Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0220.Seq
(903 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 124 2e-27
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 105 2e-21
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 104 4e-21
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 101 2e-20
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 100 6e-20
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 99 8e-20
UniRef50_Q4TEE5 Cluster: Chromosome undetermined SCAF5464, whole... 89 1e-16
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ... 88 3e-16
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 87 8e-16
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 86 1e-15
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 85 2e-15
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 84 5e-15
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 80 7e-14
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 79 2e-13
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 79 2e-13
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 76 1e-12
UniRef50_Q17BQ3 Cluster: Putative uncharacterized protein; n=1; ... 72 2e-11
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 71 3e-11
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 71 4e-11
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 70 7e-11
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 69 2e-10
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 69 2e-10
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 68 3e-10
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 68 4e-10
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 67 7e-10
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 67 7e-10
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom... 66 9e-10
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 66 9e-10
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 66 9e-10
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ... 65 3e-09
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 64 4e-09
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 64 5e-09
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 63 8e-09
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 63 8e-09
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 63 1e-08
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 62 2e-08
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 61 4e-08
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 61 4e-08
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 61 4e-08
UniRef50_UPI0000E47F75 Cluster: PREDICTED: similar to DEAD (Asp-... 60 6e-08
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 60 6e-08
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 60 6e-08
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 60 8e-08
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 60 1e-07
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 60 1e-07
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 59 1e-07
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 59 1e-07
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 59 2e-07
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 58 3e-07
UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX... 58 3e-07
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 58 3e-07
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 58 4e-07
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 58 4e-07
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 56 1e-06
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 56 1e-06
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 56 1e-06
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 56 2e-06
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 56 2e-06
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 56 2e-06
UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1; Ostreo... 55 3e-06
UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family pr... 54 4e-06
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 54 4e-06
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 54 5e-06
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 54 5e-06
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 54 7e-06
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 53 9e-06
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 53 9e-06
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 53 9e-06
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 53 9e-06
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 53 1e-05
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 53 1e-05
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 53 1e-05
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 53 1e-05
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 52 2e-05
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 52 2e-05
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 52 2e-05
UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 52 2e-05
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 52 2e-05
UniRef50_Q803D3 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 51 4e-05
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 51 4e-05
UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA hel... 51 5e-05
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 51 5e-05
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 50 6e-05
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 50 6e-05
UniRef50_Q9W3Y5 Cluster: Putative ATP-dependent RNA helicase CG1... 50 6e-05
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 50 8e-05
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 50 8e-05
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 50 8e-05
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 50 1e-04
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 50 1e-04
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 50 1e-04
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 50 1e-04
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 49 1e-04
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 49 1e-04
UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helic... 49 2e-04
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 49 2e-04
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 49 2e-04
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 48 2e-04
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 48 3e-04
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 48 3e-04
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 48 3e-04
UniRef50_Q240I5 Cluster: DEAD/DEAH box helicase family protein; ... 48 4e-04
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 47 6e-04
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 47 6e-04
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 47 8e-04
UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 47 8e-04
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 46 0.001
UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n... 46 0.001
UniRef50_A2D755 Cluster: DEAD/DEAH box helicase family protein; ... 46 0.001
UniRef50_P23394 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 46 0.001
UniRef50_UPI0000E48927 Cluster: PREDICTED: similar to DEAD box A... 46 0.001
UniRef50_Q00YB7 Cluster: RNA helicase, DRH1; n=1; Ostreococcus t... 46 0.001
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 46 0.002
UniRef50_Q752X1 Cluster: AFR452Cp; n=1; Eremothecium gossypii|Re... 46 0.002
UniRef50_UPI0000498E70 Cluster: DEAD/DEAH box helicase; n=1; Ent... 45 0.002
UniRef50_Q8AYI1 Cluster: Vasa-like protein; n=1; Squalus acanthi... 45 0.002
UniRef50_Q4SWK6 Cluster: Chromosome 12 SCAF13614, whole genome s... 45 0.002
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 45 0.002
UniRef50_Q23WN3 Cluster: Helicase conserved C-terminal domain co... 45 0.003
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh... 45 0.003
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 45 0.003
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 45 0.003
UniRef50_A2YDM1 Cluster: Putative uncharacterized protein; n=2; ... 44 0.004
UniRef50_Q6CDS6 Cluster: ATP-dependent RNA helicase ROK1; n=1; Y... 44 0.004
UniRef50_Q4UDY7 Cluster: RNA helicase, putative; n=2; Theileria|... 44 0.005
UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;... 44 0.005
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 44 0.005
UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2; ... 44 0.007
UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 44 0.007
UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium ... 43 0.009
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 43 0.009
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 43 0.009
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 43 0.009
UniRef50_Q84TG1 Cluster: DEAD-box ATP-dependent RNA helicase 57;... 43 0.009
UniRef50_Q86B47 Cluster: CG8611-PB, isoform B; n=2; Drosophila m... 43 0.012
UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. ... 43 0.012
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 43 0.012
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 42 0.016
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 42 0.016
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 42 0.022
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 42 0.022
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 42 0.028
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p... 42 0.028
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 42 0.028
UniRef50_Q7R388 Cluster: GLP_111_80478_82724; n=1; Giardia lambl... 42 0.028
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 42 0.028
UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 42 0.028
UniRef50_UPI0000E497AE Cluster: PREDICTED: similar to AFL221Cp, ... 41 0.038
UniRef50_Q16KK0 Cluster: DEAD box ATP-dependent RNA helicase; n=... 41 0.038
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w... 41 0.038
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 41 0.050
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 41 0.050
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 41 0.050
UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7; ... 41 0.050
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 41 0.050
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 40 0.066
UniRef50_A7SJ72 Cluster: Predicted protein; n=1; Nematostella ve... 40 0.066
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 40 0.066
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 40 0.066
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 40 0.066
UniRef50_Q5KMS9 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 40 0.066
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 40 0.087
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 40 0.087
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 40 0.087
UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11; Plasmodium|... 40 0.087
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 40 0.087
UniRef50_Q9H8H2 Cluster: Probable ATP-dependent RNA helicase DDX... 40 0.087
UniRef50_UPI0000E49D13 Cluster: PREDICTED: similar to DEAD (Asp-... 40 0.11
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 40 0.11
UniRef50_Q5ENJ0 Cluster: Chloroplast RNA helicase; n=1; Heteroca... 40 0.11
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 40 0.11
UniRef50_A0DK92 Cluster: Chromosome undetermined scaffold_54, wh... 40 0.11
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 40 0.11
UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2; F... 40 0.11
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 39 0.15
UniRef50_Q16YP8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 39 0.15
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 39 0.15
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 39 0.15
UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 39 0.15
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 39 0.20
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 39 0.20
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 39 0.20
UniRef50_Q013Q9 Cluster: DEAD/DEAH box helicase, putative; n=7; ... 39 0.20
UniRef50_Q5CWD0 Cluster: Prp5p C terminal KH. eIF4A-1-family RNA... 39 0.20
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 39 0.20
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 39 0.20
UniRef50_A7T4Z6 Cluster: Predicted protein; n=1; Nematostella ve... 39 0.20
UniRef50_A2DGJ7 Cluster: DEAD/DEAH box helicase family protein; ... 39 0.20
UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, wh... 39 0.20
UniRef50_Q0CX32 Cluster: DEAD-box protein 3; n=11; Pezizomycotin... 39 0.20
UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1; ... 39 0.20
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 39 0.20
UniRef50_UPI0000E49031 Cluster: PREDICTED: similar to DEAD/DEXH ... 38 0.27
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 38 0.27
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 38 0.27
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 38 0.27
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 38 0.27
UniRef50_Q6MN90 Cluster: RNA helicase; n=1; Bdellovibrio bacteri... 38 0.35
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 38 0.35
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 38 0.35
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 38 0.35
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 38 0.35
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 38 0.35
UniRef50_A5B2H1 Cluster: Putative uncharacterized protein; n=1; ... 38 0.35
UniRef50_Q5C221 Cluster: SJCHGC04124 protein; n=1; Schistosoma j... 38 0.35
UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5; T... 38 0.35
UniRef50_Q4DJM0 Cluster: ATP-dependent RNA helicase, putative; n... 38 0.35
UniRef50_Q5KC99 Cluster: ATP-dependent RNA helicase MAK5; n=2; F... 38 0.35
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U... 38 0.35
UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p; ... 38 0.46
UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; ... 38 0.46
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 38 0.46
UniRef50_Q3LWF0 Cluster: ATP-dependent RNA helicase; n=1; Bigelo... 38 0.46
UniRef50_A7PDS5 Cluster: Chromosome chr11 scaffold_13, whole gen... 38 0.46
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 38 0.46
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 38 0.46
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 38 0.46
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 38 0.46
UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.46
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 38 0.46
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 38 0.46
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 38 0.46
UniRef50_Q7XJN0 Cluster: DEAD-box ATP-dependent RNA helicase 17;... 38 0.46
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 38 0.46
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 37 0.61
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 37 0.61
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 37 0.61
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 37 0.61
UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14; Eume... 37 0.61
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 37 0.61
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 37 0.61
UniRef50_Q5CL10 Cluster: DEAD/H (Asp-Glu-Ala-Asp/His) box polype... 37 0.61
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 37 0.61
UniRef50_A7AU12 Cluster: Putative uncharacterized protein; n=1; ... 37 0.61
UniRef50_P45818 Cluster: ATP-dependent RNA helicase ROK1; n=11; ... 37 0.61
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 37 0.61
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 37 0.81
UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family pr... 37 0.81
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 37 0.81
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 37 0.81
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 37 0.81
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 37 0.81
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 37 0.81
UniRef50_Q5BYX8 Cluster: SJCHGC04912 protein; n=1; Schistosoma j... 37 0.81
UniRef50_Q234J0 Cluster: DEAD/DEAH box helicase family protein; ... 37 0.81
UniRef50_A5K7L1 Cluster: ATP-dependent RNA Helicase, putative; n... 37 0.81
UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicas... 37 0.81
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 37 0.81
UniRef50_A2E9Y0 Cluster: DEAD/DEAH box helicase family protein; ... 37 0.81
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 37 0.81
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 37 0.81
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 37 0.81
UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1; P... 37 0.81
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 36 1.1
UniRef50_Q97PV7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 36 1.1
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 36 1.1
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 36 1.1
UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128, ... 36 1.1
UniRef50_Q9GV07 Cluster: Vasa-related protein PlVAS1; n=1; Duges... 36 1.1
UniRef50_Q54DV7 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 36 1.1
UniRef50_A7RKF5 Cluster: Predicted protein; n=1; Nematostella ve... 36 1.1
UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2; ... 36 1.1
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 36 1.1
UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;... 36 1.4
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 36 1.4
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 36 1.4
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 36 1.4
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 36 1.4
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein; ... 36 1.4
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 36 1.4
UniRef50_Q57TW7 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 36 1.4
UniRef50_Q4QJE3 Cluster: ATP-dependent RNA helicase, putative; n... 36 1.4
UniRef50_Q17CR5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 36 1.4
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 36 1.4
UniRef50_A2EPC6 Cluster: Type III restriction enzyme, res subuni... 36 1.4
UniRef50_A2E0F8 Cluster: DEAD/DEAH box helicase family protein; ... 36 1.4
UniRef50_A2DHK0 Cluster: DEAD/DEAH box helicase family protein; ... 36 1.4
UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia girella... 36 1.4
UniRef50_Q0U210 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_P52271 Cluster: Probable ATP-dependent RNA helicase MG3... 36 1.4
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 36 1.4
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 36 1.4
UniRef50_Q6C835 Cluster: ATP-dependent RNA helicase DBP7; n=1; Y... 36 1.4
UniRef50_Q9UTP9 Cluster: ATP-dependent RNA helicase dbp4; n=1; S... 36 1.4
UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;... 36 1.4
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 36 1.4
UniRef50_UPI00015B6103 Cluster: PREDICTED: similar to CG8611-PB;... 36 1.9
UniRef50_UPI0000D57716 Cluster: PREDICTED: similar to CG9143-PA;... 36 1.9
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 36 1.9
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 36 1.9
UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and ... 36 1.9
UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=... 36 1.9
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 36 1.9
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 36 1.9
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 36 1.9
UniRef50_A7P0R7 Cluster: Chromosome chr19 scaffold_4, whole geno... 36 1.9
UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Re... 36 1.9
UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n... 36 1.9
UniRef50_Q8SRN8 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Enceph... 36 1.9
UniRef50_Q8NJW1 Cluster: CYT-19 DEAD-box protein precursor; n=1;... 36 1.9
UniRef50_Q4PI21 Cluster: Putative uncharacterized protein; n=1; ... 36 1.9
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 36 1.9
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 36 1.9
UniRef50_Q9FFT9 Cluster: Probable DEAD-box ATP-dependent RNA hel... 36 1.9
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 36 1.9
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 36 1.9
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 36 1.9
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 36 1.9
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 36 1.9
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 35 2.5
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 35 2.5
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 35 2.5
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 35 2.5
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 35 2.5
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 35 2.5
UniRef50_Q9AW05 Cluster: DEAD box protein; n=1; Guillardia theta... 35 2.5
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 35 2.5
UniRef50_Q00GM9 Cluster: Plastid RNA helicase VDL protein; n=1; ... 35 2.5
UniRef50_A7RQ16 Cluster: Predicted protein; n=1; Nematostella ve... 35 2.5
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 35 2.5
UniRef50_Q1E273 Cluster: Putative uncharacterized protein; n=2; ... 35 2.5
UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3; ... 35 2.5
UniRef50_A2R3A8 Cluster: Contig An14c0130, complete genome; n=1;... 35 2.5
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 35 2.5
UniRef50_Q9SW44 Cluster: DEAD-box ATP-dependent RNA helicase 16;... 35 2.5
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 35 2.5
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 35 2.5
UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX... 35 2.5
UniRef50_UPI0000E4A27C Cluster: PREDICTED: similar to ATP-depend... 35 3.3
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 35 3.3
UniRef50_UPI0000498886 Cluster: DEAD/DEAH box helicase; n=1; Ent... 35 3.3
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 35 3.3
UniRef50_Q7NMP1 Cluster: Glr0724 protein; n=1; Gloeobacter viola... 35 3.3
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 35 3.3
UniRef50_Q6YQC2 Cluster: Superfamily II DNA and RNA helicase; n=... 35 3.3
