Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10456
(732 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 167 3e-40
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 164 2e-39
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 146 4e-34
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 123 5e-27
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 110 3e-23
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 98 2e-19
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 96 7e-19
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 94 3e-18
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 93 8e-18
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 87 4e-16
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 82 2e-14
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 79 8e-14
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 75 2e-12
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 73 6e-12
UniRef50_P93779 Cluster: 60S ribosomal protein L5; n=4; Spermato... 67 4e-10
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 55 2e-06
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 51 3e-05
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 49 1e-04
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 47 4e-04
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 47 5e-04
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 42 0.021
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 41 0.027
UniRef50_UPI00005A2328 Cluster: PREDICTED: hypothetical protein ... 39 0.11
UniRef50_Q4V5W2 Cluster: IP11866p; n=3; Drosophila melanogaster|... 38 0.33
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 37 0.44
UniRef50_A5DIV0 Cluster: Putative uncharacterized protein; n=1; ... 36 0.77
UniRef50_Q7RWY4 Cluster: Putative uncharacterized protein NCU087... 34 3.1
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 34 4.1
UniRef50_Q4SUL3 Cluster: Chromosome 4 SCAF13876, whole genome sh... 33 5.5
UniRef50_Q4A574 Cluster: Putative uncharacterized protein; n=3; ... 33 5.5
UniRef50_Q54X29 Cluster: Putative uncharacterized protein; n=1; ... 33 7.2
UniRef50_Q4R8L0 Cluster: Testis cDNA clone: QtsA-12228, similar ... 33 9.5
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 167 bits (405), Expect = 3e-40
Identities = 72/84 (85%), Positives = 81/84 (96%)
Frame = +3
Query: 258 TDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPG 437
T+VTG+E+NVEPVD+GPGAFRC+LDVGLARTTTGARVFGAMKGAVDGGLN+PHS+KRFPG
Sbjct: 123 TEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRFPG 182
Query: 438 YDAESKKFNAEVHRAHIFGLHVAD 509
Y AE+K FNA+VHRAHIFG HVAD
Sbjct: 183 YSAETKSFNADVHRAHIFGQHVAD 206
Score = 131 bits (316), Expect = 2e-29
Identities = 61/100 (61%), Positives = 73/100 (73%)
Frame = +1
Query: 7 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 186
QDKNKYNTPKYRLIVRLSNKD+T Q+AY+RIEGD +VCAAYSHELP+YG++VGLTNYAAA
Sbjct: 39 QDKNKYNTPKYRLIVRLSNKDITVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAA 98
Query: 187 YSTGXXXXXXXXXXXXXDTLYTGQQMSQVMNTMLNLSTMD 306
Y TG D+LY G ++V N+ +D
Sbjct: 99 YCTGLLVARRVLNKLGLDSLYAG--CTEVTGEEFNVEPVD 136
Score = 105 bits (253), Expect = 8e-22
Identities = 47/74 (63%), Positives = 60/74 (81%)
Frame = +2
Query: 509 YMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQK 688
YMRSLE++DE+SFKRQFS+YIKLG+ AD +E IYKKAH+AIR DP+HK K +V +K
