Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0105
         (655 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9EN34 Cluster: AMV012; n=1; Amsacta moorei entomopoxvi...    33   6.0  
UniRef50_A2TY54 Cluster: Putative uncharacterized protein; n=1; ...    33   7.9  

>UniRef50_Q9EN34 Cluster: AMV012; n=1; Amsacta moorei entomopoxvirus
           'L'|Rep: AMV012 - Amsacta moorei entomopoxvirus (AmEPV)
          Length = 86

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 19/66 (28%), Positives = 36/66 (54%)
 Frame = +1

Query: 256 SRIFLNKIVIFYCINPVLFFSTVTKRFFTLANLCMIMFRVHRK*LLKPVAYVILLLFFRY 435
           S+++ NK    Y I  ++FF  +   +F    L  I+F ++ +  +K + YVIL   + Y
Sbjct: 4   SQLYTNKSFNSYII--LIFFFNILILYFLEYILFFILFMIYLEYFIKYLLYVILSFIYIY 61

Query: 436 PLLIFI 453
            LL+++
Sbjct: 62  CLLLYL 67


>UniRef50_A2TY54 Cluster: Putative uncharacterized protein; n=1;
           Polaribacter dokdonensis MED152|Rep: Putative
           uncharacterized protein - Polaribacter dokdonensis
           MED152
          Length = 152

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = -2

Query: 621 CPESGVWNFIPIXQSNPQ*QCDPAAIQIRGGMNELMWLYNDISINTFYIRXMLKDSNKD 445
           C E   W F+P   +      DP  I+   G  E +++  +  +NT Y   +LK  N +
Sbjct: 58  CLEGSTWKFVPNNNTGTYTISDPNCIE---GEREFVFVIQETDVNTGYYDFLLKPKNNE 113


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,956,601
Number of Sequences: 1657284
Number of extensions: 11880000
Number of successful extensions: 19678
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19665
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)