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 35 3.3
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 35 3.3
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 35 3.3
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 35 3.3
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 35 3.3
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 35 3.3
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 35 3.3
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 35 3.3
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 35 3.3
UniRef50_Q01C55 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 35 3.3
UniRef50_A7U5W8 Cluster: DEAD-box helicase 5; n=6; Plasmodium|Re... 35 3.3
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 35 3.3
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 35 3.3
UniRef50_A6RSH5 Cluster: Putative uncharacterized protein; n=2; ... 35 3.3
UniRef50_Q0D622 Cluster: DEAD-box ATP-dependent RNA helicase 32;... 35 3.3
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 35 3.3
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 35 3.3
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 35 3.3
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 34 4.3
UniRef50_UPI000150A2B2 Cluster: hypothetical protein TTHERM_0015... 34 4.3
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 34 4.3
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 34 4.3
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 34 4.3
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 34 4.3
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 34 4.3
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 34 4.3
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 34 4.3
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 34 4.3
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 34 4.3
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 34 4.3
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 34 4.3
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 34 4.3
UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5; Tr... 34 4.3
UniRef50_A5DIX5 Cluster: ATP-dependent RNA helicase ROK1; n=2; P... 34 4.3
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 34 4.3
UniRef50_Q93Y39 Cluster: DEAD-box ATP-dependent RNA helicase 13;... 34 4.3
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 34 4.3
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 34 5.7
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 34 5.7
UniRef50_UPI0000D55FA1 Cluster: PREDICTED: similar to CG3561-PA;... 34 5.7
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 34 5.7
UniRef50_UPI00006CB2CD Cluster: DEAD/DEAH box helicase family pr... 34 5.7
UniRef50_Q9RXH8 Cluster: ATP-dependent RNA helicase, putative; n... 34 5.7
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 34 5.7
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 34 5.7
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 34 5.7
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 34 5.7
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 34 5.7
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 34 5.7
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 34 5.7
UniRef50_Q9VVK8 Cluster: CG5589-PA; n=12; Eumetazoa|Rep: CG5589-... 34 5.7
UniRef50_Q7R3Q4 Cluster: GLP_39_15741_13471; n=1; Giardia lambli... 34 5.7
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 34 5.7
UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase... 34 5.7
UniRef50_Q581A3 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 34 5.7
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 34 5.7
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 34 5.7
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 34 5.7
UniRef50_Q5KDK3 Cluster: ATP-dependent RNA helicase ROK1; n=2; F... 34 5.7
UniRef50_Q0UG00 Cluster: ATP-dependent RNA helicase MSS116, mito... 34 5.7
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 34 5.7
UniRef50_P36120 Cluster: ATP-dependent RNA helicase DBP7; n=5; S... 34 5.7
UniRef50_A5DAR2 Cluster: ATP-dependent RNA helicase DBP7; n=2; P... 34 5.7
UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1; F... 34 5.7
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 33 7.5
UniRef50_Q8YX21 Cluster: Alr1397 protein; n=1; Nostoc sp. PCC 71... 33 7.5
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 33 7.5
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 33 7.5
UniRef50_Q8EUW5 Cluster: ATP-dependent RNA helicase; n=1; Mycopl... 33 7.5
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 33 7.5
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 33 7.5
UniRef50_Q1WSN6 Cluster: ATP-dependent RNA helicase; n=1; Lactob... 33 7.5
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 33 7.5
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 33 7.5
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 33 7.5
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 33 7.5
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 33 7.5
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 33 7.5
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 33 7.5
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putativ... 33 7.5
UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=... 33 7.5
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 33 7.5
UniRef50_Q4P559 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_O74764 Cluster: ATP-dependent rRNA helicase spb4; n=1; ... 33 7.5
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 33 7.5
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 33 7.5
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 33 7.5
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 33 7.5
UniRef50_Q4IBS2 Cluster: ATP-dependent RNA helicase MAK5; n=2; S... 33 7.5
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 33 7.5
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 33 7.5
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 33 7.5
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 33 7.5
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 33 10.0
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 33 10.0
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 33 10.0
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 33 10.0
UniRef50_Q5FLC8 Cluster: ATP-dependent RNA helicase, DEAD-DEAH b... 33 10.0
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 33 10.0
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 33 10.0
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 33 10.0
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 33 10.0
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 33 10.0
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 33 10.0
UniRef50_Q9AW79 Cluster: Putative RNA-dependent helicase; n=1; G... 33 10.0
UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 - Lei... 33 10.0
UniRef50_Q55CN3 Cluster: Putative uncharacterized protein; n=1; ... 33 10.0
UniRef50_A7AR78 Cluster: DEAD box RNA helicase, putative; n=1; B... 33 10.0
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 33 10.0
UniRef50_A2E5C2 Cluster: DEAD/DEAH box helicase family protein; ... 33 10.0
UniRef50_Q4P0P9 Cluster: Putative uncharacterized protein; n=1; ... 33 10.0
UniRef50_Q2H4C0 Cluster: Putative uncharacterized protein; n=1; ... 33 10.0
UniRef50_A2XVF7 Cluster: DEAD-box ATP-dependent RNA helicase 13;... 33 10.0
UniRef50_Q4WRP2 Cluster: ATP-dependent RNA helicase mss116, mito... 33 10.0
UniRef50_Q5K7L2 Cluster: ATP-dependent RNA helicase DBP9; n=1; F... 33 10.0
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 33 10.0
>UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9;
Eukaryota|Rep: ATP-dependent RNA helicase p62 -
Drosophila melanogaster (Fruit fly)
Length = 719
Score = 124 bits (300), Expect = 2e-27
Identities = 69/160 (43%), Positives = 86/160 (53%), Gaps = 2/160 (1%)
Frame = +1
Query: 253 FVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQ 432
F +L PF KNFY HP V RSPYEV+ YR E+TV G +V NPIQ F E + PDYV +
Sbjct: 236 FSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRG-QVPNPIQDFSEVHLPDYVMK 294
Query: 433 GVKTMGYKEPTPIQAQGWPIAMSGKI*LAYPKRVPAKRWPTSCQPLCT*TTNRLF--GEV 606
++ GYK PT IQAQGWPIAMSG + K K + + G+
Sbjct: 295 EIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQRGDG 354
Query: 607 MVRLLWSWAAXQRVSTTNFSKLLQILGHTSYVRNTCVFGG 726
+ L+ A R ++ G +SYVRNTCVFGG
Sbjct: 355 PIALV---LAPTRELAQQIQQVATEFGSSSYVRNTCVFGG 391
Score = 88.2 bits (209), Expect = 3e-16
Identities = 49/92 (53%), Positives = 60/92 (65%)
Frame = +3
Query: 507 DLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADFG 686
+ VG+ KTGSGKTL YILPAIVHINNQ P++RGDGPIALVL E + QQVA +FG
Sbjct: 320 NFVGIAKTGSGKTLGYILPAIVHINNQQPLQRGDGPIALVLAPTREL-AQQIQQVATEFG 378
Query: 687 XHILCS*HVCVWWWFLKESKPGTLRRGXKIVI 782
+ CV+ K + L+RG +IVI
Sbjct: 379 SSSYVR-NTCVFGGAPKGGQMRDLQRGCEIVI 409
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 105 bits (251), Expect = 2e-21
Identities = 44/82 (53%), Positives = 58/82 (70%)
Frame = +1
Query: 262 LQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 441
L+PF K+FY PHP V+ R+P EV+ +R ++TV G V +P Q FEE NFPD+V +
Sbjct: 186 LEPFEKDFYVPHPNVMARTPEEVQAFRERMQITVMGNSVPHPSQDFEEGNFPDFVMNEIN 245
Query: 442 TMGYKEPTPIQAQGWPIAMSGK 507
MG+ PT IQAQGWPIA+SG+
Sbjct: 246 KMGFPNPTAIQAQGWPIALSGR 267
Score = 81.0 bits (191), Expect = 4e-14
Identities = 43/94 (45%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADF 683
+DLVG+ +TGSGKTLAY+LP IVHI +Q P++RG+GP+ LVL E + Q V DF
Sbjct: 267 RDLVGIAQTGSGKTLAYMLPGIVHIAHQKPLQRGEGPVVLVLAPTREL-AQQIQTVVRDF 325
Query: 684 GXHIL-CS*HVCVWWWFLKESKPGTLRRGXKIVI 782
G H + C++ LK + L RG ++VI
Sbjct: 326 GTHSKPLIRYTCIFGGALKGPQVRDLERGVEVVI 359
>UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;
n=11; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
30 - Oryza sativa subsp. japonica (Rice)
Length = 666
Score = 104 bits (249), Expect = 4e-21
Identities = 44/89 (49%), Positives = 59/89 (66%)
Frame = +1
Query: 241 PRLGFVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPD 420
P+ F SL PF KNFY P V S +V +YR ++TV G +V P++YF+EANFPD
Sbjct: 201 PKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPD 260
Query: 421 YVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
Y Q + G+ EPTPIQ+QGWP+A+ G+
Sbjct: 261 YCMQAIAKSGFVEPTPIQSQGWPMALKGR 289
Score = 71.3 bits (167), Expect = 3e-11
Identities = 37/93 (39%), Positives = 56/93 (60%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADF 683
+D++G+ +TGSGKTL+Y+LP +VH+ QP + +GDGPI L+L E + QQ + F
Sbjct: 289 RDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLILAPTREL-AVQIQQESGKF 347
Query: 684 GXHILCS*HVCVWWWFLKESKPGTLRRGXKIVI 782
G + C++ K + LRRG +IVI
Sbjct: 348 GSYSRTR-STCIYGGAPKGPQIRDLRRGVEIVI 379
>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
- Gibberella zeae (Fusarium graminearum)
Length = 555
Score = 101 bits (243), Expect = 2e-20
Identities = 57/159 (35%), Positives = 84/159 (52%), Gaps = 3/159 (1%)
Frame = +1
Query: 259 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 438
SL F K+FY HP V RS +VE +R H++T++G V P++ F+EA FP YV V
Sbjct: 90 SLPKFEKSFYKEHPDVETRSDADVEAFRRKHQMTIAGSNVPKPVETFDEAGFPRYVMDEV 149
Query: 439 KTMGYKEPTPIQAQGWPIAMSGKI*LAYPKRVPAKRWPTSCQPLCT*TTNRLF---GEVM 609
K G+ PT IQ+QGWP+A+SG+ + + K T C P + G+
Sbjct: 150 KAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTL-TYCLPSIVHINAQPLLAPGDGP 208
Query: 610 VRLLWSWAAXQRVSTTNFSKLLQILGHTSYVRNTCVFGG 726
+ L+ A R + ++ G +S +RNTCV+GG
Sbjct: 209 IVLV---LAPTRELAVQIQEEMKKFGRSSRIRNTCVYGG 244
Score = 65.3 bits (152), Expect = 2e-09
Identities = 39/93 (41%), Positives = 52/93 (55%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADF 683
+D+VG+ +TGSGKTL Y LP+IVHIN QP + GDGPI LVL E + Q+ F
Sbjct: 172 RDVVGIAETGSGKTLTYCLPSIVHINAQPLLAPGDGPIVLVLAPTREL-AVQIQEEMKKF 230
Query: 684 GXHILCS*HVCVWWWFLKESKPGTLRRGXKIVI 782
G + CV+ K + L RG ++ I
Sbjct: 231 GRSSRIR-NTCVYGGVPKGPQIRDLSRGVEVCI 262
>UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5;
Eukaryota|Rep: Ethylene-responsive RNA helicase -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 474
Score = 100 bits (239), Expect = 6e-20
Identities = 56/166 (33%), Positives = 84/166 (50%), Gaps = 3/166 (1%)
Frame = +1
Query: 238 SPR-LGFVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANF 414
SPR + L PF KNFY P++ + EVEEYR E+T+ G +V PI+ F + F
Sbjct: 44 SPRKVNLDDLPPFEKNFYVESPSIAAMTEGEVEEYRRRREITIEGRDVPKPIKSFHDVGF 103
Query: 415 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LAYPKRVPAKRWPTSCQPLCT*TTNRL 594
PDYV Q ++ G+ EPTPIQAQGWP+A+ G+ + + K + +
Sbjct: 104 PDYVLQEIEKAGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTIAYLLPAIVHVNAQPI 163
Query: 595 F--GEVMVRLLWSWAAXQRVSTTNFSKLLQILGHTSYVRNTCVFGG 726
G+ + L+ A R + G +S ++NTC++GG
Sbjct: 164 LDHGDGPIVLV---LAPTRELAVQIQQEATKFGASSRIKNTCIYGG 206
Score = 75.4 bits (177), Expect = 2e-12
Identities = 41/93 (44%), Positives = 57/93 (61%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADF 683
+DL+G+ +TGSGKT+AY+LPAIVH+N QP + GDGPI LVL E + QQ A F
Sbjct: 134 RDLIGIAETGSGKTIAYLLPAIVHVNAQPILDHGDGPIVLVLAPTREL-AVQIQQEATKF 192
Query: 684 GXHILCS*HVCVWWWFLKESKPGTLRRGXKIVI 782
G + C++ K + L++G +IVI
Sbjct: 193 GASSRIK-NTCIYGGVPKGPQVRDLQKGVEIVI 224
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 99 bits (238), Expect = 8e-20
Identities = 63/174 (36%), Positives = 90/174 (51%), Gaps = 3/174 (1%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 435
V+L PF KNFY P +VL R+ E E + ++E+T+ G +V P FEE FPDYV
Sbjct: 112 VNLTPFRKNFYKPCDSVLARTVGETETFLTSNEITIKGDQVPTPSIEFEEGGFPDYVMNE 171
Query: 436 VKTMGYKEPTPIQAQGWPIAMSGKI*LAYPKRVPAKRWPTSCQPLCT*TTN--RL-FGEV 606
++ G+ +PT IQAQGWPIAMSG+ L + + + P N RL G+
Sbjct: 172 IRKQGFAKPTAIQAQGWPIAMSGRD-LVGVAQTGSGKTLAYVLPAVVHINNQPRLERGDG 230
Query: 607 MVRLLWSWAAXQRVSTTNFSKLLQILGHTSYVRNTCVFGGGS*KRASPGL*EGV 768
+ L+ A R ++ G ++VRNTC+FGG + + L GV
Sbjct: 231 PIALV---LAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLERGV 281
Score = 91.1 bits (216), Expect = 4e-17
Identities = 49/93 (52%), Positives = 62/93 (66%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADF 683
+DLVGV +TGSGKTLAY+LPA+VHINNQP + RGDGPIALVL E + QQVA +F
Sbjct: 195 RDLVGVAQTGSGKTLAYVLPAVVHINNQPRLERGDGPIALVLAPTREL-AQQIQQVAIEF 253
Query: 684 GXHILCS*HVCVWWWFLKESKPGTLRRGXKIVI 782
G + + C++ K + L RG +IVI
Sbjct: 254 GSNTHVR-NTCIFGGAPKGQQARDLERGVEIVI 285
>UniRef50_Q4TEE5 Cluster: Chromosome undetermined SCAF5464, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF5464,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 307
Score = 89.0 bits (211), Expect = 1e-16
Identities = 40/82 (48%), Positives = 52/82 (63%)
Frame = +1
Query: 262 LQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 441
L F KNFY H V + S +EVEEYR E+T+ G PI F +A+FP YV +
Sbjct: 43 LPKFEKNFYTEHLEVERTSQFEVEEYRRKKEITIRGTGCPKPIIKFHQAHFPQYVMDVLM 102
Query: 442 TMGYKEPTPIQAQGWPIAMSGK 507
+KEPTPIQAQG+P+A+SG+
Sbjct: 103 QQNFKEPTPIQAQGFPLALSGR 124
>UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 523
Score = 88.2 bits (209), Expect = 3e-16
Identities = 38/82 (46%), Positives = 52/82 (63%)
Frame = +1
Query: 262 LQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 441
L F KNFY P+V + EVE YR E+TV G +V P++ F + FP+YV Q +
Sbjct: 50 LPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEIT 109
Query: 442 TMGYKEPTPIQAQGWPIAMSGK 507
G+ EPTPIQ+QGWP+A+ G+
Sbjct: 110 KAGFVEPTPIQSQGWPMALRGR 131
Score = 72.5 bits (170), Expect = 1e-11
Identities = 36/65 (55%), Positives = 45/65 (69%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADF 683
+DL+G+ +TGSGKTLAY+LPAIVH+N QP + GDGPI LVL E + QQ A F
Sbjct: 131 RDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTREL-AVQIQQEATKF 189
Query: 684 GXHIL 698
G I+
Sbjct: 190 GVEIV 194
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 86.6 bits (205), Expect = 8e-16
Identities = 48/93 (51%), Positives = 61/93 (65%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADF 683
+D+VG+ +TGSGKTLAYI PA+VHI +Q +RRGDGPIALVL E + QQVA DF
Sbjct: 160 RDMVGIAQTGSGKTLAYIAPALVHITHQDQLRRGDGPIALVLAPTREL-AQQIQQVATDF 218
Query: 684 GXHILCS*HVCVWWWFLKESKPGTLRRGXKIVI 782
G I + + CV+ K + L RG +IVI
Sbjct: 219 GQRINAN-NTCVFGGAPKGPQIRDLERGAEIVI 250
Score = 72.9 bits (171), Expect = 1e-11
Identities = 47/157 (29%), Positives = 68/157 (43%), Gaps = 2/157 (1%)
Frame = +1
Query: 262 LQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 441
L PF K+FY P + S +V+ Y E+T+ G + P FE+ PDY+ +
Sbjct: 79 LTPFEKDFYKPSEFISNLSETDVKGYLAKLEITLKGRNIPRPSMEFEQGGLPDYILEEAN 138
Query: 442 TMGYKEPTPIQAQGWPIAMSGKI*LAYPKRVPAKRWPTSCQPLCT*TTNRLF--GEVMVR 615
G+ +PT IQAQG PIA+SG+ + + K L T G+ +
Sbjct: 139 KQGFSKPTAIQAQGMPIALSGRDMVGIAQTGSGKTLAYIAPALVHITHQDQLRRGDGPIA 198
Query: 616 LLWSWAAXQRVSTTNFSKLLQILGHTSYVRNTCVFGG 726
L+ A R ++ G NTCVFGG
Sbjct: 199 LV---LAPTRELAQQIQQVATDFGQRINANNTCVFGG 232
>UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 718
Score = 86.2 bits (204), Expect = 1e-15
Identities = 58/174 (33%), Positives = 84/174 (48%), Gaps = 3/174 (1%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 435
V L+PF K+F+ P +VL+RS EV +Y + +E+T+ G V PI F E+ FP
Sbjct: 56 VKLEPFKKDFFTPASSVLERSRTEVCQYLDKNEITMIGKNVPAPIMQFGESGFPSVFLDE 115
Query: 436 VKTMGYKEPTPIQAQGWPIAMSGKI*LAYPKRVPAKRWPTSCQPLCT*TTNR---LFGEV 606
+ G++EPT IQA GW IAMSG+ + K K P +N+ L G+
Sbjct: 116 MGRQGFQEPTSIQAVGWSIAMSGRDMVGIAKTGSGKTL-AYILPALIHISNQPRLLRGDG 174
Query: 607 MVRLLWSWAAXQRVSTTNFSKLLQILGHTSYVRNTCVFGGGS*KRASPGL*EGV 768
+ L+ A R ++ G + NTC+FGG S + L GV
Sbjct: 175 PIALV---LAPTRELAQQIQQVCNDFGRRMSIMNTCIFGGASKHPQADDLRRGV 225
>UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3;
Eukaryota|Rep: Helicase, truncated, putative -
Plasmodium falciparum (isolate 3D7)
Length = 352
Score = 85.4 bits (202), Expect = 2e-15
Identities = 39/85 (45%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTV-SGVEVHNPIQYFEEANFPDYVQQ 432
++L PF KNFY H + K S EV+E R+ H++T+ G V P+ + FPDYV +
Sbjct: 67 INLVPFEKNFYKEHEDISKLSTKEVKEIRDKHKITILEGENVPKPVVSINKIGFPDYVIK 126
Query: 433 GVKTMGYKEPTPIQAQGWPIAMSGK 507
+K PTPIQ QGWPIA+SGK
Sbjct: 127 SLKNNNIVAPTPIQIQGWPIALSGK 151
Score = 62.9 bits (146), Expect = 1e-08
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXE 644
KD++G +TGSGKTLA+ILPA VHI QP ++ GDGPI LVL E
Sbjct: 151 KDMIGKAETGSGKTLAFILPAFVHILAQPNLKYGDGPIVLVLAPTRE 197
>UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3;
Aconoidasida|Rep: RNA helicase, putative - Theileria
parva
Length = 635
Score = 83.8 bits (198), Expect = 5e-15
Identities = 38/85 (44%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTV-SGVEVHNPIQYFEEANFPDYVQQ 432
+ L F KNFY HP V + E +E R E+TV G +V P+ FE +FP Y+
Sbjct: 164 IELVKFEKNFYVEHPEVKAMTQQEADEIRRAKEITVVHGRDVPKPVVKFEYTSFPRYILS 223
Query: 433 GVKTMGYKEPTPIQAQGWPIAMSGK 507
++ G+KEPTPIQ Q WPIA+SG+
Sbjct: 224 SIEAAGFKEPTPIQVQSWPIALSGR 248
Score = 67.3 bits (157), Expect = 5e-10
Identities = 40/93 (43%), Positives = 55/93 (59%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADF 683
+D++G+ +TGSGKTLA++LPAIVHIN Q +R GDGPI LVL E + ++ A F
Sbjct: 248 RDMIGIAETGSGKTLAFLLPAIVHINAQALLRPGDGPIVLVLAPTREL-AEQIKETALVF 306
Query: 684 GXHILCS*HVCVWWWFLKESKPGTLRRGXKIVI 782
G V + K + LRRG +I+I
Sbjct: 307 GRSSKLKTSV-AYGGVPKRFQTIALRRGVEILI 338
>UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP2 -
Encephalitozoon cuniculi
Length = 495
Score = 80.2 bits (189), Expect = 7e-14
Identities = 35/79 (44%), Positives = 48/79 (60%)
Frame = +1
Query: 271 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 450
F KNFY ++ + +P EV +R +E+ V G V +PIQ FEEA F V + G
Sbjct: 47 FQKNFYQEAESISRMTPSEVSSFRKTNEMIVKGTNVPHPIQKFEEAGFSSEVVSSLVEKG 106
Query: 451 YKEPTPIQAQGWPIAMSGK 507
+ EPT IQ QGWP+A+SG+
Sbjct: 107 FSEPTAIQGQGWPMALSGR 125
Score = 68.5 bits (160), Expect = 2e-10
Identities = 29/47 (61%), Positives = 38/47 (80%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXE 644
+D+VG+ +TGSGKTL++ILPA+VH +Q P+RRGDGPI LVL E
Sbjct: 125 RDMVGIAQTGSGKTLSFILPALVHAKDQQPLRRGDGPIVLVLAPTRE 171
>UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 639
Score = 79.0 bits (186), Expect = 2e-13
Identities = 41/93 (44%), Positives = 60/93 (64%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADF 683
+D+VG+ KTGSGKTL+Y+LPA++HI+ Q +RRGDGPIAL+L E + +QV DF
Sbjct: 125 RDMVGIAKTGSGKTLSYLLPALMHIDQQSRLRRGDGPIALILAPTREL-AQQIKQVTDDF 183
Query: 684 GXHILCS*HVCVWWWFLKESKPGTLRRGXKIVI 782
G + + C++ K + L+ G +IVI
Sbjct: 184 GRAMKIK-NTCLFGGGAKRQQGDDLKYGVEIVI 215
Score = 74.9 bits (176), Expect = 2e-12
Identities = 53/172 (30%), Positives = 80/172 (46%), Gaps = 2/172 (1%)
Frame = +1
Query: 310 KRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWP 489
+RS E+ E+R E+T G +V +P FEE FP + + + PTPIQ+QGWP
Sbjct: 60 RRSEREISEWRKTKEITTKGRDVPDPALTFEEVGFPAEIADEWRYAEFTTPTPIQSQGWP 119
Query: 490 IAMSGKI*LAYPKRVPAKRWPTSCQPLC-T*TTNRL-FGEVMVRLLWSWAAXQRVSTTNF 663
IAMSG+ + K K L +RL G+ + L+ A R
Sbjct: 120 IAMSGRDMVGIAKTGSGKTLSYLLPALMHIDQQSRLRRGDGPIALI---LAPTRELAQQI 176
Query: 664 SKLLQILGHTSYVRNTCVFGGGS*KRASPGL*EGVRK*SFATXR*INWISLE 819
++ G ++NTC+FGGG+ ++ L GV R I+++S E
Sbjct: 177 KQVTDDFGRAMKIKNTCLFGGGAKRQQGDDLKYGVEIVIATPGRLIDFLSSE 228
>UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 535
Score = 78.6 bits (185), Expect = 2e-13
Identities = 36/83 (43%), Positives = 45/83 (54%)
Frame = +1
Query: 259 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 438
+L PF KNFY P R EV Y +E+ V+G E + FEE NFP + +
Sbjct: 109 TLPPFEKNFYVESPITANRDAEEVSRYLQENEIQVNGCESIKALLTFEECNFPQSILDVI 168
Query: 439 KTMGYKEPTPIQAQGWPIAMSGK 507
K Y +PTPIQA GWPI + GK
Sbjct: 169 KEQNYIKPTPIQAIGWPIVLQGK 191
Score = 51.2 bits (117), Expect = 4e-05
Identities = 21/47 (44%), Positives = 34/47 (72%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXE 644
KD+VG+ +TGSGKT+++++PAI+HI + P + +GP L+L E
Sbjct: 191 KDVVGIAETGSGKTISFLIPAIIHILDTPLAQYREGPRVLILAPTRE 237
Score = 37.9 bits (84), Expect = 0.35
Identities = 31/86 (36%), Positives = 40/86 (46%)
Frame = +2
Query: 635 PXRELAQQISASCCRFWXTHLMFVTRVCLVVVPKREQARDFEKGXENSHLLLPGRLIGFL 814
P REL QI+ +F + R C VP+ Q +DF+ G + + PGRLI F+
Sbjct: 234 PTRELVCQIADEAIKFTKGTAIKTVR-CFGGVPQSSQMKDFQSGCDIC-VATPGRLIDFI 291
Query: 815 WKRGPNQLYNRWXXILGS**RVDRML 892
KRG L IL DRML
Sbjct: 292 -KRGVTSLSRCTFLILD---EADRML 313
>UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;
Tetrahymena thermophila SB210|Rep: P68-like protein,
putative - Tetrahymena thermophila SB210
Length = 699
Score = 76.2 bits (179), Expect = 1e-12
Identities = 43/92 (46%), Positives = 57/92 (61%)
Frame = +3
Query: 507 DLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADFG 686
DL+G+ +TGSGKTL+++LPA+VHIN Q P++ G+GPIALVL E N+ Q+ FG