Sbjct: 207 YMRSLEEEDEESFKRQFSRYIKLGIRADDLEDIYKKAHQAIRNDPTHKVTAKKSSAVTKK 266
Query: 689 RWNKRQLTLAERKT 730
RWN ++LT +RKT
Sbjct: 267 RWNAKKLTNEQRKT 280
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 164 bits (398), Expect = 2e-39
Identities = 74/88 (84%), Positives = 77/88 (87%)
Frame = +3
Query: 246 IHWTTDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIK 425
+ TTDV GDEYNVE V+NGPGAFRCYLDVGL RTTTGA VF AMKGAVDGGLN+PHS K
Sbjct: 88 VKXTTDVNGDEYNVESVENGPGAFRCYLDVGLNRTTTGACVFAAMKGAVDGGLNIPHSTK 147
Query: 426 RFPGYDAESKKFNAEVHRAHIFGLHVAD 509
RFPGYDAESK FNAE HRAHIFG HVAD
Sbjct: 148 RFPGYDAESKTFNAEAHRAHIFGQHVAD 175
Score = 108 bits (260), Expect = 1e-22
Identities = 46/53 (86%), Positives = 51/53 (96%)
Frame = +1
Query: 1 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVK 159
+VQDKNKYNTPKYRLIVR SN+D+TCQ+AYSRIEGD I+CAAYSHELPRYGVK
Sbjct: 37 IVQDKNKYNTPKYRLIVRFSNRDITCQIAYSRIEGDKILCAAYSHELPRYGVK 89
Score = 97.1 bits (231), Expect = 4e-19
Identities = 47/73 (64%), Positives = 56/73 (76%)
Frame = +2
Query: 509 YMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQK 688
YM +LE +D ++FKRQFS+YIKLG+ AD IE IYKKAH+AIRADPS KK E K + K+K
Sbjct: 176 YMHALEDEDAEAFKRQFSQYIKLGIAADQIETIYKKAHDAIRADPSIKKVE-KPEPAKKK 234
Query: 689 RWNKRQLTLAERK 727
RWN L AERK
Sbjct: 235 RWNHVXLXHAERK 247
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 146 bits (355), Expect = 4e-34
Identities = 64/83 (77%), Positives = 73/83 (87%)
Frame = +3
Query: 261 DVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY 440
+VTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGY
Sbjct: 124 EVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGY 183
Query: 441 DAESKKFNAEVHRAHIFGLHVAD 509
D+ESK+FNAEVHR HI G +VAD
Sbjct: 184 DSESKEFNAEVHRKHIMGQNVAD 206
Score = 131 bits (316), Expect = 2e-29
Identities = 60/102 (58%), Positives = 75/102 (73%)
Frame = +1
Query: 1 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 180
V+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 181 AAYSTGXXXXXXXXXXXXXDTLYTGQQMSQVMNTMLNLSTMD 306
AAY TG D +Y GQ +V N+ ++D
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQ--VEVTGDEYNVESID 136
Score = 86.2 bits (204), Expect = 7e-16
Identities = 39/73 (53%), Positives = 57/73 (78%)
Frame = +2
Query: 509 YMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQK 688
YMR L ++DED++K+QFS+YIK VT D +E +YKKAH AIR +P ++KK K VK+K
Sbjct: 207 YMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKK--PKKEVKKK 264
Query: 689 RWNKRQLTLAERK 727
RWN+ +++LA++K
Sbjct: 265 RWNRPKMSLAQKK 277
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 123 bits (296), Expect = 5e-27
Identities = 56/86 (65%), Positives = 66/86 (76%)
Frame = +1
Query: 4 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 183
VQDKNKYNTPKYRLIVR++NKDV Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAA
Sbjct: 38 VQDKNKYNTPKYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAA 97
Query: 184 AYSTGXXXXXXXXXXXXXDTLYTGQQ 261
AY+TG D+ Y G +
Sbjct: 98 AYATGLLLARRHLKTIGLDSTYKGHE 123
Score = 106 bits (255), Expect = 5e-22
Identities = 49/84 (58%), Positives = 62/84 (73%), Gaps = 1/84 (1%)
Frame = +3
Query: 261 DVTGDEYNVEPV-DNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPG 437
++TG++YNVE D P F+ LD+GLARTTTG+++F MKG DGG+NVPHS RF G
Sbjct: 124 ELTGEDYNVEEEGDRAP--FKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRFFG 181
Query: 438 YDAESKKFNAEVHRAHIFGLHVAD 509
