BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ps4M0219.Seq (930 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q25804 Cluster: Rps4 protein; n=2; Plasmodium|Rep: Rps4... 35 2.6 >UniRef50_Q25804 Cluster: Rps4 protein; n=2; Plasmodium|Rep: Rps4 protein - Plasmodium falciparum Length = 208 Score = 35.1 bits (77), Expect = 2.6 Identities = 19/72 (26%), Positives = 36/72 (50%) Frame = -2 Query: 800 NQII*HGRSPRWIFTSXLLKR*FIKFYVTFLLNYNYIFTYSHIKFGVIIVHNNYCCITQL 621 N I+ ++I L+ + I Y++ L YN+I YS+ K+ +I ++N I + Sbjct: 132 NDILFFNNKIKYIILKNLIYKYNIYIYISNLYKYNFIKIYSYNKYFIICIYNFKIKILNI 191 Query: 620 HNFFTKKISFVY 585 +N I ++Y Sbjct: 192 NNIL-NNILYIY 202 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 897,294,749 Number of Sequences: 1657284 Number of extensions: 17606264 Number of successful extensions: 32547 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 31343 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 32532 length of database: 575,637,011 effective HSP length: 100 effective length of database: 409,908,611 effective search space used: 85670899699 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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