Sbjct: 252 DLIGIAQTGSGKTLSFMLPALVHINAQDPVKPGEGPIALVLAPTREL-ANQIQEQCFKFG 310
Query: 687 XHILCS*HVCVWWWFLKESKPGTLRRGXKIVI 782
S VCV+ K + LR G IVI
Sbjct: 311 SKCKIS-SVCVYGGAPKIYQEKELRNGCDIVI 341
Score = 41.9 bits (94), Expect = 0.022
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGV--EVHNPIQYFEEANFPDYVQ 429
V L+PF K FY ++ + E+ Y+ + + EV P + E FP Y+
Sbjct: 149 VELKPFQKVFYQVGKSI--HTDEEIATYQREKGIIIRSKHKEVPQPFIKWNETKFPKYIM 206
Query: 430 QGVKTMGYKEPTPIQAQ 480
++ + EP PIQAQ
Sbjct: 207 SVIEDSKFSEPMPIQAQ 223
>UniRef50_Q17BQ3 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 154
Score = 71.7 bits (168), Expect = 2e-11
Identities = 41/97 (42%), Positives = 61/97 (62%)
Frame = +3
Query: 432 RCKDNGLQRTDAHSSSRLADSYVWKDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDG 611
RC G+ +++ +RLA Y +VG+ KTGSGKTL+Y+LPA++ I+ Q +RRGDG
Sbjct: 17 RCL-RGVNHSNSDPVARLASRY----MVGITKTGSGKTLSYLLPALMPIDEQSRLRRGDG 71
Query: 612 PIALVLGGLXES*HNKFQQVAADFGXHILCS*HVCVW 722
PIAL+L E + +QV DFG I ++C++
Sbjct: 72 PIALILAPTREL-AQQIKQVTDDFGRAIKIK-NICLF 106
>UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 518
Score = 71.3 bits (167), Expect = 3e-11
Identities = 30/84 (35%), Positives = 47/84 (55%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 435
+ +PFNKNFY+ HP + K+S E+++ R + VSG P F F + +
Sbjct: 61 IDYKPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDEQMMAS 120
Query: 436 VKTMGYKEPTPIQAQGWPIAMSGK 507
++ + Y +PT IQ Q PIA+SG+
Sbjct: 121 IRKLEYTQPTQIQCQALPIALSGR 144
Score = 59.7 bits (138), Expect = 1e-07
Identities = 23/41 (56%), Positives = 34/41 (82%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 626
+D++G+ KTGSGKT A++ PA+VHI +QP ++ GDGPI L+
Sbjct: 144 RDIIGIAKTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLI 184
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 70.9 bits (166), Expect = 4e-11
Identities = 28/84 (33%), Positives = 47/84 (55%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 435
+ +P NK+FY+ ++ + E +YR + VSG +VH P++ FE+ F +
Sbjct: 183 IDYEPINKDFYEELESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSA 242
Query: 436 VKTMGYKEPTPIQAQGWPIAMSGK 507
+K Y++PT IQ Q PI +SG+
Sbjct: 243 IKKQAYEKPTAIQCQALPIVLSGR 266
Score = 60.5 bits (140), Expect = 6e-08
Identities = 25/53 (47%), Positives = 37/53 (69%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKF 662
+D++G+ KTGSGKT A++LP IVHI +QP ++R +GPI ++ E H F
Sbjct: 266 RDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIGVICAPTRELAHQIF 318
>UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein;
n=2; Tetrahymena thermophila|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 713
Score = 70.1 bits (164), Expect = 7e-11
Identities = 38/94 (40%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
Frame = +3
Query: 507 DLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADFG 686
DL+G+ +TGSGKTL+++LP+IVHIN QP +++GDGPI LVL E + ++ + FG
Sbjct: 140 DLIGIAETGSGKTLSFLLPSIVHINAQPTVKKGDGPIVLVLAPTREL-AMQIERESERFG 198
Query: 687 --XHILCS*HVCVWWWFLKESKPGTLRRGXKIVI 782
+ C+ C++ K S+ L++G +VI
Sbjct: 199 KSSKLKCA---CIYGGADKYSQRALLQQGVDVVI 229
Score = 46.8 bits (106), Expect = 8e-04
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = +1
Query: 259 SLQPFNKNFYDPHPTVLKRSPYEVEE-YRNNHEVTVSGV-EVHNPIQYFEEANFPDYVQQ 432
+L F K FY + R+ E+EE YR NH S +V +P + + +FP Y+
Sbjct: 57 NLTTFQKVFYKESQKI--RTEEEIEEFYRQNHISAKSPHGKVPDPFLSWTDTHFPQYIMN 114
Query: 433 GVKTMGYKEPTPIQAQGWPIAMSG 504
V +++P+PIQ+ +P+ +SG
Sbjct: 115 EVTHAKFEKPSPIQSLAFPVVLSG 138
>UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1;
Ostreococcus tauri|Rep: DEAD-box protein abstrakt -
Ostreococcus tauri
Length = 1030
Score = 68.9 bits (161), Expect = 2e-10
Identities = 38/94 (40%), Positives = 57/94 (60%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADF 683
+D +G+ KTGSGKTLAYILP + HIN Q P++ GDGPI +++G E + + A +
Sbjct: 368 RDCIGIAKTGSGKTLAYILPMLRHINAQEPLKNGDGPIGMIMGPTREL-VTQIGKEAKRY 426
Query: 684 GXHILCS*HVCVWWWFLKESKPGTLRRGXKIVIC 785
G + + V V+ ++ G L+RG +IV C
Sbjct: 427 GKALGFN-AVSVYGGSGIAAQIGELKRGAEIVAC 459
Score = 43.6 bits (98), Expect = 0.007
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQ 432
+ +P K+FY + + + R + + G +V PI+ + A + +
Sbjct: 284 IDYEPVKKDFYIESKEISSMTKAQTRALRAELDGIKCRGKKVPKPIKTWAHAGLSGRIHE 343
Query: 433 GVKTMGYKEPTPIQAQGWPIAMSGK 507
++ G+++P PIQAQ P+ MSG+
Sbjct: 344 LIRRCGFEKPMPIQAQALPVIMSGR 368
>UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=4; Saccharomycetales|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 913
Score = 68.5 bits (160), Expect = 2e-10
Identities = 26/42 (61%), Positives = 37/42 (88%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 629
+D++GV KTGSGKTL+++LP + HI +QPP+RRGDGPI L++
Sbjct: 355 RDIIGVAKTGSGKTLSFVLPLLRHIQDQPPLRRGDGPIGLIM 396
Score = 44.4 bits (100), Expect = 0.004
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQ 432
+ PF K+FY +LK EV R + + V GV PI + + P +
Sbjct: 270 IQYHPFRKDFYTEPTEILKLPEEEVANLRLKLDGIRVRGVNCTRPIIRWSQLGLPSTIMS 329
Query: 433 GVK-TMGYKEPTPIQAQGWPIAMSGK 507
++ + Y P+ IQAQ P MSG+
Sbjct: 330 IIEGRLNYSSPSSIQAQAIPAIMSGR 355
>UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n=6;
Trypanosomatidae|Rep: Putative DEAD-box RNA helicase
HEL64 - Trypanosoma brucei brucei
Length = 568
Score = 68.1 bits (159), Expect = 3e-10
Identities = 37/93 (39%), Positives = 52/93 (55%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADF 683
+DLVGV KTGSGKTL +++PA+ HI Q P+R GDGP+ +VL E ++
Sbjct: 140 RDLVGVAKTGSGKTLGFMVPALAHIAVQEPLRSGDGPMVVVLAPTRELAQQIEEETKKVI 199
Query: 684 GXHILCS*HVCVWWWFLKESKPGTLRRGXKIVI 782
+ C CV+ K + G LRRG I++
Sbjct: 200 PGDVYCG---CVYGGAPKGPQLGLLRRGVHILV 229
Score = 47.6 bits (108), Expect = 4e-04
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +1
Query: 298 PTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEE--ANFPDYVQQGVKTMGYKEPTPI 471
P + S E ++R H +T+ G + P+ F+ P Y+ + + + PTP+
Sbjct: 69 PEAGQLSEEEATKWREEHVITIFGDDCPPPMSSFDHLCGIVPPYLLKKLTAQNFTAPTPV 128
Query: 472 QAQGWPIAMSGK 507
QAQ WP+ +SG+
Sbjct: 129 QAQSWPVLLSGR 140
>UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena
thermophila SB210|Rep: CLN3 protein - Tetrahymena
thermophila SB210
Length = 1138
Score = 67.7 bits (158), Expect = 4e-10
Identities = 29/84 (34%), Positives = 46/84 (54%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 435
+ + F KNFY HP + K + +VE+ R E+ VSGV PI F F + + +
Sbjct: 17 IKYEAFTKNFYQEHPDITKLTEQQVEKIRKEFEIKVSGVRPPKPIVSFGHLGFDEELMRQ 76
Query: 436 VKTMGYKEPTPIQAQGWPIAMSGK 507
+ +G+++PT IQ Q P +SG+
Sbjct: 77 ITKLGFEKPTQIQCQALPCGLSGR 100
Score = 54.8 bits (126), Expect = 3e-06
Identities = 22/47 (46%), Positives = 34/47 (72%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXE 644
+D+VGV KTGSGKT++Y+ P ++HI +Q + + +GPI L+L E
Sbjct: 100 RDIVGVAKTGSGKTVSYLWPLLIHILDQRELEKNEGPIGLILAPTRE 146
>UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=6; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Leishmania major
Length = 502
Score = 66.9 bits (156), Expect = 7e-10
Identities = 29/47 (61%), Positives = 38/47 (80%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXE 644
+D+VGV KTGSGKT+A+++PA +HI QPP++ GDGPIALVL E
Sbjct: 183 RDIVGVAKTGSGKTMAFMIPAALHIMAQPPLQPGDGPIALVLAPTRE 229
Score = 52.0 bits (119), Expect = 2e-05
Identities = 23/76 (30%), Positives = 39/76 (51%)
Frame = +1
Query: 280 NFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKE 459
NFY P RS E+ + + +T+ G V P+ F + PD + Q G+++
Sbjct: 111 NFYKPQKP---RSEEEIATWLRENSITIYGDRVPQPMLEFSDLVAPDAIHQAFMDAGFQK 167
Query: 460 PTPIQAQGWPIAMSGK 507
PTPIQ+ WP+ ++ +
Sbjct: 168 PTPIQSVSWPVLLNSR 183
>UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;
n=2; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 42 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1166
Score = 66.9 bits (156), Expect = 7e-10
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLG---GLXES*HNKFQQVA 674
+D +GV KTGSGKTL ++LP + HI +QPP+ GDGPI LV+ L + H+ ++ +
Sbjct: 567 RDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFS 626
Query: 675 ADFGXHILCS*HVCVWWWFLKESKPGTLRRGXKIVIC 785
G I C V V+ + L+RG +IV+C
Sbjct: 627 KPLG--IRC---VPVYGGSGVAQQISELKRGTEIVVC 658
Score = 63.3 bits (147), Expect = 8e-09
Identities = 28/84 (33%), Positives = 45/84 (53%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 435
+ +PF KNFY + + + EV YR E+ V G +V PI+++ + +
Sbjct: 484 IEYEPFRKNFYIEVKDISRMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDT 543
Query: 436 VKTMGYKEPTPIQAQGWPIAMSGK 507
+K + Y++P PIQ Q PI MSG+
Sbjct: 544 MKKLNYEKPMPIQTQALPIIMSGR 567
>UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr3 scaffold_8, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 971
Score = 66.5 bits (155), Expect = 9e-10
Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLG---GLXES*HNKFQQVA 674
+D +G+ KTGSGKTLA++LP + HI +QPP+ GDGPI L++ L + H+ ++ A
Sbjct: 522 RDCIGIAKTGSGKTLAFVLPMLRHIKDQPPVMPGDGPIGLIMAPTRELVQQIHSDIKKFA 581
Query: 675 ADFGXHILCS*HVCVWWWFLKESKPGTLRRGXKIVIC 785
G I C V V+ + L+RG ++V+C
Sbjct: 582 KVVG--ISC---VPVYGGSGVAQQISELKRGAEVVVC 613
Score = 62.5 bits (145), Expect = 1e-08
Identities = 27/84 (32%), Positives = 44/84 (52%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 435
+ +PF KNFY + +P E+ YR E+ + G +V P++ + + +
Sbjct: 439 IDYKPFRKNFYIEVKESARMTPEEIAAYRKQLELKIHGKDVPKPVKTWHQTGLTTKILDT 498
Query: 436 VKTMGYKEPTPIQAQGWPIAMSGK 507
+K + Y+ P PIQAQ PI MSG+
Sbjct: 499 IKKLNYERPMPIQAQALPIIMSGR 522
>UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 723
Score = 66.5 bits (155), Expect = 9e-10
Identities = 39/94 (41%), Positives = 55/94 (58%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADF 683
+D +GV KTGSGKTLAYILP + HIN Q P+ GDGPI +++G E + + +
Sbjct: 155 RDCIGVAKTGSGKTLAYILPMLRHINAQEPLASGDGPIGMIMGPTREL-VTQIGKDCKRY 213
Query: 684 GXHILCS*HVCVWWWFLKESKPGTLRRGXKIVIC 785
G + S V V+ ++ G L+RG +IV C
Sbjct: 214 GKAMGFS-AVSVYGGSGIAAQIGDLKRGAEIVAC 246
Score = 51.2 bits (117), Expect = 4e-05
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQ 432
+ +P KNFY + + EV++ R + + G +V PI+ + +A + V +
Sbjct: 71 IDYEPVKKNFYIEAKEIASMTKAEVKQLRVELDGIKCRGKKVPKPIKTWAQAGLNNRVHE 130
Query: 433 GVKTMGYKEPTPIQAQGWPIAMSGK 507
++ G+++P PIQAQ P+ MSG+
Sbjct: 131 LIRRSGFEKPMPIQAQALPVIMSGR 155
>UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;
n=15; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
45 - Arabidopsis thaliana (Mouse-ear cress)
Length = 989
Score = 66.5 bits (155), Expect = 9e-10
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADF 683
+D +GV KTGSGKTL ++LP + HI +QPP+ GDGPI LV+ E QQ+ +D
Sbjct: 434 RDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRE----LVQQIYSDI 489
Query: 684 GXHILCS*HVC--VWWWFLKESKPGTLRRGXKIVIC 785
+C V+ + L+RG +IV+C
Sbjct: 490 RKFSKALGIICVPVYGGSGVAQQISELKRGTEIVVC 525
Score = 63.7 bits (148), Expect = 6e-09
Identities = 29/84 (34%), Positives = 45/84 (53%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 435
+ +PF KNFY + + + V YR E+ V G +V PIQ++ + +
Sbjct: 351 IEYEPFRKNFYIEVKDISRMTQDAVNAYRKELELKVHGKDVPRPIQFWHQTGLTSKILDT 410
Query: 436 VKTMGYKEPTPIQAQGWPIAMSGK 507
+K + Y++P PIQAQ PI MSG+
Sbjct: 411 LKKLNYEKPMPIQAQALPIIMSGR 434
>UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68;
n=2; Cryptosporidium|Rep: Similar to RNA-dependent
helicase p68 - Cryptosporidium hominis
Length = 406
Score = 64.9 bits (151), Expect = 3e-09
Identities = 35/92 (38%), Positives = 54/92 (58%)
Frame = +3
Query: 507 DLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADFG 686
D++G+ +TGSGKTL ++LPA++HI QP +R GDGPI LVL E + ++ A FG
Sbjct: 27 DMIGIAETGSGKTLGFLLPAMIHIRAQPLLRYGDGPICLVLAPTREL-VEQIREQANQFG 85
Query: 687 XHILCS*HVCVWWWFLKESKPGTLRRGXKIVI 782
I + ++ K + ++R G +I I
Sbjct: 86 -SIFKLRNTAIYGGVPKRPQQASIRNGVEICI 116
Score = 33.5 bits (73), Expect = 7.5
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +1
Query: 457 EPTPIQAQGWPIAMSG 504
EPT IQ QGWP+A+SG
Sbjct: 10 EPTAIQVQGWPVALSG 25
>UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium
tetraurelia|Rep: RNA helicase, putative - Paramecium
tetraurelia
Length = 1157
Score = 64.5 bits (150), Expect = 4e-09
Identities = 35/94 (37%), Positives = 54/94 (57%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADF 683
+D +G+ +TGSGKTLAY+LP + H+ +QP ++ GDGPIA+++ E H + V +
Sbjct: 542 RDFIGIAETGSGKTLAYLLPLLRHVLDQPALKDGDGPIAIIMAPTRELAHQIY--VNCRW 599
Query: 684 GXHILCS*HVCVWWWFLKESKPGTLRRGXKIVIC 785
IL VC + L+RG +IV+C
Sbjct: 600 FTSILNLNVVCCVGGAGIAGQLSDLKRGTEIVVC 633
Score = 46.8 bits (106), Expect = 8e-04
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNN-HEVTVSGVEVHNPIQYFEEANFPDYVQQ 432
+ QPF K+FY +++ +P E ++ R ++ V G +V PIQ + + D V
Sbjct: 457 IDYQPFRKDFYREVSELVQMTPEEAKKLRQQLGDIKVRGKDVPKPIQNWYQCGLNDRVLN 516
Query: 433 G-VKTMGYKEPTPIQAQGWPIAMSGK 507
++ + P PIQAQ P MSG+
Sbjct: 517 VLIEKKKFINPFPIQAQAVPCIMSGR 542
>UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 598
Score = 64.1 bits (149), Expect = 5e-09
Identities = 28/46 (60%), Positives = 35/46 (76%)
Frame = +3
Query: 507 DLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXE 644
DL+G+ KTGSGKT A+++PA+VHI Q P+ RGDGPI LVL E
Sbjct: 164 DLIGIAKTGSGKTAAFLIPAMVHIGLQEPMYRGDGPIVLVLSPTRE 209
Score = 40.7 bits (91), Expect = 0.050
Identities = 17/60 (28%), Positives = 34/60 (56%)
Frame = +1
Query: 325 EVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 504
E ++ ++ + + +V +P FEE N PD + + + +++PTPIQ+ P+A+ G
Sbjct: 103 EQVQFLKSNAIKLLASDVPSPALTFEELNLPDTITKTITDNKWEKPTPIQSVSIPVALKG 162
>UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 970
Score = 63.3 bits (147), Expect = 8e-09
Identities = 34/94 (36%), Positives = 53/94 (56%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADF 683
+D++G+ KTGSGKTLA++LP HI +QP + GDGPIA++L E +++ A F
Sbjct: 342 RDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKE-ANKF 400
Query: 684 GXHILCS*HVCVWWWFLKESKPGTLRRGXKIVIC 785
+ C + + L+RG +IV+C
Sbjct: 401 AKPLGLK-VACTYGGVGISEQIADLKRGAEIVVC 433
Score = 48.8 bits (111), Expect = 2e-04
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQ 432
V + F KNFY + + + EV+ YR + +TV G++ PI+ + + +
Sbjct: 258 VYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMN 317
Query: 433 GVKTMGYKEPTPIQAQGWPIAMSGK 507
+K Y +PT IQAQ P MSG+
Sbjct: 318 VLKKFEYSKPTSIQAQAIPSIMSGR 342
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 63.3 bits (147), Expect = 8e-09
Identities = 27/56 (48%), Positives = 35/56 (62%)
Frame = +1
Query: 331 EEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAM 498
E YR+ HE+TV G V PI FE FP + + ++ G+ PTPIQAQ WPIA+
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIAL 185
Score = 44.8 bits (101), Expect = 0.003
Identities = 32/93 (34%), Positives = 44/93 (47%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADF 683
+D+V + KTGSGKTL Y+LP +HI R GP LVL E + + A F
Sbjct: 188 QDVVAIAKTGSGKTLGYLLPGFMHIKRLQNNPR-SGPTVLVLAPTREL-ATQILEEAVKF 245
Query: 684 GXHILCS*HVCVWWWFLKESKPGTLRRGXKIVI 782
G S C++ K + L RG +V+
Sbjct: 246 GRSSRIS-STCLYGGAPKGPQLRDLDRGVDVVV 277
>UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;
Coelomata|Rep: ATP-dependent RNA helicase DDX42 - Homo
sapiens (Human)
Length = 938
Score = 62.9 bits (146), Expect = 1e-08
Identities = 27/84 (32%), Positives = 44/84 (52%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 435
+ PF KNFY+ H + +P ++ + R+ + VSG P F F + +
Sbjct: 208 IDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQ 267
Query: 436 VKTMGYKEPTPIQAQGWPIAMSGK 507
++ Y +PTPIQ QG P+A+SG+
Sbjct: 268 IRKSEYTQPTPIQCQGVPVALSGR 291
Score = 55.6 bits (128), Expect = 2e-06
Identities = 21/42 (50%), Positives = 33/42 (78%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 629
+D++G+ KTGSGKT A+I P ++HI +Q + GDGPIA+++
Sbjct: 291 RDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIV 332
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 40; n=2; core eudicotyledons|Rep: Probable
DEAD-box ATP-dependent RNA helicase 40 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1088
Score = 62.1 bits (144), Expect = 2e-08
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +1
Query: 274 NKNFYDPH----PTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 441
NK+ PH P V SP E+ YR HEVT +G + P FE + P + + +
Sbjct: 394 NKSLVRPHFVTSPDVPHLSPVEI--YRKQHEVTTTGENIPAPYITFESSGLPPEILRELL 451
Query: 442 TMGYKEPTPIQAQGWPIAMSGKI*LAYPK 528
+ G+ PTPIQAQ WPIA+ + +A K
Sbjct: 452 SAGFPSPTPIQAQTWPIALQSRDIVAIAK 480
Score = 43.6 bits (98), Expect = 0.007
Identities = 31/93 (33%), Positives = 46/93 (49%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADF 683
+D+V + KTGSGKTL Y++PA + + + R +GP L+L E + Q A F
Sbjct: 473 RDIVAIAKTGSGKTLGYLIPAFILLRHCRNDSR-NGPTVLILAPTREL-ATQIQDEALRF 530
Query: 684 GXHILCS*HVCVWWWFLKESKPGTLRRGXKIVI 782
G S C++ K + L RG IV+
Sbjct: 531 GRSSRIS-CTCLYGGAPKGPQLKELERGADIVV 562
>UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 811
Score = 60.9 bits (141), Expect = 4e-08
Identities = 23/42 (54%), Positives = 36/42 (85%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 629
+D++G+ KTGSGKT AY+ PAIVHI +QP ++ G+GP+A+++
Sbjct: 303 RDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIV 344
Score = 60.5 bits (140), Expect = 6e-08
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 435
+ Q FNKNFY+ H + + +V +N + V G++ P+ F +F + +
Sbjct: 220 IQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEA 279
Query: 436 VKTMGYKEPTPIQAQGWPIAMSGKI*LAYPK----RVPAKRWP 552
++ Y++PTPIQA P A+SG+ L K + A WP
Sbjct: 280 IRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWP 322
>UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1151
Score = 60.9 bits (141), Expect = 4e-08
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXE---S*HNKFQQVA 674
+D++GV KTGSGKT+A++LP HI +Q P++ DGPI L++ E H + +
Sbjct: 592 RDVIGVAKTGSGKTIAFLLPMFRHIRDQRPLKGSDGPIGLIMTPTRELATQIHKECKPFL 651
Query: 675 ADFGXHILCS*HVCVWWWFLKESKPGTLRRGXKIVIC 785
G VC + + + + L+RG +I++C
Sbjct: 652 KAMGLRA-----VCAYGGAIIKDQIADLKRGAEIIVC 683
Score = 48.0 bits (109), Expect = 3e-04
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQ 432
+ L PF KNFY + + + E+ + R + + V+G +V P+Q + +
Sbjct: 508 LDLPPFRKNFYTEPTELAEMTEAEIADLRLELDGIKVAGKDVPKPVQKWSQCGLDVKSLD 567
Query: 433 GVKTMGYKEPTPIQAQGWPIAMSGK 507
+ +GY+ PT IQ Q P MSG+
Sbjct: 568 VITKLGYERPTSIQMQAIPAIMSGR 592
>UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase prp11; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase prp11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1014
Score = 60.9 bits (141), Expect = 4e-08
Identities = 33/94 (35%), Positives = 55/94 (58%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADF 683
+D++GV KTGSGKT+A++LP HI +Q P++ G+GPIA+++ E F++ F
Sbjct: 456 RDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQIFRE-CKPF 514
Query: 684 GXHILCS*HVCVWWWFLKESKPGTLRRGXKIVIC 785
+L C + + + L+RG +IV+C
Sbjct: 515 -LKLLNIRACCAYGGAPIKDQIADLKRGAEIVVC 547
Score = 48.0 bits (109), Expect = 3e-04
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQ 432
++ + F K+FY + SP EV+E R + + + + G++ P+ + +
Sbjct: 372 INYEDFKKDFYVEPEELKNLSPAEVDELRASLDGIKIRGIDCPKPVTSWSQCGLSAQTIS 431
Query: 433 GVKTMGYKEPTPIQAQGWPIAMSGK 507
+ ++GY++PT IQAQ P SG+
Sbjct: 432 VINSLGYEKPTSIQAQAIPAITSGR 456
>UniRef50_UPI0000E47F75 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 59; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 -
Strongylocentrotus purpuratus
Length = 474
Score = 60.5 bits (140), Expect = 6e-08
Identities = 24/72 (33%), Positives = 42/72 (58%)
Frame = +1
Query: 286 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 465
Y HP + + +P +V++ RN ++ V G+ + PI FE+ P + +++ GY PT
Sbjct: 326 YREHPDISQLAPEQVQDIRNEVQIFVEGINIQRPILEFEQLRLPAKIHSNLQSSGYITPT 385
Query: 466 PIQAQGWPIAMS 501
PIQ Q PI+++
Sbjct: 386 PIQMQAIPISLA 397
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 60.5 bits (140), Expect = 6e-08
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXE 644
+DL+G +TGSGKT A+ +P + H QPPIRRGDGP+ALVL E
Sbjct: 156 RDLLGCAETGSGKTAAFTIPMLQHCLVQPPIRRGDGPLALVLAPTRE 202
Score = 41.5 bits (93), Expect = 0.028
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +1
Query: 286 YDPHPTVLKRSPYEVEEY-RNNHEVTVSG--VEVHNPIQYFEEANFPDYVQQGVKTMGYK 456
+ P V + +P ++EE R N +VTVS PI+ F + + + + Y
Sbjct: 80 WQPSERVSRMNPDQIEEVVRLNLDVTVSSDSTAAPGPIESFNDMCLHPSIMKDIAYHEYT 139
Query: 457 EPTPIQAQGWPIAMSGK 507
P+ IQAQ PIA+SG+
Sbjct: 140 RPSSIQAQAMPIALSGR 156
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 60.5 bits (140), Expect = 6e-08
Identities = 28/66 (42%), Positives = 39/66 (59%)
Frame = +1
Query: 331 EEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI 510
E Y HE+TVSG +V P+ FE P+ + + V + G+ P+PIQAQ WPIAM +
Sbjct: 141 EAYCRKHEITVSGGQVPPPLMSFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRD 200
Query: 511 *LAYPK 528
+A K
Sbjct: 201 IVAIAK 206
Score = 42.3 bits (95), Expect = 0.016
Identities = 31/93 (33%), Positives = 44/93 (47%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADF 683
+D+V + KTGSGKTL Y++P +H+ R GP LVL E + Q A F
Sbjct: 199 RDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDSR-MGPTILVLSPTREL-ATQIQVEALKF 256
Query: 684 GXHILCS*HVCVWWWFLKESKPGTLRRGXKIVI 782
G S C++ K + + RG IV+
Sbjct: 257 GKSSKIS-CACLYGGAPKGPQLKEIERGVDIVV 288
>UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-PA
- Drosophila melanogaster (Fruit fly)
Length = 1224
Score = 60.1 bits (139), Expect = 8e-08
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADF 683
+DL+G+ KTGSGKTLA+ILP HI +QP + GDG IA+++ E Q+ D
Sbjct: 548 RDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDGAIAIIMAPTRE----LCMQIGKDI 603
Query: 684 G--XHILCS*HVCVWWWFLKESKPGTLRRGXKIVIC 785
L VCV+ + L+RG +I++C
Sbjct: 604 RKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVC 639
Score = 56.8 bits (131), Expect = 7e-07
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQ 432
V+ PF KNFY P + + + +VE+YR++ E + V G PI+ + + +
Sbjct: 464 VTYAPFRKNFYVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEME 523
Query: 433 GVKTMGYKEPTPIQAQGWPIAMSGK 507
++ +G+++PTPIQ Q P MSG+
Sbjct: 524 VLRRLGFEKPTPIQCQAIPAIMSGR 548
>UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n=1;
Plasmodium vivax|Rep: ATP-dependent RNA helicase,
putative - Plasmodium vivax
Length = 1341
Score = 59.7 bits (138), Expect = 1e-07
Identities = 22/42 (52%), Positives = 34/42 (80%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 629
+D++ + +TGSGKTL+Y+ P I H+ +QPP+R DGPIA++L
Sbjct: 707 RDVIAIAETGSGKTLSYLFPLIRHVLHQPPLRNNDGPIAIIL 748
Score = 39.5 bits (88), Expect = 0.11
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYR-NNHEVTVSGVEVHNPIQYFEEANFPDYVQQ 432
V P KN Y + +V+ +R NN + V G P+QYF + P +
Sbjct: 623 VEYLPIKKNIYVQVSEITNMKESDVDLFRKNNGNIIVRGKNCPRPVQYFYQCGLPSKILP 682
Query: 433 GVKTMGYKEPTPIQAQGWPIAMSGK 507
++ +K+ IQ Q P M G+
Sbjct: 683 ILERKQFKKMFGIQMQTIPALMCGR 707
>UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=15; Pezizomycotina|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Gibberella zeae (Fusarium graminearum)
Length = 1227
Score = 59.7 bits (138), Expect = 1e-07
Identities = 23/42 (54%), Positives = 34/42 (80%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 629
+D++GV KTGSGKT+A++LP HI +QPP++ DGPI L++
Sbjct: 635 RDVIGVAKTGSGKTVAFLLPMFRHIKDQPPLKDTDGPIGLIM 676
Score = 49.2 bits (112), Expect = 1e-04
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQ 432
+ ++P KNF+ + + EV + R + + V+G +V P+Q + +
Sbjct: 551 IEIEPIRKNFWHEPAELSLLTEAEVADLRLELDGIKVNGKDVPKPVQKWAQCGLTRQTLD 610
Query: 433 GVKTMGYKEPTPIQAQGWPIAMSGK 507
V +GY++PTPIQ Q P MSG+
Sbjct: 611 VVDNLGYEKPTPIQMQALPALMSGR 635
>UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 730
Score = 59.3 bits (137), Expect = 1e-07
Identities = 25/57 (43%), Positives = 36/57 (63%)
Frame = +1
Query: 337 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
+R + +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + +
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNR 339
Score = 44.4 bits (100), Expect = 0.004
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLGGLXES*HNKFQQV 671
+D++GV +TGSGKT A++LP +V I + P + R + GP A+++ E + ++
Sbjct: 339 RDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTREL-AQQIEEE 397
Query: 672 AADFGXHILCS*HVCVWWWFLKESKPGTLRRGXKIVI 782
FG +L V V +E + LR G ++VI
Sbjct: 398 TNKFG-KLLGIKTVSVIGGASREDQGMKLRMGVEVVI 433
>UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=7;
Bilateria|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 741
Score = 59.3 bits (137), Expect = 1e-07
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 12/89 (13%)
Frame = +1
Query: 277 KNFYDPHPTVLKRSPYEVEEYR-NNHEVTVS---------GVEVHNPIQYFEEA--NFPD 420
KNFY+ P V +P EV E+R N+ + V + NP+Q FE+A +P+
Sbjct: 274 KNFYNELPEVANMTPEEVSEFRCANNNIVVDRTFKDADKPSAPIPNPVQTFEQAFHEYPE 333
Query: 421 YVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
+++ +K G+ +P+PIQAQ WP+ + G+
Sbjct: 334 LLEE-IKKQGFAKPSPIQAQAWPVLLKGE 361
Score = 50.4 bits (115), Expect = 6e-05
Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 3/50 (6%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGD---GPIALVLGGLXE 644
+DL+G+ +TG+GKTLA++LPA +HI Q P+ RG+ GP LV+ E
Sbjct: 361 EDLIGIAQTGTGKTLAFLLPAFIHIEGQ-PVPRGEARGGPNVLVMAPTRE 409
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 58.8 bits (136), Expect = 2e-07
Identities = 44/123 (35%), Positives = 62/123 (50%)
Frame = +3
Query: 507 DLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADFG 686
D+VG+ KTGSGKT ++++PA++HI+ Q I DGPI LVL E + +VAA F
Sbjct: 124 DMVGIAKTGSGKTASFLIPALMHISAQRKISENDGPIVLVLSPTREL-ALQTDEVAAQFC 182
Query: 687 XHILCS*HVCVWWWFLKESKPGTLRRGXKIVICYXQVD*LDFFGKGAQTNFTTGGXXF*V 866
+ HVC++ + + LR +IV +DF G F F V
Sbjct: 183 VKMGYK-HVCIYGGEDRHRQINKLRFHPEIVTA-TPGRLIDFLQSGV---FNPNRANFLV 237
Query: 867 LDE 875
LDE
Sbjct: 238 LDE 240
Score = 39.1 bits (87), Expect = 0.15
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +1
Query: 325 EVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 504
E ++Y +++ + G + FEE N P + + +K + PTPIQ+ PI + G
Sbjct: 63 EQKKYLEKNQIKLLGENIPPVAVTFEELNLPQEIMEVIKENNWTNPTPIQSLSIPIGLKG 122
>UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila
melanogaster|Rep: LD33749p - Drosophila melanogaster
(Fruit fly)
Length = 703
Score = 58.0 bits (134), Expect = 3e-07
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 13/92 (14%)
Frame = +1
Query: 268 PFNKNFYDPHPTVLKRSPYEVEEYRN-NHEVTVSGV----------EVHNPIQYFEE--A 408
P KNFY P V + E+E R N+++TVS V + NP+ FE+ A
Sbjct: 230 PLTKNFYKEAPEVANLTKSEIERIREENNKITVSYVFEPKEGETSPPIPNPVWTFEQCFA 289
Query: 409 NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 504
+PD +++ K MG+ +P+PIQ+Q WPI + G
Sbjct: 290 EYPDMLEEITK-MGFSKPSPIQSQAWPILLQG 320
Score = 42.7 bits (96), Expect = 0.012
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Frame = +3
Query: 507 DLVGVPKTGSGKTLAYILPAIVHINNQ--PPIRRGDGPIALVLGGLXES*HNKFQQVAAD 680
D++G+ +TG+GKTLA++LP ++H Q P RG G LVL E + +
Sbjct: 322 DMIGIAQTGTGKTLAFLLPGMIHTEYQSTPRGTRG-GANVLVLAPTREL-ALQIEMEVKK 379
Query: 681 FGXHILCS*HVCVWWWFLKESKPGTLRRGXKIVIC 785
+ + + VCV+ + + L RG +I+IC
Sbjct: 380 YSFRGMKA--VCVYGGGNRNMQISDLERGAEIIIC 412
>UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=4; Tetrapoda|Rep: Probable ATP-dependent RNA helicase
DDX59 - Rattus norvegicus (Rat)
Length = 589
Score = 58.0 bits (134), Expect = 3e-07
Identities = 28/78 (35%), Positives = 42/78 (53%)
Frame = +1
Query: 286 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 465
Y HP ++ ++E + ++V G EV PI FE FP+ + Q +K GY+ PT
Sbjct: 168 YKEHPFIVALRDDQIETLKQQLGISVQGQEVARPIIDFEHCGFPETLNQNLKKSGYEVPT 227
Query: 466 PIQAQGWPIAMSGKI*LA 519
PIQ Q P+ + G+ LA
Sbjct: 228 PIQMQMIPVGLLGRDILA 245
>UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=34; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX59 - Homo sapiens (Human)
Length = 619
Score = 58.0 bits (134), Expect = 3e-07
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +1
Query: 268 PFNKNF-YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 444
P N ++ Y HP +L ++E + + V G EV PI FE + P+ + +K
Sbjct: 161 PLNASYVYKEHPFILNLQEDQIENLKQQLGILVQGQEVTRPIIDFEHCSLPEVLNHNLKK 220
Query: 445 MGYKEPTPIQAQGWPIAMSGKI*LA 519
GY+ PTPIQ Q P+ + G+ LA
Sbjct: 221 SGYEVPTPIQMQMIPVGLLGRDILA 245
>UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 722
Score = 57.6 bits (133), Expect = 4e-07
Identities = 33/93 (35%), Positives = 50/93 (53%)
Frame = +3
Query: 507 DLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADFG 686
D + KTGSGKTLAY +P I H+ Q P+ +G+GPI +V + E + FG
Sbjct: 179 DAIVCAKTGSGKTLAYTIPLIKHVMAQRPLSKGEGPIGIVFAPIREL-AEQINTEINKFG 237
Query: 687 XHILCS*HVCVWWWFLKESKPGTLRRGXKIVIC 785
++ V V+ ++ G L+RG +IV+C
Sbjct: 238 KYLNIR-SVAVFGGTGISNQIGALKRGTEIVVC 269
Score = 44.4 bits (100), Expect = 0.004
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNH--EVTVSGVEVHNPIQYFEEANFPDYVQ 429
+ +P +K Y P + K EV+E R V G PI+ + E
Sbjct: 93 IQYEPIHKALYVEVPDIKKLKKEEVKEIRRIELEGCIVKGKNCPKPIRTWSECGINPITM 152
Query: 430 QGVKTMGYKEPTPIQAQGWPIAMSG 504
+K + Y++P+P+Q Q P+ MSG
Sbjct: 153 DVIKALKYEKPSPVQRQAIPVIMSG 177
>UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Phaeosphaeria nodorum|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 1149
Score = 57.6 bits (133), Expect = 4e-07
Identities = 28/66 (42%), Positives = 40/66 (60%)
Frame = +3
Query: 447 GLQRTDAHSSSRLADSYVWKDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 626
G R A + + + +DL+GV KTGSGKTLA+ +P I H+ +Q P++ DGPI L+
Sbjct: 528 GYARPTAIQAQAIPIAESGRDLIGVAKTGSGKTLAFGIPMIRHVLDQRPLKPADGPIGLI 587
Query: 627 LGGLXE 644
L E
Sbjct: 588 LAPTRE 593
Score = 44.8 bits (101), Expect = 0.003
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQ 432
V +PF K+FY + + S +V + R+ + + V +V P+ + +
Sbjct: 463 VEYEPFRKDFYTEPAEITQMSAEDVADLRHELDGIKVKPDDVPRPVTKWAQMGLLQQTMD 522
Query: 433 GVKTMGYKEPTPIQAQGWPIAMSGK 507
+GY PT IQAQ PIA SG+
Sbjct: 523 VFTRVGYARPTAIQAQAIPIAESGR 547
>UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4;
Eukaryota|Rep: RNA helicase, putative - Theileria
annulata
Length = 976
Score = 56.0 bits (129), Expect = 1e-06
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXE 644
+D++G+ +TGSGKTLA++LPAI H +QP +R DG I LV+ E
Sbjct: 406 RDVIGIAETGSGKTLAFLLPAIRHALDQPSLRENDGMIVLVIAPTRE 452
Score = 51.6 bits (118), Expect = 3e-05
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = +1
Query: 241 PRLGFVSLQ--PFNKNFYDPHPTVLKRSPYEVEEYRN-NHEVTVSGVEVHNPIQYFEEAN 411
PR+ ++ PF KNFY ++ +EV+ +R N + V G + PI F +
Sbjct: 315 PRVDHTKIEYLPFRKNFYVQVSSITNMGEHEVDAFRRANGNIRVYGKKCPRPISSFSQCG 374
Query: 412 FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
PD + + ++ Y+ P PIQ Q P M G+
Sbjct: 375 LPDPILKILEKREYERPFPIQMQCIPALMCGR 406
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 56.0 bits (129), Expect = 1e-06
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXE 644
+D++GV KTGSGKTL+Y+LP + HI +Q + G+GPI LVL E
Sbjct: 426 RDMIGVAKTGSGKTLSYVLPMVRHIQDQLFPKPGEGPIGLVLSPTRE 472
Score = 33.5 bits (73), Expect = 7.5
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +1
Query: 271 FNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVKT- 444
F K+FY + E++ R + V G V P + + P+ V ++
Sbjct: 346 FRKHFYQVPFEMSTMDNRELDMLRLELDNVRARGKNVPPPFLTWGQLLMPESVMSVIQND 405
Query: 445 MGYKEPTPIQAQGWPIAMSGK 507
+G+ +P+PIQ Q PI +SG+
Sbjct: 406 LGFAKPSPIQCQAIPIVLSGR 426
>UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1072
Score = 56.0 bits (129), Expect = 1e-06
Identities = 29/94 (30%), Positives = 53/94 (56%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADF 683
+D++G+ KTGSGKT+A++LP + H+ +Q P+ +GPIA+V+ E ++ + F
Sbjct: 441 RDVIGIAKTGSGKTVAFLLPMLRHVRDQRPVSGSEGPIAVVMSPTREL-ASQIYKECQPF 499
Query: 684 GXHILCS*HVCVWWWFLKESKPGTLRRGXKIVIC 785
+ CV + E +++G ++VIC
Sbjct: 500 LKVLNIRASCCVGGSSISED-IAAMKKGAEVVIC 532
Score = 47.2 bits (107), Expect = 6e-04
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQ 432
+ +PF K FY P VL+ E E R + + + G + P++ + P
Sbjct: 357 IDYEPFRKAFYVPPVEVLEMDEEEAELVRLEMDGIKIRGQDAPKPVRNWGAFGLPQGCLD 416
Query: 433 GVKTMGYKEPTPIQAQGWPIAMSGK 507
+K G++ PT IQAQ P MSG+
Sbjct: 417 VIKHQGWETPTSIQAQAIPAIMSGR 441
>UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1;
Ostreococcus tauri|Rep: Putative RNA helicase, DRH1 -
Ostreococcus tauri
Length = 1118
Score = 55.6 bits (128), Expect = 2e-06
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Frame = +1
Query: 292 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHN----PIQYFEEANFPDYVQQGVKTMGYKE 459
P PT LKR + E++R H++++ P F++A FP +++ +K GY
Sbjct: 51 PTPT-LKRVASK-EDFRKEHQISIKNACERTRDLEPYVTFDDAKFPAALRKALKAQGYDA 108
Query: 460 PTPIQAQGWPIAMSGKI*LAYPK 528
PTPIQA+ WPI + GK +A K
Sbjct: 109 PTPIQAEAWPILLKGKDVVAIAK 131
Score = 35.5 bits (78), Expect = 1.9
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHI 578
KD+V + KTGSGKT ++LPA+ I
Sbjct: 124 KDVVAIAKTGSGKTCGFLLPALAKI 148
>UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n=2;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium falciparum (isolate 3D7)
Length = 1490
Score = 55.6 bits (128), Expect = 2e-06
Identities = 20/42 (47%), Positives = 33/42 (78%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 629
+D++ + +TGSGKTL+Y+ P I H+ +Q P+R DGPI+++L
Sbjct: 761 RDVIAIAETGSGKTLSYLFPVIRHVLHQEPLRNNDGPISIIL 802
Score = 42.7 bits (96), Expect = 0.012
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +1
Query: 268 PFNKNFYDPHPTVLKRSPYEVEEYR-NNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 444
P KN Y + +V+ +R NN + V G P+QYF + P + Q ++
Sbjct: 681 PIKKNIYVQVKEITNMKDSDVDMFRKNNGNIIVRGKNCPRPVQYFYQCGLPSKILQILEK 740
Query: 445 MGYKEPTPIQAQGWPIAMSGK 507
+K+ IQ Q P M G+
Sbjct: 741 KNFKKMYNIQMQTIPALMCGR 761
>UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 620
Score = 55.6 bits (128), Expect = 2e-06
Identities = 24/74 (32%), Positives = 41/74 (55%)
Frame = +1
Query: 286 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 465
Y HPT+ + +V++ R+ E+ V G V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 466 PIQAQGWPIAMSGK 507
PIQ Q P+ +SG+
Sbjct: 221 PIQMQVLPVLLSGR 234
>UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1;
Ostreococcus tauri|Rep: DEAD/DEAH box RNA helicase -
Ostreococcus tauri
Length = 507
Score = 54.8 bits (126), Expect = 3e-06
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXE 644
+D +G+ TGSGKTLA++LPA I+ Q P+R+ +GP+ALVL E
Sbjct: 141 RDALGLATTGSGKTLAFLLPAYAQISRQRPLRKKEGPMALVLAPTRE 187
Score = 35.1 bits (77), Expect = 2.5
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 328 VEEYRNNHEVTVSGVEVHNPIQYFEEANFPD-YVQQGVKTMGYKEPTPIQAQGWPIAMSG 504
VE R +V V G E P++ F + D + + +K +GY+ PT IQAQ P+ G
Sbjct: 82 VEARREALDVRVDG-ETRAPVERFGQGGALDVHAIRALKRLGYETPTGIQAQCIPVICGG 140
Query: 505 K 507
+
Sbjct: 141 R 141
>UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 1357
Score = 54.4 bits (125), Expect = 4e-06
Identities = 22/37 (59%), Positives = 30/37 (81%)
Frame = +3
Query: 519 VPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 629
+ +TGSGKTLAY+LP I H++ Q P++ GDGPI L+L
Sbjct: 750 IAETGSGKTLAYLLPMIRHVSAQRPLQEGDGPIGLIL 786
Score = 52.0 bits (119), Expect = 2e-05
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +1
Query: 262 LQPFNKNFYDPHPTVLKRSPYEVEEYRNN-HEVTVSGVEVHNPIQYFEEANFPDYVQQG- 435
L+ F KNFY + + + EV+ YR N E+ V G EV PI+ + ++ D + +
Sbjct: 651 LEHFQKNFYIESKEISQMTEDEVKIYRENLGEIQVKGQEVPRPIKSWLQSGLSDRILEVL 710
Query: 436 VKTMGYKEPTPIQAQGWPIAMSGK 507
++ Y +P PIQ Q P+ MSG+
Sbjct: 711 IEKKKYDKPFPIQCQSLPVIMSGR 734
>UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Ustilago maydis|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ustilago maydis (Smut fungus)
Length = 1156
Score = 54.4 bits (125), Expect = 4e-06
Identities = 19/42 (45%), Positives = 32/42 (76%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 629
+D++GV KTGSGKT+A++LP HI +Q P+ +GP+ +++
Sbjct: 514 RDIIGVAKTGSGKTMAFLLPMFRHIKDQRPVEPSEGPVGIIM 555
Score = 53.6 bits (123), Expect = 7e-06
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQ 432
+ +PFNK FY P + S + R + +TV G + P+ + P
Sbjct: 430 IDYEPFNKAFYHPPAEIQDMSEELANQIRLEMDAITVRGRDCPKPLTKWSHCGLPASCLD 489
Query: 433 GVKTMGYKEPTPIQAQGWPIAMSGK 507
+K +GY PTPIQ+Q P MSG+
Sbjct: 490 VIKRLGYSAPTPIQSQAMPAIMSGR 514
>UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n=3;
Piroplasmida|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 707
Score = 54.0 bits (124), Expect = 5e-06
Identities = 23/47 (48%), Positives = 34/47 (72%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXE 644
+D++GV +TGSGKTL ++LP ++H+ QPP+ G GPI L+L E
Sbjct: 357 RDIIGVSQTGSGKTLTFLLPGLLHLLAQPPVGTG-GPIMLILSPTRE 402
Score = 51.6 bits (118), Expect = 3e-05
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +1
Query: 262 LQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVE-VHNPIQYFEEANFPDYVQQGV 438
L K+FYD R E+E H + + G + P+ F+EA F +Q +
Sbjct: 275 LVEIKKDFYDLSYEADSRPGEEIERILKAHNIIIEGEHPLPKPVTTFDEAVFNQQIQNII 334
Query: 439 KTMGYKEPTPIQAQGWPIAMSGK 507
K + EPTPIQ GW ++G+
Sbjct: 335 KESNFTEPTPIQKVGWTSCLTGR 357
>UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 994
Score = 54.0 bits (124), Expect = 5e-06
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRN-NHEVTVSGVEVHNPIQYFEEANFPDYVQQ 432
+ QPF KNFY + +EVE +R N + V G PI F + PD +
Sbjct: 342 IDYQPFKKNFYVQISAITAMKEHEVEAFRKANGNIRVRGKYCPRPIYNFSQCGLPDPILS 401
Query: 433 GVKTMGYKEPTPIQAQGWPIAMSGKI*LA 519
++ Y++P PIQ Q P M G+ LA
Sbjct: 402 LLQRRNYEKPFPIQMQCIPALMCGRDVLA 430
Score = 52.0 bits (119), Expect = 2e-05
Identities = 21/47 (44%), Positives = 33/47 (70%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXE 644
+D++ + +TGSGKT+AY+LPAI H+ QP +R +G I L++ E
Sbjct: 426 RDVLAIAETGSGKTMAYLLPAIRHVLYQPKLRENEGMIVLIIAPTRE 472
>UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Putative RNA helicase; n=3; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Putative RNA helicase - Dictyostelium
discoideum (Slime mold)
Length = 1151
Score = 53.6 bits (123), Expect = 7e-06
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXE---S*HNKFQQVA 674
+DL+G+ +TGSGKTLA++LP HI QP G+G IAL++ E H + ++ +
Sbjct: 547 RDLIGIARTGSGKTLAFLLPMFRHILAQPKSAPGEGMIALIMSPTRELALQIHVECKKFS 606
Query: 675 ADFGXHILCS*HVCVWWWFLKESKPGTLRRGXKIVIC 785
G CV+ + L+RG IV+C
Sbjct: 607 KVLGLRT-----ACVYGGASISEQIAELKRGADIVVC 638
Score = 52.8 bits (121), Expect = 1e-05
Identities = 27/79 (34%), Positives = 43/79 (54%)
Frame = +1
Query: 271 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 450
F KNFY P + + EV ++R+ V ++G + PIQ + +A + V +K
Sbjct: 469 FQKNFYIEVPVLANMTETEVLDFRSELGVKITGKDCPKPIQSWAQAGLTEKVHLLLKKFQ 528
Query: 451 YKEPTPIQAQGWPIAMSGK 507
Y++PT IQAQ P M+G+
Sbjct: 529 YEKPTSIQAQTIPAIMNGR 547
>UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 594
Score = 53.2 bits (122), Expect = 9e-06
Identities = 26/77 (33%), Positives = 40/77 (51%)
Frame = +1
Query: 277 KNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYK 456
K + P T+L + E R +TV G +V P++ F+E F + G++ G
Sbjct: 141 KTSWRPPRTILTKDNVRHERIRRKFGITVEGEDVPPPLRSFKEMKFHKGILLGLEQKGIT 200
Query: 457 EPTPIQAQGWPIAMSGK 507
+PTPIQ QG P +SG+
Sbjct: 201 KPTPIQVQGIPAVLSGR 217
Score = 40.7 bits (91), Expect = 0.050
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVL 629
+D++G+ TGSGKTL ++LP I+ Q P R +GP L++
Sbjct: 217 RDIIGIAFTGSGKTLVFVLPLIMFCLEQEVALPFGRNEGPYGLII 261
>UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:
ENSANGP00000013118 - Anopheles gambiae str. PEST
Length = 512
Score = 53.2 bits (122), Expect = 9e-06
Identities = 26/49 (53%), Positives = 36/49 (73%), Gaps = 2/49 (4%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGD--GPIALVLGGLXE 644
+DL+G+ +TG+GKTLA++LPA++HI Q PI RG+ GP LVL E
Sbjct: 144 EDLIGIAQTGTGKTLAFLLPALIHIEGQ-PIPRGERGGPNVLVLAPTRE 191
Score = 50.8 bits (116), Expect = 5e-05
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +1
Query: 268 PFNKNFYDPHPTVLKRSPYEVEEYRN-NHEVTVSGVEVHNPIQYFEEA--NFPDYVQQGV 438
P K FY+ V P +V +R N+ + + NP+ F +A +PD +++ +
Sbjct: 63 PLVKMFYNEREEVANMRPEQVAAFREANNNIDNERKPIPNPVSEFHQAFGEYPDLMEE-L 121
Query: 439 KTMGYKEPTPIQAQGWPIAMSGK 507
+ + PTPIQAQ WPI + G+
Sbjct: 122 RKQKFTTPTPIQAQAWPILLRGE 144
>UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Candida glabrata|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 816
Score = 53.2 bits (122), Expect = 9e-06
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLGGLXE---S*HNKFQQV 671
+D++G+ KTGSGKT++Y+LP I H+ Q +R G+ GPIA++ E + + Q++
Sbjct: 290 RDVIGISKTGSGKTISYLLPMIRHVKAQKKLRNGETGPIAVIFAPTRELAVQINEEVQKL 349
Query: 672 AADFGXHILC 701
+D +C
Sbjct: 350 ISDLDISSIC 359
Score = 36.3 bits (80), Expect = 1.1
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQ 432
+ L P +K Y+ + + E+ + R + + + + G + P+ + + P + +
Sbjct: 205 IDLDPISKCLYNEPEEIKSYTEDEIADLRLDLDNIKIEGKDCPRPVTKWSQLGIPYDIIR 264
Query: 433 GVKTM-GYKEPTPIQAQGWPIAMSGK 507
+K + YK TPIQ Q P MSG+
Sbjct: 265 FIKDVFSYKSLTPIQTQTIPAIMSGR 290
>UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Magnaporthe grisea|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 674
Score = 53.2 bits (122), Expect = 9e-06
Identities = 20/54 (37%), Positives = 35/54 (64%)
Frame = +1
Query: 337 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAM 498
++ N E+ G + NP++++EE+N P ++ +K +GY EPTP+Q PIA+
Sbjct: 239 FKVNLEIVTKGNNIPNPMRFWEESNLPHVLKDTIKQVGYTEPTPVQRAAIPIAL 292
Score = 48.8 bits (111), Expect = 2e-04
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPP---IRRGDGPIALVLGGLXE 644
+DL+G+ KTGSGKT A++LP + +I PP + + +GP AL+L E
Sbjct: 295 RDLIGISKTGSGKTAAFVLPMLSYIEPLPPLNEVTKTEGPYALILAPTRE 344
>UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa
protein - Apis mellifera (Honeybee)
Length = 630
Score = 52.8 bits (121), Expect = 1e-05
Identities = 24/55 (43%), Positives = 33/55 (60%)
Frame = +1
Query: 343 NNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
+N +V VSG V PI+ FE A + V +K GYK+PTP+Q PI M+G+
Sbjct: 180 DNIQVNVSGDNVPQPIESFEAAGLRNIVLDNIKKSGYKKPTPVQKHALPIIMNGR 234
>UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_14,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 532
Score = 52.8 bits (121), Expect = 1e-05
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Frame = +1
Query: 226 SEHASPRLGFVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTV--SGVEVHNPIQYF 399
S++A P+ ++ P K F DP + + V EY + H + V + ++V P +
Sbjct: 19 SQYAKPQ---INSTPIQKVFIDPTQRIYE--DIVVSEYLDEHSIVVEQNDIQVPQPFIEW 73
Query: 400 EEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 504
++ FP+ + + + Y PTPIQA +PI MSG
Sbjct: 74 KDCQFPNQLNKRISLKAYNRPTPIQASVFPIIMSG 108
Score = 50.8 bits (116), Expect = 5e-05
Identities = 22/41 (53%), Positives = 32/41 (78%)
Frame = +3
Query: 507 DLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 629
DL+G+ +TGSGKT+AY+LP +VHI +Q R+ GP+ L+L
Sbjct: 110 DLIGIAQTGSGKTIAYLLPGLVHIESQ---RKKGGPMMLIL 147
>UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_100,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 737
Score = 52.8 bits (121), Expect = 1e-05
Identities = 20/42 (47%), Positives = 33/42 (78%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 629
++++GV KTGSGKT+AY+ P +VH++ Q + + +GPI LV+
Sbjct: 226 RNVIGVAKTGSGKTIAYVWPMLVHVSAQRAVEKKEGPIGLVV 267
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/84 (25%), Positives = 39/84 (46%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 435
+ + F NFY H + + +VE+ + +++ V G V PI F +
Sbjct: 143 IQYEEFESNFYQEHEEIANLNVAQVEKIKREYQIHVKGNNVPKPIISFGHLQLDQKLVNK 202
Query: 436 VKTMGYKEPTPIQAQGWPIAMSGK 507
+ +++PT IQ+Q P +SG+
Sbjct: 203 IVAQNFEKPTAIQSQALPCVLSGR 226
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 52.8 bits (121), Expect = 1e-05
Identities = 19/57 (33%), Positives = 37/57 (64%)
Frame = +1
Query: 337 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
+R ++ +T G ++ NPI+ +++++ P ++ + + GYKEPTPIQ Q PI + +
Sbjct: 373 FREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR 429
Score = 45.2 bits (102), Expect = 0.002
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRR----GDGPIALVLGGLXES*HNKFQQV 671
+D++GV +TGSGKT A+++P +V I P I R GP A++L E + ++
Sbjct: 429 RDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTREL-AQQIEEE 487
Query: 672 AADFGXHILCS*HVCVWWWFLKESKPGTLRRGXKIVI 782
FG + V V +E + LR G +IVI
Sbjct: 488 TIKFGKPLGIR-TVAVIGGISREDQGFRLRMGCEIVI 523
>UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53; n=2; Equus
caballus|Rep: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53 - Equus caballus
Length = 711
Score = 52.0 bits (119), Expect = 2e-05
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Frame = +1
Query: 253 FVSLQPFNKNFYDPHPTVLKRSPYEVEEYRN-NHEVTVSGVE------VHNPIQYFEEA- 408
+ L P KNFY S +V+ +R N +T ++ + NP FE+A
Sbjct: 251 WADLPPIKKNFYVESTATSSLSQVQVDAWRQENFNITCEDLKDGEKRPIPNPTCKFEDAF 310
Query: 409 -NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 504
++P+ V + +K G++ PTPIQ+Q WPI + G
Sbjct: 311 EHYPE-VLKSIKKAGFQRPTPIQSQAWPIVLQG 342
Score = 48.4 bits (110), Expect = 2e-04
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +3
Query: 438 KDNGLQRTDAHSSSRLADSYVWKDLVGVPKTGSGKTLAYILPAIVHINNQPPIR-RGDGP 614
K G QR S DL+GV +TG+GKTL+Y++P +H+++QP R +GP
Sbjct: 321 KKAGFQRPTPIQSQAWPIVLQGMDLIGVAQTGTGKTLSYLIPGFIHLDSQPISREERNGP 380
Query: 615 IALVL 629
LVL
Sbjct: 381 GMLVL 385
>UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Bos taurus|Rep:
Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-)
(DEAD box protein 43) (DEAD box protein HAGE) (Helical
antigen). - Bos Taurus
Length = 597
Score = 52.0 bits (119), Expect = 2e-05
Identities = 22/42 (52%), Positives = 34/42 (80%), Gaps = 1/42 (2%)
Frame = +3