+D ESK++NAE HR I G HVAD
Sbjct: 182 FDQESKEYNAEAHRDRILGKHVAD 205
Score = 68.1 bits (159), Expect = 2e-10
Identities = 35/73 (47%), Positives = 47/73 (64%)
Frame = +2
Query: 509 YMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQK 688
YM L+++DED +KRQFSK++ G+ AD + A Y+K H AIRAD S K+ K S K
Sbjct: 206 YMTYLKEEDEDRYKRQFSKFLAAGLNADNLVATYQKVHSAIRADASPAAKKAAKPS---K 262
Query: 689 RWNKRQLTLAERK 727
R ++LT ERK
Sbjct: 263 RHTAKRLTYDERK 275
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 110 bits (265), Expect = 3e-23
Identities = 44/66 (66%), Positives = 55/66 (83%)
Frame = +1
Query: 1 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 180
+ QDKNKYN+PKYR +VR +N+DV CQV Y+ + GD +CAAYSHELP+YG+K GLTNYA
Sbjct: 46 ITQDKNKYNSPKYRFVVRFTNRDVVCQVVYATLSGDVTICAAYSHELPKYGMKAGLTNYA 105
Query: 181 AAYSTG 198
A Y+TG
Sbjct: 106 ATYATG 111
Score = 92.7 bits (220), Expect = 8e-18
Identities = 42/84 (50%), Positives = 58/84 (69%)
Frame = +3
Query: 258 TDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPG 437
T+ G++Y+VE D F+C+LD GL RT+TGARVF A+KGAVDGGL++PH+ KRF G
Sbjct: 132 TEDLGEDYHVEQGDEEARPFKCFLDTGLVRTSTGARVFAALKGAVDGGLDIPHNEKRFAG 191
Query: 438 YDAESKKFNAEVHRAHIFGLHVAD 509
YD + K + + +I G VA+
Sbjct: 192 YDLQDKSHDPDTLERYIKGGVVAE 215
Score = 42.7 bits (96), Expect = 0.009
Identities = 17/54 (31%), Positives = 32/54 (59%)
Frame = +2
Query: 509 YMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKK 670
Y +++++ + F++ F+KY+ +E ++ EAIR DP+H+KKE K
Sbjct: 216 YAEEMQEEEPEKFEQHFAKYLAEDFDPTELEDAMEEVFEAIREDPTHEKKERVK 269
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 97.9 bits (233), Expect = 2e-19
Identities = 44/65 (67%), Positives = 50/65 (76%)
Frame = +3
Query: 315 FRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFG 494
F+ LDVGLARTTTGARVFG +KGAVDGG+ VPH RFPGY+ E +A+VHR IFG
Sbjct: 171 FKAILDVGLARTTTGARVFGVLKGAVDGGMAVPHRPNRFPGYNKEKSSLDAKVHRDRIFG 230
Query: 495 LHVAD 509
HVAD
Sbjct: 231 KHVAD 235
Score = 96.7 bits (230), Expect = 5e-19
Identities = 39/66 (59%), Positives = 55/66 (83%)
Frame = +1
Query: 1 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 180
V+QDK K+ +PKYRL+VR++NKD+ Q+ ++I GD +V AAY+HELP +G++ GLTNYA
Sbjct: 60 VLQDKTKFGSPKYRLVVRITNKDIIAQIVQAKIVGDEVVMAAYAHELPAFGIEHGLTNYA 119
Query: 181 AAYSTG 198
AAY+TG
Sbjct: 120 AAYATG 125
Score = 56.4 bits (130), Expect = 7e-07
Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Frame = +2
Query: 554 QFSKYIKLGVTADAIEAIYKKAHEAIRADPSHK-KKELKKDSVKQKRWNKRQLTLAERK 727
QFSKY+ V ++IE +YKKAH AIRADPS K+ KK+ V K + ++L+ AE++
Sbjct: 254 QFSKYMAAKVLPESIEGMYKKAHAAIRADPSKSLPKKAKKEGVAHKSYKTKKLSGAEKR 312
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 96.3 bits (229), Expect = 7e-19
Identities = 47/91 (51%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Frame = +3
Query: 261 DVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY 440
+V G+ Y+VE +N F+ LDVG+ TTG RVFGA+KGA DGGL+VPHS KRFPGY
Sbjct: 73 EVDGEVYHVEEEENERRPFKALLDVGVKNVTTGNRVFGALKGACDGGLHVPHSEKRFPGY 132
Query: 441 DAESKK---FNAEVHRAHIFGLHVADT*EVL 524
+ + ++A+ HR IFG HVA E L
Sbjct: 133 SVDEENNGTYDAQAHRDRIFGAHVASYMEYL 163
Score = 60.5 bits (140), Expect = 4e-08
Identities = 31/68 (45%), Positives = 39/68 (57%)
Frame = +1
Query: 55 LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXX 234
++NK V CQV S + GD + +A S EL YGVKVGLTNYAAAY TG
