Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30126
         (751 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6ET62 Cluster: Thiol:disulfide interchange protein dsb...    37   0.61 
UniRef50_Q9VFX4 Cluster: CG15888-PB; n=4; Sophophora|Rep: CG1588...    37   0.61 
UniRef50_Q8QNB6 Cluster: EsV-1-170; n=2; Ectocarpus siliculosus ...    34   4.3  
UniRef50_P94394 Cluster: YcgQ protein; n=4; Bacillaceae|Rep: Ycg...    34   4.3  
UniRef50_Q0HJ10 Cluster: UBA/THIF-type NAD/FAD binding protein; ...    33   9.9  
UniRef50_A7N6N8 Cluster: Putative uncharacterized protein; n=1; ...    33   9.9  
UniRef50_Q9VAC2 Cluster: CG7912-PA; n=3; Sophophora|Rep: CG7912-...    33   9.9  

>UniRef50_A6ET62 Cluster: Thiol:disulfide interchange protein dsbD,
           putative; n=1; unidentified eubacterium SCB49|Rep:
           Thiol:disulfide interchange protein dsbD, putative -
           unidentified eubacterium SCB49
          Length = 801

 Score = 36.7 bits (81), Expect = 0.61
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +3

Query: 306 QLCDDTKQLLQYRTMLFNVPGYKFELGSKGNGTLNIDVISNNDGESGRGM 455
           Q CDD K + +   + F +PG   ++     G  ++D I + D E  RGM
Sbjct: 279 QSCDDEKCIFEMAELEFTLPGADVKIEEATAGVSSVDTIDSEDEEESRGM 328


>UniRef50_Q9VFX4 Cluster: CG15888-PB; n=4; Sophophora|Rep:
           CG15888-PB - Drosophila melanogaster (Fruit fly)
          Length = 319

 Score = 36.7 bits (81), Expect = 0.61
 Identities = 15/40 (37%), Positives = 26/40 (65%)
 Frame = +2

Query: 509 LLMSAVLPFVLPALKMMTVAVGILNNMALTGRCFHTSQEQ 628
           +L+ ++LPF+LPALKM T+   ++NN A      + ++ Q
Sbjct: 268 VLLGSLLPFILPALKMATILSLVMNNGAFMAALLYAARTQ 307


>UniRef50_Q8QNB6 Cluster: EsV-1-170; n=2; Ectocarpus siliculosus
           virus 1|Rep: EsV-1-170 - Ectocarpus siliculosus virus 1
          Length = 383

 Score = 33.9 bits (74), Expect = 4.3
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = -3

Query: 329 LLGIVTKLRIQFIIGPILICLPRKPCISSVKLNNALLSPAKVVRAFS-ARHRLNAFK-HV 156
           +LG+  +L   FI G   +CL   P +S +K+     S  +V  +F   +  L   K H 
Sbjct: 217 ILGVKARLLKYFIDGKTYVCLTTDPSLSRLKIKTMYASRWRVEESFKRLKSNLRLEKAHA 276

Query: 155 RTPSSRVQ 132
           RTP   +Q
Sbjct: 277 RTPDLYIQ 284


>UniRef50_P94394 Cluster: YcgQ protein; n=4; Bacillaceae|Rep: YcgQ
           protein - Bacillus subtilis
          Length = 285

 Score = 33.9 bits (74), Expect = 4.3
 Identities = 21/62 (33%), Positives = 34/62 (54%)
 Frame = -1

Query: 739 IVVHVMFWF*IYFWHASRSW*PSLTYKTLCSYLSLNALFLRSVKTAPS*CHIIQNPDSNG 560
           ++V + F F  Y  HAS +    +  K   +YLS  A+FL ++ TA      I++P+ +G
Sbjct: 4   LLVLMGFTFFFYHLHASGNLTKYINMKY--AYLSFIAIFLLAILTAVQAYLFIKSPEKSG 61

Query: 559 HH 554
           HH
Sbjct: 62  HH 63


>UniRef50_Q0HJ10 Cluster: UBA/THIF-type NAD/FAD binding protein;
           n=11; Shewanella|Rep: UBA/THIF-type NAD/FAD binding
           protein - Shewanella sp. (strain MR-4)
          Length = 339

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 4/112 (3%)
 Frame = +1

Query: 16  ILILAWSCRVRAFQQTITSRVLHSIVGD--ATNTPVQRVLDCTRELGVRTCLNAFSLWRA 189
           + +LA  C + AF + +T     ++     A     + VLDCT  L  R C+N   +  A
Sbjct: 101 LAVLAQGCEIDAFAERLTLESASAVFARLLAHGDETRLVLDCTDNLAARHCINRLCIEYA 160

Query: 190 EKALT-TFAGDNNALFNLTEDIQGFLGRHIRIGPMMNCIRNFVT-IPSNCCS 339
              ++ + A  N  LF +  D Q F      +G   +CI    T  P NC S
Sbjct: 161 LPLVSASIATFNGQLFAV--DQQRF-----PMGGCYHCIFPSKTRAPQNCSS 205


>UniRef50_A7N6N8 Cluster: Putative uncharacterized protein; n=1;
           Vibrio harveyi ATCC BAA-1116|Rep: Putative
           uncharacterized protein - Vibrio harveyi ATCC BAA-1116
          Length = 669

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 22/87 (25%), Positives = 40/87 (45%)
 Frame = +3

Query: 240 DRGYTGFSWKAYKNWSDDELYSQLCDDTKQLLQYRTMLFNVPGYKFELGSKGNGTLNIDV 419
           +RG    +W   K       YS+   ++    +   + FN   Y+F LGSKG    +I  
Sbjct: 576 ERGPRPKAWDDLKPVVLKSSYSKAIAESFYSAEKDELPFNWYSYRF-LGSKGKPVSHIRA 634

Query: 420 ISNNDGESGRGMKKMQKTFYKIVPFLL 500
           +   D ESG    K+ ++F +++  ++
Sbjct: 635 LEEIDFESGENKDKIPESFQEMIKHII 661


>UniRef50_Q9VAC2 Cluster: CG7912-PA; n=3; Sophophora|Rep: CG7912-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 602

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
 Frame = +1

Query: 196 ALTTFAGDNNALFNLTEDIQGFLGRHIR-IGPMMNCIRNFVTIPSNCCSIVLCYLMFPAT 372
           ALT   G  N+LF ++    GFL   I   G +    RN   +   CC++VL  LM    
Sbjct: 165 ALTIATGQVNSLFGISSSASGFLNSWIYFFGHITQTRRNDAIL--GCCTLVLLLLMRQLK 222

Query: 373 SLSWDQKA 396
           +L++  K+
Sbjct: 223 NLTFGFKS 230


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 751,122,370
Number of Sequences: 1657284
Number of extensions: 15949486
Number of successful extensions: 42304
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 40600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42297
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)