G+LRGFD FMN+ L ++VE
Sbjct: 1 MTFGKQADPDLTKLLDKKLAIKLNGNRTVHGILRGFDTFMNIALKDTVE 49
>UniRef50_Q00XA2 Cluster: Putative small nuclear ribonucleoprotein
E; n=1; Ostreococcus tauri|Rep: Putative small nuclear
ribonucleoprotein E - Ostreococcus tauri
Length = 101
Score = 59.7 bits (138), Expect = 5e-08
Identities = 25/46 (54%), Positives = 34/46 (73%)
Frame = +3
Query: 138 KFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKTVSVTM 275
++MDKKL ++LN R+VTG+LRGFD F+NLVLD+S + T M
Sbjct: 29 RYMDKKLRLRLNGNRSVTGILRGFDQFLNLVLDDSTNDTTTEKTPM 74
>UniRef50_Q8IB57 Cluster: Small nuclear ribonucleoprotein, putative;
n=8; Eukaryota|Rep: Small nuclear ribonucleoprotein,
putative - Plasmodium falciparum (isolate 3D7)
Length = 83
Score = 59.3 bits (137), Expect = 6e-08
Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = +3
Query: 102 ITMSKAHPP-ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
+T+ KA P + +KFM+K+L I LN R V G+LRG+D FMNLVLD ++E
Sbjct: 3 LTVGKAGPASDFRKFMEKRLQIYLNGNRQVVGILRGYDTFMNLVLDNTME 52
>UniRef50_Q7SDP3 Cluster: Putative uncharacterized protein
NCU01930.1; n=2; Sordariomycetes|Rep: Putative
uncharacterized protein NCU01930.1 - Neurospora crassa
Length = 132
Score = 55.6 bits (128), Expect = 8e-07
Identities = 23/47 (48%), Positives = 35/47 (74%)
Frame = +3
Query: 129 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKTVSV 269
+LKK+MD+++++K N GR VTG L+G+D MNLVLD+ E + + V
Sbjct: 57 DLKKYMDQRITVKFNGGREVTGTLKGYDALMNLVLDDVQEAVRGLVV 103
>UniRef50_A7TGG5 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 126
Score = 55.6 bits (128), Expect = 8e-07
Identities = 24/40 (60%), Positives = 31/40 (77%)
Frame = +3
Query: 129 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
+L K+ D K+ +KL GR VTGVL+G+DP M LVLDE+VE
Sbjct: 40 DLAKYKDTKIRVKLMGGRLVTGVLKGYDPLMTLVLDETVE 79
>UniRef50_Q677D4 Cluster: Small nuclear ribonucleoprotein
polypeptide G; n=1; Hyacinthus orientalis|Rep: Small
nuclear ribonucleoprotein polypeptide G - Hyacinthus
orientalis (Common hyacinth)
Length = 96
Score = 54.8 bits (126), Expect = 1e-06
Identities = 27/51 (52%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 99 HITMSKAHPPELKKFMD-KKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
H + PP LK+ KL IKLNA R V G LRGFD FMNLV+D ++E
Sbjct: 14 HHAAASGQPPALKQVHGTSKLQIKLNANRVVVGTLRGFDQFMNLVIDNTME 64
Score = 36.7 bits (81), Expect = 0.39
Identities = 13/21 (61%), Positives = 21/21 (100%)
Frame = +2
Query: 266 RNNVGMVVIRGNSIIMLESLD 328
+N++GMVVIRGNS++M+E+L+
Sbjct: 70 KNDIGMVVIRGNSVVMIEALE 90
>UniRef50_A7QWV4 Cluster: Chromosome chr13 scaffold_210, whole
genome shotgun sequence; n=8; Eukaryota|Rep: Chromosome
chr13 scaffold_210, whole genome shotgun sequence -
Vitis vinifera (Grape)
Length = 113
Score = 54.4 bits (125), Expect = 2e-06
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +3
Query: 129 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
+L KF+DK + +KL GR VTG L+G+D +NLVLDE+VE
Sbjct: 24 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 63
>UniRef50_Q5CY65 Cluster: Putative uncharacterized protein; n=1;
Cryptosporidium parvum Iowa II|Rep: Putative
uncharacterized protein - Cryptosporidium parvum Iowa II
Length = 73
Score = 53.6 bits (123), Expect = 3e-06
Identities = 27/54 (50%), Positives = 34/54 (62%)
Frame = +3
Query: 87 YFKKHITMSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
Y +I MS L KF +K++ +KL GR V G+LRGFD NLVLDE+VE
Sbjct: 9 YLSFNIEMSSKSILGLNKFNNKEIKVKLCGGREVIGILRGFDAVTNLVLDETVE 62
>UniRef50_Q6MY59 Cluster: U6 snrna-associated sm-like protein,
putative (Small nuclear ribonucleoprotein (LSM7),
putative); n=2; Pezizomycotina|Rep: U6 snrna-associated
sm-like protein, putative (Small nuclear
ribonucleoprotein (LSM7), putative) - Aspergillus
fumigatus (Sartorya fumigata)
Length = 134
Score = 53.2 bits (122), Expect = 4e-06
Identities = 22/47 (46%), Positives = 34/47 (72%)
Frame = +3
Query: 129 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKTVSV 269
+L K+MDK++ +K N GR V+G+L+G+D MNLVLD+ E + S+
Sbjct: 54 DLSKYMDKEVKVKFNGGREVSGMLKGYDQLMNLVLDDVKESMRGKSL 100
>UniRef50_A4S1J9 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 100
Score = 52.0 bits (119), Expect = 1e-05
Identities = 20/43 (46%), Positives = 33/43 (76%)
Frame = +3
Query: 129 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECK 257
+L +F+D+ + +KL+ GR VTG L+G+D +NLVLDE++E +
Sbjct: 9 DLARFIDRGVRVKLSGGREVTGTLKGYDQLLNLVLDEAIEHLR 51
>UniRef50_Q6CRN4 Cluster: Similar to sp|P40204 Saccharomyces
cerevisiae YFL017wa SNP2 snRNP G protein; n=1;
Kluyveromyces lactis|Rep: Similar to sp|P40204
Saccharomyces cerevisiae YFL017wa SNP2 snRNP G protein -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 71
Score = 52.0 bits (119), Expect = 1e-05
Identities = 20/38 (52%), Positives = 30/38 (78%)
Frame = +3
Query: 135 KKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
K++MDKKL ++LN R + G+LRG+D F+NLVLD ++
Sbjct: 5 KQYMDKKLILQLNGNRKIIGILRGYDAFLNLVLDNPIQ 42
>UniRef50_UPI0000D9E97B Cluster: PREDICTED: LSM7 homolog, U6 small
nuclear RNA associated (S. cerevisiae); n=1; Macaca
mulatta|Rep: PREDICTED: LSM7 homolog, U6 small nuclear
RNA associated (S. cerevisiae) - Macaca mulatta
Length = 123
Score = 51.6 bits (118), Expect = 1e-05
Identities = 19/40 (47%), Positives = 30/40 (75%)
Frame = +3
Query: 129 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
+L K++DK + +K GR +G+L+GFDP +NLVLD ++E
Sbjct: 14 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIE 53
>UniRef50_Q9UK45 Cluster: U6 snRNA-associated Sm-like protein LSm7;
n=26; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm7 - Homo sapiens (Human)
