Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10430
(707 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7QDG3 Cluster: ENSANGP00000014233; n=2; Culicidae|Rep:... 110 4e-23
UniRef50_Q9XZ06 Cluster: CG11092-PA; n=2; Sophophora|Rep: CG1109... 88 2e-16
UniRef50_Q8N1F7 Cluster: Nuclear pore complex protein Nup93; n=4... 84 3e-15
UniRef50_UPI00003C0670 Cluster: PREDICTED: similar to nucleopori... 82 1e-14
UniRef50_Q9VFE7 Cluster: CG7262-PA; n=2; Sophophora|Rep: CG7262-... 81 2e-14
UniRef50_Q5C809 Cluster: SJCHGC05220 protein; n=1; Schistosoma j... 64 2e-09
UniRef50_Q9BKT9 Cluster: Nuclear pore complex protein protein 13... 44 0.004
UniRef50_Q5KK42 Cluster: Nucleoporin-interacting protein NIC96, ... 42 0.015
UniRef50_Q4P7V0 Cluster: Putative uncharacterized protein; n=1; ... 42 0.015
UniRef50_Q6FUM4 Cluster: Similar to sp|P34077 Saccharomyces cere... 41 0.026
UniRef50_A5DNW8 Cluster: Putative uncharacterized protein; n=1; ... 39 0.14
UniRef50_A3LN15 Cluster: Predicted protein; n=5; Saccharomycetal... 38 0.18
UniRef50_Q95QK3 Cluster: Temporarily assigned gene name protein ... 37 0.56
UniRef50_Q6FKS2 Cluster: Similar to sp|P34077 Saccharomyces cere... 36 0.98
UniRef50_Q18Z14 Cluster: PEP-utilising enzyme, mobile region; n=... 35 2.3
UniRef50_Q6ZGT8 Cluster: Putative uncharacterized protein OJ1118... 33 5.2
UniRef50_A2QY64 Cluster: Contig An12c0010, complete genome. prec... 33 5.2
UniRef50_Q7QS00 Cluster: GLP_228_26673_25900; n=1; Giardia lambl... 33 6.9
>UniRef50_Q7QDG3 Cluster: ENSANGP00000014233; n=2; Culicidae|Rep:
ENSANGP00000014233 - Anopheles gambiae str. PEST
Length = 819
Score = 110 bits (264), Expect = 4e-23
Identities = 48/91 (52%), Positives = 66/91 (72%)
Frame = +3
Query: 234 LSETVAAYVRKFELTDPSDALHYYYFLRNLKDPSGKNLFMCCCTDLALESRDYELLFGRI 413
++ + YV+KFE+TDP +ALHY+YFLRNLKD G+NLF+ DLA+E RD++LLFGR+
Sbjct: 523 IARLIMLYVKKFEITDPPEALHYFYFLRNLKDSEGRNLFLVSVADLAIECRDFDLLFGRM 582
Query: 414 DANSSLRSPGLVDQFNNPHIDSKVIALNVAE 506
+RS GL+DQF HID++ + VAE
Sbjct: 583 Q-RDGMRSRGLIDQFETVHIDARTVCEMVAE 612
Score = 100 bits (239), Expect = 4e-20
Identities = 44/70 (62%), Positives = 58/70 (82%)
Frame = +1
Query: 1 ETHYHAYEKPVVYFQVLALTGQFEPAIEFLSRIPRYQVHGVHMALALHDVYMLGTPRNVQ 180
E HY+A E+P +YFQ+LALTGQ+E IEFLSR +Y+VH VH+ LAL++++M+G PRN+Q
Sbjct: 445 EKHYNANEQPHLYFQLLALTGQYEAGIEFLSRFEKYRVHAVHIGLALNELHMIGGPRNLQ 504
Query: 181 APLLSVDTED 210
PLLSVD ED
Sbjct: 505 EPLLSVDFED 514
Score = 47.2 bits (107), Expect = 4e-04
Identities = 23/64 (35%), Positives = 36/64 (56%)
Frame = +2
