Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0214.Seq
(886 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9FM14 Cluster: E3 ubiquitin-protein ligase SINA-like 1... 41 0.048
UniRef50_Q0R0E3 Cluster: Ubiquitin ligase 2; n=1; Symbiodinium s... 40 0.064
UniRef50_Q9FKD7 Cluster: E3 ubiquitin-protein ligase SINA-like 7... 40 0.11
UniRef50_UPI00015B4D54 Cluster: PREDICTED: similar to seven in a... 39 0.19
UniRef50_Q4SPT1 Cluster: Chromosome 7 SCAF14536, whole genome sh... 38 0.34
UniRef50_Q7QBU9 Cluster: ENSANGP00000015400; n=2; Endopterygota|... 38 0.34
UniRef50_Q16YR4 Cluster: Putative uncharacterized protein; n=1; ... 38 0.34
UniRef50_Q7PRB6 Cluster: ENSANGP00000015421; n=2; Culicidae|Rep:... 37 0.79
UniRef50_Q5C817 Cluster: SJCHGC04034 protein; n=1; Schistosoma j... 37 0.79
UniRef50_Q5JST9 Cluster: Seven in absentia homolog 1-like; n=3; ... 37 0.79
UniRef50_O43255 Cluster: E3 ubiquitin-protein ligase SIAH2; n=61... 37 0.79
UniRef50_Q5ZCA3 Cluster: SIAH1 protein-like; n=4; Oryza sativa|R... 36 1.0
UniRef50_Q9C9M0 Cluster: E3 ubiquitin-protein ligase SINA-like 4... 36 1.0
UniRef50_Q9C6H3 Cluster: Putative E3 ubiquitin-protein ligase SI... 36 1.4
UniRef50_UPI00015B4D55 Cluster: PREDICTED: similar to SINA1p; n=... 35 2.4
UniRef50_Q59A95 Cluster: Putative membrane-associated lipoprotei... 35 2.4
UniRef50_A4XMT3 Cluster: Putative uncharacterized protein; n=1; ... 35 2.4
UniRef50_Q9AWV4 Cluster: P0044F08.6 protein; n=2; Oryza sativa (... 35 2.4
UniRef50_Q1RLC3 Cluster: Zinc finger protein; n=1; Ciona intesti... 35 2.4
UniRef50_Q9C6H2 Cluster: E3 ubiquitin-protein ligase SINA-like 3... 35 2.4
UniRef50_Q0UNV4 Cluster: Predicted protein; n=1; Phaeosphaeria n... 35 3.2
UniRef50_A7D192 Cluster: ATP-dependent exoDNAse (Exonuclease V) ... 35 3.2
UniRef50_Q9C6H4 Cluster: E3 ubiquitin-protein ligase SINA-like 1... 35 3.2
UniRef50_Q7RAH5 Cluster: Putative uncharacterized protein PY0652... 34 4.2
UniRef50_UPI0000DB730A Cluster: PREDICTED: hypothetical protein;... 34 5.5
UniRef50_UPI00006CF809 Cluster: hypothetical protein TTHERM_0054... 34 5.5
UniRef50_Q4T680 Cluster: Chromosome undetermined SCAF8882, whole... 34 5.5
UniRef50_A3ZSN1 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5
UniRef50_A7QZR2 Cluster: Chromosome undetermined scaffold_285, w... 34 5.5
UniRef50_Q4RSK1 Cluster: Chromosome 13 SCAF15000, whole genome s... 33 7.3
UniRef50_A7QWE3 Cluster: Chromosome undetermined scaffold_203, w... 33 7.3
UniRef50_Q54GU4 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
UniRef50_A5DZX6 Cluster: Predicted protein; n=1; Lodderomyces el... 33 7.3
UniRef50_A7P235 Cluster: Chromosome chr19 scaffold_4, whole geno... 33 9.7
UniRef50_A2Q424 Cluster: Ubiquitin; TRAF-like; n=2; Medicago tru... 33 9.7
UniRef50_Q55BP5 Cluster: DNA topoisomerase 2; n=1; Dictyostelium... 33 9.7
UniRef50_Q058Y8 Cluster: IP10471p; n=4; Sophophora|Rep: IP10471p... 33 9.7
UniRef50_A2EE99 Cluster: GP63-like; n=1; Trichomonas vaginalis G... 33 9.7
UniRef50_Q5KCP1 Cluster: Expressed protein; n=2; Filobasidiella ... 33 9.7
>UniRef50_Q9FM14 Cluster: E3 ubiquitin-protein ligase SINA-like 11;
n=2; Arabidopsis thaliana|Rep: E3 ubiquitin-protein
ligase SINA-like 11 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 314
Score = 40.7 bits (91), Expect = 0.048
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +2
Query: 137 ENKVDELPDLDNLLQCPVCYEIPTGHIFQCNEGHNVC 247
E + +L DLD +L CPVC+E T FQC++GH VC
Sbjct: 29 ETRSAKLLDLD-VLDCPVCFEPLTIPTFQCDDGHIVC 64
>UniRef50_Q0R0E3 Cluster: Ubiquitin ligase 2; n=1; Symbiodinium sp.
