Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0098
(671 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000519DEA Cluster: PREDICTED: similar to CG2330-PA;... 141 2e-32
UniRef50_UPI00015B4D4B Cluster: PREDICTED: similar to ENSANGP000... 137 3e-31
UniRef50_Q9VI25 Cluster: CG2330-PA; n=4; Diptera|Rep: CG2330-PA ... 111 2e-23
UniRef50_UPI0000E495E0 Cluster: PREDICTED: similar to neurochond... 39 2e-05
UniRef50_Q9Y4D9 Cluster: Neurochondrin; n=23; Mammalia|Rep: Neur... 49 9e-05
UniRef50_UPI000065E472 Cluster: neurochondrin isoform 2; n=2; Cl... 47 4e-04
UniRef50_Q4T380 Cluster: Chromosome 21 SCAF10109, whole genome s... 45 0.001
UniRef50_A7S6S1 Cluster: Predicted protein; n=1; Nematostella ve... 44 0.004
UniRef50_Q640K1 Cluster: LOC494655 protein; n=5; Tetrapoda|Rep: ... 42 0.014
UniRef50_Q9ZD47 Cluster: ADP,ATP carrier protein 4; n=13; Ricket... 36 0.67
UniRef50_Q9SBX4 Cluster: Proline-rich protein precursor; n=23; P... 35 2.1
UniRef50_Q6M929 Cluster: Related to serine/threonine-specific pr... 35 2.1
UniRef50_Q5M2A5 Cluster: Putative uncharacterized protein; n=1; ... 34 2.7
UniRef50_UPI00006CCC06 Cluster: hypothetical protein TTHERM_0044... 34 3.6
UniRef50_Q8IS76 Cluster: Putative uncharacterized protein; n=1; ... 34 3.6
UniRef50_UPI00006CD1F0 Cluster: hypothetical protein TTHERM_0012... 33 4.8
UniRef50_Q0EWL8 Cluster: Aminoglycoside phosphotransferase; n=1;... 33 4.8
UniRef50_Q6FST5 Cluster: ATP-dependent RNA helicase DBP6; n=2; S... 33 4.8
UniRef50_A2DY03 Cluster: Putative uncharacterized protein; n=1; ... 33 8.3
>UniRef50_UPI0000519DEA Cluster: PREDICTED: similar to CG2330-PA; n=3;
Endopterygota|Rep: PREDICTED: similar to CG2330-PA - Apis
mellifera
Length = 745
Score = 141 bits (341), Expect = 2e-32
Identities = 88/232 (37%), Positives = 130/232 (56%), Gaps = 10/232 (4%)
Frame = +1
Query: 1 ETTAMREQIYALLPFMFSLANDSFHAYRSRKLAEKNKSEGEPLDDNSGLMGQ-------- 156
ETTAMR Q+Y +LP++ ++AND+F+AYR+RKL EK K+ + D + G+
Sbjct: 394 ETTAMRSQVYTVLPYVLTIANDTFYAYRNRKLTEKAKANAKLKSDEATSSGESVIHDPLS 453
Query: 157 -IDLLRLMLPALCHLAVEDKARDIMFNLKQEDIFMK-L*ISTGLLCIIRNLLFLSQKEAK 330
IDLLRL+LPALC+LAVE+ AR I+ KQE++ + L ++ + + S++
Sbjct: 454 EIDLLRLLLPALCYLAVEEDARKILIQHKQEEVLFECLSYHWTIVHQKKPPIPKSERLKI 513
Query: 331 LGLNQSQNWIPKLLEDMKDSRAAMVSLCNIFMNLTVLAPKIVDNSMLFNTLLKFIFNNLQ 510
L + ++ L E++KDSR AMVS+CN+ MN+TVL K+V+ S F +LLKFIFNNL
Sbjct: 514 LKEPEKEDLELHLSEEIKDSRTAMVSVCNVLMNITVLEAKLVEESPTFISLLKFIFNNLP 573