Sbjct: 4 VTNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLK 63
Query: 235 XDTLYTGQ 258
D+ + G+
Sbjct: 64 LDSQFVGK 71
Score = 54.8 bits (126), Expect = 2e-06
Identities = 28/68 (41%), Positives = 41/68 (60%)
Frame = +2
Query: 509 YMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQK 688
YM L+++D + +++QFS Y+K G+ + A+E +Y KAHE IR +P K K VK
Sbjct: 159 YMEYLKEEDPERYRKQFSAYLKHGLESSALEDMYLKAHENIRKNPVRPTK--PKREVKHV 216
Query: 689 RWNKRQLT 712
R R LT
Sbjct: 217 REGNRVLT 224
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 94.3 bits (224), Expect = 3e-18
Identities = 40/86 (46%), Positives = 57/86 (66%)
Frame = +1
Query: 1 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 180
++QDK+KYNTPKYRL+ R +N + Q+ Y+ ++ D ++CAA S+EL R+GV GL +YA
Sbjct: 326 IIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCAADSYELKRFGVSTGLASYA 385
Query: 181 AAYSTGXXXXXXXXXXXXXDTLYTGQ 258
AAY+TG DT+Y GQ
Sbjct: 386 AAYATGLLLARRLLKQIGLDTVYAGQ 411
Score = 91.9 bits (218), Expect = 1e-17
Identities = 44/87 (50%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Frame = +3
Query: 258 TDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPG 437
T V G +NV+ F+ LD GL RTTTG RVFG +KGA DGG+N+PHS RFPG
Sbjct: 412 TKVDGAYFNVDEDQKEKKPFKAILDAGLVRTTTGNRVFGVLKGACDGGINIPHSESRFPG 471
Query: 438 Y-----DAESKKFNAEVHRAHIFGLHV 503
Y + ES K+ E H+A IFG H+
Sbjct: 472 YVRASDEGESSKYKPEDHKARIFGKHI 498
Score = 50.0 bits (114), Expect = 6e-05
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Frame = +2
Query: 509 YMRSLEQDDEDSFKRQFSKYIKL--GVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVK 682
YM+ L+ ++F++QFSK+ K D++E ++ K H IR +P K K D K
Sbjct: 501 YMKHLKGQSNEAFQKQFSKWSKTLEAAKVDSVEKLFTKVHAEIRKNPERVKSTKKNDKPK 560
Query: 683 Q--KRWNKRQLTLAERK 727
+ K++ +LT A+RK
Sbjct: 561 RDHKKFYPTKLTAAQRK 577
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 92.7 bits (220), Expect = 8e-18
Identities = 42/87 (48%), Positives = 56/87 (64%)
Frame = +1
Query: 1 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 180
+VQDK+KYN+PKYR +VR +N + CQV Y+ ++GD +V AA S EL R+G+ GLTNYA
Sbjct: 37 IVQDKDKYNSPKYRFVVRHTNTKIICQVIYATLKGDKVVAAAESTELKRFGLTSGLTNYA 96
Query: 181 AAYSTGXXXXXXXXXXXXXDTLYTGQQ 261
AAY+TG D Y G +
Sbjct: 97 AAYATGLLLARRTLKTLKMDKFYEGNK 123
Score = 78.2 bits (184), Expect = 2e-13
Identities = 33/66 (50%), Positives = 49/66 (74%), Gaps = 3/66 (4%)
Frame = +3
Query: 315 FRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAES---KKFNAEVHRAH 485
F LD+GL R+T G RVF A+KGA DGG+++PH+ +RFPG+ ++ +K++A VH+
Sbjct: 137 FFAVLDIGLVRSTLGNRVFAALKGAADGGIHIPHNNRRFPGFSVDNDKKEKYDANVHKDR 196
Query: 486 IFGLHV 503
IFG+HV
Sbjct: 197 IFGVHV 202
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 87.0 bits (206), Expect = 4e-16
Identities = 40/66 (60%), Positives = 48/66 (72%)
Frame = +1
Query: 1 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 180
++QDKNKYN K R IVR +N + CQ+A S IEGD I+ A S EL RYG+ VGL NYA
Sbjct: 37 ILQDKNKYNAQKLRFIVRKTNNQIICQIASSHIEGDKILSEAKSKELIRYGIPVGLKNYA 96
Query: 181 AAYSTG 198
AAY+TG
Sbjct: 97 AAYATG 102
Score = 78.6 bits (185), Expect = 1e-13
Identities = 36/64 (56%), Positives = 45/64 (70%)
Frame = +3
Query: 318 RCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGL 497
+ +LDVG+ RTTTG RVF A+KGA DGGLN+PH RFPG +FN E R +I G+
Sbjct: 146 KAFLDVGITRTTTGNRVFAALKGACDGGLNIPHGNNRFPG---SKNEFNPEQLRKNILGI 202
Query: 498 HVAD 509
HVA+
Sbjct: 203 HVAE 206
