Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10451
(339 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79; Eukary... 106 8e-23
UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88; ... 104 4e-22
UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genom... 103 1e-21
UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44; Fungi... 103 1e-21
UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=... 70 9e-12
UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiell... 67 8e-11
UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba h... 63 1e-09
UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1; ... 52 3e-06
UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1; ... 51 4e-06
UniRef50_A0RZ36 Cluster: Ribosomal protein L44E; n=1; Cenarchaeu... 44 5e-04
UniRef50_Q9YF00 Cluster: 50S ribosomal protein L44E; n=15; Therm... 44 5e-04
UniRef50_Q9HIX1 Cluster: 50S ribosomal protein L44E; n=5; Archae... 40 0.014
UniRef50_Q3AV77 Cluster: Possible peptidase S26 family protein; ... 35 0.31
UniRef50_Q4T3I8 Cluster: Chromosome undetermined SCAF10033, whol... 33 1.7
UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1; ... 33 1.7
UniRef50_Q0IMZ5 Cluster: Os12g0524600 protein; n=20; Oryza sativ... 31 3.8
UniRef50_Q01W43 Cluster: Peptidase M50; n=1; Solibacter usitatus... 31 5.1
UniRef50_Q620M3 Cluster: Putative uncharacterized protein CBG027... 31 5.1
UniRef50_UPI00006CF34E Cluster: hypothetical protein TTHERM_0006... 31 6.7
UniRef50_A0VI92 Cluster: Inner-membrane translocator precursor; ... 31 6.7
UniRef50_Q6XLV7 Cluster: FirrV-1-E5; n=1; Feldmannia irregularis... 30 8.8
UniRef50_A7PG44 Cluster: Chromosome chr6 scaffold_15, whole geno... 30 8.8
UniRef50_A6RQI4 Cluster: Putative uncharacterized protein; n=1; ... 30 8.8
>UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79;
Eukaryota|Rep: 60S ribosomal protein L44 -
Caenorhabditis elegans
Length = 105
Score = 106 bits (255), Expect = 8e-23
Identities = 47/75 (62%), Positives = 55/75 (73%)
Frame = +1
Query: 34 SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVAL 213
+QYKK KE AQGRRRYDRKQ G+GGQ+KPIF IVLR+EC +CK + Q+ +
Sbjct: 25 TQYKKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKKAKTTKKIVLRMECTECKHKKQLPI 84
Query: 214 KRCKHFELGGDKKRR 258
KRCKHFELGG KK R
Sbjct: 85 KRCKHFELGGQKKSR 99
>UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88;
Eukaryota|Rep: 60S ribosomal protein L36a-like - Homo
sapiens (Human)
Length = 106
Score = 104 bits (249), Expect = 4e-22
Identities = 48/77 (62%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
Frame = +1
Query: 34 SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQV 207
+QYKK K+ AQGRRRYDRKQ GYGGQ+KPIF IVLRLEC + C+ + +
Sbjct: 24 TQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRML 83
Query: 208 ALKRCKHFELGGDKKRR 258
A+KRCKHFELGGDKKR+
Sbjct: 84 AIKRCKHFELGGDKKRK 100
>UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genome
shotgun sequence; n=9; Eukaryota|Rep: Chromosome chr1
scaffold_5, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 151
Score = 103 bits (246), Expect = 1e-21
Identities = 46/73 (63%), Positives = 54/73 (73%)
Frame = +1
Query: 34 SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVAL 213
+QYKK K+ AAQG+RRYDRKQ GYGGQ+KP+F IVLRL+C CK SQ +
Sbjct: 72 TQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPI 131
Query: 214 KRCKHFELGGDKK 252
KRCKHFE+GGDKK
Sbjct: 132 KRCKHFEIGGDKK 144
>UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36a -
Homo sapiens (Human)
Length = 106
Score = 103 bits (246), Expect = 1e-21
Identities = 47/77 (61%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
Frame = +1
Query: 34 SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQV 207
+QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF IVLRLEC + C+ + +
Sbjct: 24 TQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRML 83
Query: 208 ALKRCKHFELGGDKKRR 258
A+KRCKHFELGGDKKR+
Sbjct: 84 AIKRCKHFELGGDKKRK 100
>UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=1;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L44,
putative - Trichomonas vaginalis G3
