Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0112
         (598 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q25490 Cluster: Apolipophorins precursor [Contains: Apo...   102   7e-21
UniRef50_A0BLF2 Cluster: Chromosome undetermined scaffold_114, w...    37   0.31 
UniRef50_Q2Y6G5 Cluster: D-alanyl-D-alanine carboxypeptidase/D-a...    35   1.7  

>UniRef50_Q25490 Cluster: Apolipophorins precursor [Contains:
            Apolipophorin-2 (Apolipophorin II) (apoLp-2);
            Apolipophorin-1 (Apolipophorin I) (apoLp-1)]; n=5;
            Ditrysia|Rep: Apolipophorins precursor [Contains:
            Apolipophorin-2 (Apolipophorin II) (apoLp-2);
            Apolipophorin-1 (Apolipophorin I) (apoLp-1)] - Manduca
            sexta (Tobacco hawkmoth) (Tobacco hornworm)
          Length = 3305

 Score =  102 bits (244), Expect = 7e-21
 Identities = 44/83 (53%), Positives = 61/83 (73%)
 Frame = +2

Query: 5    TVTYPTSSDSPYIFSGEACLDLDKKKQGHKTSVRYLINISNNRNQEAIAAEIGFFHPRLD 184
            T+T+PTS D P+   GEACLDLDK + GHKTS R+L++ SN+ +++   AEIGFFHP+++
Sbjct: 2157 TLTHPTSQDLPFPIKGEACLDLDKNRPGHKTSARFLVDYSNSGSEDKAVAEIGFFHPKIE 2216

Query: 185  KEVVIKSNAVFKVPEPNRYILES 253
            KE VI+ NA  K PE   + +ES
Sbjct: 2217 KEAVIRLNAFMKRPENGCFKIES 2239



 Score = 74.1 bits (174), Expect = 2e-12
 Identities = 43/110 (39%), Positives = 65/110 (59%)
 Frame = +1

Query: 259  SLCHSSLGADRXSKLLLDVSPTKFVFLAQTPFVKVIDLEGTVDVQSKAKTQQAKLRFKLL 438
            SLCHS+LG DR +K++ + +P    FLA TPFVK ID+EG+ +V  + +TQQ   R  LL
Sbjct: 2242 SLCHSALGTDRVAKVMFETTPNSVKFLADTPFVKAIDVEGSFNVNQQQRTQQCLFRICLL 2301

Query: 439  EGQGGQRPXSGRKTXQYFXVHHSRRQNRQTLLFVXVIWVPXKXEXDITAD 588
            EG+  Q   +  K  QY+    +  ++ + L +V  + +P K   DI+ D
Sbjct: 2302 EGKPVQM-SALVKDYQYY--EFTTEESNRKLSYVGHL-IPEK-RVDISTD 2346


>UniRef50_A0BLF2 Cluster: Chromosome undetermined scaffold_114,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_114,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 757

 Score = 37.1 bits (82), Expect = 0.31
 Identities = 21/65 (32%), Positives = 33/65 (50%)
 Frame = +1

Query: 325 KFVFLAQTPFVKVIDLEGTVDVQSKAKTQQAKLRFKLLEGQGGQRPXSGRKTXQYFXVHH 504
           K V+  Q PF  +ID +   +++   KTQ   +   LL GQ  Q+  +G    QYF + +
Sbjct: 626 KAVYPVQLPFESLIDQQSYTNIKELRKTQIDPINISLLGGQQNQQSVAG----QYFQIRN 681

Query: 505 SRRQN 519
           S R +
Sbjct: 682 SLRSD 686


>UniRef50_Q2Y6G5 Cluster: D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           precursor; n=1; Nitrosospira multiformis ATCC 25196|Rep:
           D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           precursor - Nitrosospira multiformis (strain ATCC 25196
           / NCIMB 11849)
          Length = 548

 Score = 34.7 bits (76), Expect = 1.7
 Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
 Frame = +1

Query: 277 LGADRXSKLLLDVSPTKFV--FLAQTPFVKVIDLEGTVD--VQSKAKTQQAKLRFKLLEG 444
           + A    KLLL    +  +  F++  P V V   +GT+   +   A   QA ++  LLEG
Sbjct: 447 ISAGHMGKLLLAAFQSHVMPEFVSSLPIVAV---DGTMKKRLNRSAIAGQAHIKTGLLEG 503

Query: 445 ----QGGQRPXSGRKTXQYFXVHHSRRQNRQTLLFVXVIWV 555
                G  R  SGR++   F ++H R +N Q  +   + WV
Sbjct: 504 VKTIAGYVRDKSGRRSVVVFFINHPRAENGQAAMDALLDWV 544


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 575,556,721
Number of Sequences: 1657284
Number of extensions: 11021659
Number of successful extensions: 26561
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26558
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)