Score = 50.0 bits (114), Expect = 6e-05
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +2
Query: 509 YMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHK-KKELKKDSVKQ 685
YM S++++D D +K F+ Y+K + + IE +Y AHE IR +P K KK KK K
Sbjct: 207 YMASMKEEDMDKYKAHFNDYLKHKIDENNIEKMYLTAHEKIRKNPEKKAKKAGKKFIAKH 266
Query: 686 KRWNKRQLTLAERK 727
++ K L +++
Sbjct: 267 QKPTKLNAKLRKQR 280
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 81.8 bits (193), Expect = 2e-14
Identities = 34/66 (51%), Positives = 46/66 (69%)
Frame = +1
Query: 1 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 180
+ QDK KY KYRL+ R++N V Q+ + + GD VC A S ELP+YG+K+GL+NY
Sbjct: 36 IQQDKTKYGAAKYRLVARITNTKVIAQIVVAELTGDKTVCQALSTELPKYGIKLGLSNYP 95
Query: 181 AAYSTG 198
AAY+TG
Sbjct: 96 AAYATG 101
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/71 (42%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Frame = +2
Query: 509 YMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSH---KKKELKKDSV 679
YMR L+++ E+ + +QFS+Y+K G+TAD++E IYK AH AIR +P+ K+ + +
Sbjct: 213 YMRKLKKESEEKYNKQFSRYVKAGITADSLEKIYKDAHAAIRKNPAATVIADKKKHAEEM 272
Query: 680 KQKRWNKRQLT 712
KQK K+ T
Sbjct: 273 KQKHAPKKPQT 283
Score = 63.3 bits (147), Expect = 6e-09
Identities = 32/57 (56%), Positives = 42/57 (73%)
Frame = +3
Query: 258 TDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKR 428
T++T +EY + + P F+ LDVGLARTTTGA+VF MKGAVDGGL +PH++ R
Sbjct: 120 TEIT-EEYLNDEENRRP--FKVILDVGLARTTTGAKVFAVMKGAVDGGLFIPHNVCR 173
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 79.4 bits (187), Expect = 8e-14
Identities = 37/58 (63%), Positives = 45/58 (77%)
Frame = +3
Query: 336 GLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAD 509
GLARTTTG +VFGA+K VD GL++PHS K FPGYD+ SK+FNAEV+ I G +V D
Sbjct: 71 GLARTTTGNKVFGALKEPVDCGLSIPHSTKCFPGYDSVSKEFNAEVYCKDIMGQNVVD 128
Score = 76.6 bits (180), Expect = 6e-13
Identities = 36/71 (50%), Positives = 45/71 (63%)
Frame = +1
Query: 43 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 222
+IV +N+ + CQ+AY+ E D IVCAAY+HELP+ GVKVGLTNYAAAY G
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVGLTNYAAAYCIGLLLAHRLL 60
Query: 223 XXXXXDTLYTG 255
D +Y G
Sbjct: 61 NRFGMDKIYEG 71
Score = 35.1 bits (77), Expect = 1.8
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 509 YMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAI 607
YM L ++DED++K+Q +YIK +T D +E I
Sbjct: 129 YMCFLMEEDEDAYKKQSLEYIKNNITPDMMEEI 161
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/87 (41%), Positives = 56/87 (64%)
Frame = +3
Query: 276 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 455
+Y+VE NG F +L+VGL +T+ G VFG +K A+DG LN+PH+ +RF G ++K
Sbjct: 43 DYSVEST-NGKRPFYAFLNVGLVKTSIGNCVFGVLKEALDGSLNIPHNDRRFVGSSKDNK 101
Query: 456 KFNAEVHRAHIFGLHVADT*EVLNRMM 536
+ +A+VHR I+G +V+ E L +
Sbjct: 102 QLDAKVHRKSIYGGYVSAYIETLKTFL 128
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 73.3 bits (172), Expect = 6e-12
Identities = 36/83 (43%), Positives = 53/83 (63%)
Frame = +3
Query: 261 DVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY 440
++ G + +D A R +LD+GLAR+T GARVFGA+KGA D GLNVPHS +F G+
Sbjct: 117 EIDGTYSVTKDIDGEKKAPRVFLDIGLARSTRGARVFGALKGASDAGLNVPHSAAKFYGH 176
Query: 441 DAESKKFNAEVHRAHIFGLHVAD 509
+ F+A+ IFG ++++
Sbjct: 177 KPDG-SFDAKELHDRIFGYNISE 198
Score = 68.9 bits (161), Expect = 1e-10
Identities = 31/86 (36%), Positives = 49/86 (56%)
Frame = +1
