Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10458
         (817 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9UW24 Cluster: Phosphatidylinositol 4-kinase PIK1a; n=...    34   3.7  
UniRef50_Q3T2L2 Cluster: Aryl hydrocarbon receptor repressor 2; ...    34   4.9  
UniRef50_A4KR85 Cluster: Histidine decarboxylase; n=11; Francise...    34   4.9  
UniRef50_Q184C8 Cluster: Putative phage essential recombination ...    33   6.5  

>UniRef50_Q9UW24 Cluster: Phosphatidylinositol 4-kinase PIK1a; n=3;
           Saccharomycetales|Rep: Phosphatidylinositol 4-kinase
           PIK1a - Candida albicans (Yeast)
          Length = 956

 Score = 34.3 bits (75), Expect = 3.7
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = -2

Query: 525 IEIKYTKKIVMGQLRIDISQNYCRTIDNEELQVISGMRNDKITYV-YVRILNISTTKDL* 349
           ++ KY+KK +   L++D S+NY  T D EEL  +  +   KI  + Y  +        + 
Sbjct: 227 LKTKYSKKKISAALQLDDSENY--TTDEEELGYVQTLSRPKIREMKYTEVEENLKINTII 284

Query: 348 KGKLERKKSSKTQLS 304
           + K  R K++   +S
Sbjct: 285 RSKKNRSKTTVNSIS 299


>UniRef50_Q3T2L2 Cluster: Aryl hydrocarbon receptor repressor 2;
           n=4; Danio rerio|Rep: Aryl hydrocarbon receptor
           repressor 2 - Danio rerio (Zebrafish) (Brachydanio
           rerio)
          Length = 573

 Score = 33.9 bits (74), Expect = 4.9
 Identities = 20/44 (45%), Positives = 22/44 (50%)
 Frame = +1

Query: 490 PHYYFFCIFYFNSVKKVIKFSTYTLGYHVVLLAFRAGRPRVCVL 621
           P YY +C FY      V   S YT G+H  L A    RPR CVL
Sbjct: 448 PEYYDYCSFYQKGKTTV---SPYTNGHHKYLCA-GVSRPRKCVL 487


>UniRef50_A4KR85 Cluster: Histidine decarboxylase; n=11; Francisella
           tularensis|Rep: Histidine decarboxylase - Francisella
           tularensis subsp. holarctica 257
          Length = 378

 Score = 33.9 bits (74), Expect = 4.9
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
 Frame = -2

Query: 474 ISQNYCRTIDNEELQVISGMRND-KITYVYVRILNISTTKDL*KGKLERKKSSKTQLSV 301
           ISQNY   IDN+++  I G RN      +Y RIL++ + K L +   E    S+T L++
Sbjct: 241 ISQNYVEYIDNDDM-TIGGSRNGLSAVLLYNRILSLGSKKGLIQRYQECLDKSETFLTI 298


>UniRef50_Q184C8 Cluster: Putative phage essential recombination
           function protein; n=1; Clostridium difficile 630|Rep:
           Putative phage essential recombination function protein
           - Clostridium difficile (strain 630)
          Length = 199

 Score = 33.5 bits (73), Expect = 6.5
 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = -2

Query: 444 NEELQVISGMRNDKITYVYVRILNI--STTKDL*KGKLERKKSSKTQL 307
           + ELQ + G+   +  Y+Y+++LNI  S T D   GK E K +S  ++
Sbjct: 96  SNELQALGGIETYQTRYLYIQLLNITESDTFDATSGKNEAKSNSNNRI 143


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 733,724,995
Number of Sequences: 1657284
Number of extensions: 13705532
Number of successful extensions: 30457
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30449
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70789333940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)