Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0093.Seq
         (648 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B624E Cluster: PREDICTED: similar to vacuolar s...    81   2e-14
UniRef50_Q7QGV1 Cluster: ENSANGP00000012567; n=2; Anopheles gamb...    44   0.003
UniRef50_Q4SXE3 Cluster: Chromosome undetermined SCAF12445, whol...    36   1.1  
UniRef50_O44328 Cluster: Receptor tyrosine phosphatase; n=6; Eum...    33   4.5  
UniRef50_P23468 Cluster: Receptor-type tyrosine-protein phosphat...    33   4.5  

>UniRef50_UPI00015B624E Cluster: PREDICTED: similar to vacuolar
            sorting protein (vps); n=1; Nasonia vitripennis|Rep:
            PREDICTED: similar to vacuolar sorting protein (vps) -
            Nasonia vitripennis
          Length = 4076

 Score = 81.4 bits (192), Expect = 2e-14
 Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 5/202 (2%)
 Frame = +1

Query: 7    YAKRDPVKIQTNNITITDLPPGRRSEHRHTSLQSVDIRRTIHAAVKNRSEPDETLN-LTA 183
            Y   D    ++N   +  L PG R     T+ +   + +        + +P  T+  L  
Sbjct: 1762 YPLLDTYSTKSNTYVVDGLAPGTRYTFEVTATKKNYVGKASSITGMTKDQPLPTVTILEP 1821

Query: 184  MLLKEKRTSVHLAWDPPKGAAIQNXELLYEVHYSNVIXRLNPXDMSNDTKIITKXTSVQI 363
             LLK   T+V L+WDPPKG   +  +  Y VHY+     LN  D+    K+IT   +  I
Sbjct: 1822 HLLKSHGTTVKLSWDPPKGT--RKVKWQYAVHYA-----LNMQDVYKAPKLITTNLTATI 1874

Query: 364  DNLXECESYSFTVGLL----XGPXAXIIXIVTRENAKAPVKNLIAVYDXXXAAXXITWDA 531
             +L  CE Y F VG+      G  +  + + T  NAKAP K L            ++W +
Sbjct: 1875 RDLEACEYYIFAVGVKGDYGAGSLSQPVTVATHFNAKAPPKRLRVSRAEKADTMIVSWSS 1934

Query: 532  NCDAYXTQLPYXLTITXATWDR 597
            +C      + Y +T+T  T ++
Sbjct: 1935 SCPTIDEPIAYTITVTEMTLNK 1956


>UniRef50_Q7QGV1 Cluster: ENSANGP00000012567; n=2; Anopheles gambiae
            str. PEST|Rep: ENSANGP00000012567 - Anopheles gambiae
            str. PEST
          Length = 2184

 Score = 44.0 bits (99), Expect = 0.003
 Identities = 39/143 (27%), Positives = 60/143 (41%), Gaps = 7/143 (4%)
 Frame = +1

Query: 190  LKEKRTSVHLA-WDPPKGAAIQNXELLYEVHYSNVIXRLNPXDMSNDTKIITKXTSVQID 366
            LKEK     L  WD PKG  +   +L+Y V+Y   +  L         +I T   S+++ 
Sbjct: 1807 LKEKTDQYALLQWDEPKG--LDTSKLVYGVYYGTSMDAL-----FEAARINTTARSIKLA 1859

Query: 367  NLXECESYSFTVGLL----XGPXA-XIIXIVTRENAKAPVKNLIAVYDXXXAAXXITWDA 531
             L  C+SY  +VG++     GP     + + T  N   P K L    +       I W  
Sbjct: 1860 GLMPCQSYLVSVGIVGPIGPGPLGRNPLKLETAYNRTLPPKELTVDINETSQEMTIEWQH 1919

Query: 532  NCDAYXTQLP-YXLTITXATWDR 597
            +C    T  P Y +T+   T ++
Sbjct: 1920 SCALDLTAYPAYIITVRELTLNK 1942


>UniRef50_Q4SXE3 Cluster: Chromosome undetermined SCAF12445, whole
           genome shotgun sequence; n=2; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF12445,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 2225

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
 Frame = +1

Query: 25  VKIQTNNITITDLPPGRRSEHRHTSLQSVDIRRTIHAAVKNRSEPDETLNLTAMLLKEKR 204
           V +Q+    + D  P    +   ++        T+     +   PD  L L  + L+EK 
Sbjct: 625 VLVQSTGAPLADPDPDADPDPDRSAFLVATFTTTVATTTSSTEAPD--LALRELRLQEKT 682

Query: 205 T-SVHLAWDPPKGAAIQNXELLY 270
             S+HL+W PP  + +Q+  L Y
Sbjct: 683 PFSIHLSWQPPHTSTLQHYRLSY 705


>UniRef50_O44328 Cluster: Receptor tyrosine phosphatase; n=6;
            Eumetazoa|Rep: Receptor tyrosine phosphatase - Hirudo
            medicinalis (Medicinal leech)
          Length = 2051

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 30/123 (24%), Positives = 44/123 (35%), Gaps = 4/123 (3%)
 Frame = +1

Query: 172  NLTAMLLKEKRTSVHLAWDPPKGAAIQNXELLYEVHYSNVIXRLNPXDMSNDTKIITKXT 351
            NL+A +L      +H  WDPP          +YEV Y          D   D  + T  T
Sbjct: 940  NLSAAVLGAHTIRLH--WDPPVKKLRHGVIQMYEVVY------CESDDPGQDVMVNTTET 991

Query: 352  SVQIDNLXECESYSFTVGLL----XGPXAXIIXIVTRENAKAPVKNLIAVYDXXXAAXXI 519
            S+ +D L    SY+F V         P    +   T  +   P    I +      +  +
Sbjct: 992  SLVVDKLEADRSYTFIVRAFTSAGGSPWTNRVIKATSSSTALPAPLNIRLRQTSVTSMEV 1051

Query: 520  TWD 528
            +WD
Sbjct: 1052 SWD 1054


>UniRef50_P23468 Cluster: Receptor-type tyrosine-protein phosphatase
           delta precursor; n=183; Eumetazoa|Rep: Receptor-type
           tyrosine-protein phosphatase delta precursor - Homo
           sapiens (Human)
          Length = 1912

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +1

Query: 157 PDETLNLTAMLLKEKRTSVHLAWDPPKGAAIQNXELLYE 273
           P + LN  A    E  TS+ L+W PP+   I N EL+Y+
Sbjct: 516 PGQPLNFKAE--PESETSILLSWTPPRSDTIANYELVYK 552


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.317    0.131    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,558,892
Number of Sequences: 1657284
Number of extensions: 9798529
Number of successful extensions: 20639
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20629
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)