Length = 103
Score = 51.6 bits (118), Expect = 1e-05
Identities = 19/40 (47%), Positives = 30/40 (75%)
Frame = +3
Query: 129 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
+L K++DK + +K GR +G+L+GFDP +NLVLD ++E
Sbjct: 14 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIE 53
>UniRef50_UPI000049841B Cluster: small nuclear ribonucleoprotein G;
n=2; Entamoeba histolytica HM-1:IMSS|Rep: small nuclear
ribonucleoprotein G - Entamoeba histolytica HM-1:IMSS
Length = 81
Score = 51.2 bits (117), Expect = 2e-05
Identities = 19/41 (46%), Positives = 33/41 (80%)
Frame = +3
Query: 126 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
PELK +++K++ +K++ R++ GVL G+D +MNLVLDE+ +
Sbjct: 6 PELKHYLEKRILVKIHGKRSIIGVLSGYDEYMNLVLDEAYD 46
>UniRef50_Q4Q5H5 Cluster: Small nuclear ribonucleoprotein, putative;
n=5; Trypanosomatidae|Rep: Small nuclear
ribonucleoprotein, putative - Leishmania major
Length = 81
Score = 51.2 bits (117), Expect = 2e-05
Identities = 19/49 (38%), Positives = 36/49 (73%)
Frame = +3
Query: 126 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKTVSVT 272
P L FM+K++ +K+ GR+++GVLRG D M++VL ++++E + +V+
Sbjct: 8 PNLNHFMEKRIVVKIQGGRSISGVLRGVDEHMSIVLHDAMDETRNAAVS 56
>UniRef50_A6QY75 Cluster: Predicted protein; n=2; Fungi/Metazoa
group|Rep: Predicted protein - Ajellomyces capsulatus
NAm1
Length = 171
Score = 50.8 bits (116), Expect = 2e-05
Identities = 20/37 (54%), Positives = 29/37 (78%)
Frame = +3
Query: 129 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDE 239
+L K+M+K++ +K N GR VTG L+G+D MNLVLD+
Sbjct: 86 DLTKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDD 122
>UniRef50_A2R8P2 Cluster: Function: snRPG of H. sapiens is
associated with small nuclear ribonucleoproteins; n=1;
Aspergillus niger|Rep: Function: snRPG of H. sapiens is
associated with small nuclear ribonucleoproteins -
Aspergillus niger
Length = 105
Score = 50.4 bits (115), Expect = 3e-05
Identities = 21/47 (44%), Positives = 35/47 (74%)
Frame = +3
Query: 111 SKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEE 251
++A+ +++M+K++ +LN R V G+LRG+D FMN+VLDE+ EE
Sbjct: 12 TEANIAVFQQYMEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEE 58
Score = 32.7 bits (71), Expect = 6.3
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +2
Query: 260 GQRNNVGMVVIRGNSIIMLE 319
G++ +GM+VIRGNS++MLE
Sbjct: 62 GEKVAIGMIVIRGNSVVMLE 81
>UniRef50_P53905 Cluster: U6 snRNA-associated Sm-like protein LSm7;
n=6; Saccharomycetales|Rep: U6 snRNA-associated Sm-like
protein LSm7 - Saccharomyces cerevisiae (Baker's yeast)
Length = 115
Score = 50.4 bits (115), Expect = 3e-05
Identities = 21/40 (52%), Positives = 30/40 (75%)
Frame = +3
Query: 129 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
+L K+ D K+ +KL G+ V GVL+G+D MNLVLD++VE
Sbjct: 29 DLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVE 68
>UniRef50_Q5K900 Cluster: U6 snRNA binding protein, putative; n=1;
Filobasidiella neoformans|Rep: U6 snRNA binding protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 131
Score = 50.0 bits (114), Expect = 4e-05
Identities = 20/40 (50%), Positives = 29/40 (72%)
Frame = +3
Query: 132 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEE 251
L +F+DK + +K GR TG+L+G+D MNLV+D+ VEE
Sbjct: 29 LAQFVDKSIRVKFMGGREATGILKGYDQLMNLVMDDVVEE 68
>UniRef50_A0D0Y9 Cluster: Chromosome undetermined scaffold_33, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_33,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 104
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +3
Query: 114 KAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
+ + +L K+ K+L IKLNA R + G + GFD FMNLVLD E
Sbjct: 12 QGYQADLNKYFGKRLKIKLNAKRTIIGTVIGFDIFMNLVLDHCKE 56
>UniRef50_Q2URY1 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 122
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/36 (55%), Positives = 28/36 (77%)
Frame = +3
Query: 144 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEE 251
M+K++ +LN R V G+LRG+D FMN+VLDE+ EE
Sbjct: 1 MEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEE 36
Score = 33.1 bits (72), Expect = 4.8
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +2
Query: 260 GQRNNVGMVVIRGNSIIMLE 319
G++ +GMVVIRGNS++MLE
Sbjct: 40 GEKVAIGMVVIRGNSVVMLE 59
>UniRef50_Q4MYV9 Cluster: U6 snRNA-associated protein, putative;
n=2; Theileria|Rep: U6 snRNA-associated protein,
putative - Theileria parva
Length = 104
Score = 46.4 bits (105), Expect = 5e-04
Identities = 22/45 (48%), Positives = 30/45 (66%)
Frame = +3
Query: 132 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKTVS 266
L K ++K++ +K + GR V GVLRG D NLVLD++VE K S
Sbjct: 17 LNKHLNKEVYVKFSGGREVKGVLRGHDAMSNLVLDDTVEYLKDSS 61
>UniRef50_O74499 Cluster: U6 snRNP-associated protein Lsm7; n=19;
Eukaryota|Rep: U6 snRNP-associated protein Lsm7 -
Schizosaccharomyces pombe (Fission yeast)
Length = 113
Score = 46.4 bits (105), Expect = 5e-04
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +3
Query: 129 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECK 257
+L ++ D+++ GR +TG+L+GFD MNLVLD+ E+ +
Sbjct: 27 DLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLR 69
>UniRef50_A2GMH6 Cluster: Sm protein; n=3; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 81
Score = 46.0 bits (104), Expect = 6e-04
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Frame = +3
Query: 102 ITMSKAHPP--ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDES 242
+ M++A PP ELK + KK+ I N R V+G+L GFD FMNL + ++
Sbjct: 3 VQMTQAQPPYPELKGHLQKKVKIMSNKDREVSGILTGFDHFMNLTIRDA 51