C3|Rep: Ubiquitin ligase 2 - Symbiodinium sp. C3
Length = 163
Score = 40.3 bits (90), Expect = 0.064
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Frame = +2
Query: 137 ENKVDELPDLD----NLLQCPVCYEIPTGHIFQCNEGHNVC 247
E ++D L L+ ++L C VC ++PT +FQC GH +C
Sbjct: 35 EKRIDRLGKLEARLNDILSCTVCLDLPTKSVFQCRNGHLMC 75
>UniRef50_Q9FKD7 Cluster: E3 ubiquitin-protein ligase SINA-like 7;
n=4; Arabidopsis thaliana|Rep: E3 ubiquitin-protein
ligase SINA-like 7 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 286
Score = 39.5 bits (88), Expect = 0.11
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +2
Query: 155 LPDLDNLLQCPVCYEIPTGHIFQCNEGHNVC 247
L DL+ +L CP+CYE T IFQC+ GH C
Sbjct: 43 LMDLE-ILDCPICYEAFTIPIFQCDNGHLAC 72
>UniRef50_UPI00015B4D54 Cluster: PREDICTED: similar to seven in
absentia, putative; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to seven in absentia, putative -
Nasonia vitripennis
Length = 307
Score = 38.7 bits (86), Expect = 0.19
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +2
Query: 161 DLDNLLQCPVCYEIPTGHIFQCNEGHNVCGRLKF 262
DL+ +LQC VC+E + I C +GH+VCG +F
Sbjct: 20 DLEEILQCRVCFERLSIPIPLCIQGHHVCGSCRF 53
Score = 37.5 bits (83), Expect = 0.45
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +1
Query: 256 KVRLSVCPVCRALFFGTRNYAMEELIANVRKLRAFKLGGKVTRGLLASDSSST 414
+ ++ CP C++ F GTRNY E LI +++ + + ++ + S+S+ T
Sbjct: 52 RFQMPACPFCKSDFNGTRNYLAETLIGKFDEIKTSLIENRTSQRTVVSNSTQT 104
>UniRef50_Q4SPT1 Cluster: Chromosome 7 SCAF14536, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 7
SCAF14536, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 362
Score = 37.9 bits (84), Expect = 0.34
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 152 ELPDLDNLLQCPVCYEIPTGHIFQCNEGHNVC 247
+ P+L L +CPVC++ I QC GH VC
Sbjct: 40 QTPELTALFECPVCFDYVLPPILQCQAGHLVC 71
>UniRef50_Q7QBU9 Cluster: ENSANGP00000015400; n=2;
Endopterygota|Rep: ENSANGP00000015400 - Anopheles
gambiae str. PEST
Length = 212
Score = 37.9 bits (84), Expect = 0.34
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 176 LQCPVCYEIPTGHIFQCNEGHNVCGRLK 259
L+CPVC++ +FQC GH VC R +
Sbjct: 138 LECPVCFDTIPPPVFQCQNGHLVCSRCR 165
>UniRef50_Q16YR4 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 459
Score = 37.9 bits (84), Expect = 0.34
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 176 LQCPVCYEIPTGHIFQCNEGHNVCGRLK 259
L+CPVC++ +FQC GH VC R +
Sbjct: 156 LECPVCFDTIPPPVFQCQNGHLVCSRCR 183
>UniRef50_Q7PRB6 Cluster: ENSANGP00000015421; n=2; Culicidae|Rep:
ENSANGP00000015421 - Anopheles gambiae str. PEST
Length = 245
Score = 36.7 bits (81), Expect = 0.79
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 155 LPDLDNLLQCPVCYEIPTGHIFQCNEGHNVC 247
L + LL+CP+C E+ +QCN GH +C
Sbjct: 164 LQGIAGLLECPICLEVIRPPSWQCNHGHLIC 194
>UniRef50_Q5C817 Cluster: SJCHGC04034 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04034 protein - Schistosoma
japonicum (Blood fluke)
Length = 246
Score = 36.7 bits (81), Expect = 0.79
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 119 IMSXIVENKVDELP-DLDNLLQCPVCYEIPTGHIFQCNEGHNVC 247
+ S + N D DL +L +CPVC + I QC GH VC
Sbjct: 111 VCSILPHNNSDSSSIDLASLFECPVCMDYALPPIMQCQSGHIVC 154
>UniRef50_Q5JST9 Cluster: Seven in absentia homolog 1-like; n=3;
