Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10484
         (482 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5LJW5 Cluster: CG41114-PB.3; n=3; Drosophila melanogas...    36   0.36 
UniRef50_Q8S829 Cluster: Putative uncharacterized protein OSJNBa...    33   2.6  
UniRef50_Q0IPL5 Cluster: Os12g0188700 protein; n=1; Oryza sativa...    33   3.4  
UniRef50_Q6A7W2 Cluster: Conserved protein; n=1; Propionibacteri...    33   4.5  
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino...    32   5.9  
UniRef50_Q4V3M9 Cluster: IP10544p; n=4; Drosophila melanogaster|...    32   5.9  
UniRef50_Q4QFA9 Cluster: ABC1 transporter-like protein; n=1; Lei...    32   5.9  
UniRef50_A0UP30 Cluster: Putative uncharacterized protein; n=6; ...    32   7.8  
UniRef50_Q5JNR7 Cluster: Putative uncharacterized protein P0702D...    32   7.8  
UniRef50_Q2UNU1 Cluster: H+/oligopeptide symporter; n=2; Aspergi...    32   7.8  
UniRef50_A1C6D2 Cluster: RING finger protein; n=15; Eurotiomycet...    32   7.8  

>UniRef50_Q5LJW5 Cluster: CG41114-PB.3; n=3; Drosophila
           melanogaster|Rep: CG41114-PB.3 - Drosophila melanogaster
           (Fruit fly)
          Length = 338

 Score = 36.3 bits (80), Expect = 0.36
 Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = -3

Query: 345 LRYSEY*LC-GYKRGFRNGVRS*DRLGAGRERDAKRDKSSGGKWCRRAGGRCWWTSRSSL 169
           +RY  +  C G +R  + G R      AGR R      S GGK CRR  GR  W  + S 
Sbjct: 253 MRYRHHLSCRGRRRARKRGSRRHGHATAGRRRWTV---SGGGK-CRRKTGRSGWPRKPSA 308

Query: 168 RDRRG 154
           + RRG
Sbjct: 309 KGRRG 313


>UniRef50_Q8S829 Cluster: Putative uncharacterized protein
           OSJNBa0053D03.28; n=1; Oryza sativa|Rep: Putative
           uncharacterized protein OSJNBa0053D03.28 - Oryza sativa
           (Rice)
          Length = 911

 Score = 33.5 bits (73), Expect = 2.6
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -3

Query: 276 RLGAGRERDAKRDKSSGGKWCRRA-GGRCWW 187
           R G G  R  KR+ S+GG+W RR  GG   W
Sbjct: 236 RRGGGGRRSGKREASAGGRWPRRGRGGMVKW 266


>UniRef50_Q0IPL5 Cluster: Os12g0188700 protein; n=1; Oryza sativa
           (japonica cultivar-group)|Rep: Os12g0188700 protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 99

 Score = 33.1 bits (72), Expect = 3.4
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -3

Query: 243 RDKSSGGKWCRRAGGRCWWTSRSSLRDRRG 154
           R + +G  WC  A  RCWW+S     DR G
Sbjct: 70  RTRRTGTAWCWGARRRCWWSSGHRGADRAG 99


>UniRef50_Q6A7W2 Cluster: Conserved protein; n=1; Propionibacterium
           acnes|Rep: Conserved protein - Propionibacterium acnes
          Length = 392

 Score = 32.7 bits (71), Expect = 4.5
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = -3

Query: 264 GRERDAKRDKSSGGKWCRRAGGRCWWTSRSSLRDRRG 154
           GR    +R     G W  ++GGR  WTS+S  RDRRG
Sbjct: 10  GRSGGGRRGPGRNG-WSSKSGGRGGWTSKS--RDRRG 43


>UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3;
           Actinomycetales|Rep: ATP-dependent RNA helicase -
           Propionibacterium acnes
          Length = 700

 Score = 32.3 bits (70), Expect = 5.9
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = -3

