Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0114
         (499 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6NIM4 Cluster: Uncharacterized protein FAT3; n=43; Eut...    37   0.29 
UniRef50_Q6EWN0 Cluster: Forkhead foxD; n=1; Suberites domuncula...    36   0.51 
UniRef50_Q2HQX0 Cluster: AraC1 protein; n=2; Photobacterium|Rep:...    36   0.67 
UniRef50_Q1D2F5 Cluster: Putative lipoprotein; n=1; Myxococcus x...    35   0.88 
UniRef50_A6CR92 Cluster: Adaptor protein; n=1; Bacillus sp. SG-1...    35   1.2  
UniRef50_A7EP32 Cluster: Putative uncharacterized protein; n=4; ...    33   3.6  
UniRef50_A4JFI6 Cluster: Putative uncharacterized protein; n=1; ...    33   4.7  
UniRef50_A6QNT4 Cluster: FAM120B protein; n=3; Laurasiatheria|Re...    33   4.7  
UniRef50_Q9LQ50 Cluster: T30E16.23; n=2; Arabidopsis thaliana|Re...    32   6.2  
UniRef50_Q22KQ6 Cluster: Formin Homology 2 Domain containing pro...    32   6.2  
UniRef50_O00159 Cluster: Myosin-Ic; n=144; root|Rep: Myosin-Ic -...    32   6.2  
UniRef50_Q822Y4 Cluster: Probable O-sialoglycoprotein endopeptid...    32   6.2  
UniRef50_Q4SCL8 Cluster: Chromosome 12 SCAF14652, whole genome s...    32   8.2  

>UniRef50_A6NIM4 Cluster: Uncharacterized protein FAT3; n=43;
            Euteleostomi|Rep: Uncharacterized protein FAT3 - Homo
            sapiens (Human)
          Length = 4558

 Score = 36.7 bits (81), Expect = 0.29
 Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
 Frame = +3

Query: 240  LHSCCGCRKPKIPGNALECHEYIEDENVEFPTCCARLRCVVEVNGERIVQTRGQPC---E 410
            L  C G       GN+   +   E+   E      RLR  ++ NG  I+ TR  PC   +
Sbjct: 3830 LGECSGHTSLSFAGNSYIKYRLSENSKEEDFKLALRLR-TLQSNGI-IMYTRANPCIILK 3887

Query: 411  LFPGKPWEGQQNGPNPGVVGISG 479
            +  GK W     G  PG++GISG
Sbjct: 3888 IVDGKLWFQLDCGSGPGILGISG 3910


>UniRef50_Q6EWN0 Cluster: Forkhead foxD; n=1; Suberites
           domuncula|Rep: Forkhead foxD - Suberites domuncula
           (Sponge)
          Length = 444

 Score = 35.9 bits (79), Expect = 0.51
 Identities = 25/75 (33%), Positives = 34/75 (45%)
 Frame = -1

Query: 478 PLIPTTPGFGPFCCPSHGLPGNSSQGCPLVCTILSPFTSTTQRNRAQHVGNSTFSSSMYS 299
           PL P TP   P    +   PG  + G P+    ++P T    R  A   GN T SS M +
Sbjct: 318 PLTPITPSHMPSTPVTPVTPGLVTPGTPVTPGPITPVTPGDGRQGA--YGNGT-SSPMDT 374

Query: 298 WHSSAFPGIFGFRHP 254
           +HS   P  F + +P
Sbjct: 375 YHSGTSPQTFTYMYP 389


>UniRef50_Q2HQX0 Cluster: AraC1 protein; n=2; Photobacterium|Rep:
           AraC1 protein - Pasteurella piscicida (Photobacterium
           damsela subsp. piscicida)
          Length = 327

 Score = 35.5 bits (78), Expect = 0.67
 Identities = 25/61 (40%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = +3

Query: 249 CCGCRKPKIPGNALECHEYIEDENVEFPTCCARLRCVVEVNGERIVQTRG--QPCELFPG 422
           C GC+   + G    C  Y  D   E PTCC R+  V  V+GER++   G  QP EL  G
Sbjct: 39  CLGCQIHTLSGYG-GCTAY--DAQPEKPTCCLRILTV--VHGERLLWHNGQDQPLELERG 93

Query: 423 K 425
           K
Sbjct: 94  K 94


>UniRef50_Q1D2F5 Cluster: Putative lipoprotein; n=1; Myxococcus
           xanthus DK 1622|Rep: Putative lipoprotein - Myxococcus
           xanthus (strain DK 1622)
          Length = 558

 Score = 35.1 bits (77), Expect = 0.88
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = +1

Query: 94  LVLPALSAEDVSYQACVDKYSRKGYQPWQEWSDHY-TCHRY-RCEIRDGKYFIAAVDVEN 267
           +V PAL+A      +CV+ Y   G   W  WS+ + TC  Y   E+ DG  F+ AV VE+
Sbjct: 72  VVSPALAAS----LSCVETYVNAGTCDWAHWSEMWETCETYEHPELEDG-VFLEAVQVED 126


>UniRef50_A6CR92 Cluster: Adaptor protein; n=1; Bacillus sp.
           SG-1|Rep: Adaptor protein - Bacillus sp. SG-1
          Length = 184

 Score = 34.7 bits (76), Expect = 1.2
 Identities = 20/72 (27%), Positives = 33/72 (45%)
 Frame = +1

Query: 100 LPALSAEDVSYQACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKYFIAAVDVENQKYR 279
           L  LS+  V +   +D+   KG     +W D    H +  E+ D  Y    +D+E+    
Sbjct: 3   LERLSSNTVKFSISIDELETKGILKDDQWRDSLVWHEFFEELMDEMYSEYGIDLESTVTV 62