Length = 104
Score = 70.1 bits (164), Expect = 9e-12
Identities = 33/75 (44%), Positives = 44/75 (58%)
Frame = +1
Query: 34 SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVAL 213
SQ + +ERH+A GRRRYDRKQ+G+GG+ KPI I LR C CK + L
Sbjct: 24 SQASRGEERHSALGRRRYDRKQKGFGGRVKPILRRSKKTSKKISLRFTCQSCKKATMYCL 83
Query: 214 KRCKHFELGGDKKRR 258
R + FE +KK++
Sbjct: 84 GRLRKFEWTVEKKKK 98
>UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiella
natans|Rep: Ribosomal protein L44 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 99
Score = 66.9 bits (156), Expect = 8e-11
Identities = 31/67 (46%), Positives = 40/67 (59%)
Frame = +1
Query: 37 QYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALK 216
+YK K AQG+RRYDRKQQGYGGQ+KP+F ++L C CK +LK
Sbjct: 25 EYKPGKASLNAQGKRRYDRKQQGYGGQTKPVFRKQVKNTKKPSIKLSCEICKKEFIKSLK 84
Query: 217 RCKHFEL 237
R K F++
Sbjct: 85 RTKRFQI 91
>UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba
histolytica|Rep: Ribosomal protein L44 - Entamoeba
histolytica
Length = 80
Score = 63.3 bits (147), Expect = 1e-09
Identities = 27/62 (43%), Positives = 37/62 (59%)
Frame = +1
Query: 37 QYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALK 216
QYKK K+ QG+RRYDRKQQG+GGQ+KP+F + ++EC CK+ +
Sbjct: 9 QYKKGKDSLHVQGKRRYDRKQQGFGGQTKPVFKKKAKQQRRL-FKIECTKCKIAQSLRES 67
Query: 217 RC 222
C
Sbjct: 68 TC 69
>UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 147
Score = 51.6 bits (118), Expect = 3e-06
Identities = 36/82 (43%), Positives = 44/82 (53%)
Frame = +2
Query: 14 ATKYTRYHSTKSPRKGTLPRVEDVMIVNSRVTVVSPNPSSKRRQKPLRKLCSVLSVPIAR 193
+T TR ST+ R P+ D ++ VTVV P+ SS RR +P R+L SV S AR
Sbjct: 24 STPPTRLPSTRRARTLFPPKESDDTTESNPVTVVRPSLSSTRRLRPPRRLSSVSSALSAR 83
Query: 194 *DHRLH*RDASTLSSVVTRREG 259
DAST SSVVTR G
Sbjct: 84 PSTNSPSSDASTSSSVVTRSRG 105
>UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 89
Score = 51.2 bits (117), Expect = 4e-06
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +1
Query: 160 IVLRLECADCKVRSQVALKRCKHFELGGDKK 252
IVL+L+C CK SQ +KRCKHFE+GGDKK
Sbjct: 52 IVLKLQCQSCKHYSQHPIKRCKHFEIGGDKK 82
>UniRef50_A0RZ36 Cluster: Ribosomal protein L44E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L44E - Cenarchaeum
symbiosum
Length = 93
Score = 44.4 bits (100), Expect = 5e-04
Identities = 24/67 (35%), Positives = 30/67 (44%)
Frame = +1
Query: 34 SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVAL 213
S YK K R +A G RR+ ++GYGGQ P + L C DCK +
Sbjct: 23 SIYKAGKRRASAIGERRHAEDKKGYGGQKFPKLAKPAKVTKKVTRLLTCPDCKKKFNTYG 82
Query: 214 KRCKHFE 234
R K FE
Sbjct: 83 LRVKKFE 89
>UniRef50_Q9YF00 Cluster: 50S ribosomal protein L44E; n=15;
Thermoprotei|Rep: 50S ribosomal protein L44E - Aeropyrum
pernix
Length = 95
Score = 44.4 bits (100), Expect = 5e-04
Identities = 25/68 (36%), Positives = 31/68 (45%)
Frame = +1
Query: 34 SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVAL 213
+QY+ K R A G RRY RKQ+GYG Q +P VL + C C +
Sbjct: 23 AQYRAGKRRAMALGERRYRRKQEGYGSQRRPEQKRFAKVTKKQVLVITCTVCGRKRPFLG 82
Query: 214 KRCKHFEL 237
R K EL
Sbjct: 83 IRLKRLEL 90
>UniRef50_Q9HIX1 Cluster: 50S ribosomal protein L44E; n=5;
Archaea|Rep: 50S ribosomal protein L44E - Thermoplasma
acidophilum
Length = 93
Score = 39.5 bits (88), Expect = 0.014
Identities = 22/65 (33%), Positives = 28/65 (43%)
Frame = +1
Query: 43 KKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRC 222
+K K G+RR+ R GYGG +P F I LRL C +C R
Sbjct: 26 RKRKASELKAGQRRFRRVTSGYGGFPRPKFEGREKPTKRIALRLVCDECHKAITPPGIRA 85
Query: 223 KHFEL 237
K FE+
Sbjct: 86 KKFEI 90
>UniRef50_Q3AV77 Cluster: Possible peptidase S26 family protein;
n=2; Synechococcus|Rep: Possible peptidase S26 family
protein - Synechococcus sp. (strain CC9902)
Length = 127
Score = 35.1 bits (77), Expect = 0.31
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +2
Query: 38 STKSPRKGTLPRVEDVMIVNSRVTVVSPNPSSKRRQKPLRKL 163
ST S + G +PR + +V SRVT NPS+K QK +L
Sbjct: 80 STDSRQLGPIPRSALIGVVTSRVTPAKKNPSTKTNQKSQNQL 121
>UniRef50_Q4T3I8 Cluster: Chromosome undetermined SCAF10033, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF10033,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 1494