Query: 511 N*RTSLKILSYMDTWQYWDYFCSNNKQTK*KRMDFQFVDIFNQLSGFLGDAY 666
+ + L + + K+ DF FL DAY
Sbjct: 574 ELKQIPENLVLHGHLAVLGLLLLKQQAIRIKKNDFSICRYIQATIRFLWDAY 625
>UniRef50_UPI00015B4D4B Cluster: PREDICTED: similar to
ENSANGP00000031374; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000031374 - Nasonia
vitripennis
Length = 748
Score = 137 bits (331), Expect = 3e-31
Identities = 84/230 (36%), Positives = 124/230 (53%), Gaps = 8/230 (3%)
Frame = +1
Query: 1 ETTAMREQIYALLPFMFSLANDSFHAYRSRKLAEKNKSEGEPLDDNSGL--------MGQ 156
ET+AMR Q++ALLP++ ++AND+F+A+R++KLAEK K G D+ S +
Sbjct: 400 ETSAMRTQVHALLPYILTVANDTFYAHRNKKLAEKAKL-GAKADEGSSSAEPVKHDPLSD 458
Query: 157 IDLLRLMLPALCHLAVEDKARDIMFNLKQEDIFMKL*ISTGLLCIIRNLLFLSQKEAKLG 336
ID+LRL+LPALCHLAVE+ AR I+ KQ+++ + + + K
Sbjct: 459 IDVLRLLLPALCHLAVEEDARKILLKHKQDEVLFECLSYHWTIVHYKKPPVPKADRLKAL 518
Query: 337 LNQSQNWIPKLLEDMKDSRAAMVSLCNIFMNLTVLAPKIVDNSMLFNTLLKFIFNNLQN* 516
++ P +LE+M DSR AMVS+CN+ MN+TVL K+V+ S F LLKFIF++L
Sbjct: 519 KEPAKELEPHVLEEMADSRTAMVSICNVLMNITVLEAKLVEESPTFINLLKFIFDSLPEL 578
Query: 517 RTSLKILSYMDTWQYWDYFCSNNKQTK*KRMDFQFVDIFNQLSGFLGDAY 666
+ + L + + K+ DF FL DAY
Sbjct: 579 KQIPENLVLHGNLAVLGLLLLKQQAKRIKKNDFSICRYIQATIRFLWDAY 628
>UniRef50_Q9VI25 Cluster: CG2330-PA; n=4; Diptera|Rep: CG2330-PA -
Drosophila melanogaster (Fruit fly)
Length = 723
Score = 111 bits (266), Expect = 2e-23
Identities = 76/224 (33%), Positives = 114/224 (50%), Gaps = 1/224 (0%)
Frame = +1
Query: 1 ETTAMREQIYALLPFMFSLANDSFHAYRSRKLAEKNKSEGEPLDDNSGLMGQIDLLRLML 180
ETTAMR IY LLPFM +AN+SF ++ + + EGEP ID+LR+ML
Sbjct: 394 ETTAMRPAIYKLLPFMLKVANESFQELKTWRAGTR---EGEP---------PIDVLRIML 441
Query: 181 PALCHLAVEDKARDIMFNLKQEDIFMK-L*ISTGLLCIIRNLLFLSQKEAKLGLNQSQNW 357
PALCH AVE++AR ++F KQ+++ ++ L + R + +++ ++
Sbjct: 442 PALCHFAVEEEARRVLFTHKQDEVLLESLEFYFSIAHWKRPPIPRAERLKRMN-EPDPVP 500
Query: 358 IPKLLEDMKDSRAAMVSLCNIFMNLTVLAPKIVDNSMLFNTLLKFIFNNLQN*RTSLKIL 537
P+ +MK +R+A+V+LCNI MN TVL PK ++ F LLKF+ NL + + L
Sbjct: 501 TPEQQAEMKVARSAIVALCNILMNFTVLEPKKAEDGPTFANLLKFVVENLPELKDTPDNL 560
Query: 538 SYMDTWQYWDYFCSNNKQTK*KRMDFQFVDIFNQLSGFLGDAYH 669
+ K K+ DF FL DAY+
Sbjct: 561 VIHGNLAVLGLLLLKQQSKKVKQNDFSICRYIQATIRFLWDAYN 604
Score = 72.5 bits (170), Expect = 8e-12
Identities = 43/135 (31%), Positives = 64/135 (47%)
Frame = +3
Query: 252 LYEAMNFHWSIVHYKKPPIPKSERGKARTQPEPELDPQVIGRYEGFKSCHG*PVQHFHEP 431