Query: 507 DLVGVPKTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVL 629
DL+GV +TG+GKTL+Y++P +HI++QP ++R +GP LVL
Sbjct: 280 DLIGVAQTGTGKTLSYLMPGFIHIDSQPVLQRARNGPGMLVL 321
Score = 47.2 bits (107), Expect = 6e-04
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Frame = +1
Query: 253 FVSLQPFNKNFYDPHPTVLKRSPYEVEEYRN-NHEVTVSGVE------VHNPIQYFEEAN 411
+ L P KNFY S +V+ +R N+ + ++ + NP FE+A
Sbjct: 187 WAGLPPVKKNFYIESEKTSSMSQEQVDNWRKENYNIICDDLKDGEKRPLPNPTCNFEDAF 246
Query: 412 --FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 504
+P+ V + ++ G+++PTPIQ+Q WPI + G
Sbjct: 247 HCYPE-VMRNIEKAGFQKPTPIQSQAWPIILQG 278
>UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 478
Score = 52.0 bits (119), Expect = 2e-05
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +3
Query: 498 VWK--DLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXE 644
+W D + + KTGSGKTLA++LPA I+ Q P+ + +GPIALVL E
Sbjct: 89 IWSGHDALVMAKTGSGKTLAFLLPAYAQISRQRPLTKREGPIALVLAPTRE 139
>UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=7; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Leishmania major
Length = 685
Score = 52.0 bits (119), Expect = 2e-05
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 629
+DL+ KTGSGKTL Y LP I H +QP +G+GPI LVL
Sbjct: 85 RDLLLTAKTGSGKTLCYALPLIRHCADQPRCEKGEGPIGLVL 126
Score = 38.7 bits (86), Expect = 0.20
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +1
Query: 268 PFNKNFYDPHPTVLKRSPYEVEEY-RNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 444
P +FY P + + E+ E R V G +V PI+ + PD V + ++
Sbjct: 5 PIRTDFYVVPPDMTNLTAQEMRELLRELDGAKVRGQDVPRPIRSWHGTGLPDRVLEVLEE 64
Query: 445 MGYKEPTPIQAQGWPIAMSGK 507
YK P +Q+ G P MSG+
Sbjct: 65 HEYKCPFAVQSLGVPALMSGR 85
>UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=7;
Eukaryota|Rep: ATP-dependent RNA helicase abstrakt -
Drosophila melanogaster (Fruit fly)
Length = 619
Score = 52.0 bits (119), Expect = 2e-05
Identities = 28/81 (34%), Positives = 39/81 (48%)
Frame = +1
Query: 265 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 444
QP K + P + + S E E R+ + V G PI+ F E FP + G+
Sbjct: 136 QPI-KTAWKPPRYIREMSEEEREAVRHELRILVEGETPSPPIRSFREMKFPKGILNGLAA 194
Query: 445 MGYKEPTPIQAQGWPIAMSGK 507
G K PTPIQ QG P ++G+
Sbjct: 195 KGIKNPTPIQVQGLPTVLAGR 215
Score = 42.7 bits (96), Expect = 0.012
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVL 629
+DL+G+ TGSGKTL ++LP I+ Q P R +GP L++
Sbjct: 215 RDLIGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLII 259
>UniRef50_Q803D3 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 41;
n=5; Euteleostomi|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 306
Score = 51.2 bits (117), Expect = 4e-05
Identities = 23/59 (38%), Positives = 32/59 (54%)
Frame = +1
Query: 331 EEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
E R + + V G + PI+ F E FP + +G+K G PTPIQ QG P +SG+
Sbjct: 152 ERARKKYHILVEGEGIPAPIKSFREMKFPQAILKGLKKKGIVHPTPIQIQGIPTILSGR 210
Score = 36.7 bits (81), Expect = 0.81
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVL 629
+D++G+ TGSGKTL + LP I+ Q P + +GP L++
Sbjct: 210 RDMIGIAFTGSGKTLVFTLPIIMFCLEQEKRLPFCKREGPYGLII 254
>UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n=4;
Plasmodium (Vinckeia)|Rep: ATP-dependent RNA helicase,
putative - Plasmodium berghei
Length = 1312
Score = 51.2 bits (117), Expect = 4e-05
Identities = 18/42 (42%), Positives = 31/42 (73%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 629
+D++ + +TGSGKT++Y+ P I H+ +Q +R DGPI ++L
Sbjct: 607 RDIIAIAETGSGKTISYLFPLIRHVLHQDKLRNNDGPIGIIL 648
Score = 43.6 bits (98), Expect = 0.007
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +1
Query: 268 PFNKNFYDPHPTVLKRSPYEVEEYR-NNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 444
P KN Y + + +VE +R NN + V G PIQYF + P + ++
Sbjct: 527 PIKKNVYVQVSEITNMTEKDVEMFRKNNGNIVVRGKNCPRPIQYFYQCGLPGKILNILEK 586
Query: 445 MGYKEPTPIQAQGWPIAMSGK 507
+K+ IQ Q P M G+
Sbjct: 587 KNFKKMFSIQMQAIPALMCGR 607
>UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 44; n=1; Arabidopsis thaliana|Rep: Putative
DEAD-box ATP-dependent RNA helicase 44 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 622
Score = 50.8 bits (116), Expect = 5e-05
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLGGLXES*HNKFQQVA 674
+D++G+ TGSGKT A++LP + +I+ PP+R + +GP ALV+ E H + ++
Sbjct: 248 RDVIGISATGSGKTAAFVLPMLAYISRLPPMREENQTEGPYALVMVPTRELAH-QIEEET 306
Query: 675 ADFGXHILCS*HVCVWWWFLKESKPGTLRRGXKIVI 782
F ++ V + W E + L +G +IVI
Sbjct: 307 VKFSRYLGFK-AVSITGWESIEKQALKLSQGCEIVI 341
>UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX43;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX43 - Homo sapiens (Human)
Length = 648
Score = 50.8 bits (116), Expect = 5e-05
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Frame = +1
Query: 253 FVSLQPFNKNFYDPHPTVLKRSPYEVEEYRN-NHEVTVSGVE------VHNPIQYFEEAN 411
+ L P KNFY S E + +R N +T ++ + NP F++A
Sbjct: 188 WADLPPIKKNFYKESTATSAMSKVEADSWRKENFNITWDDLKDGEKRPIPNPTCTFDDAF 247
Query: 412 --FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 504
+P+ V + +K G+++PTPIQ+Q WPI + G
Sbjct: 248 QCYPE-VMENIKKAGFQKPTPIQSQAWPIVLQG 279
Score = 42.7 bits (96), Expect = 0.012
Identities = 19/42 (45%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = +3
Query: 507 DLVGVPKTGSGKTLAYILPAIVHINNQPPIR-RGDGPIALVL 629
DL+GV +TG+GKTL Y++P +H+ QP ++ + + P LVL
Sbjct: 281 DLIGVAQTGTGKTLCYLMPGFIHLVLQPSLKGQRNRPGMLVL 322
>UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to vasa-like protein - Nasonia vitripennis
Length = 732
Score = 50.4 bits (115), Expect = 6e-05
Identities = 23/52 (44%), Positives = 31/52 (59%)
Frame = +1
Query: 352 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
EV SG +V PI F+EAN + +K GY +PTP+Q G PI +SG+
Sbjct: 289 EVKTSGEDVPPPISSFDEANLRVLLNTNIKKSGYTKPTPVQKYGIPILLSGR 340
>UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 440
Score = 50.4 bits (115), Expect = 6e-05
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = +3
Query: 507 DLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXE 644
D+VG+ TGSGKTLA+ +PA+ I++QPP + G PI LVL E
Sbjct: 66 DMVGIAATGSGKTLAFGMPALTQIHSQPPCKPGQ-PICLVLAPTRE 110
Score = 39.5 bits (88), Expect = 0.11
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 316 SPYEVEEYRNNHEVT-VSGVEVH-NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWP 489
S EV+ R+ VT V G+ P+ F +A F + + T +K P+PIQAQ WP
Sbjct: 2 SASEVQAARDALAVTQVDGLSTDLAPVSSFADAGFSKELLR--VTAQFKTPSPIQAQSWP 59
Query: 490 IAMSG 504
I MSG
Sbjct: 60 IIMSG 64
>UniRef50_Q9W3Y5 Cluster: Putative ATP-dependent RNA helicase
CG14443; n=1; Drosophila melanogaster|Rep: Putative
ATP-dependent RNA helicase CG14443 - Drosophila
melanogaster (Fruit fly)
Length = 438
Score = 50.4 bits (115), Expect = 6e-05
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +1
Query: 337 YRNNHEVTVSGVEVHN---PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
YR H +T++ + N P+ FE + F + Q ++ GY PTPIQAQ W IA GK
Sbjct: 11 YRKRHNITLTSWNMRNLPEPVLSFERSGFNATILQQLEDQGYDGPTPIQAQTWSIAKEGK 70
Score = 38.7 bits (86), Expect = 0.20
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 402 RSKFS*LCATRCKDNGLQRTDAHSSSRLADSYVWKDLVGVPKTGSGKTLAYILPAIVHIN 581
RS F+ + +D G + + + K++V + G+GKTL Y+LP I+ ++
Sbjct: 36 RSGFNATILQQLEDQGYDGPTPIQAQTWSIAKEGKNIVMISGKGTGKTLGYLLPGIMKMH 95
Query: 582 NQPPI-RRGDGPIALVL 629
NQ + + GPI L+L
Sbjct: 96 NQRGLMQHKKGPIVLIL 112
>UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6;
Plasmodium|Rep: Snrnp protein, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1123
Score = 50.0 bits (114), Expect = 8e-05
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLGGLXES*HNKFQQVA 674
+DL+G+ +TGSGKT A++LP + ++ PP+ DGP ALV+ E +++
Sbjct: 736 RDLIGIAETGSGKTAAFVLPMLSYVKQLPPLTYETSQDGPYALVIAPSRELAIQIYEE-T 794
Query: 675 ADFGXHILCS*HVCVWWWFLKESKPGTLRRGXKIVI 782
F + C V V E++ LRRG +IVI
Sbjct: 795 NKFASYCSCR-TVAVVGGRNAEAQAFELRRGVEIVI 829
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/54 (37%), Positives = 35/54 (64%)
Frame = +1
Query: 337 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAM 498
+R ++E+ + G V PI+ +EE+N + + + +K Y++PTPIQ Q PIA+
Sbjct: 680 FREDNEIYIKGGVVPPPIRKWEESNLSNDLLKAIKKAKYEKPTPIQMQAIPIAL 733
>UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 487
Score = 50.0 bits (114), Expect = 8e-05
Identities = 22/74 (29%), Positives = 37/74 (50%)
Frame = +1
Query: 286 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 465
+ P +L ++E R + V G ++ P++ F+E FP + +K G PT
Sbjct: 12 WTPPRYILHMPKEKIERIRKKWHILVEGDDIPPPVKTFKEMKFPRPILAALKKKGITHPT 71
Query: 466 PIQAQGWPIAMSGK 507
PIQ QG P ++G+
Sbjct: 72 PIQVQGLPAVLTGR 85
Score = 38.7 bits (86), Expect = 0.20
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVL 629
+D++G+ TGSGKTL + LP I+ Q P +R +GP +++
Sbjct: 85 RDMIGIAFTGSGKTLVFTLPIIMFSLEQEKAMPFQRNEGPYGMIV 129
>UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 604
Score = 50.0 bits (114), Expect = 8e-05
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Frame = +1
Query: 328 VEEYRNNHEVTVSG--VEVHNPIQYFEEAN-FPDYVQQGVKTMGYKEPTPIQAQGWPIAM 498
++EYR H + + V V +PI FE+ FP + + G+K PT IQAQGW IA+
Sbjct: 110 IKEYRAQHNIFIRSQHVTVPDPIMRFEDVQCFPQMLMDLLLKAGFKGPTAIQAQGWSIAL 169
Query: 499 SG 504
+G
Sbjct: 170 TG 171
Score = 46.4 bits (105), Expect = 0.001
Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Frame = +3
Query: 507 DLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXE---S*HNKFQQVAA 677
DL+G+ +TGSGKTLA++LPAIVHI Q R P L+L E +++FQ+ +
Sbjct: 173 DLIGIAQTGSGKTLAFLLPAIVHILAQ---ARSHDPKCLILAPTRELTLQIYDQFQKFSV 229
Query: 678 DFGXHILCS*HVCVWWWFLKESKPGTLRRGXKIVI-CYXQVD*LDFFGKGAQT 833
G + + C++ + + LR+G +I+I C ++ +D +G T
Sbjct: 230 --GSQLYAA---CLYGGQDRYIQKSQLRKGPQILIACPGRL--IDLLDQGCTT 275
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 49.6 bits (113), Expect = 1e-04
Identities = 17/57 (29%), Positives = 38/57 (66%)
Frame = +1
Query: 337 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
++ + ++ G NPI+ ++E+N P + + ++ +GY++P+PIQ Q PI+++G+
Sbjct: 395 FKEDFNISTKGGIAPNPIRTWQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGR 451
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
Frame = +3
Query: 492 SYVWKDLVGVPKTGSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLGGLXE 644
S +D++G+ +TGSGKT A+++P +++I+ QP + + DGP ALV+ E
Sbjct: 447 SLTGRDILGIAETGSGKTCAFVIPMLIYISKQPRLTKDTEADGPYALVMAPTRE 500
>UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 411
Score = 49.6 bits (113), Expect = 1e-04
Identities = 23/57 (40%), Positives = 34/57 (59%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVA 674
+D++G+ +TGSGKTLAY LP + + + P GD P+AL+L E F V+
Sbjct: 78 RDIIGLAETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQVFMNVS 134
Score = 45.6 bits (103), Expect = 0.002
Identities = 22/76 (28%), Positives = 38/76 (50%)
Frame = +1
Query: 280 NFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKE 459
++YD + V + S V+E R + + + G + PI+ F + N P + + ++
Sbjct: 3 SYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKNFQV 62
Query: 460 PTPIQAQGWPIAMSGK 507
PTPIQ Q MSG+
Sbjct: 63 PTPIQMQSLSCVMSGR 78
>UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5;
Eukaryota|Rep: ATP-dependent RNA helicase vasa -
Drosophila melanogaster (Fruit fly)
Length = 661
Score = 49.6 bits (113), Expect = 1e-04
Identities = 24/55 (43%), Positives = 31/55 (56%)
Frame = +1
Query: 343 NNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
NN V V+G +V PIQ+F A+ D + V GYK PTPIQ P+ SG+
Sbjct: 229 NNIPVKVTGSDVPQPIQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGR 283
>UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A;
n=50; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
35A - Oryza sativa subsp. japonica (Rice)
Length = 627
Score = 49.6 bits (113), Expect = 1e-04
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Frame = +1
Query: 229 EHASPRLGFVSLQPFNKN--FYDP------HPTVLKRSPY-EVEEYRNNHEVTVSGVEVH 381
EH S R +S++ K + DP P L+R P + +E R + V G +V
Sbjct: 119 EHLSDRKTLMSVRELAKGITYSDPLKTGWKPPLRLRRMPRAKADELRRKWHILVDGDDVP 178
Query: 382 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
P + F + P+ + + ++ G +PTPIQ QG P+ +SG+
Sbjct: 179 PPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGR 220
Score = 39.1 bits (87), Expect = 0.15
Identities = 18/45 (40%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAI-VHINNQ--PPIRRGDGPIALVL 629
+D++G+ TGSGKTL ++LP I V + + PI G+GP +++
Sbjct: 220 RDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMII 264
>UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase
PRP28, putative; n=2; Eukaryota|Rep: Pre-mRNA splicing
factor RNA helicase PRP28, putative - Plasmodium vivax
Length = 1006
Score = 49.2 bits (112), Expect = 1e-04
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLGGLXES*HNKFQQVA 674
+DL+G+ +TGSGKT A++LP + ++ PP+ DGP AL++ E F +
Sbjct: 619 RDLIGIAETGSGKTAAFVLPMLAYVKQLPPLTYETSQDGPYALIIAPSRELAIQIFDE-T 677
Query: 675 ADFGXHILCS*HVCVWWWFLKESKPGTLRRGXKIVI 782
F + C V V E++ LR+G +I+I
Sbjct: 678 NKFASYCSCR-TVAVVGGRNAEAQAFELRKGVEIII 712
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/54 (37%), Positives = 34/54 (62%)
Frame = +1
Query: 337 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAM 498
+R ++E+ + G V PI+ +EE+N + + +K Y++PTPIQ Q PIA+
Sbjct: 563 FREDNEIYIKGGIVPPPIRRWEESNLSSDLLKAIKKAKYEKPTPIQMQAIPIAL 616
>UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 640
Score = 49.2 bits (112), Expect = 1e-04
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 268 PFNKNFYDPHPTVLKRSPYEVEEYRNN-HEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 444
P KN Y P + +S ++E+ R + V G+ V PI + + P + ++
Sbjct: 59 PIRKNIYIPSSEISSKSQTDIEDLRKRLGNIVVHGLNVLCPIVNWTDCGLPAPLMSHLRL 118
Query: 445 MGYKEPTPIQAQGWPIAMSGK 507
G+K+PT IQ Q P +SG+
Sbjct: 119 RGFKQPTSIQCQAIPCILSGR 139
Score = 43.6 bits (98), Expect = 0.007
Identities = 16/30 (53%), Positives = 24/30 (80%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPP 593
+D++G TGSGKTLA+I+P ++H+ QPP
Sbjct: 139 RDIIGCAVTGSGKTLAFIIPCLLHVLAQPP 168
>UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Takifugu
rubripes|Rep: Probable ATP-dependent RNA helicase DDX43
(EC 3.6.1.-) (DEAD box protein 43) (DEAD box protein
HAGE) (Helical antigen). - Takifugu rubripes
Length = 510
Score = 48.8 bits (111), Expect = 2e-04
Identities = 22/42 (52%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = +3
Query: 507 DLVGVPKTGSGKTLAYILPAIVHINNQP-PIRRGDGPIALVL 629
DL+ + +TG+GKTLAY+LP +H+N QP P +GP LVL
Sbjct: 114 DLIAIAQTGTGKTLAYLLPGFIHMNGQPVPKCERNGPGMLVL 155
Score = 45.2 bits (102), Expect = 0.002
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Frame = +1
Query: 262 LQPFNKNFYDPHPTVLKRSPYEVEEYRN---NHEVTVSGVE-------VHNPIQYFEEAN 411
L P K FY ++ P EV ++R N+ + V ++ + P + F EA
Sbjct: 21 LPPIKKQFYIEAESLSALMPEEVNQWRQAKENNNIFVDDLKKEGEKRPIPKPCRTFLEA- 79
Query: 412 FPDY--VQQGVKTMGYKEPTPIQAQGWPIAMSG 504
F Y + VK G+ PTPIQ+Q WP+ +SG
Sbjct: 80 FQHYTEIMDNVKHAGFVNPTPIQSQAWPVLLSG 112
>UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 573
Score = 48.8 bits (111), Expect = 2e-04
Identities = 27/59 (45%), Positives = 35/59 (59%)
Frame = +3
Query: 507 DLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADF 683
D++G+ KTGSGKTL++ILPAI HI QP GP LV+ E N+ Q A +
Sbjct: 178 DMLGISKTGSGKTLSFILPAIEHILAQPRQSYYPGPSVLVVAPTREL-ANQINQEAEQY 235
Score = 35.9 bits (79), Expect = 1.4
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +1
Query: 385 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 504
PI E F ++ + +++PTP+Q+ GWPIA+SG
Sbjct: 138 PIDTIESVPFQSTIKNFLSKK-FEKPTPVQSLGWPIALSG 176
>UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase prp28; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase prp28 -
Schizosaccharomyces pombe (Fission yeast)
Length = 662
Score = 48.8 bits (111), Expect = 2e-04
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 3/50 (6%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGD---GPIALVLGGLXE 644
KDL+G+ +TGSGKT A+I+P I+ I+ PP+ + GP A+VL E
Sbjct: 287 KDLIGIAETGSGKTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRE 336
Score = 42.3 bits (95), Expect = 0.016
Identities = 16/56 (28%), Positives = 34/56 (60%)
Frame = +1
Query: 340 RNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
+ ++ +++ G ++ NP++ +EEA P + + +K + YKEP+ IQ P+ + K
Sbjct: 232 KEDYNISIKGDDLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRK 287
>UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;
n=2; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 35 - Arabidopsis thaliana (Mouse-ear cress)
Length = 591
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/74 (31%), Positives = 40/74 (54%)
Frame = +1
Query: 286 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 465
+ P + K S + + R + V+G ++ PI+ F++ FP V +K G +PT
Sbjct: 111 WKPPLHIRKMSSKQRDLIRKQWHIIVNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPT 170
Query: 466 PIQAQGWPIAMSGK 507
PIQ QG P+ ++G+
Sbjct: 171 PIQVQGLPVILAGR 184
Score = 42.3 bits (95), Expect = 0.016
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVL 629
+D++G+ TGSGKTL ++LP I+ + PI G+GPI L++
Sbjct: 184 RDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIV 228
>UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2;
Magnoliophyta|Rep: Isoform 2 of Q5VQL1 - Oryza sativa
subsp. japonica (Rice)
Length = 759
Score = 48.0 bits (109), Expect = 3e-04
Identities = 34/93 (36%), Positives = 45/93 (48%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADF 683
+D+V V KTGSGKTL Y++P + + R DGP LVL E + Q A F
Sbjct: 269 RDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSR-DGPTVLVLSPTREL-ATQIQDEAKKF 326
Query: 684 GXHILCS*HVCVWWWFLKESKPGTLRRGXKIVI 782
G S VC++ K + L RG IV+
Sbjct: 327 GRSSRIS-SVCLYGGAPKGPQLRDLERGADIVV 358
Score = 35.9 bits (79), Expect = 1.4
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 412 FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LAYPK 528
F + V+ G+ PTPIQAQ WPIA+ + +A K
Sbjct: 238 FKSTIYVKVQQAGFSAPTPIQAQSWPIALRNRDIVAVAK 276
>UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep:
LOC562123 protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 483
Score = 48.0 bits (109), Expect = 3e-04
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +1
Query: 277 KNF-YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGY 453
KN+ Y + + + ++E + + G EV P+ F+ FP +++ +K GY
Sbjct: 131 KNYCYKQDAFISELTEEQIERVKAELGIVSVGTEVCRPVIEFQHCRFPTVLEKNLKVAGY 190
Query: 454 KEPTPIQAQGWPIAMSGK 507
+ PTP+Q Q P+ ++G+
Sbjct: 191 EAPTPVQMQMVPVGLTGR 208
>UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3;
Piroplasmida|Rep: DEAD-family helicase, putative -
Theileria annulata
Length = 757
Score = 48.0 bits (109), Expect = 3e-04
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLGGLXES*HNKFQQVA 674
+DL+G+ TGSGKT A++LP + ++ PP+ DGP AL+L E + +
Sbjct: 377 RDLIGIAVTGSGKTAAFVLPMLTYVKKLPPLDDETSLDGPYALILAPSRELALQIYDE-T 435
Query: 675 ADFGXHILCS*HVCVWWWFLKESKPGTLRRGXKIVI 782
F C V V ES+ LR+G +I+I
Sbjct: 436 VKFSAFCSCR-SVAVVGGRNAESQAFELRKGCEIII 470
Score = 44.0 bits (99), Expect = 0.005
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = +1
Query: 337 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAM 498
+R + E+ + G V PI+ + E+ P + + +K GY +PTPIQ Q PIA+
Sbjct: 321 FREDFEIYIKGGRVPPPIRTWAESPLPWELLEAIKKAGYIKPTPIQMQAIPIAL 374
>UniRef50_Q240I5 Cluster: DEAD/DEAH box helicase family protein;
n=2; Oligohymenophorea|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 749
Score = 47.6 bits (108), Expect = 4e-04
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +1
Query: 337 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
+R ++++ + G V P++ +EE P Y+ V+ Y++PTPIQ Q PI + K
Sbjct: 305 FREDNDIIIKGGRVPKPMRTWEEGELPPYILDAVRRSKYEKPTPIQMQTIPIGLQRK 361
Score = 47.2 bits (107), Expect = 6e-04
Identities = 20/45 (44%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRR---GDGPIALVL 629
KDL+G+ +TG+GKT A+++P I ++ + PP+ DGP AL+L
Sbjct: 361 KDLIGISQTGTGKTCAFLIPLITYLRSLPPMDEEIAKDGPYALIL 405
>UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 872
Score = 47.2 bits (107), Expect = 6e-04
Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLGGLXE 644
+DL+G+ KTGSGKT++YILP + I Q + + + GP+ L+L E
Sbjct: 315 RDLIGISKTGSGKTISYILPMLRQIKAQRTLSKNETGPLGLILAPTRE 362
Score = 42.7 bits (96), Expect = 0.012
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +1
Query: 262 LQPFNKNFYDPHPTVLKRSPYEVEEYRNN-HEVTVSGVEVHNPIQYFEEANFP-DYVQQG 435
L+PF K+FY V + EVEE R + + V G I + + P D +
Sbjct: 232 LEPFPKSFYSEPDEVKLMTDDEVEEMRLSLGGIKVKGKHCPKLITRWSQLGLPTDIMNLI 291
Query: 436 VKTMGYKEPTPIQAQGWPIAMSGK 507
K + Y EPT IQ+Q P MSG+
Sbjct: 292 TKELKYDEPTAIQSQAIPAIMSGR 315
>UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 738
Score = 47.2 bits (107), Expect = 6e-04
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 3/50 (6%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLGGLXE 644
+DL+GV KTGSGKT A+++P + +I + PP+ R GP AL++ E
Sbjct: 353 RDLIGVAKTGSGKTAAFVIPMLDYIGHLPPLNDDNRHLGPYALIMAPTRE 402
Score = 44.0 bits (99), Expect = 0.005
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +1
Query: 337 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
+R + + G + +P++ + E+ P + ++ +GYKEP+PIQ Q PI M +
Sbjct: 297 FREDFSIAARGGGIPHPLRNWRESAIPSQILDIIEEIGYKEPSPIQRQAIPIGMQNR 353
>UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomyces cerevisiae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 849
Score = 46.8 bits (106), Expect = 8e-04
Identities = 19/48 (39%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLGGLXE 644
+D++G+ KTGSGKT++Y+LP + + Q P+ + + GP+ L+L E
Sbjct: 294 RDVIGISKTGSGKTISYLLPLLRQVKAQRPLSKHETGPMGLILAPTRE 341
Score = 44.0 bits (99), Expect = 0.005
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +1
Query: 262 LQPFNKNFYDPHPTVLKRSPYEVEEYR-NNHEVTVSGVEVHNPIQYFEEANF-PDYVQQG 435
L+PF KNFY TV S EVEE R + + + G P+ + + D +
Sbjct: 211 LEPFQKNFYIESETVSSMSEMEVEELRLSLDNIKIKGTGCPKPVTKWSQLGLSTDTMVLI 270
Query: 436 VKTMGYKEPTPIQAQGWPIAMSGK 507
+ + + TPIQ+Q P MSG+
Sbjct: 271 TEKLHFGSLTPIQSQALPAIMSGR 294
>UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=16; Pezizomycotina|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Coccidioides immitis
Length = 817
Score = 46.8 bits (106), Expect = 8e-04
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPI-----RRGDGPIALVLGGLXE 644
+DL+GV TGSGKT A++LP +V+I P + R+ DGP A++L E
Sbjct: 415 RDLIGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAIILAPTRE 466
Score = 41.1 bits (92), Expect = 0.038
Identities = 15/57 (26%), Positives = 33/57 (57%)
Frame = +1
Query: 337 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
++ + ++ G + NP++ + E+ P + + + +GYK+P+PIQ PIA+ +
Sbjct: 359 FKEDFNISTKGGSIPNPMRSWGESGLPKRLLEIIDKVGYKDPSPIQRAAIPIALQNR 415
>UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat).