>UniRef50_Q40942 Cluster: Small nucleolar ribonucleoprotein E
homolog; n=2; Bigelowiella natans|Rep: Small nucleolar
ribonucleoprotein E homolog - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 71
Score = 44.8 bits (101), Expect = 0.001
Identities = 19/43 (44%), Positives = 31/43 (72%)
Frame = +3
Query: 114 KAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDES 242
K + P+LK FM++++ I+L + G LRGFD F+N+VL++S
Sbjct: 4 KINIPDLKLFMEEEIQIQLKNKLCLKGTLRGFDQFLNIVLEKS 46
>UniRef50_Q6BPZ2 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=1;
Debaryomyces hansenii|Rep: Debaryomyces hansenii
chromosome E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 78
Score = 44.8 bits (101), Expect = 0.001
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +3
Query: 129 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECK 257
+L + DK++ +K GR V GVL+GFD MNLVL++ E +
Sbjct: 34 DLNNYKDKQIRVKFIGGRQVIGVLKGFDQLMNLVLEDVKENIR 76
>UniRef50_Q4Z0C4 Cluster: U6 snRNA-associated Sm-like protein,
putative; n=4; Plasmodium|Rep: U6 snRNA-associated
Sm-like protein, putative - Plasmodium berghei
Length = 108
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +3
Query: 129 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
++KKFM++K+ +K + GR V G L G D NLVLD++ E
Sbjct: 20 DIKKFMNQKIRVKFDGGREVVGNLIGHDAIFNLVLDKTEE 59
>UniRef50_A2Y859 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 141
Score = 43.2 bits (97), Expect = 0.004
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = +3
Query: 126 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
P L+ +D+ +S+ N GR + G LRGFD N++LDES E
Sbjct: 6 PGLESLVDQIISVITNDGRNIVGTLRGFDQATNIILDESHE 46
>UniRef50_Q8SRW7 Cluster: SMALL NUCLEAR RIBONUCLEOPROTEIN G; n=1;
Encephalitozoon cuniculi|Rep: SMALL NUCLEAR
RIBONUCLEOPROTEIN G - Encephalitozoon cuniculi
Length = 78
Score = 43.2 bits (97), Expect = 0.004
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +3
Query: 108 MSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
M K+ P L + K++ +++ G + G+L G+D FMN+VL E E
Sbjct: 1 MGKSAVPNLASLLHKRIVVRIGGGHTLKGLLTGYDAFMNIVLSEVTE 47
>UniRef50_A7PDU1 Cluster: Chromosome chr11 scaffold_13, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr11 scaffold_13, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 242
Score = 41.1 bits (92), Expect = 0.018
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 132 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
L ++DKKL + L GR + GVLR FD F N VL+ + E
Sbjct: 15 LASYLDKKLLVLLRDGRKLLGVLRSFDQFANAVLEGACE 53
Score = 33.9 bits (74), Expect = 2.7
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3
Query: 150 KKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
+KL + L GR + GVLR FD F N VL+ + E
Sbjct: 135 EKLLVLLRDGRKLLGVLRSFDQFANAVLEGACE 167
>UniRef50_Q4N4E0 Cluster: Small nuclear ribonucleoprotein G,
putative; n=2; Piroplasmida|Rep: Small nuclear
ribonucleoprotein G, putative - Theileria parva
Length = 86
Score = 41.1 bits (92), Expect = 0.018
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +3
Query: 162 IKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
+ LN R V GVLRG+D FMN+VLD ++E
Sbjct: 27 VHLNGSRHVVGVLRGYDTFMNIVLDNALE 55
>UniRef50_A1DH91 Cluster: Small nuclear ribonucleoprotein (LSM1),
putative; n=11; Pezizomycotina|Rep: Small nuclear
ribonucleoprotein (LSM1), putative - Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 177
Score = 40.7 bits (91), Expect = 0.024
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +3
Query: 129 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
+L DKKL + L GR + GVLR +D F NLVL +++E
Sbjct: 52 QLLDLTDKKLVLVLRDGRKLIGVLRSWDQFANLVLQDTIE 91
>UniRef50_P40018 Cluster: Small nuclear ribonucleoprotein-associated
protein B; n=4; Saccharomycetales|Rep: Small nuclear
ribonucleoprotein-associated protein B - Saccharomyces
cerevisiae (Baker's yeast)
Length = 196
Score = 40.7 bits (91), Expect = 0.024
Identities = 20/45 (44%), Positives = 24/45 (53%)
Frame = +3
Query: 117 AHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEE 251
AH L +D KL + GR G L FD MNLVL+E +EE
Sbjct: 7 AHSSRLANLIDYKLRVLTQDGRVYIGQLMAFDKHMNLVLNECIEE 51
>UniRef50_Q4PA95 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 148
Score = 39.9 bits (89), Expect = 0.041
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +3
Query: 144 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
+DKK+ + L G+ + GVLR +D F NLVL ++VE
Sbjct: 22 VDKKMLVVLRDGKKLIGVLRSYDQFANLVLQDTVE 56
>UniRef50_A3LX11 Cluster: Predicted protein; n=3;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 92
Score = 39.9 bits (89), Expect = 0.041
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +3
Query: 108 MSKAHPPELK--KFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKTV 263
M+ A P L +F+ L + + GR VTG+L DPF NL+L +EE + +
Sbjct: 1 MASASNPSLTPDQFIGSNLRVAIKDGRVVTGILTVIDPFGNLLLSNVIEESEDI 54
>UniRef50_Q979R0 Cluster: Small nuclear ribonucleoprotein; n=4;
Thermoplasmatales|Rep: Small nuclear ribonucleoprotein -
Thermoplasma volcanium
Length = 71
Score = 39.5 bits (88), Expect = 0.055
Identities = 17/45 (37%), Positives = 30/45 (66%)
Frame = +3
Query: 132 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKTVS 266
L++ ++K++S+ L R + G L G+D +MN+VLD+ E + VS
Sbjct: 8 LEESVNKRVSLLLKDNRVLEGTLTGYDDYMNMVLDDVDENSENVS 52
>UniRef50_Q54W83 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 129
Score = 39.1 bits (87), Expect = 0.072
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3
Query: 144 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
+DKKL + L GR G++R FD F N+VL +++E
Sbjct: 9 VDKKLIVVLRDGRKFIGIMRTFDQFANIVLQDTIE 43