L E++ F++SI H+K+PPIP++ER K +P+P P+ + +S
Sbjct: 466 LLESLEFYFSIAHWKRPPIPRAERLKRMNEPDPVPTPEQQAEMKVARSAIVALCNILMNF 525
Query: 432 DSVGT*NC*Q*HAV*HSTQIHFQQFTELKDIPENXXXXXXXXXXXXXXFKQQANKVKKNG 611
+ + + + ELKD P+N KQQ+ KVK+N
Sbjct: 526 TVLEPKKAEDGPTFANLLKFVVENLPELKDTPDNLVIHGNLAVLGLLLLKQQSKKVKQND 585
Query: 612 FSICRYIQSTIRVPW 656
FSICRYIQ+TIR W
Sbjct: 586 FSICRYIQATIRFLW 600
>UniRef50_UPI0000E495E0 Cluster: PREDICTED: similar to
neurochondrin; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to neurochondrin - Strongylocentrotus
purpuratus
Length = 758
Score = 39.1 bits (87), Expect(2) = 2e-05
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +1
Query: 160 DLLRLMLPALCHLAVEDKARDIMFNLKQEDIFMK 261
DLLRL+LPALCHL ED+ R I+ K ++ ++
Sbjct: 497 DLLRLLLPALCHLTAEDEPRKILRENKGLELLLE 530
Score = 31.9 bits (69), Expect(2) = 2e-05
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Frame = +1
Query: 382 KDSRAAMVSLCNIFMNLTVLAPKIVDNSMLFNTLLKFIFNNLQ---N*RTSLKILSYMDT 552
K+S A+VSL +IF+N+++ +V +F LL I +N+Q R L +L++ +T
Sbjct: 545 KESEEALVSLSSIFLNMSLQDQDVVKTHPVFTELLGLI-SNVQPQATARKDLVVLTFYET 603
>UniRef50_Q9Y4D9 Cluster: Neurochondrin; n=23; Mammalia|Rep:
Neurochondrin - Homo sapiens (Human)
Length = 731
Score = 49.2 bits (112), Expect = 9e-05
Identities = 44/169 (26%), Positives = 73/169 (43%)
Frame = +1
Query: 1 ETTAMREQIYALLPFMFSLANDSFHAYRSRKLAEKNKSEGEPLDDNSGLMGQIDLLRLML 180
ET+++R+++ LLPF+ A + + + G D LRL+L
Sbjct: 408 ETSSLRKEVCQLLPFLVRYAKTLYEEAEEANDLSQQVANLAISPTTPGPTWPGDALRLLL 467
Query: 181 PALCHLAVEDKARDIMFNLKQEDIFMKL*ISTGLLCIIRNLLFLSQKEAKLGLNQSQNWI 360
P CHL VED R+I+ +K+ + LLC FL Q E + +
Sbjct: 468 PGWCHLTVEDGPREIL--IKEG--------APSLLC----KYFLQQWEL-TSPGHDTSVL 512
Query: 361 PKLLEDMKDSRAAMVSLCNIFMNLTVLAPKIVDNSMLFNTLLKFIFNNL 507
P +E + + C+IF+NL V AP ++ F +L+ + +L
Sbjct: 513 PDSVE------IGLQTCCHIFLNLVVTAPGLIKRDACFTSLMNTLMTSL 555
>UniRef50_UPI000065E472 Cluster: neurochondrin isoform 2; n=2;
Clupeocephala|Rep: neurochondrin isoform 2 - Takifugu
rubripes
Length = 679
Score = 47.2 bits (107), Expect = 4e-04
Identities = 23/86 (26%), Positives = 42/86 (48%)
Frame = +1
Query: 1 ETTAMREQIYALLPFMFSLANDSFHAYRSRKLAEKNKSEGEPLDDNSGLMGQIDLLRLML 180
ET+ ++E++ LLPF+ + RS + + + G + D LR +L
Sbjct: 422 ETSCLKEEVIRLLPFLIGYSRSHLQGERSEQ-GVSDWMSSMSVSGERGAWTRKDALRYLL 480
Query: 181 PALCHLAVEDKARDIMFNLKQEDIFM 258
PALCHL+ E+ R ++ L + + +
Sbjct: 481 PALCHLSAEEGPRKVLLTLDTQALLV 506