Query: 512 VNKGLFEDAITMYDIADNLEKVVELSCILLAQVVNSGGGETGVRGRLAKRCELTDAKLRG 691
V KG+FEDAI M+D+A E+ + + ILL+QVV+ E +R R+ + + G
Sbjct: 615 VKKGMFEDAIKMFDLASQQEQALRYTSILLSQVVHHANKEGSLRERVQRMAHEFTERYTG 674
Query: 692 FHRN 703
+N
Sbjct: 675 AEKN 678
>UniRef50_Q9XZ06 Cluster: CG11092-PA; n=2; Sophophora|Rep:
CG11092-PA - Drosophila melanogaster (Fruit fly)
Length = 823
Score = 88.2 bits (209), Expect = 2e-16
Identities = 39/70 (55%), Positives = 54/70 (77%)
Frame = +1
Query: 1 ETHYHAYEKPVVYFQVLALTGQFEPAIEFLSRIPRYQVHGVHMALALHDVYMLGTPRNVQ 180
E +++A EK +YFQVL LTGQFE AIEFL+R + + H +HMA+AL+++ MLGTPR+V+
Sbjct: 442 ENYFNAREKAALYFQVLTLTGQFEAAIEFLARTEKNRTHAIHMAIALNEISMLGTPRSVE 501
Query: 181 APLLSVDTED 210
LLS D +D
Sbjct: 502 QSLLSSDPDD 511
Score = 62.9 bits (146), Expect = 7e-09
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Frame = +3
Query: 234 LSETVAAYVRKFELTDPSDALHYYYFLRNLKDPSGK-NLFMCCCTDLALESRD---YELL 401
L + Y + FE TD + ALHYYY LRN K +G+ N+ + C DL +E D EL+
Sbjct: 520 LVRLIVMYTKCFERTDTTQALHYYYLLRNFKSENGRGNVMLTCVCDLLVEKCDDEMLELI 579
Query: 402 FGRIDANSSLRSPGLVDQFNNPHIDSKVIALNVAE 506
FG D + LR G+ +F D +A V +
Sbjct: 580 FGTEDKKNGLRYGGIYAEFQIHECDKYSLAEMVGD 614
Score = 34.7 bits (76), Expect = 2.3
Identities = 23/59 (38%), Positives = 29/59 (49%)
Frame = +2
Query: 509 LVNKGLFEDAITMYDIADNLEKVVELSCILLAQVVNSGGGETGVRGRLAKRCELTDAKL 685
L +G +E AI +Y I L+K + L LLAQVV+ VR RL DA L
Sbjct: 616 LSKRGDYELAIELYFIGGQLDKALRLVNSLLAQVVHQPTQNGSVRNRLGDIINRLDAAL 674
>UniRef50_Q8N1F7 Cluster: Nuclear pore complex protein Nup93; n=44;
Eumetazoa|Rep: Nuclear pore complex protein Nup93 - Homo
sapiens (Human)
Length = 819
Score = 84.2 bits (199), Expect = 3e-15
Identities = 37/83 (44%), Positives = 59/83 (71%)
Frame = +3
Query: 255 YVRKFELTDPSDALHYYYFLRNLKDPSGKNLFMCCCTDLALESRDYELLFGRIDANSSLR 434
Y RKFE TDP +AL Y+YFLR+ KD G+N+F+ C ++L +ESR+++++ G+++ N R
Sbjct: 535 YTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKLE-NDGSR 593
Query: 435 SPGLVDQFNNPHIDSKVIALNVA 503
PG++D+F + D+K I VA
Sbjct: 594 KPGVIDKFTS---DTKPIINKVA 613
Score = 60.9 bits (141), Expect = 3e-08
Identities = 30/70 (42%), Positives = 43/70 (61%)
Frame = +1
Query: 1 ETHYHAYEKPVVYFQVLALTGQFEPAIEFLSRIPRYQVHGVHMALALHDVYMLGTPRNVQ 180
E+H+ ++P +YFQVL LT QFE A+ FL R+ R + H VH+AL L ++ +L
Sbjct: 450 ESHFTVNQQPFLYFQVLFLTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQS 509
Query: 181 APLLSVDTED 210
A LLS + D
Sbjct: 510 AQLLSHEPGD 519
Score = 40.7 bits (91), Expect = 0.034
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +2