>UniRef50_Q755T6 Cluster: AER432Cp; n=1; Eremothecium gossypii|Rep:
AER432Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 158
Score = 39.1 bits (87), Expect = 0.072
Identities = 20/45 (44%), Positives = 24/45 (53%)
Frame = +3
Query: 117 AHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEE 251
+H LK +D KL + GR G L FD MNLVL + VEE
Sbjct: 6 SHRSTLKDLIDYKLRVLSQDGRVYVGTLLAFDAHMNLVLADCVEE 50
>UniRef50_Q6CGS0 Cluster: Similar to sp|P47017 Saccharomyces
cerevisiae YJL124c LSM1 Sm-like; n=1; Yarrowia
lipolytica|Rep: Similar to sp|P47017 Saccharomyces
cerevisiae YJL124c LSM1 Sm-like - Yarrowia lipolytica
(Candida lipolytica)
Length = 144
Score = 39.1 bits (87), Expect = 0.072
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +3
Query: 144 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKTVSVTMLG 281
+D+K+ + L GR G+LR FD F NLVL ++ E+ V + G
Sbjct: 24 IDRKVVVTLRGGRKFFGILRSFDQFANLVLQDTYEKYFAVPEKVYG 69
>UniRef50_Q5KN63 Cluster: Sm-like protein, putative; n=1;
Filobasidiella neoformans|Rep: Sm-like protein, putative
- Cryptococcus neoformans (Filobasidiella neoformans)
Length = 95
Score = 39.1 bits (87), Expect = 0.072
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +3
Query: 132 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKTVSVTMLG 281
+K + +++ IKL R VTGVL +D MN+V+ ++ E V VT G
Sbjct: 16 VKLALGERVLIKLRGDRIVTGVLHAYDAHMNVVISQAEESIHVVDVTEEG 65
>UniRef50_O74483 Cluster: U6 snRNA-associated Sm-like protein LSm8;
n=1; Schizosaccharomyces pombe|Rep: U6 snRNA-associated
Sm-like protein LSm8 - Schizosaccharomyces pombe
(Fission yeast)
Length = 94
Score = 38.7 bits (86), Expect = 0.096
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 132 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
L FM++++ + N GR V G L+GFD NL+L +S E
Sbjct: 3 LADFMEQRVQVITNDGRVVLGSLKGFDHTTNLILSDSFE 41
>UniRef50_O95777 Cluster: U6 snRNA-associated Sm-like protein LSm8;
n=23; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm8 - Homo sapiens (Human)
Length = 96
Score = 38.7 bits (86), Expect = 0.096
Identities = 15/39 (38%), Positives = 28/39 (71%)
Frame = +3
Query: 132 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
L+ ++++ +++ + GR + G L+GFD +NL+LDES E
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHE 43
>UniRef50_A4S5K5 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 126
Score = 38.3 bits (85), Expect = 0.13
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +3
Query: 144 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
+DK+L + L G + G LR FD F N+VL+ +VE
Sbjct: 17 LDKRLLVALRDGSNIIGTLRSFDQFANIVLESAVE 51
>UniRef50_Q20229 Cluster: Putative uncharacterized protein lsm-1;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein lsm-1 - Caenorhabditis elegans
Length = 125
Score = 38.3 bits (85), Expect = 0.13
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +3
Query: 144 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
+DKKL + L GR + G LR D F NL+L++ VE
Sbjct: 18 LDKKLLVVLRDGRKLIGFLRSIDQFANLILEDVVE 52
>UniRef50_Q4V6D7 Cluster: IP05148p; n=2; Drosophila
melanogaster|Rep: IP05148p - Drosophila melanogaster
(Fruit fly)
Length = 99
Score = 37.9 bits (84), Expect = 0.17
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +3
Query: 144 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
+DKKL + L GR + G LR D F NLVL ++E
Sbjct: 34 VDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIE 68
>UniRef50_A3H6D3 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Caldivirga maquilingensis IC-167|Rep: Like-Sm
ribonucleoprotein, core - Caldivirga maquilingensis
IC-167
Length = 86
Score = 37.9 bits (84), Expect = 0.17
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +3
Query: 132 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
L ++K + +KL AGR ++G LR D MN+VLD++ E
Sbjct: 16 LGMMVNKSVVVKLKAGRVLSGTLRFIDQCMNIVLDDAEE 54
>UniRef50_Q6DBW5 Cluster: Zgc:101136; n=6; Euteleostomi|Rep:
Zgc:101136 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 133
Score = 37.5 bits (83), Expect = 0.22
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +3
Query: 144 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
+DKK + L GR + G+LR D F NLVL ++VE
Sbjct: 14 IDKKHLVLLRDGRTLIGILRSIDQFANLVLHQTVE 48
>UniRef50_Q2FT45 Cluster: Like-Sm ribonucleoprotein, core; n=3;
Methanomicrobiales|Rep: Like-Sm ribonucleoprotein, core
- Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 80
Score = 37.5 bits (83), Expect = 0.22
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +3
Query: 102 ITMSKAHPPELKKFMDKK-LSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
I M+K L + ++++ + I L GR + GVL+G+D MNLVLD++ E
Sbjct: 4 IDMTKRPMDILDQVLNRQPVLISLKGGREIKGVLQGYDVHMNLVLDKAEE 53
>UniRef50_P87173 Cluster: Uncharacterized protein C3D6.08c; n=1;
Schizosaccharomyces pombe|Rep: Uncharacterized protein
C3D6.08c - Schizosaccharomyces pombe (Fission yeast)
Length = 140
Score = 37.5 bits (83), Expect = 0.22
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +3
Query: 132 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
L ++D+K+ + L G+ + G+LR FD F NL+L ++E
Sbjct: 16 LVDYVDRKVIVVLRDGKKLIGILRSFDQFANLMLQYTIE 54
>UniRef50_P47017 Cluster: Sm-like protein LSm1; n=11;
Saccharomycetales|Rep: Sm-like protein LSm1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 172
Score = 37.5 bits (83), Expect = 0.22
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3
Query: 144 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
+D+K+ + L GR + GVLR FD + NL+L + VE
Sbjct: 50 VDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVE 84
