BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30175 (663 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 90 4e-17 UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 89 7e-17 UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 89 9e-17 UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 83 4e-15 UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 81 2e-14 UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 81 2e-14 UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 81 3e-14 UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 80 4e-14 UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 79 7e-14 UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 78 2e-13 UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 78 2e-13 UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 77 4e-13 UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 77 4e-13 UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 76 7e-13 UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 74 3e-12 UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 73 6e-12 UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 73 6e-12 UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 73 6e-12 UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 71 2e-11 UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 71 2e-11 UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 71 2e-11 UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 71 2e-11 UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 71 2e-11 UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 71 3e-11 UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 70 4e-11 UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 69 1e-10 UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 69 1e-10 UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 66 9e-10 UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 66 9e-10 UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 66 9e-10 UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 66 9e-10 UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 65 2e-09 UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 65 2e-09 UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 64 2e-09 UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 64 2e-09 UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 62 9e-09 UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 58 2e-07 UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 56 6e-07 UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 56 1e-06 UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 55 1e-06 UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 55 2e-06 UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 55 2e-06 UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 54 2e-06 UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 50 5e-05 UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 50 7e-05 UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 49 9e-05 UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 49 1e-04 UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 49 1e-04 UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 49 1e-04 UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 46 6e-04 UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 46 8e-04 UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 45 0.002 UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 44 0.004 UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 43 0.006 UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 43 0.008 UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 43 0.008 UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 42 0.013 UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 42 0.018 UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 42 0.018 UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 41 0.023 UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 41 0.023 UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 41 0.031 UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 40 0.040 UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 40 0.040 UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 39 0.12 UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 38 0.28 UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 38 0.28 UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 37 0.38 UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 37 0.38 UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 37 0.50 UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 36 0.66 UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 36 0.87 UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 36 0.87 UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 36 1.1 UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 36 1.1 UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 36 1.1 UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 35 1.5 UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 35 2.0 UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 33 4.6 UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 33 8.1 UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 33 8.1 UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 33 8.1 UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 33 8.1 >UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; Bilateria|Rep: Cytochrome c oxidase subunit I - Samia cynthia ricini (Indian eri silkmoth) Length = 510 Score = 90.2 bits (214), Expect = 4e-17 Identities = 47/61 (77%), Positives = 50/61 (81%) Frame = +1 Query: 217 LTPTPLPYIINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAI 396 L P L +I+ IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISSI+GAI Sbjct: 101 LLPPSLTLLIS-SSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAI 159 Query: 397 N 399 N Sbjct: 160 N 160 Score = 88.2 bits (209), Expect = 2e-16 Identities = 44/68 (64%), Positives = 48/68 (70%) Frame = +2 Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193 LLIRAELG PGSLIGDDQIYNTIVTAHA N LVPL+LGAPD+AF Sbjct: 32 LLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAF 91 Query: 194 PRINNIRF 217 PR+NN+ F Sbjct: 92 PRMNNMSF 99 Score = 33.9 bits (74), Expect = 3.5 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = +2 Query: 590 FLDPAGGGDPHLYPHLIF 643 F DPAGGGDP LY HL + Sbjct: 216 FFDPAGGGDPILYQHLFW 233 >UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; Panarthropoda|Rep: Cytochrome c oxidase subunit I - Pagyris cymothoe Length = 487 Score = 89.4 bits (212), Expect = 7e-17 Identities = 47/61 (77%), Positives = 50/61 (81%) Frame = +1 Query: 217 LTPTPLPYIINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAI 396 L P L +I+ IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISSI+GAI Sbjct: 77 LLPPSLILLIS-SSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAI 135 Query: 397 N 399 N Sbjct: 136 N 136 Score = 86.2 bits (204), Expect = 6e-16 Identities = 42/68 (61%), Positives = 47/68 (69%) Frame = +2 Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193 LLIR ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AF Sbjct: 8 LLIRTELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAF 67 Query: 194 PRINNIRF 217 PR+NN+ F Sbjct: 68 PRMNNMSF 75 Score = 33.9 bits (74), Expect = 3.5 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = +2 Query: 590 FLDPAGGGDPHLYPHLIF 643 F DPAGGGDP LY HL + Sbjct: 192 FFDPAGGGDPILYQHLFW 209 >UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Periclimenes thermohydrophilus|Rep: Cytochrome oxidase subunit I - Periclimenes thermohydrophilus Length = 217 Score = 89.0 bits (211), Expect = 9e-17 Identities = 47/79 (59%), Positives = 56/79 (70%) Frame = -1 Query: 246 NNIREGGRSQNLILFIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I 67 + ++EGG +QNL+LFIRGNA+SGAP++ GTNQFPNPP KA AVT+ L I Sbjct: 123 SKVKEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-I 181 Query: 66 *SSPINDPGFPNSARIKSL 10 S PI PG PNSARIKSL Sbjct: 182 WSFPIKLPGCPNSARIKSL 200 Score = 65.7 bits (153), Expect = 9e-10 Identities = 32/47 (68%), Positives = 34/47 (72%) Frame = -2 Query: 392 APIIDEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILL 252 AP I+E PAKC+EKI STD P CAI SGG TVHPVP P STI L Sbjct: 74 APKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPL 120 Score = 38.3 bits (85), Expect = 0.16 Identities = 25/47 (53%), Positives = 31/47 (65%) Frame = -1 Query: 636 KCGYKWGSPPPAGSKKWGYLKVSDLVNNIVNSPQPKTGSDNNKKMAV 496 KC + GSPPPAGSKK + S V +IV +P TGS++N KMAV Sbjct: 2 KC-WSIGSPPPAGSKKEVFKFRS--VKSIVIAP-ASTGSESNSKMAV 44 >UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus rubiginosus Length = 504 Score = 83.4 bits (197), Expect = 4e-15 Identities = 40/68 (58%), Positives = 47/68 (69%) Frame = +2 Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193 LLIRAELG PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AF Sbjct: 36 LLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAF 95 Query: 194 PRINNIRF 217 PR+NN+ F Sbjct: 96 PRMNNMSF 103 Score = 80.2 bits (189), Expect = 4e-14 Identities = 38/46 (82%), Positives = 41/46 (89%) Frame = +1 Query: 262 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAGISSI+GAIN Sbjct: 119 VEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAIN 164 Score = 33.9 bits (74), Expect = 3.5 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = +2 Query: 590 FLDPAGGGDPHLYPHLIF 643 F DPAGGGDP LY HL + Sbjct: 220 FFDPAGGGDPILYQHLFW 237 >UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; Eukaryota|Rep: Cytochrome c oxidase subunit I - Ophisurus macrorhynchos Length = 546 Score = 81.0 bits (191), Expect = 2e-14 Identities = 39/68 (57%), Positives = 46/68 (67%) Frame = +2 Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193 LLIRAEL PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AF Sbjct: 35 LLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMIGGFGNWLVPLMIGAPDMAF 94 Query: 194 PRINNIRF 217 PR+NN+ F Sbjct: 95 PRMNNMSF 102 Score = 78.2 bits (184), Expect = 2e-13 Identities = 36/46 (78%), Positives = 40/46 (86%) Frame = +1 Query: 262 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SSI+GAIN Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAIN 163 Score = 33.9 bits (74), Expect = 3.5 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = +2 Query: 590 FLDPAGGGDPHLYPHLIF 643 F DPAGGGDP LY HL + Sbjct: 219 FFDPAGGGDPILYQHLFW 236 >UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio (Zebrafish) (Brachydanio rerio) Length = 516 Score = 81.0 bits (191), Expect = 2e-14 Identities = 39/68 (57%), Positives = 46/68 (67%) Frame = +2 Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193 LLIRAEL PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AF Sbjct: 35 LLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPLMIGAPDMAF 94 Query: 194 PRINNIRF 217 PR+NN+ F Sbjct: 95 PRMNNMSF 102 Score = 78.2 bits (184), Expect = 2e-13 Identities = 36/46 (78%), Positives = 40/46 (86%) Frame = +1 Query: 262 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SSI+GAIN Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAIN 163 Score = 33.9 bits (74), Expect = 3.5 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = +2 Query: 590 FLDPAGGGDPHLYPHLIF 643 F DPAGGGDP LY HL + Sbjct: 219 FFDPAGGGDPILYQHLFW 236 >UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; cellular organisms|Rep: Cytochrome c oxidase subunit I - Pandaka lidwilli Length = 507 Score = 80.6 bits (190), Expect = 3e-14 Identities = 38/68 (55%), Positives = 46/68 (67%) Frame = +2 Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193 LLIRAEL PG+L+GDDQIYN IVTAHA N L+PL++GAPD+AF Sbjct: 24 LLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAF 83 Query: 194 PRINNIRF 217 PR+NN+ F Sbjct: 84 PRMNNMSF 91 Score = 78.2 bits (184), Expect = 2e-13 Identities = 36/46 (78%), Positives = 40/46 (86%) Frame = +1 Query: 262 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 +E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAGISSI+GAIN Sbjct: 107 IEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAIN 152 >UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; Bilateria|Rep: Cytochrome c oxidase subunit I - Homalopoma maculosa Length = 219 Score = 80.2 bits (189), Expect = 4e-14 Identities = 38/68 (55%), Positives = 45/68 (66%) Frame = +2 Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193 LLIR ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AF Sbjct: 18 LLIRVELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAF 77 Query: 194 PRINNIRF 217 PR+NN+ F Sbjct: 78 PRLNNMSF 85 Score = 80.2 bits (189), Expect = 4e-14 Identities = 37/46 (80%), Positives = 41/46 (89%) Frame = +1 Query: 262 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SSI+GA+N Sbjct: 101 VESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSILGAVN 146 Score = 33.9 bits (74), Expect = 3.5 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = +2 Query: 590 FLDPAGGGDPHLYPHLIF 643 F DPAGGGDP LY HL + Sbjct: 202 FFDPAGGGDPILYQHLFW 219 >UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498; root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens (Human) Length = 513 Score = 79.4 bits (187), Expect = 7e-14 Identities = 38/68 (55%), Positives = 46/68 (67%) Frame = +2 Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193 LLIRAELG PG+L+G+D IYN IVTAHA N LVPL++GAPD+AF Sbjct: 35 LLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAF 94 Query: 194 PRINNIRF 217 PR+NN+ F Sbjct: 95 PRMNNMSF 102 Score = 75.8 bits (178), Expect = 9e-13 Identities = 35/47 (74%), Positives = 40/47 (85%) Frame = +1 Query: 259 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 +VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG+SSI+GAIN Sbjct: 117 MVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAIN 163 Score = 33.9 bits (74), Expect = 3.5 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = +2 Query: 590 FLDPAGGGDPHLYPHLIF 643 F DPAGGGDP LY HL + Sbjct: 219 FFDPAGGGDPILYQHLFW 236 >UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides borealis Length = 513 Score = 78.2 bits (184), Expect = 2e-13 Identities = 40/68 (58%), Positives = 47/68 (69%) Frame = +2 Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193 LLIRAELG PG+L+GDDQ N IVTAHA N LVPL++GAPD+AF Sbjct: 36 LLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAF 95 Query: 194 PRINNIRF 217 PR+NN+ F Sbjct: 96 PRMNNMSF 103 >UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Watasenia scintillans|Rep: Cytochrome c oxidase subunit I - Watasenia scintillans (Sparkling enope) Length = 217 Score = 77.8 bits (183), Expect = 2e-13 Identities = 36/68 (52%), Positives = 44/68 (64%) Frame = +2 Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193 L+IR ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AF Sbjct: 19 LMIRTELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAF 78 Query: 194 PRINNIRF 217 PR+NN+ F Sbjct: 79 PRMNNMSF 86 Score = 38.3 bits (85), Expect = 0.16 Identities = 17/22 (77%), Positives = 20/22 (90%) Frame = +1 Query: 328 GRSVDLAIFSLHLAGISSIIGA 393 G SVDLAIF LHLAG+SSI+G+ Sbjct: 122 GPSVDLAIFPLHLAGVSSILGS 143 >UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Naupactini|Rep: Cytochrome c oxidase subunit I - Galapaganus collaris Length = 406 Score = 77.0 bits (181), Expect = 4e-13 Identities = 36/46 (78%), Positives = 40/46 (86%) Frame = +1 Query: 262 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ SI+GAIN Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXSILGAIN 82 Score = 33.9 bits (74), Expect = 3.5 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = +2 Query: 590 FLDPAGGGDPHLYPHLIF 643 F DPAGGGDP LY HL + Sbjct: 138 FFDPAGGGDPILYQHLFW 155 >UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742; Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia melitaearum (Parasitoid wasp) Length = 499 Score = 77.0 bits (181), Expect = 4e-13 Identities = 36/68 (52%), Positives = 47/68 (69%) Frame = +2 Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193 L+IR ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++F Sbjct: 19 LIIRLELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSF 78 Query: 194 PRINNIRF 217 PR+NN+ F Sbjct: 79 PRMNNMSF 86 Score = 68.1 bits (159), Expect = 2e-10 Identities = 36/67 (53%), Positives = 45/67 (67%) Frame = +1 Query: 199 NK*YKILTPTPLPYIINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 378 N + +L P+ L I++ + G GTG TVYPPLS + H G SVDL IFSLHLAG S Sbjct: 83 NMSFWLLIPSLLLLILSM--FINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGAS 140 Query: 379 SIIGAIN 399 SI+GA+N Sbjct: 141 SIMGAVN 147 Score = 32.7 bits (71), Expect = 8.1 Identities = 12/18 (66%), Positives = 14/18 (77%) Frame = +2 Query: 590 FLDPAGGGDPHLYPHLIF 643 F DP+GGGDP LY HL + Sbjct: 203 FFDPSGGGDPILYQHLFW 220 >UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I - Placozoan sp. BZ2423 Length = 498 Score = 76.2 bits (179), Expect = 7e-13 Identities = 35/68 (51%), Positives = 44/68 (64%) Frame = +2 Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193 +LIR EL +PGS++GDD +YN IVTAHA N VPL++GAPD+AF Sbjct: 36 MLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPLMIGAPDMAF 95 Query: 194 PRINNIRF 217 PR+NNI F Sbjct: 96 PRLNNISF 103 Score = 75.8 bits (178), Expect = 9e-13 Identities = 36/57 (63%), Positives = 45/57 (78%) Frame = +1 Query: 229 PLPYIINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 P +++ +VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG+SSI+GA+N Sbjct: 108 PALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMN 164 Score = 33.9 bits (74), Expect = 3.5 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = +2 Query: 590 FLDPAGGGDPHLYPHLIF 643 F DPAGGGDP LY HL + Sbjct: 220 FFDPAGGGDPILYQHLFW 237 >UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|Rep: Endonuclease - Saccharomyces servazzii (Yeast) Length = 675 Score = 74.1 bits (174), Expect = 3e-12 Identities = 36/47 (76%), Positives = 40/47 (85%) Frame = +1 Query: 259 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 +VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL ISS++GAIN Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAIN 164 Score = 52.8 bits (121), Expect = 7e-06 Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 2/70 (2%) Frame = +2 Query: 14 LLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187 ++IR EL PGS L G+ Q++N +V HA N ++PL++GA D+ Sbjct: 34 MIIRMELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDM 93 Query: 188 AFPRINNIRF 217 +FPRIN+I F Sbjct: 94 SFPRINSIGF 103 >UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit 1 - Munidopsis verrucosus Length = 154 Score = 72.9 bits (171), Expect = 6e-12 Identities = 43/88 (48%), Positives = 51/88 (57%) Frame = +1 Query: 136 WRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKRIVENGAGTG*TVYPPLSSN 315 W IWKL P NK YKILT PL Y KR N + PL+S+ Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKR---NSS--------PLASS 76 Query: 316 IAHRGRSVDLAIFSLHLAGISSIIGAIN 399 IAH G SVD+AIFSLHLAG+SSI+G++N Sbjct: 77 IAHAGASVDMAIFSLHLAGVSSILGSVN 104 >UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha precursor (DNA endonuclease I-SceIV) [Contains: Truncated non-functional cytochrome oxidase 1; DNA endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep: Intron-encoded DNA endonuclease aI5 alpha precursor (DNA endonuclease I-SceIV) [Contains: Truncated non-functional cytochrome oxidase 1; DNA endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I- SceIV)] - Saccharomyces cerevisiae (Baker's yeast) Length = 630 Score = 72.9 bits (171), Expect = 6e-12 Identities = 35/47 (74%), Positives = 40/47 (85%) Frame = +1 Query: 259 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS++GAIN Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAIN 164 Score = 57.2 bits (132), Expect = 3e-07 Identities = 31/70 (44%), Positives = 39/70 (55%), Gaps = 2/70 (2%) Frame = +2 Query: 14 LLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187 L+IR EL PGS L G+ Q++N +V HA N L+PL++GA D Sbjct: 34 LIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDT 93 Query: 188 AFPRINNIRF 217 AFPRINNI F Sbjct: 94 AFPRINNIAF 103 >UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 precursor (DNA endonuclease I- SceII) [Contains: Truncated non-functional cytochrome oxidase 1; DNA endonuclease aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]; n=4; Saccharomycetales|Rep: Intron-encoded DNA endonuclease aI4 precursor (DNA endonuclease I- SceII) [Contains: Truncated non-functional cytochrome oxidase 1; DNA endonuclease aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)] - Saccharomyces cerevisiae (Baker's yeast) Length = 556 Score = 72.9 bits (171), Expect = 6e-12 Identities = 35/47 (74%), Positives = 40/47 (85%) Frame = +1 Query: 259 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS++GAIN Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAIN 164 Score = 57.2 bits (132), Expect = 3e-07 Identities = 31/70 (44%), Positives = 39/70 (55%), Gaps = 2/70 (2%) Frame = +2 Query: 14 LLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187 L+IR EL PGS L G+ Q++N +V HA N L+PL++GA D Sbjct: 34 LIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDT 93 Query: 188 AFPRINNIRF 217 AFPRINNI F Sbjct: 94 AFPRINNIAF 103 >UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8 precursor [Contains: Truncated non-functional cytochrome oxidase 1; Intron-encoded endonuclease aI8 (EC 3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded endonuclease aI8 precursor [Contains: Truncated non-functional cytochrome oxidase 1; Intron-encoded endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut fungus) Length = 645 Score = 71.3 bits (167), Expect = 2e-11 Identities = 34/46 (73%), Positives = 39/46 (84%) Frame = +1 Query: 262 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS++GA+N Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMN 163 Score = 64.9 bits (151), Expect = 2e-09 Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 2/70 (2%) Frame = +2 Query: 14 LLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187 +LIR EL PG L GD Q+YN I+TAHA N LVP+++GAPD+ Sbjct: 33 VLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDM 92 Query: 188 AFPRINNIRF 217 AFPR+NNI F Sbjct: 93 AFPRLNNISF 102 Score = 33.5 bits (73), Expect = 4.6 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = +2 Query: 590 FLDPAGGGDPHLYPHLIF 643 F DPAGGGDP LY HL + Sbjct: 219 FYDPAGGGDPILYQHLFW 236 >UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5 precursor [Contains: Truncated non-functional cytochrome oxidase 1; Intron-encoded endonuclease aI5 (EC 3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable intron-encoded endonuclease aI5 precursor [Contains: Truncated non-functional cytochrome oxidase 1; Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago maydis (Smut fungus) Length = 536 Score = 71.3 bits (167), Expect = 2e-11 Identities = 34/46 (73%), Positives = 39/46 (84%) Frame = +1 Query: 262 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS++GA+N Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMN 163 Score = 64.9 bits (151), Expect = 2e-09 Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 2/70 (2%) Frame = +2 Query: 14 LLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187 +LIR EL PG L GD Q+YN I+TAHA N LVP+++GAPD+ Sbjct: 33 VLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDM 92 Query: 188 AFPRINNIRF 217 AFPR+NNI F Sbjct: 93 AFPRLNNISF 102 Score = 33.1 bits (72), Expect = 6.1 Identities = 13/16 (81%), Positives = 13/16 (81%) Frame = +2 Query: 590 FLDPAGGGDPHLYPHL 637 F DPAGGGDP LY HL Sbjct: 219 FYDPAGGGDPILYQHL 234 >UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4 precursor [Contains: Truncated non-functional cytochrome oxidase 1; Intron-encoded endonuclease aI4 (EC 3.1.-.