Score = 32.7 bits (71), Expect = 1.7
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = -3
Query: 175 QDGAQFS*WFLPSF*RWVWTDHRNPAVYDHNVFYPGQRAFPWTFCTVIPCVL 20
++G F P W+W D+ N + D N+F F W C+ IP L
Sbjct: 49 ENGKDFRFDVSPDLLEWIWHDN-NQFLQDKNIFEHTYFGFMWQLCSSIPSSL 99
>UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 76
Score = 32.7 bits (71), Expect = 1.7
Identities = 11/15 (73%), Positives = 15/15 (100%)
Frame = +1
Query: 208 ALKRCKHFELGGDKK 252
+++RCKHFE+GGDKK
Sbjct: 55 SVQRCKHFEIGGDKK 69
>UniRef50_Q0IMZ5 Cluster: Os12g0524600 protein; n=20; Oryza sativa
(japonica cultivar-group)|Rep: Os12g0524600 protein -
Oryza sativa subsp. japonica (Rice)
Length = 1425
Score = 31.5 bits (68), Expect = 3.8
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 47 SPRKGTLPRVEDVMIVNSRVTVVSPNPSSKRRQKPL--RKLCSVLSVP 184
SPR PR+ +VN R VSP+ +RR +PL R C+ LS P
Sbjct: 868 SPRHRLRPRLR---VVNPRAGRVSPSSKDRRRSRPLAVRLRCARLSPP 912
>UniRef50_Q01W43 Cluster: Peptidase M50; n=1; Solibacter usitatus
Ellin6076|Rep: Peptidase M50 - Solibacter usitatus
(strain Ellin6076)
Length = 321
Score = 31.1 bits (67), Expect = 5.1
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -3
Query: 124 VWTDHRNPAVYDHNVFYPGQRAFPW 50
+W R+P++YD + PG+R W
Sbjct: 277 LWLGRRHPSIYDSTILSPGRRKLGW 301
>UniRef50_Q620M3 Cluster: Putative uncharacterized protein CBG02733;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG02733 - Caenorhabditis
briggsae
Length = 1157
Score = 31.1 bits (67), Expect = 5.1
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = +2
Query: 17 TKYTRY--HSTKSPRKGTLPRVEDVMIVNSRVTVVSP---NPSSKRRQKPLRKLCSVL 175
T+YTR +T + KG +PR ED +++ + V+SP + S+ R L KL L
Sbjct: 212 TQYTRTTKKTTYTISKGVIPRYEDPVVLRKQTRVMSPHYFSTSNLHRNDELPKLSETL 269
>UniRef50_UPI00006CF34E Cluster: hypothetical protein
TTHERM_00069490; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00069490 - Tetrahymena
thermophila SB210
Length = 1107
Score = 30.7 bits (66), Expect = 6.7
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +1
Query: 172 LECADCKVRSQVAL-KRCKHFELGG 243
LEC +CK+ Q AL +C +F+L G
Sbjct: 526 LECLECKINKQQALSSQCNYFDLNG 550
>UniRef50_A0VI92 Cluster: Inner-membrane translocator precursor;
n=1; Delftia acidovorans SPH-1|Rep: Inner-membrane
translocator precursor - Delftia acidovorans SPH-1
Length = 344
Score = 30.7 bits (66), Expect = 6.7
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = -1
Query: 291 LLEAFKIGSSVPSLLVTTELKVLAS 217
L++A ++G SVP+ LV TEL VLA+
Sbjct: 236 LVQAHRVGESVPNALVGTELFVLAA 260
>UniRef50_Q6XLV7 Cluster: FirrV-1-E5; n=1; Feldmannia irregularis
virus a|Rep: FirrV-1-E5 - Feldmannia irregularis virus a
Length = 128
Score = 30.3 bits (65), Expect = 8.8
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 26 TRYHSTKSPRKGTLPRVEDVMIVNSRVTVVSPNPSSKRR 142
TR +TKS R +P + +M R+ +++ PS+K+R
Sbjct: 4 TRSMATKSRRTAPMPTYDQLMAHAKRIALITKPPSAKKR 42
>UniRef50_A7PG44 Cluster: Chromosome chr6 scaffold_15, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr6 scaffold_15, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1096
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -1
Query: 300 WSYLLEAFKIGSSVPSLLVTTELKVLASLQCNL*SHLAIGTLKTEHNFL 154
W L FK+G+ +++VTT + +A L L SH +G L +E +L
Sbjct: 256 WDVLQVPFKVGAQGSAIIVTTRNEEVAYLMSTLPSH-HLGELSSEECWL 303
>UniRef50_A6RQI4 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 226
Score = 30.3 bits (65), Expect = 8.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 47 SPRKGTLPRVEDVMIVNSRVTVVSPNPSSKR 139
S ++ LP ED+ I N V V+ P P +KR
Sbjct: 88 SAKEPLLPGDEDIQIDNGNVEVIDPQPKTKR 118
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 285,452,604
Number of Sequences: 1657284
Number of extensions: 4986763
Number of successful extensions: 12634
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 12386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12627
length of database: 575,637,011
effective HSP length: 88
effective length of database: 429,796,019
effective search space used: 10315104456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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