>UniRef50_Q4T380 Cluster: Chromosome 21 SCAF10109, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 21 SCAF10109, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 552
Score = 45.2 bits (102), Expect = 0.001
Identities = 25/86 (29%), Positives = 42/86 (48%)
Frame = +1
Query: 1 ETTAMREQIYALLPFMFSLANDSFHAYRSRKLAEKNKSEGEPLDDNSGLMGQIDLLRLML 180
ET+++R+Q+ LLPF+ + A S + S ++ G D LR +L
Sbjct: 358 ETSSLRDQVTPLLPFLIGYSRSHMQAGGSEQDVRGWMSTVSVSGESGAWTGD-DALRYLL 416
Query: 181 PALCHLAVEDKARDIMFNLKQEDIFM 258
PALCHL+ E+ R + L + + +
Sbjct: 417 PALCHLSAEEGPRKALLGLDAQGLLV 442
>UniRef50_A7S6S1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 646
Score = 43.6 bits (98), Expect = 0.004
Identities = 23/80 (28%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Frame = +1
Query: 1 ETTAMREQIYALLPFMFSLANDSFH----AYRSRKLAEKNKSEGEPLDDNSGLMGQIDLL 168
E+ A+++++ +LP + L+ ++ + + + + K+ S P N ++++L
Sbjct: 397 ESVALQDKVLKVLPILIKLSEETMDLDSPSPQQHQKSAKSVSFNLPEPLNQPAR-KVEIL 455
Query: 169 RLMLPALCHLAVEDKARDIM 228
R +LPALCHL+ EDK+R I+
Sbjct: 456 RFLLPALCHLSAEDKSRHIL 475
>UniRef50_Q640K1 Cluster: LOC494655 protein; n=5; Tetrapoda|Rep:
LOC494655 protein - Xenopus laevis (African clawed frog)
Length = 720
Score = 41.9 bits (94), Expect = 0.014
Identities = 39/169 (23%), Positives = 73/169 (43%)
Frame = +1
Query: 1 ETTAMREQIYALLPFMFSLANDSFHAYRSRKLAEKNKSEGEPLDDNSGLMGQIDLLRLML 180
ET ++ ++ LLPF+ K S+ L ++ G + D +R +L
Sbjct: 397 ETACLKLEVIQLLPFLVHYMRTCHQRSVICSKLPKEVSQVALLSNSWGNIWPGDAIRFLL 456
Query: 181 PALCHLAVEDKARDIMFNLKQEDIFMKL*ISTGLLCIIRNLLFLSQKEAKLGLNQSQNWI 360
PALCHL+ E+ R ++ IS G+ ++ + F Q + ++
Sbjct: 457 PALCHLSAEEVPRKVL-------------ISEGVPALLCD-YFQLQWDVLFAEDE----- 497
Query: 361 PKLLEDMKDSRAAMVSLCNIFMNLTVLAPKIVDNSMLFNTLLKFIFNNL 507
P+ L+ + ++ + C +F+NL V P V F +L+K + +L
Sbjct: 498 PEGLQSA--AELSLQTCCGVFLNLVVTEPTFVGQESCFVSLMKLLMQSL 544
>UniRef50_Q9ZD47 Cluster: ADP,ATP carrier protein 4; n=13;
Rickettsieae|Rep: ADP,ATP carrier protein 4 - Rickettsia
prowazekii
Length = 512
Score = 36.3 bits (80), Expect = 0.67
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -1
Query: 533 IFRDVLQFCKLLKMNLSRVLNSMLLSTILGANTVRFMK 420
+F +L FC L NL R L +++T++GA T+ F+K
Sbjct: 38 LFITLLMFCILFIQNLIRALKDSIVTTMIGAETISFLK 75
>UniRef50_Q9SBX4 Cluster: Proline-rich protein precursor; n=23;
Poaceae|Rep: Proline-rich protein precursor - Zea mays
(Maize)
Length = 481
Score = 34.7 bits (76), Expect = 2.1