Query: 7 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 186
QD N + K+RL+VR++ V CQ+ + ++GD ++ A S EL RYG+ G TNY+AA
Sbjct: 33 QDSNSCGSVKHRLVVRITGSRVICQIVAAYMDGDRVMVYADSRELERYGINFGATNYSAA 92
Query: 187 YSTGXXXXXXXXXXXXXDTLYTGQQM 264
Y+TG D +Y +++
Sbjct: 93 YATGFLIGRRALTAMSLDEVYRPKEI 118
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/72 (43%), Positives = 42/72 (58%)
Frame = +2
Query: 509 YMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQK 688
YM+ L D + +K QFS YIK G+ + I IYK A + I DP+ KKKE KD K
Sbjct: 199 YMKQLRDGDPEKYKTQFSSYIKKGIDPEEIPRIYKSAFDKIAEDPTRKKKE-TKDYSGFK 257
Query: 689 RWNKRQLTLAER 724
++ + +LT ER
Sbjct: 258 KYKQARLTYEER 269
>UniRef50_P93779 Cluster: 60S ribosomal protein L5; n=4;
Spermatophyta|Rep: 60S ribosomal protein L5 - Solanum
melongena (Eggplant) (Aubergine)
Length = 121
Score = 67.3 bits (157), Expect = 4e-10
Identities = 33/73 (45%), Positives = 45/73 (61%)
Frame = +2
Query: 509 YMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQK 688
YM L +D+ + ++ FS YIK + D IE +YKK H AIR DPS KK + K+ K
Sbjct: 25 YMNILMEDEPEKYQSHFSSYIKADLAPDNIEEMYKKVHAAIRPDPSPKKSQ-KQPPKTHK 83
Query: 689 RWNKRQLTLAERK 727
R+N ++LT ERK
Sbjct: 84 RYNLKKLTYEERK 96
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 55.2 bits (127), Expect = 2e-06
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +1
Query: 7 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGD 108
QDKNKYNTPKYR +VR +NKD+T Q+ + I GD
Sbjct: 50 QDKNKYNTPKYRFVVRFTNKDITAQIISASIAGD 83
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 51.2 bits (117), Expect = 3e-05
Identities = 27/57 (47%), Positives = 36/57 (63%)
Frame = +3
Query: 264 VTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 434
+TG + V+ ++ G G LD+GLAR GARVF A+KGAVD GL+VP+ P
Sbjct: 84 LTGMLFAVKALNAGYG--EAILDIGLARAKPGARVFAALKGAVDAGLDVPYGESILP 138
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +1
Query: 40 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 198
R++VR +N+ + Q+ +EGD + AAYS EL YG + + AAY TG
Sbjct: 34 RMVVRKTNRQIIVQLVVPEVEGDSTLVAAYSAELAGYGYEGSTASTPAAYLTG 86
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +3
Query: 309 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPG 437
G LDVGL + G+RVF A+KGA+D G+ +PHS + PG
Sbjct: 98 GVREAVLDVGLHKPVKGSRVFAALKGALDAGVEIPHSEEILPG 140
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +1
Query: 34 KYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHEL-PRYGVKVGLTNYAAAYSTG 198
K R+ VR+SN+ + Q +RIEGD ++ AA+S EL ++G K N AAY TG
Sbjct: 32 KPRMAVRISNEYLWVQFLEARIEGDRVIAAAHSRELIKKFGWKGDGNNTCAAYLTG 87
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +3
Query: 309 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 434
G LDVGLA T+G RVF A++G VD GL++PH P
Sbjct: 100 GHSEAVLDVGLAAATSGNRVFAALRGMVDAGLDIPHGADVLP 141
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 46.8 bits (106), Expect = 5e-04
Identities = 21/64 (32%), Positives = 36/64 (56%)
Frame = +1
Query: 7 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 186
QDK K+ K R+I+R S ++++ Q+ S ++GD I+ ++Y L + K NY +
Sbjct: 39 QDKKKFENKKKRIIIRFSKRNLSLQMVNSNVDGDFILLSSYLKNLSKLEYKNLTNNYPFS 98
Query: 187 YSTG 198
Y G
Sbjct: 99 YLLG 102
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Frame = +3
Query: 327 LDVGLARTTTGARVFGAMKGAVDGGLNVPHS---IKRFPGYDAESKK-FNAEVHRAHI 488
+D+GL R T G + F +MKG+VD G+N+PH+ I + + +SK+ FN HI