>UniRef50_Q4UHZ4 Cluster: (U6) snRNA-associated Sm-like protein,
putative; n=3; Piroplasmida|Rep: (U6) snRNA-associated
Sm-like protein, putative - Theileria annulata
Length = 90
Score = 37.1 bits (82), Expect = 0.29
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +3
Query: 132 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
+ K + K+ I + + +TG LRGFD +MN+VL++ V+
Sbjct: 16 IDKCLGSKIWIIMKNDKEITGTLRGFDDYMNMVLEDVVD 54
>UniRef50_Q1HQ51 Cluster: LSM1-like protein; n=3; Endopterygota|Rep:
LSM1-like protein - Bombyx mori (Silk moth)
Length = 138
Score = 37.1 bits (82), Expect = 0.29
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +3
Query: 144 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
+DKKL + L GR + G LR D F NLVL +++E
Sbjct: 18 LDKKLMVLLRDGRTLIGYLRCVDQFANLVLHKTIE 52
>UniRef50_Q8ZYP8 Cluster: Small nuclear ribonucleoprotein homolog;
n=4; Pyrobaculum|Rep: Small nuclear ribonucleoprotein
homolog - Pyrobaculum aerophilum
Length = 85
Score = 37.1 bits (82), Expect = 0.29
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +3
Query: 132 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
L K ++K++ +L G AV GVL +D MNLVL+++ E
Sbjct: 16 LTKMLNKEIIARLKGGVAVKGVLTAYDGCMNLVLNDAAE 54
>UniRef50_Q01J34 Cluster: OSIGBa0140O07.9 protein; n=5; Oryza
sativa|Rep: OSIGBa0140O07.9 protein - Oryza sativa
(Rice)
Length = 136
Score = 36.7 bits (81), Expect = 0.39
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +3
Query: 132 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
L F+DKKL + L GR + G L FD F N+VL + E
Sbjct: 16 LAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACE 54
>UniRef50_Q4Q9J1 Cluster: Lsm7p protein, putative; n=6;
Trypanosomatidae|Rep: Lsm7p protein, putative -
Leishmania major
Length = 91
Score = 36.7 bits (81), Expect = 0.39
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = +3
Query: 99 HITMSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDES 242
HI K L+K++D+K+ + G V GVL+GFD +NLVL ++
Sbjct: 7 HILKKKEGILSLEKYLDRKIVVS-QKGHEVHGVLKGFDNNVNLVLADA 53
>UniRef50_O75243 Cluster: R30783_1; n=3; Mammalia|Rep: R30783_1 -
Homo sapiens (Human)
Length = 145
Score = 36.7 bits (81), Expect = 0.39
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +3
Query: 177 GRAVTGVLRGFDPFMNLVLDESVE 248
GR +G+L+GFDP +NLVLD ++E
Sbjct: 72 GRPRSGILKGFDPLLNLVLDGTIE 95
>UniRef50_A3DMZ9 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Staphylothermus marinus F1|Rep: Like-Sm
ribonucleoprotein, core - Staphylothermus marinus
(strain ATCC 43588 / DSM 3639 / F1)
Length = 149
Score = 36.7 bits (81), Expect = 0.39
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 102 ITMSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFD-PFMNLVLDESVE 248
I S+ EL +DKK+ + L GR G+L GFD P +N++L+ +V+
Sbjct: 4 IDASRRLAAELAGLVDKKVKVILADGRFYEGILTGFDHPSLNILLENAVD 53
>UniRef50_P57743 Cluster: U6 snRNA-associated Sm-like protein LSm3;
n=2; Saccharomyces cerevisiae|Rep: U6 snRNA-associated
Sm-like protein LSm3 - Saccharomyces cerevisiae (Baker's
yeast)
Length = 89
Score = 36.7 bits (81), Expect = 0.39
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3
Query: 132 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
LK +D+++ IKL R + G L+ FD N+VL ++VE
Sbjct: 8 LKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVE 46
>UniRef50_Q025U8 Cluster: Amidohydrolase; n=1; Solibacter usitatus
Ellin6076|Rep: Amidohydrolase - Solibacter usitatus
(strain Ellin6076)
Length = 460
Score = 35.9 bits (79), Expect = 0.68
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +1
Query: 280 DGGNSWQQYYNAGIFRQTLVDLEWARNITNAVNVLHVSSINKYKTRILNLVSTATAA 450
+GG ++AG+FR V L W +N+VN+ +IN K R + S A AA
Sbjct: 150 EGGGGKVYMFHAGLFRDVDVVLAWHPGDSNSVNLRSDLAINGAKFRFYGIASHAAAA 206
>UniRef50_Q8TYS2 Cluster: Small nuclear ribonucleoprotein (SnRNP)
homolog; n=1; Methanopyrus kandleri|Rep: Small nuclear
ribonucleoprotein (SnRNP) homolog - Methanopyrus
kandleri
Length = 73
Score = 35.9 bits (79), Expect = 0.68
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3
Query: 132 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
L+ F+D + ++L G+ + G L FD +NLVLD+ VE
Sbjct: 7 LRDFLDDIVIVELKTGKTLRGRLVSFDGHLNLVLDDCVE 45
>UniRef50_A7DPN6 Cluster: Peptidase S8 and S53, subtilisin, kexin,
sedolisin precursor; n=1; Candidatus Nitrosopumilus
maritimus SCM1|Rep: Peptidase S8 and S53, subtilisin,
kexin, sedolisin precursor - Candidatus Nitrosopumilus
maritimus SCM1
Length = 1269
Score = 35.9 bits (79), Expect = 0.68
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +3
Query: 57 HDNNINSVL*YFKKHITMSKAHPPE-LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVL 233
HD+ +N + ++ +S P E L+ F D+K I + + V FD FMN
Sbjct: 811 HDSILNKTDTFIPNYVKLSDVKPHEDLEDFFDEKNPIPDESSLMILNVNFPFDQFMNSTS 870
Query: 234 DESVEECKTVSVTMLGW 284
D ++ K S+ + W
Sbjct: 871 DVYADDLKISSLYLYDW 887
>UniRef50_P40089 Cluster: U6 snRNA-associated Sm-like protein LSm5;
n=5; Saccharomycetales|Rep: U6 snRNA-associated Sm-like
protein LSm5 - Saccharomyces cerevisiae (Baker's yeast)
Length = 93
Score = 35.9 bits (79), Expect = 0.68
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = +3
Query: 132 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
+ K +++K+ I L + R G L GFD F+N++L+++VE
Sbjct: 12 IDKTINQKVLIVLQSNREFEGTLVGFDDFVNVILEDAVE 50
>UniRef50_O15116 Cluster: U6 snRNA-associated Sm-like protein LSm1;
n=23; Eumetazoa|Rep: U6 snRNA-associated Sm-like protein
LSm1 - Homo sapiens (Human)
Length = 133
Score = 35.9 bits (79), Expect = 0.68
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +3
Query: 144 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