-)]; n=3; Basidiomycota|Rep: Probable intron-encoded endonuclease aI4 precursor [Contains: Truncated non-functional cytochrome oxidase 1; Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago maydis (Smut fungus) Length = 530 Score = 71.3 bits (167), Expect = 2e-11 Identities = 34/46 (73%), Positives = 39/46 (84%) Frame = +1 Query: 262 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS++GA+N Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMN 163 Score = 64.9 bits (151), Expect = 2e-09 Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 2/70 (2%) Frame = +2 Query: 14 LLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187 +LIR EL PG L GD Q+YN I+TAHA N LVP+++GAPD+ Sbjct: 33 VLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDM 92 Query: 188 AFPRINNIRF 217 AFPR+NNI F Sbjct: 93 AFPRLNNISF 102 >UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; n=1; Saccharomyces castellii|Rep: I-SceII DNA endonuclease-like protein - Saccharomyces castellii (Yeast) Length = 598 Score = 70.9 bits (166), Expect = 2e-11 Identities = 33/47 (70%), Positives = 40/47 (85%) Frame = +1 Query: 259 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 +VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+ ISS++GAIN Sbjct: 118 LVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAIN 164 Score = 54.8 bits (126), Expect = 2e-06 Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 2/70 (2%) Frame = +2 Query: 14 LLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187 L+IR EL PG L G++Q++N +V HA N ++PL++GA D Sbjct: 34 LIIRLELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMIGATDT 93 Query: 188 AFPRINNIRF 217 AFPRINNI F Sbjct: 94 AFPRINNIGF 103 >UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep: Cytochrome oxidase subunits 1 and 2 polyprotein - Phaeosphaeria nodorum SN15 Length = 789 Score = 70.9 bits (166), Expect = 2e-11 Identities = 35/64 (54%), Positives = 47/64 (73%) Frame = +1 Query: 208 YKILTPTPLPYIINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSII 387 Y +L P+ + ++ F +ENG GTG T+YPPLS +H G SVDLAIF LHL+GISS++ Sbjct: 103 YLLLIPSIVLFL--FAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISSLL 160 Query: 388 GAIN 399 GA+N Sbjct: 161 GAMN 164 Score = 61.3 bits (142), Expect = 2e-08 Identities = 31/69 (44%), Positives = 40/69 (57%), Gaps = 1/69 (1%) Frame = +2 Query: 14 LLIRAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIA 190 +LIR EL PG I D+Q+YN+I+TAHA N L+PL LG PD+ Sbjct: 35 VLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLPLGLGGPDMG 94 Query: 191 FPRINNIRF 217 FPR+NNI + Sbjct: 95 FPRLNNISY 103 >UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931; cellular organisms|Rep: Cytochrome c oxidase subunit 1 - Arabidopsis thaliana (Mouse-ear cress) Length = 527 Score = 70.5 bits (165), Expect = 3e-11 Identities = 35/61 (57%), Positives = 46/61 (75%) Frame = +1 Query: 217 LTPTPLPYIINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAI 396 L P L +++ +VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G+SSI+G+I Sbjct: 107 LLPPSLLLLLS-SALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSI 165 Query: 397 N 399 N Sbjct: 166 N 166 Score = 63.3 bits (147), Expect = 5e-09 Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 2/70 (2%) Frame = +2 Query: 14 LLIRAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187 +LIR EL PG I G+ Q+YN ++TAHA N VP+++GAPD+ Sbjct: 36 VLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGAPDM 95 Query: 188 AFPRINNIRF 217 AFPR+NNI F Sbjct: 96 AFPRLNNISF 105 Score = 33.9 bits (74), Expect = 3.5 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = +2 Query: 590 FLDPAGGGDPHLYPHLIF 643 F DPAGGGDP LY HL + Sbjct: 222 FFDPAGGGDPILYQHLFW 239 >UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; Eukaryota|Rep: Cytochrome c oxidase subunit I - Paracoccidioides brasiliensis Length = 710 Score = 70.1 bits (164), Expect = 4e-11 Identities = 32/57 (56%), Positives = 40/57 (70%) Frame = +1 Query: 229 PLPYIINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 P ++ F I+ENG GTG T+YPPLS +H VDL IF LHL+GISS++GAIN Sbjct: 134 PSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISSLLGAIN 190 Score = 59.7 bits (138), Expect = 6e-08 Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 1/69 (1%) Frame = +2 Query: 14 LLIRAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIA 190 +LIR EL PG I D+Q+YN+I+T+H N L+P+++G PD+A Sbjct: 61 VLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMA 120 Query: 191 FPRINNIRF 217 FPR+NN+ + Sbjct: 121 FPRLNNVSY 129 >UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; cellular organisms|Rep: Cytochrome c oxidase subunit 1 - Chondrus crispus (Carragheen) Length = 532 Score = 68.9 bits (161), Expect = 1e-10 Identities = 32/47 (68%), Positives = 39/47 (82%) Frame = +1 Query: 259 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 +VE G GTG TVYPPLSS +H G +VDLAIFSLH++G SSI+GA+N Sbjct: 125 LVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVN 171 Score = 65.3 bits (152), Expect = 1e-09 Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 2/74 (2%) Frame = +2 Query: 2 GTRRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 175 G +LIR EL P + L+G+ QIYN ++TAHA N LVP+++G Sbjct: 37 GCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPVMIGGFGNWLVPIMIG 96 Query: 176 APDIAFPRINNIRF 217 +PD+AFPR+NNI F Sbjct: 97 SPDMAFPRLNNISF 110 >UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase subunit I - Myrmarachne sp. G FSC-2006 Length = 129 Score = 68.5 bits (160), Expect = 1e-10 Identities = 35/58 (60%), Positives = 43/58 (74%) Frame = +1 Query: 223 PTPLPYIINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAI 396 P+ L Y+I+ +VE G G G TVYPPL+S + H G SVD AIFSLHLAG SSI+GA+ Sbjct: 2 PSLLLYVIS--SMVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASSIMGAM 57 >UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast) Length = 763 Score = 65.7 bits (153), Expect = 9e-10 Identities = 30/64 (46%), Positives = 48/64 (75%) Frame = +1 Query: 208 YKILTPTPLPYIINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSII 387 + +L P+ L +++ +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SSI Sbjct: 120 FVVLLPSMLFAVLSC--LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIF 177 Query: 388 GAIN 399 GAIN Sbjct: 178 GAIN 181 Score = 51.2 bits (117), Expect = 2e-05 Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 2/70 (2%) Frame = +2 Query: 14 LLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187 +L+R EL NP L+ + Q++N ++TAHA N LVPL +G+ D Sbjct: 51 VLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDT 110 Query: 188 AFPRINNIRF 217 AFPRINN+ F Sbjct: 111 AFPRINNLAF 120 >UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast) Length = 676 Score = 65.7 bits (153), Expect = 9e-10 Identities = 30/64 (46%), Positives = 48/64 (75%) Frame = +1 Query: 208 YKILTPTPLPYIINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSII 387 + +L P+ L +++ +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SSI Sbjct: 120 FVVLLPSMLFAVLSC--LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIF 177 Query: 388 GAIN 399 GAIN Sbjct: 178 GAIN 181 Score = 51.2 bits (117), Expect = 2e-05 Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 2/70 (2%) Frame = +2 Query: 14 LLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187 +L+R EL NP L+ + Q++N ++TAHA N LVPL +G+ D Sbjct: 51 VLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDT 110 Query: 188 AFPRINNIRF 217 AFPRINN+ F Sbjct: 111 AFPRINNLAF 120 >UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep: Cox-i3 protein - Candida stellata (Yeast) Length = 588 Score = 65.7 bits (153), Expect = 9e-10 Identities = 30/64 (46%), Positives = 48/64 (75%) Frame = +1 Query: 208 YKILTPTPLPYIINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSII 387 + +L P+ L +++ +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SSI Sbjct: 120 FVVLLPSMLFAVLSC--LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIF 177 Query: 388 GAIN 399 GAIN Sbjct: 178 GAIN 181 Score = 51.2 bits (117), Expect = 2e-05 Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 2/70 (2%) Frame = +2 Query: 14 LLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187 +L+R EL NP L+ + Q++N ++TAHA N LVPL +G+ D Sbjct: 51 VLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDT 110 Query: 188 AFPRINNIRF 217 AFPRINN+ F Sbjct: 111 AFPRINNLAF 120 >UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep: Cox-i2 protein - Candida stellata (Yeast) Length = 586 Score = 65.7 bits (153), Expect = 9e-10 Identities = 30/64 (46%), Positives = 48/64 (75%) Frame = +1 Query: 208 YKILTPTPLPYIINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSII 387 + +L P+ L +++ +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SSI Sbjct: 120 FVVLLPSMLFAVLSC--LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIF 177 Query: 388 GAIN 399 GAIN Sbjct: 178 GAIN 181 Score = 51.2 bits (117), Expect = 2e-05 Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 2/70 (2%) Frame = +2 Query: 14 LLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187 +L+R EL NP L+ + Q++N ++TAHA N LVPL +G+ D Sbjct: 51 VLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDT 110 Query: 188 AFPRINNIRF 217 AFPRINN+ F Sbjct: 111 AFPRINNLAF 120 >UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa group|Rep: COX1-i5 protein - Yarrowia lipolytica (Candida lipolytica) Length = 608 Score = 64.9 bits (151), Expect = 2e-09 Identities = 33/57 (57%), Positives = 41/57 (71%) Frame = +1 Query: 229 PLPYIINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 P +I +VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G SS++GAIN Sbjct: 113 PSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAIN 169 Score = 55.2 bits (127), Expect = 1e-06 Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 2/69 (2%) Frame = +2 Query: 17 LIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIA 190 +IR EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+A Sbjct: 40 IIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMA 99 Query: 191 FPRINNIRF 217 F R+NNI F Sbjct: 100 FARLNNISF 108 >UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2 precursor [Contains: Truncated non-functional cytochrome oxidase 1; Intron-encoded endonuclease aI2 (EC 3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable intron-encoded endonuclease aI2 precursor [Contains: Truncated non-functional cytochrome oxidase 1; Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago maydis (Smut fungus) Length = 533 Score = 64.9 bits (151), Expect = 2e-09 Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 2/70 (2%) Frame = +2 Query: 14 LLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187 +LIR EL PG L GD Q+YN I+TAHA N LVP+++GAPD+ Sbjct: 33 VLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDM 92 Query: 188 AFPRINNIRF 217 AFPR+NNI F Sbjct: 93 AFPRLNNISF 102 >UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 - Naegleria gruberi Length = 633 Score = 64.5 bits (150), Expect = 2e-09 Identities = 31/45 (68%), Positives = 33/45 (73%) Frame = +1 Query: 265 ENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 E G GTG TVYPPLSS +H G SVDL IFS HL GI SI+ AIN Sbjct: 123 EGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAIN 167 Score = 52.0 bits (119), Expect = 1e-05 Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Frame = +2 Query: 14 LLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187 +L+R EL PG L G+ YN I T H N VP+++GAPD+ Sbjct: 37 MLMRLELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDM 96 Query: 188 AFPRINNIRF 217 +FPR+NN F Sbjct: 97 SFPRLNNFSF 106 >UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I - Trichoderma reesei (Hypocrea jecorina) Length = 635 Score = 64.5 bits (150), Expect = 2e-09 Identities = 32/61 (52%), Positives = 43/61 (70%), Gaps = 4/61 (6%) Frame = +1 Query: 229 PLPYIINFKRIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAI 396 P ++ F I+E G GTG T+ YPPLS +H G SVDLAIF+LHL+G+SS++G+I Sbjct: 136 PSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSSLLGSI 195 Query: 397 N 399 N Sbjct: 196 N 196 Score = 63.7 bits (148), Expect = 4e-09 Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 1/69 (1%) Frame = +2 Query: 14 LLIRAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIA 190 +LIR EL PG I ++Q+YN+I+TAHA N L+PL++G PD+A Sbjct: 63 VLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPALIGGFGNFLMPLMIGGPDMA 122 Query: 191 FPRINNIRF 217 FPR+NNI F Sbjct: 123 FPRLNNISF 131 >UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha (Liverwort) Length = 434 Score = 62.5 bits (145), Expect = 9e-09 Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 2/70 (2%) Frame = +2 Query: 14 LLIRAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187 +LIR EL PG+ I G+ Q+YN ++TAHA N VP+++G+PD+ Sbjct: 37 VLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGSPDM 96 Query: 188 AFPRINNIRF 217 AFPR+NNI F Sbjct: 97 AFPRLNNISF 106 >UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteobacteria|Rep: Cytochrome-c oxidase - Sphingomonas sp. SKA58 Length = 556 Score = 58.0 bits (134), Expect = 2e-07 Identities = 29/44 (65%), Positives = 35/44 (79%) Frame = +1 Query: 268 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 NGAGTG TVY PLS++ G +VD+AI SLH+AG SSI+GAIN Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAIN 206 Score = 44.8 bits (101), Expect = 0.002 Identities = 19/50 (38%), Positives = 28/50 (56%) Frame = +2 Query: 68 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 217 ++N ++TAH N VP+++GAPD+AFPR+NNI F Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISF 142 >UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes cretinus|Rep: Cytochrome c oxidase subunit I - Aedes cretinus Length = 153 Score = 56.4 bits (130), Expect = 6e-07 Identities = 28/47 (59%), Positives = 34/47 (72%) Frame = +1 Query: 217 LTPTPLPYIINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 357 + P L +++ +VENGAGTG TVYPPLSS AH G SVDLAI+S Sbjct: 20 MLPPSLTLLLS-SSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65 Score = 33.9 bits (74), Expect = 3.5 Identities = 13/18 (72%), Positives = 17/18 (94%) Frame = +2 Query: 164 LILGAPDIAFPRINNIRF 217 L+LGAPD+AFPR+NN+ F Sbjct: 1 LMLGAPDMAFPRMNNMSF 18 >UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular organisms|Rep: Cytochrome-c oxidase - Jannaschia sp. (strain CCS1) Length = 628 Score = 55.6 bits (128), Expect = 1e-06 Identities = 23/47 (48%), Positives = 35/47 (74%) Frame = +1 Query: 259 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 +++ GAG G T YPP+S+ R+VD AIF++H++G SSI+G+IN Sbjct: 223 MIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGASSILGSIN 269 Score = 44.4 bits (100), Expect = 0.002 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Frame = +2 Query: 23 RAELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 196 +A LG L G D ++N ++T H N +PL++GAPD+AFP Sbjct: 142 QALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFP 201 Query: 197 RINNIRF 217 R+NN+ + Sbjct: 202 RLNNLSY 208 >UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica (Candida lipolytica) Length = 457 Score = 55.2 bits (127), Expect = 1e-06 Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 2/69 (2%) Frame = +2 Query: 17 LIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIA 190 +IR EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+A Sbjct: 40 IIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMA 99 Query: 191 FPRINNIRF 217 F R+NNI F Sbjct: 100 FARLNNISF 108 >UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula unguis Length = 573 Score = 54.8 bits (126), Expect = 2e-06 Identities = 25/43 (58%), Positives = 33/43 (76%) Frame = +1 Query: 271 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 G G G T+YPPLS++ G +DLA+FSLH+AG+SSI G+IN Sbjct: 123 GLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSSIAGSIN 165 Score = 39.1 bits (87), Expect = 0.093 Identities = 18/64 (28%), Positives = 32/64 (50%) Frame = +2 Query: 20 IRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 199 +R EL +PG + +Y++I+T HA N +PL++ D++ PR Sbjct: 39 MRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPTSIGGLGNWFIPLMIKIKDLSMPR 98 Query: 200 INNI 211 +NN+ Sbjct: 99 LNNL 102 >UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; Nematoda|Rep: Cytochrome c oxidase subunit I - Onchocerca volvulus Length = 548 Score = 54.8 bits (126), Expect = 2e-06 Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%) Frame = +2 Query: 14 LLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187 +LIR EL +PG G Q+YN+++T H N ++PL+LGAP++ Sbjct: 44 MLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEM 103 Query: 188 AFPRINNIRF 217 AFPR+N + F Sbjct: 104 AFPRVNALSF 113 Score = 38.3 bits (85), Expect = 0.16 Identities = 20/46 (43%), Positives = 25/46 (54%) Frame = +1 Query: 262 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 + G G+ T YPPLS S+D I LH GI S++GAIN Sbjct: 129 IGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHTVGIGSLLGAIN 173 >UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I - Aplidium nordmanni Length = 227 Score = 54.4 bits (125), Expect = 2e-06 Identities = 25/43 (58%), Positives = 30/43 (69%) Frame = +1 Query: 271 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 G G VYPP SS +AH +VDL IF LHLAGISS +G++N Sbjct: 111 GVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISSXLGSMN 153 Score = 35.5 bits (78), Expect = 1.1 Identities = 24/68 (35%), Positives = 29/68 (42%) Frame = +2 Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193 L R L G +IG QI VTA A L PL +GAP +A Sbjct: 25 LXXRXXLSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGAPXMAX 84 Query: 194 PRINNIRF 217 PR+ N+ F Sbjct: 85 PRLXNMSF 92 >UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like terminal oxidase, subunit I - Haloquadratum walsbyi (strain DSM 16790) Length = 634 Score = 50.0 bits (114), Expect = 5e-05 Identities = 26/72 (36%), Positives = 39/72 (54%) Frame = +2 Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181 G +L+R EL +PG + + YN+++T+H N L+PL++GA Sbjct: 113 GLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIGAD 171 Query: 182 DIAFPRINNIRF 217 D+AFPRIN I F Sbjct: 172 DMAFPRINAIAF 183 Score = 36.3 bits (80), Expect = 0.66 Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 5/47 (10%) Frame = +1 Query: 274 AGTG*TVYPPLS-----SNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 A TG T+Y PLS N A+ G VDL + LHL+G+S+ +G+IN Sbjct: 206 AQTGWTMYTPLSVGEGMGNQANAG--VDLMLLGLHLSGVSATMGSIN 250 >UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyveromyces thermotolerans|Rep: Putative DNA endonuclease - Kluyveromyces thermotolerans (Yeast) Length = 542 Score = 49.6 bits (113), Expect = 7e-05 Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%) Frame = +2 Query: 14 LLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187 ++IR EL PG+ L G+ Q++N +V HA N L+PL++GA D+ Sbjct: 34 VIIRLELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDM 93 Query: 188 AFPRINNIRF 217 +F R+NNI F Sbjct: 94 SFARLNNISF 103 >UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase, subunit I - Myxococcus xanthus (strain DK 1622) Length = 556 Score = 49.2 bits (112), Expect = 9e-05 Identities = 27/68 (39%), Positives = 32/68 (47%) Frame = +2 Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181 G LLIR EL PG I D YN T H N ++PL+LGA Sbjct: 61 GIFALLIRVELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAK 120 Query: 182 DIAFPRIN 205 D+AFPR+N Sbjct: 121 DVAFPRLN 128 >UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38; Bacteria|Rep: Cytochrome c oxidase subunit I type - Anaeromyxobacter sp. Fw109-5 Length = 555 Score = 48.8 bits (111), Expect = 1e-04 Identities = 25/68 (36%), Positives = 34/68 (50%) Frame = +2 Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193 LLIR EL PG I D YN + T H N L+P+++GA D+AF Sbjct: 58 LLIRLELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAF 117 Query: 194 PRINNIRF 217 P++N + F Sbjct: 118 PKLNLLSF 125 >UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; Bilateria|Rep: Cytochrome c oxidase subunit I - Schistosoma mansoni (Blood fluke) Length = 609 Score = 48.8 bits (111), Expect = 1e-04 Identities = 26/56 (46%), Positives = 35/56 (62%) Frame = +1 Query: 232 LPYIINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 +P I + + G G G T+YPPLS G VD +FSLHLAG+SS+IG++N Sbjct: 204 VPSIFYMELSLYYGCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSSLIGSVN 258 >UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eukaryota|Rep: Cytochrome c oxidase subunit 1 - Leishmania tarentolae (Sauroleishmania tarentolae) Length = 549 Score = 48.8 bits (111), Expect = 1e-04 Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 2/70 (2%) Frame = +2 Query: 14 LLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 187 L IR EL G L GD Q YN ++T+H N +P++ G PD+ Sbjct: 36 LFIRLELSLIGCGILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDM 95 Query: 188 AFPRINNIRF 217 FPR+NN+ F Sbjct: 96 VFPRLNNMSF 105 Score = 43.6 bits (98), Expect = 0.004 Identities = 20/47 (42%), Positives = 28/47 (59%) Frame = +1 Query: 259 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 + E G G G T+YP L H + D +F++HL GISSI+ +IN Sbjct: 120 LTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSIN 166 >UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Theileria|Rep: Cytochrome c oxidase subunit 1 - Theileria parva Length = 481 Score = 46.4 bits (105), Expect = 6e-04 Identities = 23/58 (39%), Positives = 40/58 (68%), Gaps = 1/58 (1%) Frame = +1 Query: 229 PLPYIINFKRI-VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 P+ +++ I +E G+GTG T+YPPLS+++++ G +D IF L AGI+S + ++N Sbjct: 114 PIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIASTLSSVN 169 Score = 34.7 bits (76), Expect = 2.0 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Frame = +2 Query: 14 LLIRAELGNPG-SLIGDD--QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPD 184 +LIR EL G +I D +IYN + T H N L P++LG D Sbjct: 40 VLIRTELSMSGLKIITMDTLEIYNLLFTLHGLIMVFFNIMTGLFGGIGNYLYPVLLGYCD 99 Query: 185 IAFPRIN 205 + +PR+N Sbjct: 100 VVYPRVN 106 >UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1; Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit 1 - Beggiatoa sp. PS Length = 525 Score = 46.0 bits (104), Expect = 8e-04 Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Frame = +2 Query: 2 GTRRLLIRAELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 178 G +LIR EL G I DD +YNT + H N +PL++GA Sbjct: 33 GIMAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGA 92 Query: 179 PDIAFPRIN 205 D+AFPR+N Sbjct: 93 KDVAFPRVN 101 >UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; Actinobacteria (class)|Rep: Cytochrome c oxidase subunit 1 - Corynebacterium glutamicum (Brevibacterium flavum) Length = 584 Score = 44.8 bits (101), Expect = 0.002 Identities = 26/72 (36%), Positives = 35/72 (48%) Frame = +2 Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181 G LLIRAEL PG ++ +N + T H N ++PL +GAP Sbjct: 57 GLMALLIRAELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGAP 115 Query: 182 DIAFPRINNIRF 217 D+AFPR+N F Sbjct: 116 DVAFPRLNAFGF 127 >UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC 1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus thermophilus|Rep: Cytochrome c oxidase polypeptide I+III (EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) Length = 791 Score = 43.6 bits (98), Expect = 0.004 Identities = 24/68 (35%), Positives = 32/68 (47%) Frame = +2 Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181 G LLIR +L P + + YN I+T H N +VPL+LGA Sbjct: 43 GVFSLLIRTQLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGAR 102 Query: 182 DIAFPRIN 205 D+A PR+N Sbjct: 103 DVALPRVN 110 >UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase polypeptide I) (Quinol oxidase aa3-600, subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45; Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase polypeptide I) (Quinol oxidase aa3-600, subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus subtilis Length = 649 Score = 43.2 bits (97), Expect = 0.006 Identities = 25/72 (34%), Positives = 34/72 (47%) Frame = +2 Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181 G L++RA+L P + D YN I T H N +VPL +GA Sbjct: 72 GVDGLMMRAQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAMPFLIGLI-NVVVPLQIGAR 130 Query: 182 DIAFPRINNIRF 217 D+AFP +NN+ F Sbjct: 131 DVAFPYLNNLSF 142 >UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; Bacteria|Rep: Cytochrome c oxidase subunit I - Synechococcus sp. (strain CC9311) Length = 564 Score = 42.7 bits (96), Expect = 0.008 Identities = 22/72 (30%), Positives = 35/72 (48%) Frame = +2 Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181 G +++R EL P + + D +YN + T H N L+P ++GAP Sbjct: 55 GLLAMIVRGELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAP 113 Query: 182 DIAFPRINNIRF 217 D+AFP++N F Sbjct: 114 DMAFPKLNAAAF 125 >UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; Alveolata|Rep: Cytochrome c oxidase subunit 1 - Plasmodium falciparum Length = 476 Score = 42.7 bits (96), Expect = 0.008 Identities = 21/59 (35%), Positives = 38/59 (64%), Gaps = 2/59 (3%) Frame = +1 Query: 229 PLPYI-INFKRIVENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISSIIGAIN 399 P+ ++ + E G GTG T+YPPLS+++ +VD+ IF L ++G++SI+ ++N Sbjct: 111 PIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVASIMSSLN 169 Score = 35.1 bits (77), Expect = 1.5 Identities = 15/48 (31%), Positives = 24/48 (50%) Frame = +2 Query: 68 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNI 211 +YN I T H N +P++ G+P++A+PRIN+I Sbjct: 58 LYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRINSI 105 >UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 - Tetrahymena pyriformis Length = 698 Score = 41.9 bits (94), Expect = 0.013 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Frame = +2 Query: 17 LIRAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIA 190 +IR EL +P S GD Y +VTAH N L+P +G+ D+A Sbjct: 84 MIRMELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLIPYHVGSKDVA 143 Query: 191 FPRINNIRF 217 +PR+N+I F Sbjct: 144 YPRLNSIGF 152 >UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp. RS-1 Length = 641 Score = 41.5 bits (93), Expect = 0.018 Identities = 23/68 (33%), Positives = 33/68 (48%) Frame = +2 Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181 G LL+R +LG P + +YN + T H N +VPL++GA Sbjct: 50 GIEALLMRIQLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMIGAR 108 Query: 182 DIAFPRIN 205 D+AFPR+N Sbjct: 109 DMAFPRLN 116 >UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Dicyema misakiense|Rep: Cytochrome c oxidase subunit I - Dicyema misakiense Length = 473 Score = 41.5 bits (93), Expect = 0.018 Identities = 22/42 (52%), Positives = 28/42 (66%) Frame = +1 Query: 274 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 A G T YPPLSS SV+ ++FSLHLAGI+S+I + N Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIASLISSCN 149 Score = 38.3 bits (85), Expect = 0.16 Identities = 22/68 (32%), Positives = 28/68 (41%) Frame = +2 Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193 LL R +L P L D +YN VT H N L+P PD+ F Sbjct: 32 LLFRLQLAFPSILTSD--VYNAFVTLHGLVMVFFAAMPTAIGFFANLLIPYHCNLPDLLF 89 Query: 194 PRINNIRF 217 PR+N + F Sbjct: 90 PRMNALSF 97 >UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I - Aquifex aeolicus Length = 485 Score = 41.1 bits (92), Expect = 0.023 Identities = 19/55 (34%), Positives = 28/55 (50%) Frame = +2 Query: 41 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 205 PG + D + YN ++T H N L+PL++GA D+AFPR+N Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLN 56 >UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena gracilis|Rep: Cytochrome oxidase subunit I - Euglena gracilis Length = 495 Score = 41.1 bits (92), Expect = 0.023 Identities = 19/41 (46%), Positives = 30/41 (73%), Gaps = 1/41 (2%) Frame = +1 Query: 280 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISSIIGAIN 399 +G T+YPPLS+ A G ++DL++ +H+ GISS IG++N Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISSTIGSVN 175 Score = 36.3 bits (80), Expect = 0.66 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 4/72 (5%) Frame = +2 Query: 14 LLIRAELGNPGSLI----GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181 +LIR EL G I + IYN +T H N L+P+++G Sbjct: 41 MLIRMELNTQGLAIVRKVKEVTIYNNWITIHGLIMLFVFIMPVGIGFYGNYLIPMLIGTS 100 Query: 182 DIAFPRINNIRF 217 +++ PR+N I F Sbjct: 101 ELSMPRMNGISF 112 >UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4; Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1 - Halobacterium salinarium (Halobacterium halobium) Length = 593 Score = 40.7 bits (91), Expect = 0.031 Identities = 23/72 (31%), Positives = 33/72 (45%) Frame = +2 Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181 G LL+R EL + +YN ++T+H N +PL++ A Sbjct: 87 GVSVLLMRTELATSSETLISPSLYNGLLTSHGITMLFLFGTPMIAAFG-NYFIPLLIDAD 145 Query: 182 DIAFPRINNIRF 217 D+AFPRIN I F Sbjct: 146 DMAFPRINAIAF 157 Score = 35.5 bits (78), Expect = 1.1 Identities = 18/42 (42%), Positives = 27/42 (64%) Frame = +1 Query: 274 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 A T T+Y PLS ++ +VD+ + LHL G+S+ +GAIN Sbjct: 179 AQTSWTMYTPLSLQMS--SPAVDMMMLGLHLTGVSATMGAIN 218 >UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacterineae|Rep: Cytochrome-c oxidase - Anaeromyxobacter sp. Fw109-5 Length = 596 Score = 40.3 bits (90), Expect = 0.040 Identities = 17/42 (40%), Positives = 26/42 (61%) Frame = +1 Query: 274 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 AG G T Y PLS+N+ G L + ++ + G+SS +GA+N Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVN 196 Score = 34.3 bits (75), Expect = 2.7 Identities = 17/49 (34%), Positives = 22/49 (44%) Frame = +2 Query: 71 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 217 Y I T H N L+PL++GA D+AFPR+N F Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSF 134 >UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces maris DSM 8797 Length = 754 Score = 40.3 bits (90), Expect = 0.040 Identities = 22/72 (30%), Positives = 34/72 (47%) Frame = +2 Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181 G LL+R +L P + +++N + T H N VPL++GA Sbjct: 51 GFEALLMRIQLAFPNNTFLSPEMFNQLFTMHGTTMVFLVGMPVLTGFA-NYFVPLMIGAR 109 Query: 182 DIAFPRINNIRF 217 D+AFPR+N+ F Sbjct: 110 DVAFPRLNSFGF 121 >UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1); n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) - Synechocystis sp. (strain PCC 6803) Length = 551 Score = 38.7 bits (86), Expect = 0.12 Identities = 20/66 (30%), Positives = 31/66 (46%) Frame = +2 Query: 20 IRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 199 +R EL P ++YN ++T H N L+PL++G D+AFPR Sbjct: 52 MRTELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVGTEDMAFPR 110 Query: 200 INNIRF 217 +N + F Sbjct: 111 LNAVAF 116 Score = 32.7 bits (71), Expect = 8.1 Identities = 21/39 (53%), Positives = 23/39 (58%) Frame = +1 Query: 283 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 G T YPPLS G +L I SL L G SSI+GAIN Sbjct: 138 GWTSYPPLSLLSGKWGE--ELWILSLLLVGTSSILGAIN 174 >UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; Bacteria|Rep: Cytochrome C oxidase subunit I - Symbiobacterium thermophilum Length = 628 Score = 37.5 bits (83), Expect = 0.28 Identities = 20/68 (29%), Positives = 32/68 (47%) Frame = +2 Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181 G ++R +L PG + + +N + T HA N +PL++GA Sbjct: 48 GLEAWIMRLQLARPGLEVVTARTFNALFTMHATTMIFLGVMPLLSAFM-NYFLPLMIGAR 106 Query: 182 DIAFPRIN 205 D+AFPR+N Sbjct: 107 DVAFPRLN 114 >UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxidase, subunit 1; n=2; Thermoprotei|Rep: Heme/copper-type cytochrome/quinol oxidase, subunit 1 - Cenarchaeum symbiosum Length = 508 Score = 37.5 bits (83), Expect = 0.28 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%) Frame = +2 Query: 2 GTRRLLIRAELGNPGS-LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 178 G LLIRAEL PG+ I D +N + T H N VP+++ Sbjct: 39 GALALLIRAELFFPGTQFIADSMTFNRMFTVHGTTLIFLFILPFASAVG-NYFVPIMVRY 97 Query: 179 PDIAFPRINNIRF 217 D+A+P++N I F Sbjct: 98 KDMAYPKLNAIAF 110 >UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase subunit I - Eutetramorium sp. BLF m1 Length = 201 Score = 37.1 bits (82), Expect = 0.38 Identities = 16/28 (57%), Positives = 22/28 (78%) Frame = +2 Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHA 97 +LIR EL GS++ +QIYNT+VT+HA Sbjct: 19 MLIRLELETCGSVLRSEQIYNTLVTSHA 46 >UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Halobacteriaceae|Rep: Cytochrome c oxidase subunit I - Haloarcula marismortui (Halobacterium marismortui) Length = 854 Score = 37.1 bits (82), Expect = 0.38 Identities = 24/72 (33%), Positives = 33/72 (45%) Frame = +2 Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181 G LL R EL + G+ + YN V+ H N LVPL +GA Sbjct: 41 GVLALLFRLELISSGADLLGSMGYNQAVSTHGLLMVFWFISPFAFGFA-NYLVPLQIGAD 99 Query: 182 DIAFPRINNIRF 217 D+AFPR+N + + Sbjct: 100 DLAFPRLNALSY 111 >UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis Length = 622 Score = 36.7 bits (81), Expect = 0.50 Identities = 21/72 (29%), Positives = 32/72 (44%) Frame = +2 Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181 G + IR +L P + Q YN ++T H N +VPL +GA Sbjct: 43 GIEAMFIRIQLAKPENAFLSAQAYNEVMTMHGTTMIFLAAMPLLFALM-NAVVPLQIGAR 101 Query: 182 DIAFPRINNIRF 217 D++FP +N + F Sbjct: 102 DVSFPFLNALGF 113 >UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; Deinococcus|Rep: Cytochrome c oxidase, subunit I - Deinococcus radiodurans Length = 820 Score = 36.3 bits (80), Expect = 0.66 Identities = 21/68 (30%), Positives = 28/68 (41%) Frame = +2 Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181 G L IR +L P + YN ++T HA N +PL LG Sbjct: 51 GLLALAIRVQLALPEQTLLVGTTYNQVLTMHAAIMLFFFLIPLGLFGFGNYFLPLQLGVR 110 Query: 182 DIAFPRIN 205 D+A PR+N Sbjct: 111 DVALPRLN 118 >UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Blastopirellula marina DSM 3645|Rep: Cytochrome c oxidase subunit I - Blastopirellula marina DSM 3645 Length = 595 Score = 35.9 bits (79), Expect = 0.87 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +2 Query: 65 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 217 + Y +VT HA N L+PL++GA D+AFP +N + + Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSY 136 >UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I - Roseovarius nubinhibens ISM Length = 818 Score = 35.9 bits (79), Expect = 0.87 Identities = 22/72 (30%), Positives = 31/72 (43%) Frame = +2 Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181 G +LIRA+L P S + YN + T H L+P +LG+ Sbjct: 48 GVLAMLIRAQLATPRSAFLGPEHYNQVFTMHGTIMMFLFAIPVFEGFAVY-LLPKLLGSR 106 Query: 182 DIAFPRINNIRF 217 D+AFPR+ F Sbjct: 107 DLAFPRLTAYGF 118 >UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I; n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O ubiquinol oxidase subunit I - Carsonella ruddii (strain PV) Length = 606 Score = 35.5 bits (78), Expect = 1.1 Identities = 20/53 (37%), Positives = 28/53 (52%) Frame = +1 Query: 241 IINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 +IN I+ A TG YPPLS VD +S+ ++GI +II +IN Sbjct: 150 LINISLIIGEFAKTGWLGYPPLSEKTFSPWVGVDYWNWSIQISGIGTIISSIN 202 >UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c oxidase polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3) subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c oxidase polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum Length = 591 Score = 35.5 bits (78), Expect = 1.1 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Frame = +2 Query: 17 LIRAELGNPGSL-IGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193 L+R +LG PG+ D Y +T H N L+PL++GA D+ F Sbjct: 62 LMRLQLGFPGTFSFIDANQYLQFITMHGMIMVIYLLTALFLGGFGNYLIPLMVGARDMVF 121 Query: 194 PRINNIRF 217 P +N + + Sbjct: 122 PYVNMLSY 129 >UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1; Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III - Aeropyrum pernix Length = 815 Score = 35.5 bits (78), Expect = 1.1 Identities = 23/72 (31%), Positives = 31/72 (43%) Frame = +2 Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181 G+ LL R +L P S Y VT H N +VPL +GA Sbjct: 40 GSLALLFRVQLAIPKSNFLTGDAYYEAVTVHGLIMLLWFASPFAFGLA-NYIVPLQIGAR 98 Query: 182 DIAFPRINNIRF 217 D+AFPR+N + + Sbjct: 99 DLAFPRLNALSY 110 Score = 33.1 bits (72), Expect = 6.1 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Frame = +1 Query: 265 ENGA-GTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 E+GA G T+Y PL++ I G +DLA ++ L +S +G IN Sbjct: 127 ESGAPNVGWTLYAPLTARIYTPGIGLDLAALAIFLFSLSVTLGTIN 172 >UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; cellular organisms|Rep: Cytochrome C oxidase subunit I - Rhizobium loti (Mesorhizobium loti) Length = 623 Score = 35.1 bits (77), Expect = 1.5 Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Frame = +2 Query: 2 GTRRLLIRAELGNPGS-LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 178 G LL+R +L P + IG D+ YN I T H LVPL++G Sbjct: 48 GVLALLMRLQLAQPEARFIGPDR-YNQIFTMHGSNMMFLFAVPVMQAMAIY-LVPLMVGT 105 Query: 179 PDIAFPRIN 205 IAFPR+N Sbjct: 106 RHIAFPRLN 114 >UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase subunit I - Planctomyces maris DSM 8797 Length = 606 Score = 34.7 bits (76), Expect = 2.0 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = +2 Query: 65 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 217 + Y + T HA N L+PL++GA D+AFP++N + + Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSY 140 >UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I; n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase, subunit I - Chromobacterium violaceum Length = 680 Score = 33.5 bits (73), Expect = 4.6 Identities = 19/53 (35%), Positives = 28/53 (52%) Frame = +1 Query: 241 IINFKRIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 ++N V N A TG YPPL+ VD I++L ++GI + + AIN Sbjct: 156 LVNLSLGVGNFARTGWVAYPPLAELGFSPDVGVDYYIWALQISGIGTTLTAIN 208 >UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus flagellatus KT|Rep: Cytochrome-c oxidase - Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) Length = 631 Score = 32.7 bits (71), Expect = 8.1 Identities = 18/64 (28%), Positives = 29/64 (45%) Frame = +2 Query: 14 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 193 LL+R +L P + D + YN + + H ++PL+LG D+ F Sbjct: 59 LLMRLQLAVPENDFMDPETYNQVFSMHGITMMFLFAIPVMEGFAVY-IIPLMLGTRDMTF 117 Query: 194 PRIN 205 PR+N Sbjct: 118 PRLN 121 >UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter shibae DFL 12|Rep: Cytochrome-c oxidase - Dinoroseobacter shibae DFL 12 Length = 853 Score = 32.7 bits (71), Expect = 8.1 Identities = 19/67 (28%), Positives = 29/67 (43%) Frame = +2 Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181 G LL+R +L P + + YN + T H L+PL++GA Sbjct: 74 GVFALLVRLQLMVPENTFLSSETYNQLFTMHGTIMMFLFAIPMLEGFAVY-LIPLMIGAR 132 Query: 182 DIAFPRI 202 D+ FPR+ Sbjct: 133 DLVFPRL 139 >UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia cenocepacia MC0-3 Length = 1004 Score = 32.7 bits (71), Expect = 8.1 Identities = 19/67 (28%), Positives = 31/67 (46%) Frame = +2 Query: 2 GTRRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAP 181 G L++R +L P + + Y+++ T H N L PL+LG+ Sbjct: 68 GVEALVMRIQLARPNATVLTPAQYDSLFTMHGVTMIFLYALPVLSGFA-NYLWPLMLGSR 126 Query: 182 DIAFPRI 202 D+AFPR+ Sbjct: 127 DMAFPRL 133 >UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4; cellular organisms|Rep: Cytochrome C oxidase subunit I /III - Pyrobaculum aerophilum Length = 800 Score = 32.7 bits (71), Expect = 8.1 Identities = 17/45 (37%), Positives = 26/45 (57%) Frame = +1 Query: 265 ENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGAIN 399 ++G G T+YPPLS+ + VDL + + +AG SS + IN Sbjct: 126 QHGDSIGWTLYPPLST--ISKSIGVDLILLGIIIAGFSSTLTGIN 168 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 551,116,349 Number of Sequences: 1657284 Number of extensions: 9869386 Number of successful extensions: 21174 Number of sequences better than 10.0: 83 Number of HSP's better than 10.0 without gapping: 20120 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 21112 length of database: 575,637,011 effective HSP length: 98 effective length of database: 413,223,179 effective search space used: 50413227838 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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