Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0173.Seq
         (822 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L...    81   3e-14
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet...    81   3e-14
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ...    80   6e-14
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ...    70   8e-11
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo...    61   4e-08
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:...    53   8e-06
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp...    51   3e-05
UniRef50_Q8GEF9 Cluster: Putative uncharacterized protein; n=1; ...    50   5e-05
UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8; Bacteria...    48   4e-04
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ...    46   0.002
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba...    46   0.002
UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp. ...    33   6.5  

>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
           protein - Phage M13mp18
          Length = 102

 Score = 81.0 bits (191), Expect = 3e-14
 Identities = 35/39 (89%), Positives = 37/39 (94%)
 Frame = +3

Query: 93  VTQLNRLAAHPPFASWRNSEEARTDXPSQQLRTCNGEWQ 209
           VTQLNRLAAHPPFASWRNSEEARTD PSQQLR+ NGEW+
Sbjct: 40  VTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWR 78


>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
           Beta-galactosidase - Escherichia coli (strain K12)
          Length = 1024

 Score = 81.0 bits (191), Expect = 3e-14
 Identities = 35/39 (89%), Positives = 37/39 (94%)
 Frame = +3

Query: 93  VTQLNRLAAHPPFASWRNSEEARTDXPSQQLRTCNGEWQ 209
           VTQLNRLAAHPPFASWRNSEEARTD PSQQLR+ NGEW+
Sbjct: 22  VTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWR 60


>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
           Erwinia amylovora|Rep: Putative uncharacterized protein
           - Erwinia amylovora (Fire blight bacteria)
          Length = 123

 Score = 80.2 bits (189), Expect = 6e-14
 Identities = 35/39 (89%), Positives = 36/39 (92%)
 Frame = +3

Query: 93  VTQLNRLAAHPPFASWRNSEEARTDXPSQQLRTCNGEWQ 209
           VTQLNRLAAHPPFASWRNSEEARTD PSQQLR  NGEW+
Sbjct: 82  VTQLNRLAAHPPFASWRNSEEARTDRPSQQLRXLNGEWR 120


>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
           organisms|Rep: LacZ-alpha peptide - Escherichia coli
          Length = 90

 Score = 69.7 bits (163), Expect = 8e-11
 Identities = 31/33 (93%), Positives = 32/33 (96%)
 Frame = +3

Query: 93  VTQLNRLAAHPPFASWRNSEEARTDXPSQQLRT 191
           VTQLNRLAAHPPFASWRNSEEARTD PSQQLR+
Sbjct: 36  VTQLNRLAAHPPFASWRNSEEARTDRPSQQLRS 68


>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
           Eukaryota|Rep: beta-galactosidase - Entamoeba
           histolytica HM-1:IMSS
          Length = 86

 Score = 60.9 bits (141), Expect = 4e-08
 Identities = 30/48 (62%), Positives = 34/48 (70%)
 Frame = +3

Query: 48  HWPSFYNIVTGKTLAVTQLNRLAAHPPFASWRNSEEARTDXPSQQLRT 191
           HWPSFYN+VTGKTLA+  L  L   P   +   SEEARTD PSQQLR+
Sbjct: 5   HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVISEEARTDRPSQQLRS 52


>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
           Beta-galactosidase - Yersinia pseudotuberculosis
          Length = 1066

 Score = 53.2 bits (122), Expect = 8e-06
 Identities = 22/38 (57%), Positives = 27/38 (71%)
 Frame = +3

Query: 93  VTQLNRLAAHPPFASWRNSEEARTDXPSQQLRTCNGEW 206
           +TQ +RL AHPPF SWR+ E A+ D PS Q +T NG W
Sbjct: 29  ITQYHRLEAHPPFHSWRDVESAQKDRPSPQQQTLNGLW 66


>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
           spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
           spumigena CCY 9414
          Length = 72

 Score = 51.2 bits (117), Expect = 3e-05
 Identities = 20/26 (76%), Positives = 24/26 (92%)
 Frame = +3

Query: 138 WRNSEEARTDXPSQQLRTCNGEWQIV 215
           WRNSEEARTD PSQQLR+ NGEW+++
Sbjct: 47  WRNSEEARTDRPSQQLRSLNGEWRLM 72


>UniRef50_Q8GEF9 Cluster: Putative uncharacterized protein; n=1;
           Erwinia amylovora|Rep: Putative uncharacterized protein
           - Erwinia amylovora (Fire blight bacteria)
          Length = 99

 Score = 50.4 bits (115), Expect = 5e-05
 Identities = 27/39 (69%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
 Frame = +2

Query: 674 FSGKXARNPYLFXXLNTFKYVSVXD-ITPINAS*YXKXE 787
           FSGK ARNPYLF  LNTFKYVS  + IT INAS   K E
Sbjct: 26  FSGKCARNPYLFIFLNTFKYVSAHETITLINASIILKKE 64


>UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8;
           Bacteria|Rep: 50S ribosomal protein L5 - Moritella sp.
           PE36
          Length = 45

 Score = 47.6 bits (108), Expect = 4e-04
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = -2

Query: 215 YNLPFAIAGAQLLGRAIGAGLFAITPAGERG 123
           +  PFAI  AQLLGRAIGAGLFAITP  E G
Sbjct: 8   HQAPFAIQAAQLLGRAIGAGLFAITPEFELG 38


>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
           Enterobacter sakazakii ATCC BAA-894|Rep: Putative
           uncharacterized protein - Enterobacter sakazakii ATCC
           BAA-894
          Length = 1043

 Score = 45.6 bits (103), Expect = 0.002
 Identities = 17/40 (42%), Positives = 26/40 (65%)
 Frame = +3

Query: 90  AVTQLNRLAAHPPFASWRNSEEARTDXPSQQLRTCNGEWQ 209
           A+T +NRL +H P   WR+++ AR   PS  + + +GEWQ
Sbjct: 31  AITSVNRLPSHTPLHGWRDADRARRGEPSDAVLSLDGEWQ 70


>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
           Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
           pneumoniae
          Length = 1034

 Score = 45.6 bits (103), Expect = 0.002
 Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
 Frame = +3

Query: 48  HWPSFYNIVTGK---TLAVTQLNRLAAHPPFASWRNSEEARTDXPSQQLRTCNG 200
           H P F+ ++  +      +T LNRL AHP FASWR+   AR + PS + R  +G
Sbjct: 10  HTPDFHAVLAREDWHNQTITHLNRLPAHPVFASWRDELAARDNLPSSRRRQLDG 63


>UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp.
           SS|Rep: LacZ alpha peptide - Beggiatoa sp. SS
          Length = 73

 Score = 33.5 bits (73), Expect = 6.5
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = -1

Query: 492 FRFSALRHLDPKKL 451
           FRFSALRHLDPKKL
Sbjct: 59  FRFSALRHLDPKKL 72


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 678,743,954
Number of Sequences: 1657284
Number of extensions: 12774154
Number of successful extensions: 26671
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 25951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26661
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 70914189703
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)