ROK1-like protein; n=2; Dictyostelium discoideum|Rep:
Similar to Rattus norvegicus (Rat). ROK1-like protein -
Dictyostelium discoideum (Slime mold)
Length = 668
Score = 46.4 bits (105), Expect = 0.001
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = +1
Query: 274 NKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFE--EANFP--DYVQQGVK 441
NKN T + E+ +RN H + V G ++ +P+ F E F Y+ +
Sbjct: 156 NKNKKVSKETQEDKHKREIATFRNKHRIKVDGTDIPDPMTEFSQLENRFKVRKYLLNNIN 215
Query: 442 TMGYKEPTPIQAQGWPIAM 498
+GYKEP+PIQ Q PI +
Sbjct: 216 EIGYKEPSPIQMQVIPILL 234
>UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n=6;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium vivax
Length = 717
Score = 46.4 bits (105), Expect = 0.001
Identities = 26/61 (42%), Positives = 36/61 (59%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADF 683
KDL+GV +TGSGKTLA+ LPA++HI Q R G + GL + ++ +Q D
Sbjct: 315 KDLIGVAETGSGKTLAFALPALMHILKQREGERKSGRES----GLENAREHRLEQNQEDM 370
Query: 684 G 686
G
Sbjct: 371 G 371
Score = 39.5 bits (88), Expect = 0.11
Identities = 23/61 (37%), Positives = 31/61 (50%)
Frame = +1
Query: 325 EVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 504
+ E R N V+ ++N F E NF + V + +KEPT IQ WPIA+SG
Sbjct: 256 DAELKRLNIYVSKESALLNNLASSFSEVNFHEAVVNHLNAK-FKEPTAIQKVTWPIALSG 314
Query: 505 K 507
K
Sbjct: 315 K 315
>UniRef50_A2D755 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 1123
Score = 46.4 bits (105), Expect = 0.001
Identities = 22/51 (43%), Positives = 32/51 (62%)
Frame = +3
Query: 492 SYVWKDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXE 644
+Y +DL+G+ KTGSGKT +YI+PAI H+ Q +GP L++ E
Sbjct: 776 AYAGRDLIGIAKTGSGKTASYIIPAIKHVMLQ---NGREGPHVLIIAPTKE 823
>UniRef50_P23394 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=3; Saccharomycetaceae|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 588
Score = 46.4 bits (105), Expect = 0.001
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 4/52 (7%)
Frame = +3
Query: 501 WKDLVGVPKTGSGKTLAYILPAIVHINNQPP----IRRGDGPIALVLGGLXE 644
++D +GV TGSGKTLA+++P ++ ++ PP ++ DGP AL+L E
Sbjct: 214 YRDFLGVASTGSGKTLAFVIPILIKMSRSPPRPPSLKIIDGPKALILAPTRE 265
>UniRef50_UPI0000E48927 Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase, partial; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD box ATP-dependent RNA helicase, partial -
Strongylocentrotus purpuratus
Length = 57
Score = 46.0 bits (104), Expect = 0.001
Identities = 17/30 (56%), Positives = 26/30 (86%)
Frame = +3
Query: 507 DLVGVPKTGSGKTLAYILPAIVHINNQPPI 596
DL+G+ +TGSGKTLA++LPA++H + QP +
Sbjct: 5 DLIGIAQTGSGKTLAFLLPALIHTDLQPGV 34
>UniRef50_Q00YB7 Cluster: RNA helicase, DRH1; n=1; Ostreococcus
tauri|Rep: RNA helicase, DRH1 - Ostreococcus tauri
Length = 162
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Frame = +1
Query: 334 EYRNNHEVTVS---GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIA 495
E+R +E++V G+ +P+ F++ +P + VK GY+ PT IQ+Q WPIA
Sbjct: 102 EFRKRNEISVRAPPGLTTPDPMTSFDQGPWPPALLDAVKRAGYEAPTGIQSQSWPIA 158
>UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 586
Score = 46.0 bits (104), Expect = 0.001
Identities = 22/57 (38%), Positives = 28/57 (49%)
Frame = +1
Query: 334 EYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 504
E+R H V + G NP Q F + FP Q + G+ PT IQ Q WPI + G
Sbjct: 93 EWRKKHNVLIEGKSQPNPFQKFTDYEFPRMFQHIFQ--GFTAPTVIQGQSWPIILGG 147
Score = 40.7 bits (91), Expect = 0.050
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +3
Query: 507 DLVGVPKTGSGKTLAYILPAIVHINNQPP-IRRGDGPIALVLGGLXE 644
DLVG+ TGSGKTLA++LPA++ I + P G P+ LV+ E
Sbjct: 149 DLVGLAATGSGKTLAFLLPALLKIISLPKRPSYGATPLVLVMAPTRE 195
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 45.6 bits (103), Expect = 0.002
Identities = 21/36 (58%), Positives = 23/36 (63%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 504
FE NF V GV+ GYKEPTPIQAQ P M+G
Sbjct: 3 FESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAG 38
>UniRef50_Q752X1 Cluster: AFR452Cp; n=1; Eremothecium gossypii|Rep:
AFR452Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 287
Score = 45.6 bits (103), Expect = 0.002
Identities = 24/50 (48%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPP---IRRGDGPIALVLGGLXE 644
+D VGV TGSGKTLA++LP + P + R DGP ALVL E
Sbjct: 195 RDYVGVAATGSGKTLAFLLPIFAKLGRMAPLNAVTRQDGPRALVLAPTRE 244
>UniRef50_UPI0000498E70 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 558
Score = 45.2 bits (102), Expect = 0.002
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Frame = +3
Query: 435 CKDNGLQRTDAHSS-SRLADSYVWKDLVGVPKTGSGKTLAYILPAIVHI-NNQPPIRRGD 608
C+D +T +H + + + KD + +TGSGKTLAY+LP I I N P ++R D
Sbjct: 22 CEDKLQVKTYSHVQYAAIPEILQEKDCLVKAQTGSGKTLAYLLPTITMILNKHPKLKRTD 81
Query: 609 GPIALVL 629
G L+L
Sbjct: 82 GLFCLIL 88
>UniRef50_Q8AYI1 Cluster: Vasa-like protein; n=1; Squalus
acanthias|Rep: Vasa-like protein - Squalus acanthias
(Spiny dogfish)
Length = 358
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +1
Query: 355 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
V VSG V I F+EA+ D + + + GY +PTP+Q G PI +SG+
Sbjct: 231 VDVSGFNVPPAILSFDEAHLCDTLSKNINKAGYLKPTPVQKHGIPIILSGR 281
>UniRef50_Q4SWK6 Cluster: Chromosome 12 SCAF13614, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 12 SCAF13614, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1027
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/43 (46%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVL 629
+D + +TGSGKTL+Y +P + + QP + RGDGP+AL+L
Sbjct: 118 RDALVRSQTGSGKTLSYAIPVVQSLQALQPKVSRGDGPLALIL 160
>UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;
n=8; Viridiplantae|Rep: DEAD-box ATP-dependent RNA
helicase 21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 733
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 3/50 (6%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLGGLXE 644
+D++G+ +TGSGKT A++LP + +I+ PP+ +GP A+V+ E
Sbjct: 351 RDVIGIAETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRE 400
Score = 37.9 bits (84), Expect = 0.35
Identities = 14/54 (25%), Positives = 30/54 (55%)
Frame = +1
Query: 337 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAM 498
+R + ++ G + P++ +EE+ + + V+ GYK+P+PIQ P+ +
Sbjct: 295 FREDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGL 348
>UniRef50_Q23WN3 Cluster: Helicase conserved C-terminal domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Helicase conserved C-terminal domain
containing protein - Tetrahymena thermophila SB210
Length = 602
Score = 44.8 bits (101), Expect = 0.003
Identities = 19/46 (41%), Positives = 33/46 (71%), Gaps = 4/46 (8%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIV----HINNQPPIRRGDGPIALVL 629
+D++G+ TG GKT+ ++LPA+V H N P+ RG+GP+A+++
Sbjct: 174 RDMIGIAPTGQGKTIVFLLPALVMAIEHEMNM-PLFRGEGPLAIII 218
>UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_36,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 813
Score = 44.8 bits (101), Expect = 0.003
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXE 644
+D++ + +TGSGKTLAY LP I+H QP + GP LVL E
Sbjct: 470 RDVIAIAETGSGKTLAYALPGIIHSQAQPKVL---GPRILVLAPTRE 513
>UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_146,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 566
Score = 44.8 bits (101), Expect = 0.003
Identities = 19/45 (42%), Positives = 31/45 (68%), Gaps = 3/45 (6%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVL 629
+D++GV +G GKTL ++LPA++ + P+ RG+GP AL+L
Sbjct: 155 RDIIGVAPSGQGKTLVFLLPALLQCIEEEMKMPVIRGEGPFALIL 199
Score = 39.5 bits (88), Expect = 0.11
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +1
Query: 322 YEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMS 501
Y++++ + + + G + PI+ F++ + + + M K+PTPIQ QG P +
Sbjct: 94 YKIDKILKKYSIMIEGNDPPPPIKSFQDLRVDHRILKILSKMKIKKPTPIQMQGLPAVLM 153
Query: 502 GK 507
G+
Sbjct: 154 GR 155
>UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomycetaceae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 816
Score = 44.8 bits (101), Expect = 0.003
Identities = 22/49 (44%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGD--GPIALVLGGLXE 644
+D++G+ KTGSGKT+++ILP + I Q P+ GD GP+ L+L E
Sbjct: 275 RDVIGISKTGSGKTVSFILPLLRQIKAQRPL-GGDETGPLGLILSPTRE 322
Score = 43.2 bits (97), Expect = 0.009
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +1
Query: 262 LQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGV 438
L+PF KNFY + K S EV + R + + V V G + PI + + + +
Sbjct: 192 LKPFIKNFYQEPEEISKLSEEEVADLRLSLDNVQVRGRDCPRPILKWSQLGLNSGIMNLL 251
Query: 439 -KTMGYKEPTPIQAQGWPIAMSGK 507
+ + + PTPIQAQ P MSG+
Sbjct: 252 TRELEFTVPTPIQAQAIPAIMSGR 275
>UniRef50_A2YDM1 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 925
Score = 44.4 bits (100), Expect = 0.004
Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Frame = +3
Query: 495 YVWKDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGD--GPIALVL 629
Y+ KD++ KTG+GKT+A++LPAI ++ PPI R PI++V+
Sbjct: 490 YIGKDVLAKAKTGTGKTVAFLLPAIEVVSKLPPIDRDQKRPPISVVV 536
>UniRef50_Q6CDS6 Cluster: ATP-dependent RNA helicase ROK1; n=1;
Yarrowia lipolytica|Rep: ATP-dependent RNA helicase ROK1
- Yarrowia lipolytica (Candida lipolytica)
Length = 547
Score = 44.4 bits (100), Expect = 0.004
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +1
Query: 298 PTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEA----NFPDYVQQGVKTMGYKEPT 465
P + +P E +RN H++ ++G + PI FE+ N Y+ +K Y +PT
Sbjct: 76 PPPIISTPEEAVVFRNKHKINITGEDSPLPIGSFEDLITRFNLHPYLLANLKKNKYTDPT 135
Query: 466 PIQAQGWPIAMSGK 507
PIQ + P ++G+
Sbjct: 136 PIQCESIPTMLNGR 149
>UniRef50_Q4UDY7 Cluster: RNA helicase, putative; n=2;
Theileria|Rep: RNA helicase, putative - Theileria
annulata
Length = 628
Score = 44.0 bits (99), Expect = 0.005
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEAN--FPDYVQ 429
+S + + KN Y P V S E ++ + G V PI F + P +
Sbjct: 91 LSTKDYVKNIYIPDEEVDSMSLEECVNFKKRFNIETFGTRVPKPISSFIHISKSIPPTIL 150
Query: 430 QGVKTMGYKEPTPIQAQGWPIAMSGK 507
++ MG+ EPTP+Q+Q P + G+
Sbjct: 151 NRIEKMGFYEPTPVQSQVIPCILQGR 176
>UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;
Cryptosporidium|Rep: U5 snRNP 100 kD protein, putative -
Cryptosporidium parvum Iowa II
Length = 529
Score = 44.0 bits (99), Expect = 0.005
Identities = 18/50 (36%), Positives = 33/50 (66%), Gaps = 3/50 (6%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLGGLXE 644
+D++G+ +TGSGKT+A+++P I ++ N+P + +GP L+L E
Sbjct: 180 RDMIGIAETGSGKTIAFLIPLISYVGNKPILDYKTSQEGPYGLILAPARE 229
Score = 43.6 bits (98), Expect = 0.007
Identities = 17/54 (31%), Positives = 35/54 (64%)
Frame = +1
Query: 337 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAM 498
+R ++ + V G +V NPI+ +++ + + + ++ +GY++PTPIQ Q PI +
Sbjct: 124 FREDYSINVRGKDVPNPIRNWKDCHVLEIQTELIRNIGYEKPTPIQMQCIPIGL 177
>UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=2; Saccharomycetaceae|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 580
Score = 44.0 bits (99), Expect = 0.005
Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +1
Query: 337 YRNNHEVTVSGVEVHNPIQYFEEANFP-DYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
++ ++ +T G ++ NP++ + E+ P + +K +GY PTPIQ P+A++G+
Sbjct: 136 FKEDYNITSKGGDIENPLRCWAESKLPAKLLNILIKNLGYDSPTPIQRASIPLALNGR 193
Score = 36.7 bits (81), Expect = 0.81
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHI 578
+D+VG+ +TGSGKTLA++LP +I
Sbjct: 193 RDIVGIAETGSGKTLAFLLPLFSYI 217
>UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 504
Score = 43.6 bits (98), Expect = 0.007
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +3
Query: 438 KDNGLQRTDAHSSSRLADSYVWKDLVGVPKTGSGKTLAYILPAIVHINNQ 587
+ NG ++ S +D +GV +TGSGKTLA++LPA++HI+ Q
Sbjct: 100 RKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQ 149
Score = 39.1 bits (87), Expect = 0.15
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Frame = +1
Query: 253 FVSLQPFNKNFYDPHPTVLKRSPYEVEE-YRNNHEVTV------SGVEVHNPIQYFEEAN 411
F ++P ++ Y SP +++E Y N + V S V++ P+ FE+A
Sbjct: 30 FSWMKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAF 89
Query: 412 FPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGK 507
+ G ++ G+++P+PIQ+Q WP+ +SG+
Sbjct: 90 GSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQ 122
>UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Yarrowia lipolytica (Candida lipolytica)
Length = 575
Score = 43.6 bits (98), Expect = 0.007
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 355 VTVSGVEVHNPIQYFEEAN-FPDYVQQGVKTMGYKEPTPIQAQGWPIAM 498
VT G + NP++ + E P V+ + MGYKEPTPIQ PIA+
Sbjct: 150 VTKGGGNIPNPLRSWNECKEIPGIVRDTISRMGYKEPTPIQRAAIPIAL 198
Score = 38.3 bits (85), Expect = 0.27
Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLGGLXE 644
+D++GV +TGSGKT ++++P I +I P + + +GP L+L E
Sbjct: 201 RDVIGVAETGSGKTASFLIPLISYICELPKLDERSKVNGPYGLILAPTRE 250
>UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium
falciparum|Rep: DEAD box DNA helicase - Plasmodium
falciparum
Length = 516
Score = 43.2 bits (97), Expect = 0.009
Identities = 17/25 (68%), Positives = 22/25 (88%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHI 578
KDL+GV +TGSGKTLA++LP +HI
Sbjct: 99 KDLIGVAETGSGKTLAFVLPCFMHI 123
Score = 42.7 bits (96), Expect = 0.012
Identities = 25/81 (30%), Positives = 38/81 (46%)
Frame = +1
Query: 265 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 444
Q N N + L + + E +NN + G+ +HN I F + F + + +
Sbjct: 21 QNSNDNLNNEQTNCLSKEDIQNELKKNNIYINKDGI-IHNIINKFSDVCFHESILNYLNN 79
Query: 445 MGYKEPTPIQAQGWPIAMSGK 507
+ EPT IQ WPIA+SGK
Sbjct: 80 K-FSEPTAIQKITWPIALSGK 99
>UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 865
Score = 43.2 bits (97), Expect = 0.009
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = +3
Query: 507 DLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXE 644
+LVG+ +TGSGKT AY++PAI ++ NQ R GP L++ E
Sbjct: 525 NLVGIAQTGSGKTAAYLIPAITYVINQNKKR---GPHVLIMANTRE 567
Score = 37.1 bits (82), Expect = 0.61
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +1
Query: 316 SPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIA 495
S E E+++ + + G H Q+ + P+ Q V+ + EPTPIQ PI
Sbjct: 462 SDQEFEDFKIRENIKIIGDCPHRLFQFNPQMMLPELFQN-VREQNWTEPTPIQKIAIPIV 520
Query: 496 MSG 504
MSG
Sbjct: 521 MSG 523
>UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 568
Score = 43.2 bits (97), Expect = 0.009
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +1
Query: 337 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
+R + ++ G + P++ + E+ P + ++ +GYKEP+PIQ Q PI + +
Sbjct: 249 FREDFGISARGGNIPKPLRSWRESGIPASILSTIEEVGYKEPSPIQRQAIPIGLQNR 305
Score = 40.3 bits (90), Expect = 0.066
Identities = 17/45 (37%), Positives = 31/45 (68%), Gaps = 3/45 (6%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVL 629
+DL+G+ +TGSGKT ++++P + +I+ P + + GP AL+L
Sbjct: 305 RDLIGIAETGSGKTASFLIPLLAYISKLPKLDEHTKALGPQALIL 349
>UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82;
Proteobacteria|Rep: ATP-dependent RNA helicase srmB -
Escherichia coli (strain K12)
Length = 444
Score = 43.2 bits (97), Expect = 0.009
Identities = 21/64 (32%), Positives = 38/64 (59%)
Frame = +3
Query: 438 KDNGLQRTDAHSSSRLADSYVWKDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPI 617
+D G R A ++ + + +D++G TG+GKT AY+LPA+ H+ + P R+ GP
Sbjct: 20 QDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQHLLDFP--RKKSGPP 77
Query: 618 ALVL 629
+++
Sbjct: 78 RILI 81
>UniRef50_Q84TG1 Cluster: DEAD-box ATP-dependent RNA helicase 57;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 57 - Arabidopsis thaliana (Mouse-ear cress)
Length = 541
Score = 43.2 bits (97), Expect = 0.009
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Frame = +1
Query: 340 RNNHEVTVSGVEVHNPIQYFEEANF----PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
R + + VSG + P++ F E + Y+ + + +G+KEPTPIQ Q PI +SG+
Sbjct: 120 RKQYSIHVSGNNIPPPLKSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSGR 179
>UniRef50_Q86B47 Cluster: CG8611-PB, isoform B; n=2; Drosophila
melanogaster|Rep: CG8611-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 975
Score = 42.7 bits (96), Expect = 0.012
Identities = 22/43 (51%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPP-IRRGDGPIALVL 629
KD++ +TGSGKTLAY LP + + Q P I+R DG +ALV+
Sbjct: 366 KDVLVRSQTGSGKTLAYALPLVELLQKQQPRIQRKDGVLALVI 408
>UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. RNA
SFII helicase; n=3; Cryptosporidium|Rep: Nucleolar
protein GU2. eIF4A-1-family. RNA SFII helicase -
Cryptosporidium parvum Iowa II
Length = 738
Score = 42.7 bits (96), Expect = 0.012
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +3
Query: 438 KDNGLQRTDAHSSSRLADSYVWKDLVGVPKTGSGKTLAYILPAIVHINNQ---PPIRRGD 608
+ G++R + Y KD++G KTG+GKTLA++LP I + + P + G
Sbjct: 80 RSRGIERLFPIQAQSFESIYGKKDVLGKAKTGTGKTLAFVLPVIERLLKKGKFDPNKHGR 139
Query: 609 GPIALVL 629
P+ LVL
Sbjct: 140 RPLVLVL 146
>UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_85,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 957
Score = 42.7 bits (96), Expect = 0.012
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 629
++ + + +TGSGKTLAY+LPA+VH+ I P L+L
Sbjct: 97 RNALAIAQTGSGKTLAYLLPALVHLEQHAMIMESPQPKLLIL 138
>UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Deinococcus|Rep: DEAD/DEAH box helicase-like protein -
Deinococcus geothermalis (strain DSM 11300)
Length = 591
Score = 42.3 bits (95), Expect = 0.016
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Frame = +3
Query: 426 ATRCKDNGLQRTDAHSSSRLADSYVWKDLVGVPKTGSGKTLAYILPAIVHI---NNQPPI 596
A R + G+ + L + KDL+G +TG+GKTLA+ LP I ++ + +
Sbjct: 12 AARLAERGITEASPIQAESLPHTLAGKDLIGRARTGTGKTLAFALPIIQNLTAPDGRGSR 71
Query: 597 RRGDGPIALVLGGLXES*HNKFQQVAADFGXHILCS*HVCVWWWFLKESKPGTLRRGXKI 776
RG P A+V+ E +QVA +F V V+ + LRRG +
Sbjct: 72 ERGRLPRAIVIAPTRE----LAKQVAEEFSKSGPQLSTVTVYGGAAYGPQENALRRGVDV 127
Query: 777 VI 782
V+
Sbjct: 128 VV 129
>UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5;
n=4; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 5 - Arabidopsis thaliana (Mouse-ear cress)
Length = 537
Score = 42.3 bits (95), Expect = 0.016
Identities = 16/25 (64%), Positives = 23/25 (92%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHI 578
+DL+G+ KTGSGKTLA+ +PAI+H+
Sbjct: 152 RDLIGIAKTGSGKTLAFGIPAIMHV 176
Score = 37.5 bits (83), Expect = 0.46
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 5/141 (3%)
Frame = +1
Query: 325 EVEEYRNNHEVTVSGVEV--HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAM 498
E E + VT GVE + ++ F E+N P+ V KT +++P+PIQ+ WP +
Sbjct: 92 EGESEQQKVVVTGKGVEEAKYAALKTFAESNLPENVLDCCKT--FEKPSPIQSHTWPFLL 149
Query: 499 SGKI*LAYPKRVPAKRWPTSCQPLC-T*TTNRLF--GEVMVRLLWSWAAXQRVSTTNFSK 669
G+ + K K + N+ G V + R S
Sbjct: 150 DGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQISD 209
Query: 670 LLQILGHTSYVRNTCVFGGGS 732
+L+ G +++ CV+GG S
Sbjct: 210 VLREAGEPCGLKSICVYGGSS 230
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 41.9 bits (94), Expect = 0.022
Identities = 29/117 (24%), Positives = 52/117 (44%)
Frame = +1
Query: 391 QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LAYPKRVPAKRWPTSCQPL 570
Q F+ D+V +G++ G+ P+P+Q+Q PI + GK +A + K + L
Sbjct: 45 QGFDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQGKDLIAQAQTGTGKTAAFAIPIL 104
Query: 571 CT*TTNRLFGEVMVRLLWSWAAXQRVSTTNFSKLLQILGHTSYVRNTCVFGGGS*KR 741
T N+ +++ R S+ + LG ++ C++GG S KR
Sbjct: 105 NTLNRNKDIEALII-------TPTRELAMQISEEILKLGRFGRIKTICMYGGQSIKR 154
>UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,
isoform c; n=4; Caenorhabditis|Rep: Vasa-and belle-like
helicase protein 1, isoform c - Caenorhabditis elegans
Length = 660
Score = 41.9 bits (94), Expect = 0.022
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +1
Query: 346 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
N V VSG V I++F EA F V + V GY +PTP+Q P ++ +
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANR 177
Score = 34.3 bits (75), Expect = 4.3
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHI 578
+DL+ +TGSGKT A++LP I HI
Sbjct: 177 RDLMSCAQTGSGKTAAFLLPIIQHI 201
>UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: DEAD/DEAH box
helicase-like protein - Lentisphaera araneosa HTCC2155
Length = 412
Score = 41.5 bits (93), Expect = 0.028
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA 519
FE+ NFPDY+ + V + + E T IQA+ P+ GK LA
Sbjct: 3 FEQLNFPDYLSRAVDNLNFSEATDIQAKAIPLIQEGKDLLA 43
Score = 39.5 bits (88), Expect = 0.11
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 629
KDL+ +TG+GKTLA+ P I IN PP ++ + LVL
Sbjct: 39 KDLLAESQTGTGKTLAFSFPLIERINTLPPKKKKISILGLVL 80
>UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein
precursor; n=2; Actinomycetales|Rep: DEAD/DEAH box
helicase domain protein precursor - Nocardioides sp.