+DKK + L GR + G LR D F NLVL ++VE
Sbjct: 14 IDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVE 48
>UniRef50_Q7QZM9 Cluster: GLP_680_47464_47838; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_680_47464_47838 - Giardia lamblia
ATCC 50803
Length = 124
Score = 35.5 bits (78), Expect = 0.89
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +3
Query: 150 KKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
K + ++L +GR +TGVL+ +D +NLV E+ E
Sbjct: 62 KPVLVQLRSGRFITGVLKAYDRHLNLVFSEATE 94
>UniRef50_Q6CWY1 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome B of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 191
Score = 35.5 bits (78), Expect = 0.89
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +3
Query: 114 KAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEE 251
K +L +D ++ + + GR G L FD +MNLV+ + VEE
Sbjct: 7 KKKETKLSDLIDYRIRVATHDGRVYIGQLMAFDAYMNLVMGDCVEE 52
>UniRef50_Q5CQ90 Cluster: Small nuclear ribonucleoprotein U6; n=1;
Cryptosporidium parvum Iowa II|Rep: Small nuclear
ribonucleoprotein U6 - Cryptosporidium parvum Iowa II
Length = 160
Score = 35.1 bits (77), Expect = 1.2
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 132 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
L++ +DK++ + L GR TG+ R FD + +L L+ S E
Sbjct: 46 LEEDLDKEIYVVLRDGRQFTGIFRSFDQYGSLCLERSFE 84
>UniRef50_Q17E06 Cluster: Small nuclear ribonucleoprotein, core,
putative; n=2; Culicidae|Rep: Small nuclear
ribonucleoprotein, core, putative - Aedes aegypti
(Yellowfever mosquito)
Length = 162
Score = 35.1 bits (77), Expect = 1.2
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3
Query: 132 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
L+ +++ +SI GR G L+GFD +N++LDES E
Sbjct: 71 LESYVNTTVSIITADGRNFVGTLKGFDQTINIILDESHE 109
>UniRef50_UPI00015B5F11 Cluster: PREDICTED: similar to ribonuclease
NW; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
ribonuclease NW - Nasonia vitripennis
Length = 244
Score = 34.7 bits (76), Expect = 1.6
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +1
Query: 307 YNAGIFRQTLVDLEWARNITNAVNVLHVSSINKYKTRILNLVSTATAATV 456
Y +G Q EW ++ T A V +SI KY ++ LNL+ T T+
Sbjct: 110 YKSGFTNQRFWSYEWKKHGTCAAGVPETNSIKKYVSKALNLLDTYNMKTL 159
>UniRef50_A0D2M7 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 83
Score = 34.7 bits (76), Expect = 1.6
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 129 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDE 239
+L+ ++K++ I+ GR V G L FD +NLVLDE
Sbjct: 11 KLQSHINKEVVIQFQGGRQVKGTLLSFDNQLNLVLDE 47
>UniRef50_Q0UX37 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 80
Score = 34.3 bits (75), Expect = 2.1
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +3
Query: 132 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
+ K + ++ + +N G+ TG L GFD ++N+VL+E E
Sbjct: 21 IDKCVGSQIWVIMNGGKEFTGKLVGFDDYVNMVLEEVTE 59
>UniRef50_A7TII8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 109
Score = 34.3 bits (75), Expect = 2.1
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 126 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDE 239
P LK +++KK+ I GR + L GFD NLVL +
Sbjct: 3 PLLKDYLNKKIVIITTEGRCLLATLEGFDKNTNLVLSQ 40
>UniRef50_Q701X8 Cluster: Putative uncharacterized protein; n=1;
uncultured crenarchaeote|Rep: Putative uncharacterized
protein - uncultured crenarchaeote
Length = 89
Score = 34.3 bits (75), Expect = 2.1
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +3
Query: 132 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
L++ + K + +KL R+V G ++GFD MN+V+ E+ E
Sbjct: 11 LQESVGKIVLVKLKGRRSVKGKIKGFDKQMNIVITEATE 49
>UniRef50_Q9YEQ5 Cluster: Putative snRNP Sm-like protein; n=1;
Aeropyrum pernix|Rep: Putative snRNP Sm-like protein -
Aeropyrum pernix
Length = 77
Score = 34.3 bits (75), Expect = 2.1
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +3
Query: 141 FMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKTVSVTMLG 281
++D + +KL +G + GVL+ +D +N++L ++ EE S+ LG
Sbjct: 16 YVDTPVLVKLKSGLRIKGVLKTYDQHLNIILGDA-EEIGETSIRRLG 61
>UniRef50_A4VDT4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 107
Score = 33.9 bits (74), Expect = 2.7
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 132 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
L+K + KK+ I G+ + G+L+G D +N +L + VE
Sbjct: 17 LEKLLFKKIQIITTDGKVLIGILKGLDQALNSILSDCVE 55
>UniRef50_A1CDT1 Cluster: Small nuclear ribonucleoprotein SmE,
putative; n=12; Pezizomycotina|Rep: Small nuclear
ribonucleoprotein SmE, putative - Aspergillus clavatus
Length = 95
Score = 33.9 bits (74), Expect = 2.7
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +3
Query: 186 VTGVLRGFDPFMNLVLDESVE 248
+ G +RGFD FMNLV+D++VE
Sbjct: 43 IEGKIRGFDEFMNLVVDDAVE 63
>UniRef50_UPI0001560E30 Cluster: PREDICTED: similar to ZNF449; n=1;
Equus caballus|Rep: PREDICTED: similar to ZNF449 - Equus
caballus
Length = 461
Score = 33.5 bits (73), Expect = 3.6
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 345 RVGKKYHQCCKCASRFINK*I*NSDLKL 428
R G+K HQC C RF NK + N LK+
Sbjct: 288 RPGEKPHQCAHCGKRFANKKLLNGHLKI 315
>UniRef50_A2FZR2 Cluster: Sm protein; n=1; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 89
Score = 33.5 bits (73), Expect = 3.6
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 132 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
L++ + K+ IKL R + G L D F NLVL+++VE
Sbjct: 16 LREMIGHKVFIKLENNRELEGTLMSLDQFGNLVLNDTVE 54
>UniRef50_A0D4X7 Cluster: Chromosome undetermined scaffold_38, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_38,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 2707