Mammalia|Rep: Seven in absentia homolog 1-like - Homo
sapiens (Human)
Length = 277
Score = 36.7 bits (81), Expect = 0.79
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +2
Query: 161 DLDNLLQCPVCYEIPTGHIFQCNEGHNVC 247
DL ++ QCPVC + I QC GH VC
Sbjct: 29 DLASIFQCPVCLDYALPPILQCERGHLVC 57
>UniRef50_O43255 Cluster: E3 ubiquitin-protein ligase SIAH2; n=612;
Eumetazoa|Rep: E3 ubiquitin-protein ligase SIAH2 - Homo
sapiens (Human)
Length = 324
Score = 36.7 bits (81), Expect = 0.79
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 161 DLDNLLQCPVCYEIPTGHIFQCNEGHNVCGRLK 259
+L +L +CPVC++ I QC GH VC + +
Sbjct: 73 ELTSLFECPVCFDYVLPPILQCQAGHLVCNQCR 105
>UniRef50_Q5ZCA3 Cluster: SIAH1 protein-like; n=4; Oryza sativa|Rep:
SIAH1 protein-like - Oryza sativa subsp. japonica (Rice)
Length = 417
Score = 36.3 bits (80), Expect = 1.0
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 173 LLQCPVCYEIPTGHIFQCNEGHNVC 247
+L CPVC++I +FQC+ GH VC
Sbjct: 36 VLHCPVCFQILRPPVFQCDLGHLVC 60
>UniRef50_Q9C9M0 Cluster: E3 ubiquitin-protein ligase SINA-like 4;
n=1; Arabidopsis thaliana|Rep: E3 ubiquitin-protein
ligase SINA-like 4 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 329
Score = 36.3 bits (80), Expect = 1.0
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 155 LPDLDNLLQCPVCYEIPTGHIFQCNEGHNVC 247
LP+ N+L+CP C++ IFQCN GH C
Sbjct: 78 LPN-SNVLECPNCFDPLKKPIFQCNNGHLAC 107
>UniRef50_Q9C6H3 Cluster: Putative E3 ubiquitin-protein ligase
SINA-like 2; n=4; Brassicaceae|Rep: Putative E3
ubiquitin-protein ligase SINA-like 2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 313
Score = 35.9 bits (79), Expect = 1.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 170 NLLQCPVCYEIPTGHIFQCNEGHNVC 247
+LL CP+C T IFQC+ GH C
Sbjct: 40 DLLDCPICCHALTSPIFQCDNGHIAC 65
>UniRef50_UPI00015B4D55 Cluster: PREDICTED: similar to SINA1p; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to SINA1p -
Nasonia vitripennis
Length = 173
Score = 35.1 bits (77), Expect = 2.4
Identities = 11/39 (28%), Positives = 26/39 (66%)
Frame = +2
Query: 131 IVENKVDELPDLDNLLQCPVCYEIPTGHIFQCNEGHNVC 247
+V+ ++ ++++++ CP+CYE ++ C+ GH+VC
Sbjct: 9 LVQRCIERTQEVEDVICCPICYE-TKDNVVLCSVGHHVC 46
>UniRef50_Q59A95 Cluster: Putative membrane-associated lipoprotein;
n=1; Ornithobacterium rhinotracheale|Rep: Putative
membrane-associated lipoprotein - Ornithobacterium
rhinotracheale
Length = 379
Score = 35.1 bits (77), Expect = 2.4
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 415 PARDSGSDNAEYLGEDENNDNQNSVV 492
P D G++N E G++EN DN NSVV
Sbjct: 46 PKADDGNENPENTGDEENGDNTNSVV 71
>UniRef50_A4XMT3 Cluster: Putative uncharacterized protein; n=1;
Caldicellulosiruptor saccharolyticus DSM 8903|Rep:
Putative uncharacterized protein - Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903)
Length = 121
Score = 35.1 bits (77), Expect = 2.4
Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +1
Query: 490 VAPNPCKDFFVASG--CKNGNSIRLPGSSFT*PPSLTFILPELLEGR 624
V P C+ F V CK GNS L G SF P F LP L+GR
Sbjct: 75 VRPLICRLFGVVKEMECKYGNSYELDGESFLSPHEEYFFLPNFLKGR 121
>UniRef50_Q9AWV4 Cluster: P0044F08.6 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: P0044F08.6 protein -