Query: 515 NKGLFEDAITMYDIADNLEKVVELSCILLAQVV 613
NKGLFE+A +YD+A N +KV+EL LL+ VV
Sbjct: 618 NKGLFEEAAKLYDLAKNADKVLELMNKLLSPVV 650
>UniRef50_UPI00003C0670 Cluster: PREDICTED: similar to nucleoporin
93; n=2; Apocrita|Rep: PREDICTED: similar to nucleoporin
93 - Apis mellifera
Length = 824
Score = 82.2 bits (194), Expect = 1e-14
Identities = 40/72 (55%), Positives = 53/72 (73%), Gaps = 2/72 (2%)
Frame = +1
Query: 1 ETHYHAYEKPVVYFQVLALTGQFEPAIEFLSR--IPRYQVHGVHMALALHDVYMLGTPRN 174
E++YHA+E+P VYF +L LTGQFE AIEFL+R R+ H VH+A A+H+ +LG ++
Sbjct: 456 ESYYHAHEQPFVYFSMLFLTGQFEAAIEFLARGAGARHLPHAVHLAAAMHEQNLLGVSQS 515
Query: 175 VQAPLLSVDTED 210
V APLLSVD D
Sbjct: 516 VLAPLLSVDPAD 527
Score = 56.8 bits (131), Expect = 5e-07
Identities = 30/66 (45%), Positives = 40/66 (60%)
Frame = +2
Query: 509 LVNKGLFEDAITMYDIADNLEKVVELSCILLAQVVNSGGGETGVRGRLAKRCELTDAKLR 688
L KGL EDA+ MYD+A N EKV+ L C LLAQVVN R RL ++T ++
Sbjct: 625 LYRKGLLEDAVIMYDLAGNHEKVLSLMCTLLAQVVNQRASPGSFRSRL----QVTATEIS 680
Query: 689 GFHRNL 706
G ++N+
Sbjct: 681 GRYQNI 686
Score = 51.6 bits (118), Expect = 2e-05
Identities = 22/73 (30%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Frame = +3
Query: 246 VAAYVRKFELTDPSDALHYYYFLRNLKDPSGKNLFMCCCTDLALESRD--YELLFGRIDA 419
+ YV++F+ TDP + LHY + LR+++DP +N+F ++ +++ L G+I+
Sbjct: 540 ILLYVKRFDSTDPEECLHYLFLLRSMRDPYDRNMFAVSTAEMVVDASPTVRAQLVGKIEK 599
Query: 420 NSSLRSPGLVDQF 458
+ + PG++D+F
Sbjct: 600 DRWI--PGILDRF 610
>UniRef50_Q9VFE7 Cluster: CG7262-PA; n=2; Sophophora|Rep: CG7262-PA
- Drosophila melanogaster (Fruit fly)
Length = 796
Score = 81.4 bits (192), Expect = 2e-14
Identities = 36/70 (51%), Positives = 53/70 (75%)
Frame = +1
Query: 1 ETHYHAYEKPVVYFQVLALTGQFEPAIEFLSRIPRYQVHGVHMALALHDVYMLGTPRNVQ 180
E +++A ++P +YF+ LALTGQFE AIEFL+R + H VHMA+AL ++ +LG+ R+V
Sbjct: 423 EKYFNARQQPYLYFETLALTGQFEAAIEFLARQDENRAHAVHMAIALFELGLLGSARSVS 482
Query: 181 APLLSVDTED 210
PLLS+D +D
Sbjct: 483 QPLLSIDIKD 492
Score = 75.8 bits (178), Expect = 1e-12
Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 6/97 (6%)
Frame = +3
Query: 234 LSETVAAYVRKFELTDPSDALHYYYFLRNLKDPSGKNLFMCCCTDLALES-----RDYEL 398
L+ + YV++FE TD S+ALHYYY LR LKD G+N+FM C DL ++S ++L
Sbjct: 501 LTRLIRQYVQRFERTDTSEALHYYYTLRCLKDSKGRNMFMACVCDLVVDSGVFDTTIFDL 560
Query: 399 LFG-RIDANSSLRSPGLVDQFNNPHIDSKVIALNVAE 506
+FG R ++ + + GL QF P D++ +A V +
Sbjct: 561 IFGKRQSSDQNDVNSGLFRQFECPEFDTRTMAAQVGD 597
>UniRef50_Q5C809 Cluster: SJCHGC05220 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05220 protein - Schistosoma
japonicum (Blood fluke)