Sbjct: 132 IDIGLKRATIGNKSFASMKGSVDSGINIPHNYNKIFKVKNNEIDSKELFNERSKGIHI 189
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 41.5 bits (93), Expect = 0.021
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 309 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 419
G LD+GL T G++VF +GA+D GL++PH+
Sbjct: 97 GVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHN 133
Score = 39.5 bits (88), Expect = 0.083
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +1
Query: 34 KYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 198
K RL+ R SNK V Q+ GD + +A+S +L YG + N +AY TG
Sbjct: 32 KPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTG 86
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 41.1 bits (92), Expect = 0.027
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 327 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 434
LD+GL ++ G+RV+ A+KG VD G +P S FP
Sbjct: 103 LDIGLQASSAGSRVYAALKGIVDSGFEIPCSSDVFP 138
Score = 37.1 bits (82), Expect = 0.44
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +1
Query: 40 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 198
R++VR S ++V Q+ EGD +A S EL +YG N AAY TG
Sbjct: 34 RVVVRKSARNVQIQLLAPTPEGDITYSSAVSSELAKYGYTGATGNTTAAYLTG 86
>UniRef50_UPI00005A2328 Cluster: PREDICTED: hypothetical protein
XP_853470; n=1; Canis lupus familiaris|Rep: PREDICTED:
hypothetical protein XP_853470 - Canis familiaris
Length = 204
Score = 39.1 bits (87), Expect = 0.11
Identities = 27/89 (30%), Positives = 35/89 (39%)
Frame = -3
Query: 412 GTLRPPSTAPFIAPKTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVVQCIRCQV 233
GT R S A + +P R+P V P + PGP T P S +Q R
Sbjct: 35 GTRRLASIAGYTSPTDRSPRVFLTGPRCRRRRERPGPPETSQRQDRGPAASALQTYRAPK 94
Query: 232 QVFEAVFVLIADQLNMLQHNLSDQPSHHN 146
Q EAV L + ++ PS HN
Sbjct: 95 QP-EAVKATSGAPLRQTPYKMAAAPSPHN 122
>UniRef50_Q4V5W2 Cluster: IP11866p; n=3; Drosophila
melanogaster|Rep: IP11866p - Drosophila melanogaster
(Fruit fly)
Length = 540
Score = 37.5 bits (83), Expect = 0.33
Identities = 30/110 (27%), Positives = 45/110 (40%)
Frame = -3
Query: 409 TLRPPSTAPFIAPKTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVVQCIRCQVQ 230
T RPP +AP P TR P R KP++K P+ST S + + +
Sbjct: 262 TPRPPPSAPSRPPTTRKPSAQRIKPSNK------CPISTKSQKLGGAKVLLEIILATKQH 315
Query: 229 VFEAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRTQYGHLQSESRPP 80
+ L +L +L H+ D S ++V +T + E RPP
Sbjct: 316 ALSVLKNLNYLELELLSHSTDDDVSENHVKEKEPTTKTSERIEKPEPRPP 365
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 37.1 bits (82), Expect = 0.44
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +3
Query: 327 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 434
LD+G+ + G +++ +KGA+D GL +PH+ P
Sbjct: 103 LDIGVQPSIKGTKIYAVLKGALDAGLYIPHNDSILP 138
>UniRef50_A5DIV0 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 584
Score = 36.3 bits (80), Expect = 0.77
Identities = 20/72 (27%), Positives = 39/72 (54%)
Frame = +2
Query: 512 MRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKR 691
M+++EQ++ K++ + +L + +E KK E R + ++E KK+ KQ+R
Sbjct: 90 MKAIEQEEARMRKQEEKRMKELQKEREKLEREQKKEEERRRKEQEKLEREQKKEREKQER 149
Query: 692 WNKRQLTLAERK 727
KR+L E++
Sbjct: 150 EMKRELERKEKE 161
>UniRef50_Q7RWY4 Cluster: Putative uncharacterized protein
NCU08779.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU08779.1 - Neurospora crassa
Length = 864
Score = 34.3 bits (75), Expect = 3.1
