Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10423
         (837 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P26232 Cluster: Catenin alpha-2; n=22; Eumetazoa|Rep: C...    35   2.9  
UniRef50_A5AXK1 Cluster: Putative uncharacterized protein; n=2; ...    34   3.8  
UniRef50_Q04UX1 Cluster: Penicillin binding protein/Beta-lactama...    33   6.7  
UniRef50_Q6PHN1 Cluster: Coiled-coil domain-containing protein 5...    33   6.7  
UniRef50_A0NGL7 Cluster: ENSANGP00000027189; n=2; Culicidae|Rep:...    33   8.9  

>UniRef50_P26232 Cluster: Catenin alpha-2; n=22; Eumetazoa|Rep:
           Catenin alpha-2 - Homo sapiens (Human)
          Length = 953

 Score = 34.7 bits (76), Expect = 2.9
 Identities = 14/24 (58%), Positives = 20/24 (83%)
 Frame = -2

Query: 836 EAKVRRGSQKKQPSPIHALAEFQS 765
           + +VRRGSQKK  SP+ AL+EF++
Sbjct: 926 QTRVRRGSQKKHISPVQALSEFKA 949


>UniRef50_A5AXK1 Cluster: Putative uncharacterized protein; n=2;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 362

 Score = 34.3 bits (75), Expect = 3.8
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +2

Query: 416 CMLCISGPVHVESTVHSSARTIRCSCQTSTINMS 517
           C   + GP+HV+ST+H S  +I CS   +T+ +S
Sbjct: 64  CQATLKGPLHVDSTLHXSRPSI-CSSDVATVGVS 96


>UniRef50_Q04UX1 Cluster: Penicillin binding protein/Beta-lactamase
           class C protein; n=2; Leptospira borgpetersenii serovar
           Hardjo-bovis|Rep: Penicillin binding
           protein/Beta-lactamase class C protein - Leptospira
           borgpetersenii serovar Hardjo-bovis (strain JB197)
          Length = 402

 Score = 33.5 bits (73), Expect = 6.7
 Identities = 19/60 (31%), Positives = 31/60 (51%)
 Frame = -1

Query: 258 HDVRKRWRNACSACSLSVSPSKKFTFACSVGSCDVTSVRERW*DAPDARSPSHSLSKKFT 79
           H +++  +N C     SV+ SK   ++ SVGS D+         A D++   HS++K FT
Sbjct: 51  HLLKRAGKNDCPGIQYSVTTSKGLIYSSSVGSADIEGNVPL---AKDSQMMLHSMTKTFT 107


>UniRef50_Q6PHN1 Cluster: Coiled-coil domain-containing protein 57;
           n=2; Mus musculus|Rep: Coiled-coil domain-containing
           protein 57 - Mus musculus (Mouse)
          Length = 1016

 Score = 33.5 bits (73), Expect = 6.7
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
 Frame = -1

Query: 834 GEGPPRQPEEATK--PDPRSGGVPEPADSV*VQKSIEINIENVLNK 703
           G  PP QPEE +   PDP++GG   P D V    ++E  ++N+ +K
Sbjct: 548 GHLPPAQPEECSNADPDPKAGGDSTPPDYV---LTLEAEMQNLKHK 590


>UniRef50_A0NGL7 Cluster: ENSANGP00000027189; n=2; Culicidae|Rep:
           ENSANGP00000027189 - Anopheles gambiae str. PEST
          Length = 422

 Score = 33.1 bits (72), Expect = 8.9
 Identities = 17/41 (41%), Positives = 20/41 (48%)
 Frame = -2

Query: 359 VTSRTCERDAEMRALSLSLSKKFTFRCSVGSCDVTTCERDG 237
           V S TCER  +   L+       TF C+ G   V TCE DG
Sbjct: 310 VPSSTCERQLQATRLTSRFRLHQTFICAGGERGVDTCEGDG 350


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 818,172,303
Number of Sequences: 1657284
Number of extensions: 16653494
Number of successful extensions: 46761
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 41656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46641
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72963732758
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)