Score = 33.5 bits (73), Expect = 3.6
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = -3
Query: 415 EFYIYLLMKREAHLQHW*YFLPTLSLLKSV*RFQHYNTVATNYHHPNIVTLTVLHSSTDS 236
EF+ Y M+ + LQ W YFL ++LL + Q+ N TNY H L+VL +
Sbjct: 667 EFHDYSQMQDD--LQTWNYFLAYINLLSDI--CQNRNKQGTNYVH-QFYELSVLSTILQD 721
Query: 235 SRTKFMNGSKP 203
T+ +N P
Sbjct: 722 PETEQINAIDP 732
>UniRef50_Q4P7M4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 232
Score = 33.5 bits (73), Expect = 3.6
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +3
Query: 129 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKTVS 266
++ ++ +L I LN R + G L FD MNLVL +S E K S
Sbjct: 10 KMMSLINYRLRITLNDSRQIVGQLLAFDAHMNLVLADSQEYRKVKS 55
>UniRef50_Q0ULJ4 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 234
Score = 33.5 bits (73), Expect = 3.6
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 132 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
L +DKK+ + L + G+LR +D F NLVL E E
Sbjct: 97 LLDMVDKKVDVLLRDEKEYIGILRSYDQFANLVLTECHE 135
>UniRef50_Q98S49 Cluster: Small nuclear ribonucleoprotein F; n=1;
Guillardia theta|Rep: Small nuclear ribonucleoprotein F
- Guillardia theta (Cryptomonas phi)
Length = 73
Score = 33.1 bits (72), Expect = 4.8
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 147 DKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKTVSVTMLG 281
+K + +KL G + TG+ G D +MN++LD E ++ LG
Sbjct: 12 NKNVFVKLKWGSSYTGIFIGSDNYMNIILDSCSEVITEQNLGFLG 56
>UniRef50_Q8MYW8 Cluster: RE61341p; n=1; Drosophila
melanogaster|Rep: RE61341p - Drosophila melanogaster
(Fruit fly)
Length = 114
Score = 33.1 bits (72), Expect = 4.8
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = +2
Query: 101 HYNVKSTSTRIEKIHGQKIVNKAECGSRCYRCVARF*SIHE 223
H NV+ S R EKIHGQ + E +R R AR S+HE
Sbjct: 24 HQNVEGPSPRGEKIHGQAHDAETERRTRGDRYFARLRSLHE 64
>UniRef50_Q8IGW7 Cluster: RE11655p; n=12; Eukaryota|Rep: RE11655p -
Drosophila melanogaster (Fruit fly)
Length = 103
Score = 33.1 bits (72), Expect = 4.8
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 144 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKTVSV 269
+D+K+ +K+ R + G L FD +N+VL ++ E TV +
Sbjct: 26 LDEKVYVKMRNERELRGRLHAFDQHLNMVLGDAEETVTTVEI 67
>UniRef50_A4VCU1 Cluster: Small nuclear ribonucleoprotein E,
putative; n=1; Tetrahymena thermophila SB210|Rep: Small
nuclear ribonucleoprotein E, putative - Tetrahymena
thermophila SB210
Length = 140
Score = 33.1 bits (72), Expect = 4.8
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 5/45 (11%)
Frame = +3
Query: 141 FMDKKLSIKL----NAGRAVTGVLRGFDPFMNLVLDESVE-ECKT 260
F+ K++ +++ N + G + GFD +MN+VLDE+ E +CKT
Sbjct: 19 FLQKQVRVQIWLFENTEIKLEGKIIGFDEYMNMVLDETSEVDCKT 63
>UniRef50_Q8SRU9 Cluster: U6 snRNA-ASSOCIATED SMALL
RIBONUCLEOPROTEIN; n=1; Encephalitozoon cuniculi|Rep: U6
snRNA-ASSOCIATED SMALL RIBONUCLEOPROTEIN -
Encephalitozoon cuniculi
Length = 102
Score = 33.1 bits (72), Expect = 4.8
Identities = 12/40 (30%), Positives = 27/40 (67%)
Frame = +3
Query: 129 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
+ +K++++++ + L GR + GV++ FD F ++ LD +E
Sbjct: 11 DYEKYLEQEVVVMLRDGRYLYGVMKSFDQFNSVTLDGVIE 50
>UniRef50_Q6BQK4 Cluster: Similar to CA3420|CaSMX4 Candida albicans
CaSMX4 U6 snRNA-associated Sm-like protein; n=2;
Saccharomycetaceae|Rep: Similar to CA3420|CaSMX4 Candida
albicans CaSMX4 U6 snRNA-associated Sm-like protein -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 88
Score = 33.1 bits (72), Expect = 4.8
Identities = 14/43 (32%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +3
Query: 123 PPELKKF-MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
P +L ++ +D+ + +KL R + G L+G+D N++L ++VE
Sbjct: 13 PLDLVRYQLDELVLVKLRGAREMKGKLQGYDSHCNMILSDAVE 55
>UniRef50_A7DR38 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Like-Sm
ribonucleoprotein, core - Candidatus Nitrosopumilus
maritimus SCM1
Length = 78
Score = 33.1 bits (72), Expect = 4.8
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 132 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
L + +++ + IKL + + G L GFD MNL+LD S E
Sbjct: 10 LDESINQIVLIKLKGNKTIRGNLLGFDQHMNLLLDSSEE 48
>UniRef50_P57670 Cluster: Putative snRNP Sm-like protein; n=4;
Thermoplasmatales|Rep: Putative snRNP Sm-like protein -
Thermoplasma acidophilum
Length = 83
Score = 33.1 bits (72), Expect = 4.8
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 132 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
LK + + + I + R +G+L G+D +MN+VL + E
Sbjct: 14 LKSALSRNVLIDVKGNREYSGILEGYDVYMNIVLQNASE 52
>UniRef50_P62312 Cluster: U6 snRNA-associated Sm-like protein LSm6;
n=22; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm6 - Homo sapiens (Human)
Length = 80
Score = 33.1 bits (72), Expect = 4.8
Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +3
Query: 102 ITMSKAHPPE-LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
+++ K P + LK+ + + + +KLN+G GVL D +MN+ L+++ E
Sbjct: 1 MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEE 50
>UniRef50_Q9LMB5 Cluster: F14D16.28; n=6; core eudicotyledons|Rep:
F14D16.28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 223
Score = 32.7 bits (71), Expect = 6.3
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 132 LKKFMDKKLSIKLNAGRAVTGVLRGFDPF 218
L ++DKKL + L GR + G+LR FD F
Sbjct: 72 LAAYLDKKLLVLLRDGRKLMGLLRSFDQF 100
>UniRef50_Q74ZR8 Cluster: AGR130Wp; n=2; Saccharomycetales|Rep:
AGR130Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 80
Score = 32.7 bits (71), Expect = 6.3
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = +3
Query: 132 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