Query: 279 DRLGAGRERDAKRDKSSGGKWCRRAGGRCWWTSRSSLRDRR 157
           DR G  R+RD   D+ +GG+   R   R W   R S RD R
Sbjct: 144 DRRGQRRDRDDHWDRRNGGRDFDRRDSRNWREDRHSWRDDR 184


>UniRef50_Q4V3M9 Cluster: IP10544p; n=4; Drosophila
           melanogaster|Rep: IP10544p - Drosophila melanogaster
           (Fruit fly)
          Length = 399

 Score = 32.3 bits (70), Expect = 5.9
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
 Frame = -3

Query: 321 CGYKRGFRNGVRS*DRLGAGRERDAKRDKSSGGKWCRRAG---GRCWWTSRSSLRDRRGC 151
           C  +  +++G  S D     RE+D   D+  G  W R  G    R     R+++RDR  C
Sbjct: 79  CTTRPSYQSGCESMDESARDREKDRNIDRDRGRDWDRNRGCDRNRDRDKDRNNIRDRDNC 138


>UniRef50_Q4QFA9 Cluster: ABC1 transporter-like protein; n=1;
            Leishmania major|Rep: ABC1 transporter-like protein -
            Leishmania major
          Length = 2691

 Score = 32.3 bits (70), Expect = 5.9
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -3

Query: 228  GGKWCRRAGGRCWWTSRSSLRDRRGCWS 145
            G  WCR  GG   W  R+   D+RG W+
Sbjct: 1874 GAWWCRCCGGSRCWRHRTQRADQRGRWA 1901


>UniRef50_A0UP30 Cluster: Putative uncharacterized protein; n=6;
           Burkholderia|Rep: Putative uncharacterized protein -
           Burkholderia multivorans ATCC 17616
          Length = 703

 Score = 31.9 bits (69), Expect = 7.8
 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
 Frame = -3

Query: 300 RNGVRS*D-RLGAGRE-RDAKRDKSS---GGKWCRRAGGRCWWTSRSSLRDRR 157
           RNG R+ D R G+GR  R A R  ++   GG+WC      CW      LR  R
Sbjct: 648 RNGARARDGRRGSGRTCRPAGRYGAAAGRGGRWCPENASSCWAGQCDGLRPSR 700


>UniRef50_Q5JNR7 Cluster: Putative uncharacterized protein
           P0702D12.7; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0702D12.7 - Oryza sativa subsp. japonica (Rice)
          Length = 178

 Score = 31.9 bits (69), Expect = 7.8
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = -3

Query: 264 GRERDAKRDKSSGGKWCRRAGG 199
           GRE+  +RDK++GG+  RRAGG
Sbjct: 21  GREKGRRRDKATGGEKGRRAGG 42


>UniRef50_Q2UNU1 Cluster: H+/oligopeptide symporter; n=2;
           Aspergillus|Rep: H+/oligopeptide symporter - Aspergillus
           oryzae
          Length = 550

 Score = 31.9 bits (69), Expect = 7.8
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
 Frame = +3

Query: 204 LPYGTTYRHYSYRV*RPAPDQPLACPNS*PRSGTL--SCNHIISIRCNVM 347
           L + T  + + YR   P PD PLACP+S  ++GT+    N  + + C V+
Sbjct: 418 LAWATGLQAFIYRA-GPCPDHPLACPDS--KNGTIPQHINVFLQVPCYVL 464


>UniRef50_A1C6D2 Cluster: RING finger protein; n=15;
           Eurotiomycetidae|Rep: RING finger protein - Aspergillus
           clavatus
          Length = 846

 Score = 31.9 bits (69), Expect = 7.8
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +2

Query: 38  EPALGGQRPASAHYVQQHGGAPHRQRPRGLL 130
           EPA+GG RP S  + Q   G+P  +R  GLL
Sbjct: 309 EPAVGGSRPTSPLFSQSAQGSPASRRLPGLL 339


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 254,967,331
Number of Sequences: 1657284
Number of extensions: 3795618
Number of successful extensions: 10461
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 10132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10446
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27710252790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)