Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0073.Seq
(851 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 70 9e-11
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 66 1e-09
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 66 1e-09
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 66 1e-09
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 66 1e-09
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp... 50 6e-05
UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8; Bacteria... 48 4e-04
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 47 7e-04
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 40 0.079
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 40 0.079
UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp. ... 38 0.32
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 36 1.3
UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus la... 36 1.3
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba... 35 2.3
UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma j... 34 4.0
UniRef50_A0D095 Cluster: Chromosome undetermined scaffold_33, wh... 34 4.0
UniRef50_A1V9J8 Cluster: Two component, sigma54 specific, transc... 33 6.9
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 69.7 bits (163), Expect = 9e-11
Identities = 35/54 (64%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Frame = +1
Query: 166 HWPSFYNVVTGKTLALPNLIALQHIPLSPAA**RRGPHRS-PFPTVAXPEWRMA 324
HWPSFYNVVTGKTLALPNLIALQHIPLSPA P + +WRMA
Sbjct: 5 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVISEEARTDRPSQQLRSLKWRMA 58
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 65.7 bits (153), Expect = 1e-09
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +3
Query: 168 LAVVLQRRDWENPGVTQLNRLAAHPPFAS 254
LAVVLQRRDWENPGVTQLNRLAAHPPFAS
Sbjct: 68 LAVVLQRRDWENPGVTQLNRLAAHPPFAS 96
Score = 52.8 bits (121), Expect = 1e-05
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +2
Query: 242 PFRQRRNSEEARTDRPSQQLRXLNGEWQ 325
PF RNSEEARTDRPSQQLR LNGEW+
Sbjct: 93 PFASWRNSEEARTDRPSQQLRXLNGEWR 120
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 65.7 bits (153), Expect = 1e-09
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +3
Query: 168 LAVVLQRRDWENPGVTQLNRLAAHPPFAS 254
LAVVLQRRDWENPGVTQLNRLAAHPPFAS
Sbjct: 22 LAVVLQRRDWENPGVTQLNRLAAHPPFAS 50
Score = 41.1 bits (92), Expect = 0.034
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = +2
Query: 242 PFRQRRNSEEARTDRPSQQLRXL 310
PF RNSEEARTDRPSQQLR L
Sbjct: 47 PFASWRNSEEARTDRPSQQLRSL 69
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 65.7 bits (153), Expect = 1e-09
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +3
Query: 168 LAVVLQRRDWENPGVTQLNRLAAHPPFAS 254
LAVVLQRRDWENPGVTQLNRLAAHPPFAS
Sbjct: 26 LAVVLQRRDWENPGVTQLNRLAAHPPFAS 54
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = +2
Query: 242 PFRQRRNSEEARTDRPSQQLRXLNGEWQ 325
PF RNSEEARTDRPSQQLR LNGEW+
Sbjct: 51 PFASWRNSEEARTDRPSQQLRSLNGEWR 78
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 65.7 bits (153), Expect = 1e-09
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +3
Query: 168 LAVVLQRRDWENPGVTQLNRLAAHPPFAS 254
LAVVLQRRDWENPGVTQLNRLAAHPPFAS
Sbjct: 8 LAVVLQRRDWENPGVTQLNRLAAHPPFAS 36
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = +2
Query: 242 PFRQRRNSEEARTDRPSQQLRXLNGEWQ 325
PF RNSEEARTDRPSQQLR LNGEW+
Sbjct: 33 PFASWRNSEEARTDRPSQQLRSLNGEWR 60
>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
spumigena CCY 9414
Length = 72
Score = 50.4 bits (115), Expect = 6e-05
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = +2
Query: 257 RNSEEARTDRPSQQLRXLNGEWQIV 331
RNSEEARTDRPSQQLR LNGEW+++
Sbjct: 48 RNSEEARTDRPSQQLRSLNGEWRLM 72
>UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8;
Bacteria|Rep: 50S ribosomal protein L5 - Moritella sp.