Length = 276
Score = 64.5 bits (150), Expect = 2e-09
Identities = 27/64 (42%), Positives = 45/64 (70%)
Frame = +1
Query: 1 ETHYHAYEKPVVYFQVLALTGQFEPAIEFLSRIPRYQVHGVHMALALHDVYMLGTPRNVQ 180
E H+ A+ +P+V+F++L LT Q+E AI FL+R + + H VH+AL L D+++L P +
Sbjct: 209 EVHFDAWSQPLVFFKILCLTQQYEAAIGFLARFEQLRCHAVHIALVLKDLHLLLLPNWLH 268
Query: 181 APLL 192
+PL+
Sbjct: 269 SPLV 272
>UniRef50_Q9BKT9 Cluster: Nuclear pore complex protein protein 13,
isoform a; n=3; Caenorhabditis|Rep: Nuclear pore complex
protein protein 13, isoform a - Caenorhabditis elegans
Length = 787
Score = 44.0 bits (99), Expect = 0.004
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +3
Query: 204 RRSTTVASFELSETVAAYVRKFELTDPSDALHYYYFLRNLKDPSGKNLF-MCCCTDLALE 380
+ +T L+ + AY + FEL D +L Y++ L+ + P+G ++F M + L
Sbjct: 490 QNDSTKCHLNLARLIVAYTKSFELVDVPRSLDYWFLLKGITTPTGSDVFEMAVSRSVYLT 549
Query: 381 SRDYELLFGRIDANSSLRSPGLVDQF 458
+ E+L G++ + R GL+D++
Sbjct: 550 GQTDEIL-GKLTPDGR-REKGLIDEY 573
>UniRef50_Q5KK42 Cluster: Nucleoporin-interacting protein NIC96,
putative; n=2; Filobasidiella neoformans|Rep:
Nucleoporin-interacting protein NIC96, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 911
Score = 41.9 bits (94), Expect = 0.015
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +1
Query: 25 KPVVYFQVLALTGQFEPAIEFLSRIPRYQVHGVHMALALHDVYMLGTP-RNVQAPLLSV 198
KP+ +F +L T QFE A+ +L P+ + VH A+AL +L P + +A LL+V
Sbjct: 521 KPLAWFNLLLFTAQFEKAVAYLYSKPQMKTDAVHFAIALSYYGLLRVPTKGDEAELLAV 579
>UniRef50_Q4P7V0 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 917
Score = 41.9 bits (94), Expect = 0.015
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +1
Query: 25 KPVVYFQVLALTGQFEPAIEFLSRIPRYQVHGVHMALALHDVYMLGTP 168
+P+ YF++L L GQFE A+ FL +QV +H A+AL +L P
Sbjct: 524 RPLFYFRLLLLCGQFEKAVGFLFSRSAHQVDAIHFAVALAYYGLLRVP 571
Score = 35.9 bits (79), Expect = 0.98
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Frame = +3
Query: 216 TVASFELSETVAAYVRKFELTDPSDALHYYYFL---RNLKDPSGKNLFMCC---CTDLAL 377
++AS + ++ V YVR F DAL Y Y + ++ +P G C L L
Sbjct: 592 SIASVDFAKLVQRYVRMFSQASRRDALQYLYLICLHADVGEPVGSEQVRRCHDLIRALVL 651
Query: 378 ESR--DYELLFGRIDANSSLRSPGLVDQFNNPHIDSK 482
E+ +++ L G + N + ++PGL+++ N P I K
Sbjct: 652 EAHPTEFQELLGDVRTNGA-KTPGLIER-NLPLIKIK 686
>UniRef50_Q6FUM4 Cluster: Similar to sp|P34077 Saccharomyces
cerevisiae YFR002w NIC96 nuclear pore protein; n=1;
Candida glabrata|Rep: Similar to sp|P34077 Saccharomyces
cerevisiae YFR002w NIC96 nuclear pore protein - Candida
glabrata (Yeast) (Torulopsis glabrata)
Length = 840