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +3
Query: 249 HLYEAMNFHWSIVHYKKPPIPKSERGKARTQPEPELDPQVIGRYEGFKSCHG*PVQHFHE 428
H ++ ++H H+ K P+P K + +PEP+ PQ Y+ +G P +H
Sbjct: 351 HFHKDHDYHHFFDHFHKKPVPP----KPKPEPEPKPKPQPKPEYKPPMPTYGSPTPIYHP 406
Query: 429 P 431
P
Sbjct: 407 P 407
Score = 34.3 bits (75), Expect = 2.7
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +3
Query: 249 HLYEAMNFHWSIVHYKKPPIPKSERGKARTQPEPELDPQVIGRYEGFKSCHG*PVQHFHE 428
H ++ ++H H+ K P+P K + +P+PE PQ Y +G P +H
Sbjct: 422 HFHKDHDYHHFFDHFHKKPVPP----KPKPEPKPEPKPQPEPEYHPPTPTYGSPTPIYHP 477
Query: 429 P 431
P
Sbjct: 478 P 478
Score = 33.9 bits (74), Expect = 3.6
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +3
Query: 249 HLYEAMNFHWSIVHYKKPPIPKSERGKARTQPEPELDP 362
H ++ ++H + H+ K P+P+ + + + QP+PE P
Sbjct: 285 HFHKDHDYHHFLDHFHKKPVPQKPKLEPKPQPKPEYHP 322
>UniRef50_Q6M929 Cluster: Related to serine/threonine-specific
protein kinase KIN1; n=3; Sordariaceae|Rep: Related to
serine/threonine-specific protein kinase KIN1 -
Neurospora crassa
Length = 880
Score = 34.7 bits (76), Expect = 2.1
Identities = 20/53 (37%), Positives = 25/53 (47%)
Frame = +3
Query: 234 PKTGRHLYEAMNFHWSIVHYKKPPIPKSERGKARTQPEPELDPQVIGRYEGFK 392
PK + E MN W + Y PP R + T P LDP+VI + GFK
Sbjct: 413 PKQRATMQEVMNHPWMLKGYNGPPDNYLPRREPLTLP---LDPEVISQMTGFK 462
>UniRef50_Q5M2A5 Cluster: Putative uncharacterized protein; n=1;
Streptococcus thermophilus LMG 18311|Rep: Putative
uncharacterized protein - Streptococcus thermophilus
(strain ATCC BAA-250 / LMG 18311)
Length = 401
Score = 34.3 bits (75), Expect = 2.7
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 481 LLKFIFNNLQN*RT-SLKILSYMDTWQYWDYFCSNN 585
LLKF FNNL+ +T S + TW+ +DYF SNN
Sbjct: 84 LLKFNFNNLKLIKTGSSSGQIHSSTWEVFDYFISNN 119
>UniRef50_UPI00006CCC06 Cluster: hypothetical protein
TTHERM_00440650; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00440650 - Tetrahymena
thermophila SB210
Length = 619
Score = 33.9 bits (74), Expect = 3.6
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +1
Query: 475 NTLLKFIFNNLQN*RTSLKILSYMDTWQYWDYFCSNNKQTK*KRMDFQFVDIFNQLSG 648
NT F ++N R +KI Y D+++ DY NN+Q + +D++F D+ SG
Sbjct: 533 NTTKYLNFRGMKNFRAEIKIY-YNDSYKIMDYIAYNNEQKECIIVDWKFSDLEKLKSG 589
>UniRef50_Q8IS76 Cluster: Putative uncharacterized protein; n=1;
Euprymna scolopes|Rep: Putative uncharacterized protein
- Euprymna scolopes
Length = 102
Score = 33.9 bits (74), Expect = 3.6