PE36
Length = 45
Score = 47.6 bits (108), Expect = 4e-04
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = -2
Query: 331 YNLPFAIQXAQLLGRAIGAGLFAITP 254
+ PFAIQ AQLLGRAIGAGLFAITP
Sbjct: 8 HQAPFAIQAAQLLGRAIGAGLFAITP 33
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 46.8 bits (106), Expect = 7e-04
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +3
Query: 168 LAVVLQRRDWENPGVTQLNRLAAHPPFAS 254
L +L RRDWENP +TQ +RL AHPPF S
Sbjct: 15 LPQILSRRDWENPQITQYHRLEAHPPFHS 43
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 39.9 bits (89), Expect = 0.079
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 168 LAVVLQRRDWENPGVTQLNRLAAHPP 245
LA +L R DW+NP +T +NRL +H P
Sbjct: 18 LATILARNDWQNPAITSVNRLPSHTP 43
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 39.9 bits (89), Expect = 0.079
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +3
Query: 177 VLQRRDWENPGVTQLNRLAAHPPFAS 254
VL R DW N +T LNRL AHP FAS
Sbjct: 17 VLAREDWHNQTITHLNRLPAHPVFAS 42
>UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp.
SS|Rep: LacZ alpha peptide - Beggiatoa sp. SS
Length = 73
Score = 37.9 bits (84), Expect = 0.32
Identities = 20/34 (58%), Positives = 20/34 (58%)
Frame = -2
Query: 667 FLATFAGFPRQALNRGSX*GSDLVLYGTXTPKNL 566
FLATFAGFPRQALNRG G PK L
Sbjct: 39 FLATFAGFPRQALNRGLPLGFRFSALRHLDPKKL 72
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 35.9 bits (79), Expect = 1.3
Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 55 NIQAAFLARFEHSNLFKVKLS-GGARYPIRPIVSRIT 162
NI R E + ++ + GGARYPIRPIVSRIT
Sbjct: 239 NILDKLYVRNEFNQAYRYRRPRGGARYPIRPIVSRIT 275
>UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus
lactis|Rep: Beta-galactosidase - Lactococcus lactis
subsp. lactis (Streptococcus lactis)
Length = 998
Score = 35.9 bits (79), Expect = 1.3
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 177 VLQRRDWENPGVTQLNRLAAHPP 245
VL+R+DWENP V+ NRL H P
Sbjct: 9 VLERKDWENPVVSNWNRLPMHTP 31
>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
Gammaproteobacteria|Rep: Beta-galactosidase -
Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis)
Length = 1039
Score = 35.1 bits (77), Expect = 2.3
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 177 VLQRRDWENPGVTQLNRLAAHPP 245
++ RRDWENP Q+N++ AH P
Sbjct: 7 IINRRDWENPITVQVNQVKAHSP 29
>UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09076 protein - Schistosoma
japonicum (Blood fluke)
Length = 109
Score = 34.3 bits (75), Expect = 4.0
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +3
Query: 171 AVVLQRRDWENPGVTQLNRLAAHPPFASGVIAKRPAP 281
A L+RR+ +NPG QLN L A P F G K+ P
Sbjct: 57 AAFLKRREGKNPGCPQLNPLEALPLFPGGEKTKKAPP 93
>UniRef50_A0D095 Cluster: Chromosome undetermined scaffold_33, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_33,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1173
Score = 34.3 bits (75), Expect = 4.0
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 438 VYSFDL*GILPISAYWLKNELI*QKFNANFNKILTLTICHSPFR 307
+++F L G L +WLKN+ KF++ F ++L L + + FR
Sbjct: 665 IFNFSLQGALSYIDFWLKNQHFDDKFSSTFTQLLLLALGVTVFR 708
>UniRef50_A1V9J8 Cluster: Two component, sigma54 specific,
transcriptional regulator, Fis family; n=3;
Proteobacteria|Rep: Two component, sigma54 specific,
transcriptional regulator, Fis family - Desulfovibrio
vulgaris subsp. vulgaris (strain DP4)
Length = 451
Score = 33.5 bits (73), Expect = 6.9
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -2
Query: 607 SDLVLYGTXTPKNLIRVMVHVVGHRPDRRFFALDVG 500
S L+L T T K L MVH+ R DRRF A++ G
Sbjct: 166 SVLILGETGTGKELAARMVHLFSRRSDRRFLAINCG 201
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 761,780,598
Number of Sequences: 1657284
Number of extensions: 15084586
Number of successful extensions: 32199
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 31366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32195
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75013275813
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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