Identities = 20/39 (51%), Positives = 22/39 (56%)
Frame = -3
Query: 388 APFIAPKTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSS 272
AP AP T AP AKP+S LN PG +TGS SS
Sbjct: 646 APAPAPSTAAPATTSAKPSS---LNIPGVSTTGSIASSS 681
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 33.9 bits (74), Expect = 4.1
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 40 RLIVRLSNKDVTCQVA-YSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 198
R IVR++ K V QVA YS I GD I+ L +YGV + N Y G
Sbjct: 29 RFIVRITGKGVIAQVAEYSDI-GDRILFTVTDKTLAKYGVDLRGNNIQVCYLVG 81
Score = 33.9 bits (74), Expect = 4.1
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +3
Query: 309 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 434
G LD G + G R+ +KG D G+ VPH FP
Sbjct: 92 GVESAVLDTGRRKFRKGGRIAACLKGFTDAGIEVPHGEDVFP 133
>UniRef50_Q4SUL3 Cluster: Chromosome 4 SCAF13876, whole genome shotgun
sequence; n=6; Tetraodontidae|Rep: Chromosome 4
SCAF13876, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1009
Score = 33.5 bits (73), Expect = 5.5
Identities = 13/56 (23%), Positives = 32/56 (57%)
Frame = +2
Query: 521 LEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQK 688
LE+DD++ +RQ S + + A + ++ E +A+ H++++ +++ KQ+
Sbjct: 934 LEEDDKEKCRRQLSAAYQADLRAQMEQQKQRRCEERAQAETEHRRRQAEEELYKQR 989
>UniRef50_Q4A574 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 955
Score = 33.5 bits (73), Expect = 5.5
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 5/120 (4%)
Frame = -3
Query: 412 GTLRPPSTA---PFIAPKTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVVQCIR 242
G PST+ PF++P ++ A +S P P+S + +PV + V+ +R
Sbjct: 42 GPSAAPSTSLSPPFLSPSYSMDYIIEAMTSSSSTSPVPPPVSASRPV--APVVARVEGLR 99
Query: 241 CQVQVFEAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQR--TQYGHLQSESRPPGMLH 68
V V L Q L + H N+ T +NK+R T G+ E+RPP H
Sbjct: 100 A-VPVGHRRQHSSPGHLQQFQQELHARHHHANI-TRLNKKRRNTDTGY-DPEARPPKFKH 156
>UniRef50_Q54X29 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 514
Score = 33.1 bits (72), Expect = 7.2
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 10/71 (14%)
Frame = -2
Query: 542 NPHHPVQDFSCISNMQTKDVSPVYFSIELFGFCII----------ARESFDGMRNIEATV 393
N P+Q++ C S + D SP +FS LF ++ SFDG NI +
Sbjct: 420 NVTSPIQNYQCSSLASSIDSSPKFFS--LFSIDVLKSYTEKKRLKLNSSFDGTFNIGQSS 477
Query: 392 NSTLHSSKDTS 360
+++L+SS++TS
Sbjct: 478 STSLNSSRNTS 488
>UniRef50_Q4R8L0 Cluster: Testis cDNA clone: QtsA-12228, similar to
human SRY (sex determining region Y)-box 30
(SOX30),transcript variant 1,; n=3; Mammalia|Rep: Testis
cDNA clone: QtsA-12228, similar to human SRY (sex
determining region Y)-box 30 (SOX30),transcript variant
1, - Macaca fascicularis (Crab eating macaque)
(Cynomolgus monkey)
Length = 433
Score = 32.7 bits (71), Expect = 9.5
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -3
Query: 409 TLRPPSTAPFIAPKTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSP 269
T++PP ++P R+ + +A P H+ P PL +TL+ +P
Sbjct: 241 TIQPPKEYSSVSPCPRSAPIPQASPIPHPHVYQPPPLGHPATLFGTP 287
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 744,588,124
Number of Sequences: 1657284
Number of extensions: 15276427
Number of successful extensions: 44224
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 41681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44092
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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