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Frame = -2
Query: 583 CLN--KSNPSTAKCPCKTRFSGMSFNSVNC*K 494
CLN K +P+T KC C RFSG + +++C K
Sbjct: 34 CLNNGKIHPNTCKCECLARFSGENCETLDCDK 65
>UniRef50_UPI00006CD1F0 Cluster: hypothetical protein
TTHERM_00129990; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00129990 - Tetrahymena
thermophila SB210
Length = 554
Score = 33.5 bits (73), Expect = 4.8
Identities = 26/63 (41%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 457 DNSMLFNTLLKFIFNNLQN*RTSLKILSY-MDTWQYWDYFCSNNKQTK*KRMDFQFVDIF 633
D ML NT F+ N +N SLK + +D WQY F S Q K M F FVD F
Sbjct: 413 DQRMLINT---FLDNLYKNHNKSLKQFHFNIDDWQYLQSFKSEYAQ---KLMKFDFVDDF 466
Query: 634 NQL 642
L
Sbjct: 467 QLL 469
>UniRef50_Q0EWL8 Cluster: Aminoglycoside phosphotransferase; n=1;
Mariprofundus ferrooxydans PV-1|Rep: Aminoglycoside
phosphotransferase - Mariprofundus ferrooxydans PV-1
Length = 357
Score = 33.5 bits (73), Expect = 4.8
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Frame = +1
Query: 196 LAVEDKARDIMFNLKQEDIFMKL*ISTGLLCIIRNLLFLSQKEA--KLGLNQSQNWIPKL 369
+AV D D F L E + + STGLLC L S + ++GL + + + K
Sbjct: 27 IAVMDNGTDSFFALGPEQVIQAI-ESTGLLCNGFQLALNSYENRVYQIGLEDAPSVVAKF 85
Query: 370 LEDMKDSRAAMV-----SLCNIFMNLTVLAPKIVDNSMLFN 477
+ S AA++ +L M++ V+AP ++D + L++
Sbjct: 86 YRPNRWSDAAIIEEHDFTLELADMDIPVIAPMVIDGATLYH 126
>UniRef50_Q6FST5 Cluster: ATP-dependent RNA helicase DBP6; n=2;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP6 -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 651
Score = 33.5 bits (73), Expect = 4.8
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 292 IRNLLFLSQKEAKLGLNQS-QNWIPKLLEDMKDSR 393
+RNL FL EA LNQS QNWIP+++ K +
Sbjct: 351 LRNLKFLVLDEADRLLNQSFQNWIPEVMSKFKSDK 385
>UniRef50_A2DY03 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 2024
Score = 32.7 bits (71), Expect = 8.3
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 415 NIFMNLTVLAPKIVDNSMLFNTLLKFIFN 501
N+ +NL L+P IVDN + N ++KFI N
Sbjct: 572 NLMINLLRLSPMIVDNFSILNHVIKFICN 600
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,170,944
Number of Sequences: 1657284
Number of extensions: 12731283
Number of successful extensions: 31715
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 30504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31686
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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