Oryza sativa subsp. japonica (Rice)
Length = 104
Score = 35.1 bits (77), Expect = 2.4
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 170 NLLQCPVCYEIPTGHIFQCNEGHNVC 247
++L CPVC+E IFQC+ GH +C
Sbjct: 21 DVLDCPVCFEPFKPPIFQCSVGHFIC 46
>UniRef50_Q1RLC3 Cluster: Zinc finger protein; n=1; Ciona
intestinalis|Rep: Zinc finger protein - Ciona
intestinalis (Transparent sea squirt)
Length = 330
Score = 35.1 bits (77), Expect = 2.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 164 LDNLLQCPVCYEIPTGHIFQCNEGHNVC 247
L+++L C VC ++PT QC GH +C
Sbjct: 41 LNHILSCTVCLDLPTSACMQCCHGHLMC 68
>UniRef50_Q9C6H2 Cluster: E3 ubiquitin-protein ligase SINA-like 3;
n=1; Arabidopsis thaliana|Rep: E3 ubiquitin-protein
ligase SINA-like 3 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 303
Score = 35.1 bits (77), Expect = 2.4
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 155 LPDLDNLLQCPVCYEIPTGHIFQCNEGHNVC 247
L +LD LL CP+CY I+QC+ GH C
Sbjct: 41 LLELD-LLDCPICYHKLGAPIYQCDNGHIAC 70
>UniRef50_Q0UNV4 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 484
Score = 34.7 bits (76), Expect = 3.2
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 373 KVTRGLLASDSSSTPARDSGSDNAEYLGEDENNDNQNSVVAPNP 504
K RGL DS S A DS D +EY +DE +D + + A P
Sbjct: 288 KAPRGLKREDSDSDSATDSSDDESEYT-DDEEDDEPSPLPAARP 330
>UniRef50_A7D192 Cluster: ATP-dependent exoDNAse (Exonuclease V)
beta subunit (Contains helicase and exonuclease
domains)-like protein; n=1; Halorubrum lacusprofundi
ATCC 49239|Rep: ATP-dependent exoDNAse (Exonuclease V)
beta subunit (Contains helicase and exonuclease
domains)-like protein - Halorubrum lacusprofundi ATCC
49239
Length = 1227
Score = 34.7 bits (76), Expect = 3.2
Identities = 17/37 (45%), Positives = 27/37 (72%), Gaps = 2/37 (5%)
Frame = +1
Query: 397 SDSSSTPARDSGSDNAEYLGEDENND--NQNSVVAPN 501
SDS+S A+DSGSD+A+ G D ND +++++V P+
Sbjct: 837 SDSASDSAKDSGSDSAKDSGSDSANDSADRDALVGPD 873
>UniRef50_Q9C6H4 Cluster: E3 ubiquitin-protein ligase SINA-like 1;
n=2; Arabidopsis thaliana|Rep: E3 ubiquitin-protein
ligase SINA-like 1 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 366
Score = 34.7 bits (76), Expect = 3.2
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 170 NLLQCPVCYEIPTGHIFQCNEGHNVC 247
+LL CP+C T IFQC++GH C
Sbjct: 52 DLLDCPICCNALTIPIFQCDKGHIAC 77
>UniRef50_Q7RAH5 Cluster: Putative uncharacterized protein PY06525;
n=1; Plasmodium yoelii yoelii|Rep: Putative
uncharacterized protein PY06525 - Plasmodium yoelii
yoelii
Length = 490
Score = 34.3 bits (75), Expect = 4.2
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +1
Query: 280 VCRALFFGTRNYAMEELIANVRKLRAFKLGGKVTRGLLASDSSSTPARDSGSDNAEYLGE 459
+ R LF R A+ L+ N+ L + G T G +D + G+DN + +G
Sbjct: 310 IMRNLFIQNRIIALNYLLCNIFSLGKYPGGKGNTNGKSDTDGNDNNDDVGGNDNNDDVGG 369
Query: 460 DENNDN 477
++NND+
Sbjct: 370 NDNNDD 375
>UniRef50_UPI0000DB730A Cluster: PREDICTED: hypothetical protein;
n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
- Apis mellifera
Length = 178
Score = 33.9 bits (74), Expect = 5.5
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +1
Query: 394 ASDSSSTPARDSGSDNAEYLGEDENNDNQNSVVAPNPCKDFFVASGCKNGNSIRLP 561
+S SSS+ + S S ++ + NN+N N+ N K FVA C N ++I P