+ + +++ + + L + R TG L GFD F+N+V+++ VE
Sbjct: 9 IDRAINQPIWVLLTSNREFTGTLVGFDDFVNVVIEDVVE 47
>UniRef50_Q6FJA6 Cluster: Similar to sp|P47093 Saccharomyces
cerevisiae YJR022w pre-mRNA splicing factor; n=1;
Candida glabrata|Rep: Similar to sp|P47093 Saccharomyces
cerevisiae YJR022w pre-mRNA splicing factor - Candida
glabrata (Yeast) (Torulopsis glabrata)
Length = 105
Score = 32.7 bits (71), Expect = 6.3
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 126 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDE 239
P LK++++K + + AG + VL G+D + NLV+ E
Sbjct: 3 PLLKQYLNKDIVVVTTAGEVMHVVLDGYDKYTNLVVKE 40
>UniRef50_Q05E36 Cluster: Putative small nucleolar RNP protein Sm;
n=1; Aeropyrum pernix|Rep: Putative small nucleolar RNP
protein Sm - Aeropyrum pernix
Length = 94
Score = 32.7 bits (71), Expect = 6.3
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 132 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
LK+ ++ ++ +KL G G L D MNL+LD+++E
Sbjct: 16 LKEHLNSQIYVKLKDGSEYVGKLVATDTTMNLILDDAIE 54
>UniRef50_Q9Y4Y9 Cluster: U6 snRNA-associated Sm-like protein LSm5;
n=27; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm5 - Homo sapiens (Human)
Length = 91
Score = 32.7 bits (71), Expect = 6.3
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 111 SKAHPPEL-KKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
S+ P EL K + ++ I + + + + G L GFD F+N+VL++ E
Sbjct: 10 SQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTE 56
>UniRef50_Q9VLV1 Cluster: CG14532-PA; n=1; Drosophila
melanogaster|Rep: CG14532-PA - Drosophila melanogaster
(Fruit fly)
Length = 197
Score = 32.3 bits (70), Expect = 8.3
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +1
Query: 103 LQCQKHIHQN*KNSWTKNCQ*S*MRVALLPVCCAVL 210
LQ +H Q+ + W NCQ M LLP+CCAVL
Sbjct: 68 LQQPQH-QQDDSDLWLHNCQSKSMGRKLLPLCCAVL 102
>UniRef50_Q7QPB0 Cluster: GLP_122_3813_3433; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_122_3813_3433 - Giardia lamblia ATCC
50803
Length = 126
Score = 32.3 bits (70), Expect = 8.3
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 132 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
LK ++ ++S+ L ++TG+L FD MNL+L + E
Sbjct: 57 LKTSLEDRVSVLLQNNSSITGLLASFDEHMNLILINAEE 95
>UniRef50_Q4N631 Cluster: Sm protein, putative; n=1; Theileria
parva|Rep: Sm protein, putative - Theileria parva
Length = 84
Score = 32.3 bits (70), Expect = 8.3
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 144 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKTVSV 269
+D+ + +K GR + G L+ FD N+VL E E TV +
Sbjct: 18 LDEVIYLKCKNGRELVGRLQAFDEHCNMVLSEVTETITTVEL 59
>UniRef50_Q4MZU2 Cluster: U6 snRNA-associated Sm-like protein LSm8,
putative; n=2; Piroplasmida|Rep: U6 snRNA-associated
Sm-like protein LSm8, putative - Theileria parva
Length = 94
Score = 32.3 bits (70), Expect = 8.3
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 126 PELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
P L++F++ + + GR GVL+GFD NLVL +E
Sbjct: 3 PILEQFIECSVFVISVDGRVFVGVLKGFDQLTNLVLYNCLE 43
>UniRef50_A2E014 Cluster: Sm protein; n=2; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 84
Score = 32.3 bits (70), Expect = 8.3
Identities = 14/49 (28%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +3
Query: 108 MSKAHPPE--LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
MS+ P+ ++ M+K++ +K+ G+ + GVL +D N++L + +E
Sbjct: 1 MSEKPMPQDYIRLSMEKRVKVKVQEGQELEGVLHAYDEHYNIILGDVLE 49
>UniRef50_A0C1J5 Cluster: Chromosome undetermined scaffold_142,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_142,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 95
Score = 32.3 bits (70), Expect = 8.3
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 171 NAGRAVTGVLRGFDPFMNLVLDESVE-ECKTVSVTMLG 281
N + G L GFD ++NLVLD +VE + KT + LG
Sbjct: 38 NDNLRIQGKLAGFDEYLNLVLDRAVEYDRKTKATKELG 75
>UniRef50_Q9HPS2 Cluster: SnRNP homolog; n=2; Halobacteriaceae|Rep:
SnRNP homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 69
Score = 32.3 bits (70), Expect = 8.3
Identities = 12/35 (34%), Positives = 25/35 (71%)
Frame = +3
Query: 132 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLD 236
L++ +++ ++++L G TGVL G+D MN+V++
Sbjct: 18 LEESLEETVTVRLKDGDEFTGVLTGYDQHMNVVIE 52
>UniRef50_Q8ZYG5 Cluster: Small nuclear ribonucleoprotein homolog;
n=5; Thermoproteaceae|Rep: Small nuclear
ribonucleoprotein homolog - Pyrobaculum aerophilum
Length = 80
Score = 32.3 bits (70), Expect = 8.3
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +3
Query: 132 LKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVE 248
L+ + K++ +KL + G+LR FD +NL+L+++ E
Sbjct: 16 LQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEE 54
>UniRef50_O26745 Cluster: Putative snRNP Sm-like protein; n=4;
Euryarchaeota|Rep: Putative snRNP Sm-like protein -
Methanobacterium thermoautotrophicum
Length = 81
Score = 32.3 bits (70), Expect = 8.3
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 144 MDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKTVSVT 272
++ + IKL R GVL+ FD MNLVL+++ EE + VT
Sbjct: 22 LNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDA-EELEDGEVT 63
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 469,727,169
Number of Sequences: 1657284
Number of extensions: 8294668
Number of successful extensions: 22754
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 21211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22751
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39154548218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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