(strain BAA-499 / JS614)
Length = 507
Score = 41.5 bits (93), Expect = 0.028
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = +3
Query: 441 DNGLQRTDAHSSSRLADSYVWKDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 620
D G+ + ++ L DS +D++G +TGSGKT A++LP + + + P A
Sbjct: 25 DRGIVQPTPIQAATLPDSLAGRDVLGRGRTGSGKTYAFLLPLVARLTASGRPAQARKPRA 84
Query: 621 LVLGGLXE 644
LVL E
Sbjct: 85 LVLAPTRE 92
>UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 630
Score = 41.5 bits (93), Expect = 0.028
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVL 629
+D++G+ TGSGKT+ ++LP ++ Q P R +GP L++
Sbjct: 228 RDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLII 272
Score = 38.3 bits (85), Expect = 0.27
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 292 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 468
P + ++S + E R ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 469 IQAQGWPIAMSGK 507
IQ QG P+A+SG+
Sbjct: 216 IQIQGIPVALSGR 228
>UniRef50_Q7R388 Cluster: GLP_111_80478_82724; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_111_80478_82724 - Giardia lamblia
ATCC 50803
Length = 748
Score = 41.5 bits (93), Expect = 0.028
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLGGLXE 644
+D +G+ +TGSGKT A+ +PA++H QPP PI +V E
Sbjct: 287 RDCIGIAETGSGKTHAFSIPALLHAAAQPPTSEAVPSPIVVVFAPARE 334
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 41.5 bits (93), Expect = 0.028
Identities = 21/50 (42%), Positives = 30/50 (60%)
Frame = +1
Query: 358 TVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
TV GV H F E N + + +T+GYK+PTPIQA P+A++G+
Sbjct: 158 TVDGVSFH--ADTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGR 205
>UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Candida glabrata|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 582
Score = 41.5 bits (93), Expect = 0.028
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 4/46 (8%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPP----IRRGDGPIALVL 629
+D++G+ TGSGKTLA+ +P + ++ P ++ DGP+ALVL
Sbjct: 214 RDILGIASTGSGKTLAFSIPILARLDALPARPVNLKTLDGPLALVL 259
>UniRef50_UPI0000E497AE Cluster: PREDICTED: similar to AFL221Cp,
partial; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to AFL221Cp, partial -
Strongylocentrotus purpuratus
Length = 268
Score = 41.1 bits (92), Expect = 0.038
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Frame = +3
Query: 453 QRTDAHSSSRLADSYVW------KDLVGVPKTGSGKTLAYILPAIVHI------NNQPPI 596
QR H + L ++Y W +DLVGV TLA++LP I + N PP
Sbjct: 161 QREKTHMNISLLEAYAWPAVLRGRDLVGVAPRDGANTLAFLLPVITQLLQSSTYTNLPP- 219
Query: 597 RRGDGPIALVL 629
G+GP+AL+L
Sbjct: 220 --GNGPLALIL 228
>UniRef50_Q16KK0 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 591
Score = 41.1 bits (92), Expect = 0.038
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Frame = +1
Query: 322 YEVEEYRNNHEVTVSG---VEVHNPIQYFEEA----NFPDYVQQGVKTMGYKEPTPIQAQ 480
++V RN H++ V V V +PI+ F E N + + + ++ GYK PTP+Q Q
Sbjct: 110 FKVNRLRNLHQIKVKKGRKVAVPDPIEQFRELAERFNVSNQLIKNIEDCGYKAPTPVQMQ 169
Query: 481 GWPIAMSG 504
P+ + G
Sbjct: 170 AIPVLLEG 177
>UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1238
Score = 41.1 bits (92), Expect = 0.038
Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 5/46 (10%)
Frame = +3
Query: 507 DLVGVPKTGSGKTLAYILPAIVHINNQPP-----IRRGDGPIALVL 629
D++G+ +TGSGKT+AY+LP ++ I +Q ++ +GP L+L
Sbjct: 133 DVIGIAQTGSGKTIAYLLPGLIQITSQKTEELNNTKKQNGPQMLIL 178
>UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box
family protein; n=2; Proteobacteria|Rep: ATP-dependent
RNA helicase, DEAD box family protein - Alteromonas
macleodii 'Deep ecotype'
Length = 441
Score = 40.7 bits (91), Expect = 0.050
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXE 644
KD++ KTGSGKT A+++PAI + Q + R D P AL+L E
Sbjct: 39 KDIIASSKTGSGKTFAFLVPAINRLMAQKALSRQD-PRALILAPTRE 84
>UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Janibacter sp. HTCC2649
Length = 514
Score = 40.7 bits (91), Expect = 0.050
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +3
Query: 474 SSRLADSYVWKDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXE 644
++ L DS +D++G +TGSGKT A++LP + ++ R+ P AL+L E
Sbjct: 46 AATLPDSLAGRDVLGRGRTGSGKTYAFLLPMLARLSAGGTRRQAKRPRALILAPTRE 102
>UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5;
Trypanosomatidae|Rep: DEAD box RNA helicase, putative -
Leishmania major
Length = 527
Score = 40.7 bits (91), Expect = 0.050
Identities = 22/50 (44%), Positives = 28/50 (56%)
Frame = +3
Query: 420 LCATRCKDNGLQRTDAHSSSRLADSYVWKDLVGVPKTGSGKTLAYILPAI 569
LCA C D G Q +S + +DL+GV +TGSGKT AY LP +
Sbjct: 64 LCAA-CADAGWQHPTRIQASTITVFAEGRDLIGVAQTGSGKTGAYALPLV 112
>UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7;
n=9; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 7 - Arabidopsis thaliana (Mouse-ear cress)
Length = 671
Score = 40.7 bits (91), Expect = 0.050
Identities = 39/124 (31%), Positives = 56/124 (45%), Gaps = 7/124 (5%)
Frame = +3
Query: 432 RCKDNGLQRTDAHSSSRLADSYVWKDLVGVPKTGSGKTLAYILPAIVHINNQPPIRR--- 602
+ K NG++ +S DLVG +TG GKTLA++LP + + N P +
Sbjct: 110 KLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILESLVNGPAKSKRKM 169
Query: 603 --GDGPIALVLGGLXES*HNKFQQVAADFGXH--ILCS*HVCVWWWFLKESKPGTLRRGX 770
G P LVL E +QVAADF + L C++ + G L+RG
Sbjct: 170 GYGRSPSVLVLLPTRE----LAKQVAADFDAYGGSLGLSSCCLYGGDSYPVQEGKLKRGV 225
Query: 771 KIVI 782
IV+
Sbjct: 226 DIVV 229
>UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp3 - Schizosaccharomyces pombe (Fission
yeast)
Length = 578
Score = 40.7 bits (91), Expect = 0.050
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = +1
Query: 385 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
PI F+E + +++G+K YKEPTPIQA WP ++G+
Sbjct: 165 PILQFDELDVSAKLREGLKN--YKEPTPIQAATWPYLLAGR 203
Score = 36.3 bits (80), Expect = 1.1
Identities = 13/26 (50%), Positives = 23/26 (88%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHIN 581
+D+VG+ +TGSGKT+A+ +PA+ ++N
Sbjct: 203 RDVVGIAETGSGKTVAFGIPALQYLN 228
>UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 585
Score = 40.3 bits (90), Expect = 0.066
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLGGLXE---S*HNKFQ 665
+DL+ + +TG+GKT AY++P I + P + GP ALVL E +
Sbjct: 214 RDLIALAETGTGKTFAYLIPLIQFVLKLPKLTEETSASGPYALVLAPTRELALQIQKETL 273
Query: 666 QVAADFGXHILC 701
++A FG + C
Sbjct: 274 KLATPFGLRVCC 285
Score = 33.9 bits (74), Expect = 5.7
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +1
Query: 340 RNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAM 498
R N + V+ EV P++ +++ N D + +K + Y+ PTPIQ PIA+
Sbjct: 160 RENLNIFVNNNEVIKPLRKWDDMNVCDDLLLLIKNI-YENPTPIQCASIPIAL 211
>UniRef50_A7SJ72 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 585
Score = 40.3 bits (90), Expect = 0.066
Identities = 19/36 (52%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +3
Query: 525 KTGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVL 629
KTGSGKTL Y +P + + + P I R DGP A+VL
Sbjct: 153 KTGSGKTLCYAIPVVQTLQDIVPKIERADGPYAVVL 188
>UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform a
variant; n=3; Tetrapoda|Rep: ATP-dependent RNA helicase
ROK1 isoform a variant - Homo sapiens (Human)
Length = 512
Score = 40.3 bits (90), Expect = 0.066
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +1
Query: 340 RNNHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
RN H++ V G ++ +PI F +E + Q + G++ PTPIQ Q P+ + G+
Sbjct: 143 RNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGR 202
Query: 508 I*LA 519
LA
Sbjct: 203 ELLA 206
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 40.3 bits (90), Expect = 0.066
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 388 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 504
+Q F+E D Q +++MG+KEPTPIQ P A+ G
Sbjct: 1 MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQG 39
>UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX52;
n=37; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX52 - Homo sapiens (Human)
Length = 599
Score = 40.3 bits (90), Expect = 0.066
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +1
Query: 340 RNNHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
RN H++ V G ++ +PI F +E + Q + G++ PTPIQ Q P+ + G+
Sbjct: 144 RNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGR 203
Query: 508 I*LA 519
LA
Sbjct: 204 ELLA 207
>UniRef50_Q5KMS9 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP10 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 802
Score = 40.3 bits (90), Expect = 0.066
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 629
+D++G+ +TGSGKTLAY++P + + G GP AL+L
Sbjct: 67 RDILGMARTGSGKTLAYLIPLLQRTGS---THHGQGPRALIL 105
>UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 432
Score = 39.9 bits (89), Expect = 0.087
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRG 605
KD++G+ +TGSGKT +++LP + H+ N RG
Sbjct: 47 KDIIGIAQTGSGKTASFLLPMVQHLLNVKEKNRG 80
>UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2;
Theileria|Rep: RNA helicase, putative - Theileria
annulata
Length = 620
Score = 39.9 bits (89), Expect = 0.087
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIV---HINNQPPIRRGDGPIALVL 629
+D++GV TG+GKTL +++P I+ I + PI +GP LV+
Sbjct: 227 RDVIGVSSTGTGKTLVFVIPMIMQSWEIELRLPIESREGPFGLVI 271
Score = 35.9 bits (79), Expect = 1.4
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +1
Query: 328 VEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
V+ RN + VSG +V PI FE+ P + + + EPT IQ Q P + G+
Sbjct: 168 VDSIRNALLIDVSGDQVPPPILNFEDMKLPKPILKALNHKKIFEPTKIQMQALPSVLLGR 227
>UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=3; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
helicase, putative - Trypanosoma brucei
Length = 660
Score = 39.9 bits (89), Expect = 0.087
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 6/53 (11%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAI----VHINNQPPIRRG--DGPIALVLGGLXE 644
+DL+ +TGSGKT +Y++PAI ++I+N+PP G P AL+L E
Sbjct: 195 RDLMACAQTGSGKTASYLIPAINEILLNISNRPPYSPGSHSSPQALILAPTRE 247
Score = 36.7 bits (81), Expect = 0.81
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 385 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMS 501
P+ F E N + + VK GY +PTP+Q+ G P A++
Sbjct: 155 PVLSFSEMNMVPVLLENVKRCGYTKPTPVQSLGIPTALN 193
>UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11;
Plasmodium|Rep: DEAD-box helicase 11 - Plasmodium
falciparum
Length = 941
Score = 39.9 bits (89), Expect = 0.087
Identities = 18/30 (60%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +3
Query: 507 DLVGVPKTGSGKTLAYILPAIVH-INNQPP 593
DL+GV +TGSGKT Y+LP I H + N PP
Sbjct: 401 DLIGVAQTGSGKTAGYLLPIINHMLINDPP 430
>UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 26 - Arabidopsis thaliana (Mouse-ear cress)
Length = 850
Score = 39.9 bits (89), Expect = 0.087
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +3
Query: 438 KDNGLQRTDAHSSSRLADSYVWKDLVGVPKTGSGKTLAYILPAIVHINNQPPIRR 602
KD G + + L KD++ KTG+GKT+A++LPAI + PP R
Sbjct: 398 KDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEAVIKSPPASR 452
>UniRef50_Q9H8H2 Cluster: Probable ATP-dependent RNA helicase DDX31;
n=30; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX31 - Homo sapiens (Human)
Length = 851
Score = 39.9 bits (89), Expect = 0.087
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHIN-NQPPIRRGDGPIALVL 629
+D + +TGSGKTLAY +P + + + I+R DGP ALVL
Sbjct: 269 RDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVL 311
>UniRef50_UPI0000E49D13 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 59; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 -
Strongylocentrotus purpuratus
Length = 620
Score = 39.5 bits (88), Expect = 0.11
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +1
Query: 286 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 444
Y HP + + +P +V++ RN ++ V G+ + PI FE+ P +KT
Sbjct: 276 YREHPDISQLAPEQVQDIRNEVQIFVEGINIQRPILEFEQLRLPAKRMLSMKT 328
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 39.5 bits (88), Expect = 0.11
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADF 683
KDL G+ +TG+GKT A+ LP+I ++ P R G L+L E ++ + D+
Sbjct: 44 KDLCGIAQTGTGKTAAFALPSIHYLATNPQARPQRGCRMLILSPTREL-ASQIARACNDY 102
Query: 684 GXHILCS 704
H+ S
Sbjct: 103 TRHLRMS 109
>UniRef50_Q5ENJ0 Cluster: Chloroplast RNA helicase; n=1; Heterocapsa
triquetra|Rep: Chloroplast RNA helicase - Heterocapsa
triquetra (Dinoflagellate)
Length = 324
Score = 39.5 bits (88), Expect = 0.11
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Frame = +3
Query: 450 LQRTDAHSSSRLADSYVW------KDLVGVPKTGSGKTLAYILPAIVHINNQ 587
LQR + S++ Y W +D +GV TGSGKTLA++LP + H+ Q
Sbjct: 121 LQRAGFPAPSQI-QQYTWPLAAQMRDTIGVAATGSGKTLAFLLPGMAHVAAQ 171
>UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa
homolog - Ciona savignyi (Pacific transparent sea
squirt)
Length = 770
Score = 39.5 bits (88), Expect = 0.11
Identities = 20/46 (43%), Positives = 23/46 (50%)
Frame = +1
Query: 355 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 492
V VSGV I FE A P+ V VK Y+ PTP+Q PI
Sbjct: 301 VEVSGVNAPKSIPTFEVAGLPETVLANVKRANYERPTPVQKYSIPI 346
>UniRef50_A0DK92 Cluster: Chromosome undetermined scaffold_54, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_54,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 696
Score = 39.5 bits (88), Expect = 0.11
Identities = 20/44 (45%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAI--VHINNQPPIRRGDGPIALVL 629
+D++G KTGSGKTL+Y+LP I +++N P+ DG AL++
Sbjct: 94 RDILGASKTGSGKTLSYLLPLIENLYVNKWTPL---DGLGALII 134
>UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20;
Ascomycota|Rep: ATP-dependent RNA helicase DBP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 523
Score = 39.5 bits (88), Expect = 0.11
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINN 584
KD+VGV +TGSGKT A+ +PAI H+ N
Sbjct: 150 KDVVGVAETGSGKTFAFGVPAISHLMN 176
Score = 35.5 bits (78), Expect = 1.9
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +1
Query: 283 FYDPHPTVLKRSPYEVEEYRNNHEVTVS-GVEVH-NPIQYFEEANFPDYVQQGVKTMGYK 456
FY + +++EY +E+ V +++ P+ F+ + +Q + +
Sbjct: 76 FYVQSEALTSLPQSDIDEYFKENEIAVEDSLDLALRPLLSFDYLSLDSSIQAEISK--FP 133
Query: 457 EPTPIQAQGWPIAMSGK 507
+PTPIQA WP +SGK
Sbjct: 134 KPTPIQAVAWPYLLSGK 150
>UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP3 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 605
Score = 39.5 bits (88), Expect = 0.11
Identities = 18/41 (43%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPI---RRGDGPI 617
KD+VG+ +TGSGKTLA+ +P I ++ PP+ ++G G +
Sbjct: 211 KDVVGIAETGSGKTLAFGVPGINLLSQLPPVTGSKKGRGQV 251
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 39.1 bits (87), Expect = 0.15
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = +1
Query: 376 VHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA 519
V + FEE + + + V+ +G+ +PTPIQA+ P+A++GK LA
Sbjct: 185 VEEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILA 232
>UniRef50_Q16YP8 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Culicidae|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 792
Score = 39.1 bits (87), Expect = 0.15
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQP-PIRRGDGPIALVL 629
KD++ +TGSGKTLAY LP + +++Q + R DG +A+V+
Sbjct: 193 KDVLIRAQTGSGKTLAYALPLVERLHSQEVKVSRSDGILAVVI 235
>UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3;
Eutheria|Rep: Nucleolar protein GU2 variant - Homo
sapiens (Human)
Length = 363
Score = 39.1 bits (87), Expect = 0.15
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +3
Query: 495 YVWKDLVGVPKTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIALVLGGLXES*HNKFQQV 671
Y KDL+ +TG+GKT ++ +P I + NQ I++ P LVL E QV
Sbjct: 172 YEGKDLIAQARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPTGE----LANQV 227
Query: 672 AADF 683
A DF
Sbjct: 228 AKDF 231
>UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Yarrowia lipolytica (Candida lipolytica)
Length = 974
Score = 39.1 bits (87), Expect = 0.15
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQ 587
+D++ V KTGSGKTLA++LP + HI ++
Sbjct: 416 RDVISVAKTGSGKTLAFLLPMLRHIKHR 443
Score = 37.1 bits (82), Expect = 0.61
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +1
Query: 265 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 441
+ F + FY + + E E R + + + + G + PI + + P +
Sbjct: 335 EDFRRQFYVESSELADMTEAETNELRLSLDGIKIRGKDCPKPISKWTQLGLPGPTMGVLN 394
Query: 442 TMGYKEPTPIQAQGWPIAMSGK 507
+ Y +PT IQAQ P MSG+
Sbjct: 395 DLRYDKPTSIQAQAIPAVMSGR 416
>UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP10 -
Ustilago maydis (Smut fungus)
Length = 1154
Score = 39.1 bits (87), Expect = 0.15
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQ 587
+D+VG+ +TGSGKTLAY++P I +N +
Sbjct: 184 RDVVGMARTGSGKTLAYLIPLINRLNGR 211
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 38.7 bits (86), Expect = 0.20
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 629
KDL+G +TG+GKTLA+ LP + P RG P ALVL
Sbjct: 39 KDLIGQARTGTGKTLAFALPIAERL--APSQERGRKPRALVL 78
>UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Kineococcus radiotolerans SRS30216|Rep: DEAD/DEAH
box helicase domain protein - Kineococcus radiotolerans
SRS30216
Length = 590
Score = 38.7 bits (86), Expect = 0.20
Identities = 22/61 (36%), Positives = 30/61 (49%)
Frame = +3
Query: 447 GLQRTDAHSSSRLADSYVWKDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 626
G+ A S L D +D++G +TGSGKTL + LP + + Q R P LV
Sbjct: 165 GMTAPFAIQSRTLPDGIAGRDILGRARTGSGKTLGFGLPMLARLAQQKRPRITGAPRGLV 224
Query: 627 L 629
L
Sbjct: 225 L 225
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 38.7 bits (86), Expect = 0.20
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +3
Query: 429 TRCKDN-GLQRTDAHSSSRLADSYVWKDLVGVPKTGSGKTLAYILPAIVHI 578
T+ D+ G+ + + L D+ KD++G +TGSGKTL +++PA+ I
Sbjct: 16 TKALDSQGIHQLSPIQAQSLPDALQGKDVIGQAQTGSGKTLCFVIPALEKI 66
>UniRef50_Q013Q9 Cluster: DEAD/DEAH box helicase, putative; n=7;
cellular organisms|Rep: DEAD/DEAH box helicase, putative
- Ostreococcus tauri
Length = 1423
Score = 38.7 bits (86), Expect = 0.20
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAI 569
+D++G PKTGSGKTLAY++P +
Sbjct: 740 RDVLGPPKTGSGKTLAYVIPLV 761
>UniRef50_Q5CWD0 Cluster: Prp5p C terminal KH. eIF4A-1-family RNA
SFII helicase; n=2; Cryptosporidium|Rep: Prp5p C
terminal KH. eIF4A-1-family RNA SFII helicase -
Cryptosporidium parvum Iowa II
Length = 934
Score = 38.7 bits (86), Expect = 0.20
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +3
Query: 507 DLVGVPKTGSGKTLAYILPAIVHI 578
D++G +TGSGKTLAYILP I H+
Sbjct: 261 DMIGNAETGSGKTLAYILPLIRHV 284
>UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:
VASA RNA helicase - Moina macrocopa
Length = 843
Score = 38.7 bits (86), Expect = 0.20
Identities = 19/43 (44%), Positives = 24/43 (55%)
Frame = +1
Query: 346 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 474
N + V+G V N I FE A D V Q +K GY +PTP+Q
Sbjct: 394 NAILQVTGNNVPNYITSFETAGLRDLVLQNIKASGYTKPTPVQ 436
>UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa
homlogue - Platynereis dumerilii (Dumeril's clam worm)
Length = 712
Score = 38.7 bits (86), Expect = 0.20
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 355 VTVSGVEV-HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
V VSG N I F++A+ + V+ V+ Y PTPIQ PI +SGK
Sbjct: 257 VEVSGTNAPKNGILNFDQADLSETVRSNVRKAKYDRPTPIQKWAIPIVLSGK 308
Score = 38.3 bits (85), Expect = 0.27
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 6/113 (5%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDG------PIALVLGGLXES*HNKFQ 665
KDL+G +TGSGKT A++LP + I I G G P A+++G E N+
Sbjct: 308 KDLMGCAQTGSGKTAAFLLPVLTGIIKNDLIEGGSGFGGPQYPAAIIVGPTREL-VNQIY 366
Query: 666 QVAADFGXHILCS*HVCVWWWFLKESKPGTLRRGXKIVICYXQVD*LDFFGKG 824
A F C V V+ + L +G +V+ LDF GKG
Sbjct: 367 LEARKFASS-TCVRPVVVYGGTSVGYQARELEKGAHVVV-GTPGRLLDFIGKG 417
>UniRef50_A7T4Z6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 329
Score = 38.7 bits (86), Expect = 0.20
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVL 629
+D++G+ TGSGKTL + LP I+ Q P +R +GP +++
Sbjct: 282 RDMIGIAFTGSGKTLVFTLPIIMFSLEQEKAMPFQRNEGPYGMIV 326
Score = 35.9 bits (79), Expect = 1.4
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 400 EEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
EE FP + +K G PTPIQ QG P ++G+
Sbjct: 247 EEMKFPRPILAALKKKGITHPTPIQVQGLPAVLTGR 282
>UniRef50_A2DGJ7 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 156
Score = 38.7 bits (86), Expect = 0.20
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +3
Query: 507 DLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 629
D+VG KTGSGKTLA+++PAI ++ I + +G L+L
Sbjct: 55 DVVGAAKTGSGKTLAFVIPAI-NLLISKNISKSEGIAVLIL 94
>UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_36,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1127
Score = 38.7 bits (86), Expect = 0.20
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Frame = +3
Query: 507 DLVGVPKTGSGKTLAYILPAIVHI---NNQPPIR-RGDGPIALVLGGLXES*HNKFQQVA 674
DL+GV +TGSGKT Y+LP ++ I N R R +GP L+L E QQV+
Sbjct: 139 DLIGVAETGSGKTFGYLLPGLIQIKCQNYGSNFRNRINGPEILILAPTRELVMQIAQQVS 198
Score = 37.5 bits (83), Expect = 0.46
Identities = 16/77 (20%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +1
Query: 283 FYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHN---PIQYFEEANFPDYVQQGVKTMGY 453
++ P + P +V+++ +E+ + ++ P + FP +Q + + +
Sbjct: 61 YFQPQQLASQPMPEKVKDFLKANEIAIKAIDGQPCPYPFLTWGGTQFPPQIQNVIDGLNF 120
Query: 454 KEPTPIQAQGWPIAMSG 504
+ PTPIQ+ +P+ +SG
Sbjct: 121 RAPTPIQSVVFPLILSG 137
>UniRef50_Q0CX32 Cluster: DEAD-box protein 3; n=11;
Pezizomycotina|Rep: DEAD-box protein 3 - Aspergillus
terreus (strain NIH 2624)
Length = 590
Score = 38.7 bits (86), Expect = 0.20
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +1
Query: 346 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 504
N EV E NP++ F++A +++ ++ Y PTPIQA P ++G
Sbjct: 118 NIEVVAESRERPNPVKNFDDAGLHPIMRENIRLCRYNVPTPIQAYAIPAILTG 170
>UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 617
Score = 38.7 bits (86), Expect = 0.20
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = +3
Query: 459 TDAHSSSRLADSYVWKDLVGVPKTGSGKTLAYILPAIVHINNQPP 593
TD S + LA + KDLV KTG+GKTLA+++P I I + P
Sbjct: 2 TDVQSMT-LAPALKGKDLVAQAKTGTGKTLAFLIPVIQKILDADP 45
>UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;
n=6; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 41 - Arabidopsis thaliana (Mouse-ear cress)
Length = 505
Score = 38.7 bits (86), Expect = 0.20
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +1
Query: 316 SPYEVEEYRNNHEVTVSGV--EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWP 489
S ++ + R ++ V G V P+ F P + ++T GY PTPIQ Q P
Sbjct: 83 SSHDAQLLRRKLDIHVQGQGSAVPPPVLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIP 142
Query: 490 IAMSGKI*LA 519
A++GK LA
Sbjct: 143 AALTGKSLLA 152
>UniRef50_UPI0000E49031 Cluster: PREDICTED: similar to DEAD/DEXH
helicase DDX31; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to DEAD/DEXH helicase DDX31 -
Strongylocentrotus purpuratus
Length = 690
Score = 38.3 bits (85), Expect = 0.27
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +3
Query: 525 KTGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVL 629
+TG+GKTLAY +P + + QP ++R GP AL+L
Sbjct: 179 QTGTGKTLAYAVPVVQQLQGLQPKVQRLHGPYALIL 214
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 38.3 bits (85), Expect = 0.27
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
F + P + +GV+ MGY +PTP+Q + P+ ++G+
Sbjct: 3 FSKLGLPSSLVRGVQAMGYVDPTPVQLRAIPVVLAGR 39
>UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 732
Score = 38.3 bits (85), Expect = 0.27
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +3
Query: 438 KDNGLQRTDAHSSSRLADSYVWKDLVGVPKTGSGKTLAYILPAI 569
KDN + +A S D+VG KTGSGKTLA ++P +
Sbjct: 92 KDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVL 135
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 38.3 bits (85), Expect = 0.27
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
F E N + + V MG++E TPIQ Q P+AM GK
Sbjct: 4 FTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGK 40
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 38.3 bits (85), Expect = 0.27
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
F E D + Q V++MG++E TPIQA+ P A+ GK
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGK 40
>UniRef50_Q6MN90 Cluster: RNA helicase; n=1; Bdellovibrio
bacteriovorus|Rep: RNA helicase - Bdellovibrio
bacteriovorus
Length = 460
Score = 37.9 bits (84), Expect = 0.35
Identities = 18/44 (40%), Positives = 30/44 (68%), Gaps = 4/44 (9%)
Frame = +3
Query: 510 LVGVPKTGSGKTLAYILPAIVHI----NNQPPIRRGDGPIALVL 629
+VGV +TGSGKTLAY+LP + ++ + P++ + P A+V+
Sbjct: 94 VVGVSETGSGKTLAYVLPILNYLKSLEESGDPVKEENAPRAVVM 137
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 37.9 bits (84), Expect = 0.35
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXE 644
KDLVG+ +TG+GKT A+ LP I + P +G A++L E
Sbjct: 141 KDLVGLAQTGTGKTAAFALPLIQQLLMNPIAIKGRSARAIILSPTRE 187
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 37.9 bits (84), Expect = 0.35
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
F + + VQ+ + MGY PTPIQAQ P+ + G+
Sbjct: 225 FADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGR 261
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 37.9 bits (84), Expect = 0.35
Identities = 23/64 (35%), Positives = 37/64 (57%)
Frame = +3
Query: 438 KDNGLQRTDAHSSSRLADSYVWKDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPI 617
K+N + T S + + + KD+V +TG+GKTLA++LP I ++ +P R G
Sbjct: 19 KNNFTEPTPIQSLA-IEPALAGKDIVATAQTGTGKTLAFLLPTIQLLSTEP---RQPGVR 74
Query: 618 ALVL 629
AL+L
Sbjct: 75 ALIL 78
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 37.9 bits (84), Expect = 0.35
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +1
Query: 361 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
V+ VE+ F + D + V MGY EPTPIQAQ P ++G+
Sbjct: 123 VTPVEIPPQDTAFSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGR 171
>UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Flavobacteria|Rep: DEAD/DEAH box helicase domain
protein - Flavobacterium johnsoniae UW101
Length = 450
Score = 37.9 bits (84), Expect = 0.35
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
FE+ N P +Q+ V +G+ PTPIQ + + + MSG+
Sbjct: 4 FEKFNLPKSLQKAVDELGFVTPTPIQEKSFSVIMSGR 40
Score = 33.5 bits (73), Expect = 7.5
Identities = 11/22 (50%), Positives = 19/22 (86%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAI 569
+D++G+ +TG+GKT AY+LP +
Sbjct: 40 RDMMGIAQTGTGKTFAYLLPLL 61
>UniRef50_A5B2H1 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 37.9 bits (84), Expect = 0.35
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 629
KD+V KTGSGKT AY+LP + + ++ R P A VL
Sbjct: 62 KDVVARAKTGSGKTFAYLLPLLQKLFSESESRNKLAPSAFVL 103
>UniRef50_Q5C221 Cluster: SJCHGC04124 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04124 protein - Schistosoma
japonicum (Blood fluke)
Length = 157
Score = 37.9 bits (84), Expect = 0.35
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVH 575
KD+VG+ +TGSGKT A++LP I H
Sbjct: 39 KDVVGIAETGSGKTAAFLLPIIQH 62
>UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5;
Trypanosomatidae|Rep: DEAD box RNA helicase, putative -
Leishmania major
Length = 657
Score = 37.9 bits (84), Expect = 0.35
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXE 644
+DL+ KTG+GKTLA+++P IV I + R +G A+++G E
Sbjct: 201 RDLLAEAKTGAGKTLAFLIP-IVEIVCRSGFRPSNGTAAIIIGPTRE 246
>UniRef50_Q4DJM0 Cluster: ATP-dependent RNA helicase, putative; n=2;
Trypanosoma cruzi|Rep: ATP-dependent RNA helicase,
putative - Trypanosoma cruzi
Length = 886
Score = 37.9 bits (84), Expect = 0.35
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
Frame = +3
Query: 507 DLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGD------GPIALVL 629
D++GV +TGSGKT AY++P I + P G+ GP+ALV+
Sbjct: 257 DVLGVAETGSGKTAAYLIPLFADILRRTPRLLGNEALISHGPLALVM 303
>UniRef50_Q5KC99 Cluster: ATP-dependent RNA helicase MAK5; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase MAK5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 772
Score = 37.9 bits (84), Expect = 0.35
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRG 605
+D+VGV +TGSGKTLAY LP + ++ Q + G
Sbjct: 210 RDVVGVAETGSGKTLAYSLPILHYLLGQRKSKAG 243
>UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP3 -
Ustilago maydis (Smut fungus)
Length = 585
Score = 37.9 bits (84), Expect = 0.35
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHI 578
KD+VG+ +TGSGKT A+ LPA+ H+
Sbjct: 197 KDVVGIAETGSGKTFAFGLPALQHL 221
Score = 33.1 bits (72), Expect = 10.0
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Frame = +1
Query: 316 SPYEVEEYRNNHEVTVSGVEVHN-----PIQYFEEAN--FPDYVQQGVKTMGYKEPTPIQ 474
+P + +H +T+ E N P+ F E + V++ + + G+ PTPIQ
Sbjct: 127 NPAAARAFVESHNITIEAPEESNERPPLPMVDFRELDGKVDAAVKKTLDSQGFSTPTPIQ 186
Query: 475 AQGWPIAMSGK 507
A WP+ + K
Sbjct: 187 ACCWPVLLQNK 197
>UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
RE48840p - Nasonia vitripennis
Length = 1378
Score = 37.5 bits (83), Expect = 0.46
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAI 569
+DLVG KTGSGKTL++++PA+
Sbjct: 245 RDLVGAAKTGSGKTLSFLIPAV 266
>UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
RE48840p - Nasonia vitripennis
Length = 1134
Score = 37.5 bits (83), Expect = 0.46
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAI 569
+DLVG KTGSGKTL++++PA+
Sbjct: 670 RDLVGAAKTGSGKTLSFLIPAV 691
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 37.5 bits (83), Expect = 0.46
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 441 DNGLQRTDAHSSSRLADSYVWKDLVGVPKTGSGKTLAYILPAIVHINNQP 590
D G + A S + + +D+VG +TGSGKT A+ LP + + N P
Sbjct: 22 DKGYRAPTAIQSQAIPAILLGRDVVGSAQTGSGKTAAFALPMLQQLANAP 71
>UniRef50_Q3LWF0 Cluster: ATP-dependent RNA helicase; n=1;
Bigelowiella natans|Rep: ATP-dependent RNA helicase -
Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 507
Score = 37.5 bits (83), Expect = 0.46
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIR 599
KD+ + KTGSGKTL Y++P IV +N +R
Sbjct: 172 KDIFCLAKTGSGKTLCYLIPLIVGLNRLKNVR 203
>UniRef50_A7PDS5 Cluster: Chromosome chr11 scaffold_13, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr11 scaffold_13, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 563
Score = 37.5 bits (83), Expect = 0.46
Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +3
Query: 528 TGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVL 629
TG+GKT+AY+ P I H++ P I R G ALVL
Sbjct: 77 TGTGKTIAYLAPVINHLHKYDPRIERSAGTFALVL 111
>UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 755
Score = 37.5 bits (83), Expect = 0.46
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
F+E + + + + +GYK+PTPIQA PIAM+G+
Sbjct: 150 FDELHLSRPLTRACEALGYKKPTPIQAAVIPIAMTGR 186
>UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 552
Score = 37.5 bits (83), Expect = 0.46
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHIN---NQPPIRRGDGPIALVLGGLXES*HNKFQQVA 674
+D +G+ TGSGKT+A+ +PA++H+ + ++G P LVL E + V
Sbjct: 130 RDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKG-VPRVLVLSPTREL-AQQIADVL 187
Query: 675 ADFGXHILCS*HVCVWWWFLKESKPGTLRRGXKIVI 782
+ G S VC++ K + L+ G IVI
Sbjct: 188 CEAGAPCGIS-SVCLYGGTSKGPQISALKSGVDIVI 222
>UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=3;
Paramecium tetraurelia|Rep: Nucleolar RNA helicase II,
putative - Paramecium tetraurelia
Length = 664
Score = 37.5 bits (83), Expect = 0.46
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +3
Query: 495 YVWKDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 629
Y D++G +TGSGKTLAY LP + I +++ P LVL
Sbjct: 60 YNGDDIIGQDRTGSGKTLAYCLPILERIRGL-GLKQNKNPYVLVL 103
>UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep:
Vasa-like protein - Anopheles gambiae (African malaria
mosquito)
Length = 596
Score = 37.5 bits (83), Expect = 0.46
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +1
Query: 352 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
+V VSG + ++ FE + + V V+ Y +PTPIQ PI ++G+
Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGR 212
>UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 605
Score = 37.5 bits (83), Expect = 0.46
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINN---QP-PIRRGDGPIALVLGGLXE 644
+DL+G+ TGSGKTLA+++P ++ + +P ++ +GP AL+L E
Sbjct: 227 RDLMGIASTGSGKTLAFVIPILIKLLGTAIRPLSLKVIEGPKALILAPTRE 277
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 37.5 bits (83), Expect = 0.46
Identities = 28/112 (25%), Positives = 48/112 (42%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LAYPKRVPAKRWPTSCQPLCT 576
FEE N + + + ++ GY EPT +Q+ PIA++G L + + + P+
Sbjct: 4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSD-LVVRSKTGSGKTAAYLIPIIN 62
Query: 577 *TTNRLFGEVMVRLLWSWAAXQRVSTTNFSKLLQILGHTSYVRNTCVFGGGS 732
T ++ L R +K+ + LG S +R V+GG S
Sbjct: 63 NTAKEKGIRALILL------PTRELAVQVAKVSEALGKRSGIRTVVVYGGVS 108
>UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog;
n=39; Gammaproteobacteria|Rep: ATP-dependent RNA
helicase srmB homolog - Haemophilus influenzae
Length = 439
Score = 37.5 bits (83), Expect = 0.46
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +3
Query: 447 GLQRTDAHSSSRLADSYVWKDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGP 614
G R A + + D++G TG+GKT A++LPA+ H+ + P RR GP
Sbjct: 23 GYSRPTAIQMEAIPAAMEESDVLGSAPTGTGKTAAFLLPALQHLLDYP--RRKPGP 76
>UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent rRNA
helicase RRP3 - Encephalitozoon cuniculi
Length = 400
Score = 37.5 bits (83), Expect = 0.46
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 435 CKDNGLQRTDAHSSSRLADSYVWKDLVGVPKTGSGKTLAYILPAIVHI 578
C++ G+ R + D++ V +TGSGKTLA++LP + H+
Sbjct: 16 CQEKGITRPTEVQRQVIPAVLGGGDVIAVSQTGSGKTLAFVLPIVSHL 63
>UniRef50_Q7XJN0 Cluster: DEAD-box ATP-dependent RNA helicase 17;
n=6; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 17 - Arabidopsis thaliana (Mouse-ear cress)
Length = 609
Score = 37.5 bits (83), Expect = 0.46
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 510 LVGVPKTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIALVL 629
LV P TG+GKT+AY+ P I H+ + P + R G ALV+
Sbjct: 71 LVNAP-TGTGKTIAYLAPLIHHLQGHSPKVDRSHGTFALVI 110
>UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70;
Eukaryota|Rep: ATP-dependent RNA helicase HAS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 505
Score = 37.5 bits (83), Expect = 0.46
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAI--VHINNQPPIRRGDGPIAL 623
+D++G KTGSGKTLA+++PAI +H P R G G I +
Sbjct: 80 RDVLGAAKTGSGKTLAFLIPAIELLHSLKFKP-RNGTGIIVI 120
>UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to
R27090_2 - Ornithorhynchus anatinus
Length = 332
Score = 37.1 bits (82), Expect = 0.61
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +3
Query: 432 RCKDNGLQRTDAHSSSRLADSYVWKDLVGVPKTGSGKTLAYILPAIVHINNQP 590
+C+ GL++ S + +D +G KTGSGKT A++LP + ++ P
Sbjct: 16 QCQQLGLRQPTPVQQSCVPAILEGRDCMGCAKTGSGKTAAFVLPILQKLSEDP 68
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 37.1 bits (82), Expect = 0.61
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 438 KDNGLQRTDAHSSSRLADSYVWKDLVGVPKTGSGKTLAYILPAIVHIN 581
++NG+ + KD++G KTG+GKTLA++LP + I+
Sbjct: 21 RENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILEKID 68
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 37.1 bits (82), Expect = 0.61
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPI 596
KD++G KTGSGKT A+ LP + IN P+
Sbjct: 85 KDIIGQAKTGSGKTAAFSLPILNKINLDQPL 115
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 37.1 bits (82), Expect = 0.61
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
F PD++Q+ ++++GY+ TPIQA P+ + G+
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGR 47
>UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14;
Eumetazoa|Rep: Vasa-related protein CnVAS2 - Hydra
magnipapillata (Hydra)
Length = 890
Score = 37.1 bits (82), Expect = 0.61
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +1
Query: 331 EEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMS 501
E+Y++ + +SG PIQ F EAN + + YKEPTPIQ P ++
Sbjct: 431 EKYKHI-PIELSGTNRPKPIQSFSEANLHPVCLKNLDLAKYKEPTPIQKYAIPAILA 486
>UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA
helicase-like protein; n=1; Oikopleura dioica|Rep:
ATP-dependent 61 kDa nucleolar RNA helicase-like protein
- Oikopleura dioica (Tunicate)
Length = 548
Score = 37.1 bits (82), Expect = 0.61
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +1
Query: 361 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA 519
+S VE + + + G+ +G+KEPT IQ G PIA+ GK LA
Sbjct: 1 MSDVEEEVKVVQWNSFGLDPRILSGIAALGWKEPTEIQEAGLPIALKGKDILA 53
>UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4).
EIF4A-1-family RNA SFII helicase; n=3;
Cryptosporidium|Rep: Hca4p helicase DBP4 (Helicase CA4).
EIF4A-1-family RNA SFII helicase - Cryptosporidium
parvum Iowa II
Length = 770
Score = 37.1 bits (82), Expect = 0.61
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = +3
Query: 483 LADSYVWKDLVGVPKTGSGKTLAYILPAIVHI--NNQPPIRRGDGPIALVL 629
L S +D++G +TGSGKTLAY++P + +I +N I DG ++L+L
Sbjct: 102 LPHSLQGRDIIGQARTGSGKTLAYVIPILENIYRDNYCSI---DGLLSLIL 149
>UniRef50_Q5CL10 Cluster: DEAD/H (Asp-Glu-Ala-Asp/His) box
polypeptide 24; n=2; Cryptosporidium|Rep: DEAD/H
(Asp-Glu-Ala-Asp/His) box polypeptide 24 -
Cryptosporidium hominis
Length = 837
Score = 37.1 bits (82), Expect = 0.61
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHI 578
KD+VG +TGSGKTLAY +P I +I
Sbjct: 213 KDIVGAAETGSGKTLAYGIPIIANI 237
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 37.1 bits (82), Expect = 0.61
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +3
Query: 420 LCATRCKDNGLQRTDAHSSSRLADSYVWKDLVGVPKTGSGKTLAYILPAIVHINNQP 590
LC CK+ G +R + + KD++G+ +TGSGKT A+ +P + + +P
Sbjct: 52 LCRA-CKELGWKRPTKIQIEAIPIALSGKDIIGLAETGSGKTAAFTIPILQKLLEKP 107
>UniRef50_A7AU12 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 628
Score = 37.1 bits (82), Expect = 0.61
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 325 EVEEYRNNHEVTVSGVEVHNPIQYFE--EANFPDYVQQGVKTMGYKEPTPIQAQGWPIAM 498
+V + + + GV V P F+ E P + + + +GY EPTP+Q Q P+ +
Sbjct: 94 DVVKLKKRLGIETMGVRVPKPTVSFQSLERTIPATLTKRLSKLGYLEPTPMQCQALPVLL 153
Query: 499 SGK 507
G+
Sbjct: 154 QGR 156
>UniRef50_P45818 Cluster: ATP-dependent RNA helicase ROK1; n=11;
Saccharomycetales|Rep: ATP-dependent RNA helicase ROK1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 564
Score = 37.1 bits (82), Expect = 0.61
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Frame = +1
Query: 325 EVEEYRNNHEVTVSGVEVHNPIQYFEEA----NFPDYVQQGVKTMGYKEPTPIQAQGWPI 492
E R +++ VSG+++ PI FE+ +F + + G+ EPTPIQ + P+
Sbjct: 96 EASALRKSYKGNVSGIDIPLPIGSFEDLISRFSFDKRLLNNLIENGFTEPTPIQCECIPV 155
Query: 493 AMSGKI*LA 519
A++ + LA
Sbjct: 156 ALNNRDVLA 164
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 37.1 bits (82), Expect = 0.61
Identities = 13/27 (48%), Positives = 22/27 (81%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINN 584
+D+VG+ +TGSGKT A+++P I H+ +
Sbjct: 107 RDVVGMARTGSGKTAAFVIPMIEHLKS 133
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 36.7 bits (81), Expect = 0.81
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPP 593
+D+VG+ +TG+GKT AY LP + + PP
Sbjct: 51 RDVVGLAQTGTGKTAAYALPLLQQLTEGPP 80
Score = 35.5 bits (78), Expect = 1.9
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
F E NF + G++T GY+ TPIQ + P + G+
Sbjct: 15 FTEFNFNTQILSGIQTQGYRTATPIQIKAIPAILQGR 51
>UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 642
Score = 36.7 bits (81), Expect = 0.81
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAI 569
+D++G KTGSGKTLA+++PAI
Sbjct: 189 RDVLGAAKTGSGKTLAFLIPAI 210
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 36.7 bits (81), Expect = 0.81
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +1
Query: 388 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 504
+ + + A PD +Q+ + GY +PTPIQA+ P+ M+G
Sbjct: 20 VTFADFALHPD-IQKAIDAQGYTQPTPIQAKAIPVVMTG 57
>UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2;
Gammaproteobacteria|Rep: ATP-dependent rna helicase Rhl
- Dichelobacter nodosus (strain VCS1703A)
Length = 432
Score = 36.7 bits (81), Expect = 0.81
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +3
Query: 507 DLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXE 644
D++G+ +TG+GKT A++L + ++ P + GP A+VL E
Sbjct: 48 DVMGIAQTGTGKTAAFLLSLMHYLMTNPVHPKAKGPWAIVLAPTRE 93
>UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Desulfuromonadales|Rep: DEAD/DEAH box helicase
domain protein - Geobacter bemidjiensis Bem
Length = 482
Score = 36.7 bits (81), Expect = 0.81
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
F E P VQ+G+ G+ + TPIQ + P+A++GK
Sbjct: 3 FTELQIPAEVQKGIDETGFTQCTPIQEKALPLALTGK 39
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 36.7 bits (81), Expect = 0.81
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINN 584
KD++G +TGSGKTLAY+LP I++
Sbjct: 41 KDIIGQSQTGSGKTLAYLLPIFQKIDS 67
>UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD15481p
- Drosophila melanogaster (Fruit fly)
Length = 782
Score = 36.7 bits (81), Expect = 0.81
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +1
Query: 310 KRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWP 489
K++ E EE VE + I F + N + + + +GY PTPIQA P
Sbjct: 130 KKAGEEDEEDEGEKMQFADTVEANEQITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIP 189
Query: 490 IAMSGK 507
+A+ G+
Sbjct: 190 VALLGR 195
>UniRef50_Q5BYX8 Cluster: SJCHGC04912 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04912 protein - Schistosoma
japonicum (Blood fluke)
Length = 200
Score = 36.7 bits (81), Expect = 0.81
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Frame = +1
Query: 310 KRSPYEVEEYRNNHEVTVSGV----EVHNPIQYFEEANF--PDYVQQGVKTMGYKEPTPI 471
K + +++R H + +S V ++ PI F F D + + + YK PTPI
Sbjct: 27 KSKASKAKQFRLCHSIKISAVNKKRKIPPPISSFSSRLFHISDIILHNLCELSYKTPTPI 86
Query: 472 QAQGWPIAMSGKI*LA 519
QAQ P+ M + LA
Sbjct: 87 QAQSIPVMMQSRNLLA 102
>UniRef50_Q234J0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 744
Score = 36.7 bits (81), Expect = 0.81
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQ---PPIRRGDGPIALVL 629
KDL+G +TGSGKTL + LP I + N+ I++ P LV+
Sbjct: 106 KDLIGKDRTGSGKTLGFSLPLIEKLRNEGNFTSIKKKQTPYMLVV 150
>UniRef50_A5K7L1 Cluster: ATP-dependent RNA Helicase, putative; n=1;
Plasmodium vivax|Rep: ATP-dependent RNA Helicase,
putative - Plasmodium vivax
Length = 761
Score = 36.7 bits (81), Expect = 0.81
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRR 602
+D + +TGSGKTL++I+ I+H+ N + R
Sbjct: 292 RDFIASSRTGSGKTLSFIISLIIHLGNYKQVER 324
>UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicase,
putative; n=4; Plasmodium|Rep: DEAD/DEAH box
ATP-dependent RNA helicase, putative - Plasmodium vivax
Length = 599
Score = 36.7 bits (81), Expect = 0.81
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = +3
Query: 504 KDLVGVPKTGSGKTLAYILPAI 569
KD++G KTGSGKTLA+++P+I
Sbjct: 184 KDILGAAKTGSGKTLAFLVPSI 205
>UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n=6;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania infantum
Length = 924
Score = 36.7 bits (81), Expect = 0.81
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 385 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 504
P++ F + + ++ GYK+PTP+Q G P+A+SG
Sbjct: 470 PVEDFADLLVEPALAANIERCGYKKPTPVQRYGIPVALSG 509
Score = 35.1 bits (77), Expect = 2.5
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 507 DLVGVPKTGSGKTLAYILPAIVH--INNQPPIR-RGDGPIALVLGGLXE 644
DL+ +TGSGKT A+++P + + ++ P R R PIALVL E
Sbjct: 511 DLMACAQTGSGKTAAFLIPVVQYMLVHGVSPARQRKSYPIALVLAPTRE 559
>UniRef50_A2E9Y0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 536
Score = 36.7 bits (81), Expect = 0.81
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Frame = +3
Query: 489 DSYVWKDLVGVPKTGSGKTLAYILPAIVHI----NNQPPIRRGDGPIALVL 629
DSY D++G+ + G+GKTLAY++P + +I N P P+++VL
Sbjct: 176 DSY---DIIGLSQPGTGKTLAYVIPLLYYILEYKKNHPETNNFSIPLSVVL 223
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 901,811,543
Number of Sequences: 1657284
Number of extensions: 19070627
Number of successful extensions: 50108
Number of sequences better than 10.0: 457
Number of HSP's better than 10.0 without gapping: 47570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50038
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81981722200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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