Sbjct: 75 SSSSSSSSSSSSSSSSSSSSNSNSNNNNNNNNNNNNNNKTPFVALECHNTDTIEQP 130
>UniRef50_UPI00006CF809 Cluster: hypothetical protein TTHERM_00543660;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00543660 - Tetrahymena thermophila SB210
Length = 1166
Score = 33.9 bits (74), Expect = 5.5
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 137 ENKVDELPDLDNLLQCPVCYEIPTGHIFQCNEGHNVC 247
E K +L D+D+ C +C + P +FQC GH +C
Sbjct: 1103 EQKQSQLEDIDSKPTCRICLDNPPQVVFQC--GHTMC 1137
>UniRef50_Q4T680 Cluster: Chromosome undetermined SCAF8882, whole
genome shotgun sequence; n=3; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF8882,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 283
Score = 33.9 bits (74), Expect = 5.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 161 DLDNLLQCPVCYEIPTGHIFQCNEGHNV 244
DL +L +CPVC++ I QC GH V
Sbjct: 34 DLASLFECPVCFDYVLPPILQCQSGHLV 61
>UniRef50_A3ZSN1 Cluster: Putative uncharacterized protein; n=1;
Blastopirellula marina DSM 3645|Rep: Putative
uncharacterized protein - Blastopirellula marina DSM
3645
Length = 307
Score = 33.9 bits (74), Expect = 5.5
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -3
Query: 641 YSTXSARPSKSSGRMKVSEGG*VNELPGSLMEFPFLQPEATKKSLHGL 498
+ T A P++SSG GG V+ L G+ PF++ +A +L G+
Sbjct: 18 HDTFGAFPARSSGTGAPGTGGEVSRLSGTFFLLPFMEQQALYDNLRGI 65
>UniRef50_A7QZR2 Cluster: Chromosome undetermined scaffold_285,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_285, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 90
Score = 33.9 bits (74), Expect = 5.5
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +2
Query: 131 IVENKVDELPDLDNLLQCPVCYEIPTGHIFQCNEGHNVCGRLK 259
+V + + LL+CPVC I QC+ GH +C K
Sbjct: 27 VVPSATAPATSVHELLECPVCTNYMYPPIHQCHNGHTLCSTYK 69
>UniRef50_Q4RSK1 Cluster: Chromosome 13 SCAF15000, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 13
SCAF15000, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 411
Score = 33.5 bits (73), Expect = 7.3
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Frame = -1
Query: 520 RKSPYMG*GPLLNFDYRY--FHLHPNILHC 437
+K+PYM G L+ F +Y + HPNI HC
Sbjct: 73 KKTPYMTLGDLMEFTLQYGDVYFHPNIYHC 102
>UniRef50_A7QWE3 Cluster: Chromosome undetermined scaffold_203,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_203, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 265
Score = 33.5 bits (73), Expect = 7.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 173 LLQCPVCYEIPTGHIFQCNEGHNVCGRLK 259
LL+C VC++ I+ C+ GH +C K
Sbjct: 45 LLKCSVCFDFMYSPIYHCHNGHTLCSSCK 73
>UniRef50_Q54GU4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1032
Score = 33.5 bits (73), Expect = 7.3
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = +1
Query: 430 GSDNAEYLGEDENNDNQNSVVAPNPCKDFFVASGCKNGNSIRLPGSSFT*PPSLTFILPE 609
G+ N +L + NN+N N+ N + + N N+I + + PSL+ +
Sbjct: 43 GNFNTNFLNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNIIISSPILSASPSLSPRFQD 102
Query: 610 LLEGRAEXVEYLQSMGRSPP 669
+LE + + S+ SPP
Sbjct: 103 ILENNSVSINIQSSISESPP 122
>UniRef50_A5DZX6 Cluster: Predicted protein; n=1; Lodderomyces
elongisporus NRRL YB-4239|Rep: Predicted protein -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 184
Score = 33.5 bits (73), Expect = 7.3