Query: 280 ETHWNATNTSKM 315
           E   N+ N+S+M
Sbjct: 63  EI--NSVNSSEM 72


>UniRef50_A7EP32 Cluster: Putative uncharacterized protein; n=4;
            Sclerotinia sclerotiorum 1980|Rep: Putative
            uncharacterized protein - Sclerotinia sclerotiorum 1980
          Length = 1056

 Score = 33.1 bits (72), Expect = 3.6
 Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
 Frame = -2

Query: 471  SRQHQDLARFVAPPMVYRGTVRKVA-LWF-ALFSPHLLRRRNAI-AHSTWGIRHSHLRCI 301
            ++Q+++  ++  PP+   G +R V  +W  +  +P  +  ++A+ AH   G+R +HLR  
Sbjct: 826  AQQNKEGVKWPEPPVTVDGLIRVVGKIWLPSSIAPEFIEEQHALPAHGHQGVRRTHLRIK 885

Query: 300  R 298
            R
Sbjct: 886  R 886


>UniRef50_A4JFI6 Cluster: Putative uncharacterized protein; n=1;
           Burkholderia vietnamiensis G4|Rep: Putative
           uncharacterized protein - Burkholderia vietnamiensis
           (strain G4 / LMG 22486) (Burkholderiacepacia (strain
           R1808))
          Length = 550

 Score = 32.7 bits (71), Expect = 4.7
 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = -2

Query: 441 VAPPMVYRGTVRKVALWFALFSPHLLRRRNAIAHSTWGIR-HSHLRCIRGIP 289
           ++PP  Y G  R   LW   F P     RNA+    W I  +S+  C   +P
Sbjct: 364 LSPPAYYAGVYRPAGLWVLDFQPAARVERNALISGAWFIPFYSNRSCSALMP 415


>UniRef50_A6QNT4 Cluster: FAM120B protein; n=3; Laurasiatheria|Rep:
           FAM120B protein - Bos taurus (Bovine)
          Length = 700

 Score = 32.7 bits (71), Expect = 4.7
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = -1

Query: 427 GLPGNSSQGCPLVCTILSPFTSTTQRNRAQHVGNS 323
           GL G  +  CP VCT+++ F    +R+R+QH G +
Sbjct: 5   GLHGFVASSCPHVCTVVN-FKELAERHRSQHPGGT 38


>UniRef50_Q9LQ50 Cluster: T30E16.23; n=2; Arabidopsis thaliana|Rep:
           T30E16.23 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 1076

 Score = 32.3 bits (70), Expect = 6.2
 Identities = 21/53 (39%), Positives = 26/53 (49%)
 Frame = -1

Query: 466 TTPGFGPFCCPSHGLPGNSSQGCPLVCTILSPFTSTTQRNRAQHVGNSTFSSS 308
           +TP FG    P  G      +   L     SPF STTQ+++    GNSTF SS
Sbjct: 108 STPSFGSSNSPFGGTSTFGQKSFGLSTPQSSPFGSTTQQSQPA-FGNSTFGSS 159


>UniRef50_Q22KQ6 Cluster: Formin Homology 2 Domain containing
           protein; n=2; Tetrahymena thermophila|Rep: Formin
           Homology 2 Domain containing protein - Tetrahymena
           thermophila SB210
          Length = 1369

 Score = 32.3 bits (70), Expect = 6.2
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 481 IPLIPTTPGFGPFCCPSHGLPGNSSQGCPLVCTILSP 371
           IP +P+ PGFG    PS  +PG      P++  +++P
Sbjct: 840 IPSVPSLPGFGAPAAPSLNIPGAPIAMAPILPGLMAP 876


>UniRef50_O00159 Cluster: Myosin-Ic; n=144; root|Rep: Myosin-Ic -
           Homo sapiens (Human)
          Length = 1028

 Score = 32.3 bits (70), Expect = 6.2
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +1

Query: 97  VLPALSAEDVSYQACVDKYSRKGYQP 174
           VL AL +E + Y   V KY RKGY+P
Sbjct: 875 VLQALGSEPIQYAVPVVKYDRKGYKP 900


>UniRef50_Q822Y4 Cluster: Probable O-sialoglycoprotein
           endopeptidase; n=7; Chlamydiaceae|Rep: Probable
           O-sialoglycoprotein endopeptidase - Chlamydophila caviae
          Length = 344

 Score = 32.3 bits (70), Expect = 6.2
 Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
 Frame = +3

Query: 255 GCRKPKIPGNALECH---EYIEDENVEFP 332
           GC+KP I  N +E H    Y+E ENVEFP
Sbjct: 100 GCQKPIIGVNHVEAHLYAAYMEAENVEFP 128


>UniRef50_Q4SCL8 Cluster: Chromosome 12 SCAF14652, whole genome
           shotgun sequence; n=4; Euteleostomi|Rep: Chromosome 12
           SCAF14652, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 658

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 24/91 (26%), Positives = 34/91 (37%), Gaps = 2/91 (2%)
 Frame = +1

Query: 22  LVTMAGVLRIQHGKQLGALFMLCCLVLPALSAEDVSYQACV--DKYSRKGYQPWQEWSDH 195
           L+ +A  L + H   L  L+ +  L   A+   D      V  D     G Q    W  H
Sbjct: 512 LIVLANRLCLPHLVALTELYTVTVLTEAAMMGTDTDGDVLVYLDMAQFHGAQQLTGWCLH 571

Query: 196 YTCHRYRCEIRDGKYFIAAVDVENQKYRETH 288
           + C  Y    R     + A   +NQ+Y E H
Sbjct: 572 HICTNYNSICRKFPRDMKAKSADNQEYFEKH 602


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 561,016,603
Number of Sequences: 1657284
Number of extensions: 12057082
Number of successful extensions: 36475
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 35046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36442
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)