Score = 41.1 bits (92), Expect = 0.026
Identities = 23/84 (27%), Positives = 45/84 (53%)
Frame = +3
Query: 228 FELSETVAAYVRKFELTDPSDALHYYYFLRNLKDPSGKNLFMCCCTDLALESRDYELLFG 407
F S +A Y+ +F+ +DP A Y +++ S L +L L++R+Y LL G
Sbjct: 539 FNTSRMLADYIDQFKFSDPRVAAQYIIHMKSPDSVSSIELCKSFLENLVLDTREYALLLG 598
Query: 408 RIDANSSLRSPGLVDQFNNPHIDS 479
+++ + S + GL+++ P +D+
Sbjct: 599 KVNEDGS-KLCGLIEKL-YPLVDN 620
>UniRef50_A5DNW8 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 972
Score = 38.7 bits (86), Expect = 0.14
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = +3
Query: 210 STTVASFELSETVAAYVRKFELTDPSDALHYYYFLRNLKD--PSGKNLFMC--CCTDLAL 377
S + S + +Y R F+++DP A Y L + D S + L C +L L
Sbjct: 637 SNGLPEINFSRLLGSYTRSFKISDPKVACQ-YLILIGMGDGGNSHEELSKCHEALRELIL 695
Query: 378 ESRDYELLFGRIDANSSLRSPGLVDQ 455
SR++ +L G +D + + PGL+++
Sbjct: 696 ISREFNMLLGELDQTTGQKVPGLLER 721
>UniRef50_A3LN15 Cluster: Predicted protein; n=5;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 984
Score = 38.3 bits (85), Expect = 0.18
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +3
Query: 237 SETVAAYVRKFELTDPSDALHYYYFLRNLKDPSGKNLFMCC---CTDLALESRDYELLFG 407
S + +Y R F+++DP A Y + K + K C +L L SR++ +L G
Sbjct: 654 SRLLGSYTRSFKISDPKVACQYLILIAMSKGGNSKEEIAKCHEALRELILISREFVMLLG 713
Query: 408 RIDANSSLRSPGLVDQ 455
I+ + + PG++++
Sbjct: 714 DINQQNGTKIPGVLER 729
>UniRef50_Q95QK3 Cluster: Temporarily assigned gene name protein
279, isoform b; n=2; Caenorhabditis elegans|Rep:
Temporarily assigned gene name protein 279, isoform b -
Caenorhabditis elegans
Length = 1061
Score = 36.7 bits (81), Expect = 0.56
Identities = 25/91 (27%), Positives = 43/91 (47%)
Frame = -2
Query: 280 SVSSNFLT*AATVSLSSNDATVVDLLCPQTGVELEHSSVCPACKRHVTQEPYEHRVLDIL 101
S SS F + + + ++A VD CP+T +++ S P+C T+EP
Sbjct: 310 STSSEFTETTSVANQTESNAGSVDDYCPRTSIDIGLDSSAPSCSSDATREPTP------- 362
Query: 100 VFSRGIR*LAQIVQSEPTLESTRLAFHKHDN 8
+ RG + Q +EP + T+ A+ K+ N
Sbjct: 363 IKKRGRKKKEQSA-TEPPIPRTKRAYTKNPN 392
>UniRef50_Q6FKS2 Cluster: Similar to sp|P34077 Saccharomyces
cerevisiae YFR002w NIC96 nuclear pore protein; n=1;
Candida glabrata|Rep: Similar to sp|P34077 Saccharomyces
cerevisiae YFR002w NIC96 nuclear pore protein - Candida
glabrata (Yeast) (Torulopsis glabrata)
Length = 846
Score = 35.9 bits (79), Expect = 0.98
Identities = 17/74 (22%), Positives = 38/74 (51%)
Frame = +3
Query: 231 ELSETVAAYVRKFELTDPSDALHYYYFLRNLKDPSGKNLFMCCCTDLALESRDYELLFGR 410
+ ++ + Y + F+ +DP A Y + + +DP +L L LE+ ++ L G
Sbjct: 534 DFAKLLGNYTKSFKYSDPRIASEYLFLIAICEDPEVIDLCHEALRQLILETNEFTKLLGE 593