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +1
Query: 433 SDNAEYLGEDENNDNQNSVVAPNPCKDFFVASGCKNGNSIRLPGSSFT*PPSLTFILPEL 612
SD ++ EDE D + SVV+PN ++ ++G + +SI+ P S F P + P +
Sbjct: 68 SDEEDFYAEDE--DGEGSVVSPNKVLSYYQSNG--SADSIKQPTSYFNTPSKRLSLNPHM 123
>UniRef50_A7P235 Cluster: Chromosome chr19 scaffold_4, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr19 scaffold_4, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 88
Score = 33.1 bits (72), Expect = 9.7
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 173 LLQCPVCYEIPTGHIFQCNEGHNVCGRLKFG 265
LL+CPVC I QC+ GH +C G
Sbjct: 51 LLECPVCTNSMYPPIHQCHNGHTLCSTCMLG 81
>UniRef50_A2Q424 Cluster: Ubiquitin; TRAF-like; n=2; Medicago
truncatula|Rep: Ubiquitin; TRAF-like - Medicago
truncatula (Barrel medic)
Length = 343
Score = 33.1 bits (72), Expect = 9.7
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +2
Query: 173 LLQCPVCYEIPTGHIFQCNEGHNVCGRL--KFG 265
+ C +C+++ + IFQC+ GH VC KFG
Sbjct: 25 VFDCSICFQLLSFPIFQCDNGHIVCSTCCSKFG 57
>UniRef50_Q55BP5 Cluster: DNA topoisomerase 2; n=1; Dictyostelium
discoideum AX4|Rep: DNA topoisomerase 2 - Dictyostelium
discoideum AX4
Length = 1521
Score = 33.1 bits (72), Expect = 9.7
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +1
Query: 373 KVTRGLLASDSSSTPARDSGSDNAEYLGEDENNDNQNSVVAPNPCKDFFVASGCKNGNSI 552
K T ++ ST ++ S SDN ++ G+D+++ + N V N +AS K G SI
Sbjct: 50 KATTTTTSTTKKSTTSKKSESDNDDFSGDDKSSSSDNENVFKN------IASSAKKGKSI 103
>UniRef50_Q058Y8 Cluster: IP10471p; n=4; Sophophora|Rep: IP10471p -
Drosophila melanogaster (Fruit fly)
Length = 484
Score = 33.1 bits (72), Expect = 9.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 155 LPDLDNLLQCPVCYEIPTGHIFQCNEGHNVCGRLK 259
L + LL+CPVC E+ +QC GH +C +
Sbjct: 37 LQHISQLLECPVCLEVIKPPGWQCCNGHVLCNNCR 71
>UniRef50_A2EE99 Cluster: GP63-like; n=1; Trichomonas vaginalis
G3|Rep: GP63-like - Trichomonas vaginalis G3
Length = 490
Score = 33.1 bits (72), Expect = 9.7
Identities = 31/104 (29%), Positives = 40/104 (38%), Gaps = 2/104 (1%)
Frame = -3
Query: 425 SLAGVLLLSEANNPLVTFPPNLKALSFRTFAMSSSMA*FLVPKNSALHTGQTESRTLICH 246
S+ G L E NNP + FP LK T S +L N + I H
Sbjct: 239 SVLGNLYFDELNNPPINFPSKLKFTELDTMYPSFDFRGYLNSTNYGANRINFTRDQNIDH 298
Query: 245 IHYD-LHCIGKYDL*GFHNILDTEVS-YPSLAIRQPYFQLXPTL 120
+Y+ IGKY + +L E S P AI Y L T+
Sbjct: 299 YYYENTTVIGKYKHYDYSPLLIPEYSCSPDWAIVTTYNNLTTTV 342
>UniRef50_Q5KCP1 Cluster: Expressed protein; n=2; Filobasidiella
neoformans|Rep: Expressed protein - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 912
Score = 33.1 bits (72), Expect = 9.7
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +1
Query: 403 SSSTPARDSGSDNAEYLGEDENNDNQNSVVAPNPCKDFFVASGCKNGN 546
SS P S SD+A+Y + + N ++ PCK F A+GC NG+
Sbjct: 742 SSPEPLSSSDSDSADYKPKGQGNRRLKTL----PCKFFNSAAGCINGD 785
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 841,190,050
Number of Sequences: 1657284
Number of extensions: 16491055
Number of successful extensions: 44331
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43868
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79522270534
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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