Query: 411 IDANSSLRSPGLVD 452
++ + + R PG+++
Sbjct: 594 VNKDGT-RVPGVIE 606
>UniRef50_Q18Z14 Cluster: PEP-utilising enzyme, mobile region; n=2;
Desulfitobacterium hafniense|Rep: PEP-utilising enzyme,
mobile region - Desulfitobacterium hafniense (strain
DCB-2)
Length = 560
Score = 34.7 bits (76), Expect = 2.3
Identities = 14/31 (45%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Frame = -3
Query: 93 REEFDSWLKLSSQSQHL-KVHDWLFISMIMC 4
REEF +WL+L+ Q Q L ++HD+L +++ +C
Sbjct: 312 REEFGTWLELAEQVQPLSEIHDYLLMTVPLC 342
>UniRef50_Q6ZGT8 Cluster: Putative uncharacterized protein
OJ1118_G04.20; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OJ1118_G04.20 - Oryza sativa subsp. japonica (Rice)
Length = 260
Score = 33.5 bits (73), Expect = 5.2
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = -3
Query: 687 RSFASVSSHRLASRPRTPVSPPPLFTTCASNMQDNSTTFSKLS-AISYMVIASSNKPLFT 511
RSFAS + PR PVSPPP F + + F +++ A V+AS++ P
Sbjct: 98 RSFASKPLASTGAPPRRPVSPPPYF-PYHGRLHRRTFAFDRVAPAAGRAVLASASMP--- 153
Query: 510 SAQQHSTQSP 481
SA H +P
Sbjct: 154 SASVHVAAAP 163
>UniRef50_A2QY64 Cluster: Contig An12c0010, complete genome.
precursor; n=1; Aspergillus niger|Rep: Contig An12c0010,
complete genome. precursor - Aspergillus niger
Length = 179
Score = 33.5 bits (73), Expect = 5.2
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = -3
Query: 690 PRSFASVSSHRLASRPRTPVSPPPLFTTCAS---NMQDNSTTFSKLSAISYMVIASSNKP 520
P S V+S LA P TPVSP PL T +S + +S F S+ S +ASS++
Sbjct: 32 PVSSTHVASSPLAPTP-TPVSPSPLHTASSSVIISSSSSSVRFHPSSSASPSHMASSSRR 90
Query: 519 LFTSA 505
+ +SA
Sbjct: 91 ISSSA 95
>UniRef50_Q7QS00 Cluster: GLP_228_26673_25900; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_228_26673_25900 - Giardia lamblia
ATCC 50803
Length = 257
Score = 33.1 bits (72), Expect = 6.9
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = -3
Query: 684 SFASVSSHRLASRPRTPVSPPPLFTTCASNMQDNSTTFSKLSAISYMVIASSNKPLFTS- 508
SF+S SSH+ RP++P S ++ +S+ +S++ S S+ S +SS+ +S
Sbjct: 86 SFSSSSSHQPTPRPQSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSR 145
Query: 507 AQQHSTQS 484
+ HS+ S
Sbjct: 146 SSSHSSSS 153
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,161,209
Number of Sequences: 1657284
Number of extensions: 12509260
Number of successful extensions: 38912
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 37351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38885
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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