Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0049
(691 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7RM38 Cluster: Predicted protein; n=2; Nematostella ve... 106 4e-22
UniRef50_Q9VPH2 Cluster: DNA primase large subunit; n=4; Diptera... 94 3e-18
UniRef50_P49643 Cluster: DNA primase large subunit; n=33; Eutele... 91 3e-17
UniRef50_UPI0000E479D7 Cluster: PREDICTED: similar to LOC496363 ... 89 1e-16
UniRef50_UPI0000E4784D Cluster: PREDICTED: hypothetical protein;... 83 8e-15
UniRef50_A7NXV1 Cluster: Chromosome chr5 scaffold_2, whole genom... 75 2e-12
UniRef50_O02334 Cluster: DNA primase large subunit; n=2; Caenorh... 75 2e-12
UniRef50_Q84WJ2 Cluster: Probable DNA primase large subunit; n=3... 74 4e-12
UniRef50_UPI00015B41BD Cluster: PREDICTED: similar to GM13640p; ... 73 9e-12
UniRef50_UPI000051A375 Cluster: PREDICTED: similar to DNAprim CG... 66 6e-10
UniRef50_A6R582 Cluster: DNA primase large subunit; n=5; Eurotio... 62 9e-09
UniRef50_UPI0000D570E8 Cluster: PREDICTED: similar to CG5553-PA;... 62 2e-08
UniRef50_P20457 Cluster: DNA primase large subunit; n=10; Saccha... 57 4e-07
UniRef50_A7TLL5 Cluster: Putative uncharacterized protein; n=1; ... 54 3e-06
UniRef50_O74761 Cluster: DNA primase large subunit; n=2; Schizos... 52 2e-05
UniRef50_Q8NIZ4 Cluster: Probable DNA primase large subunit; n=1... 51 2e-05
UniRef50_A4S4I3 Cluster: Predicted protein; n=1; Ostreococcus lu... 51 3e-05
UniRef50_Q00Z54 Cluster: Eukaryotic-type DNA primase, large subu... 49 1e-04
UniRef50_Q4MZT6 Cluster: DNA primase large subunit, putative; n=... 49 1e-04
UniRef50_A5K6H8 Cluster: DNA primase, large subunit, putative; n... 48 3e-04
UniRef50_Q6C2W5 Cluster: Yarrowia lipolytica chromosome F of str... 46 7e-04
UniRef50_Q5KAH0 Cluster: Putative uncharacterized protein; n=1; ... 46 9e-04
UniRef50_UPI0000D56ED4 Cluster: PREDICTED: similar to CG5553-PA;... 44 0.003
UniRef50_A7AVK1 Cluster: DNA primase, large subunit; n=1; Babesi... 44 0.003
UniRef50_Q6CL91 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 44 0.004
UniRef50_A2G4G7 Cluster: Eukaryotic-type DNA primase, large subu... 43 0.006
UniRef50_Q4P7R1 Cluster: Putative uncharacterized protein; n=1; ... 43 0.006
UniRef50_UPI00006CBF5C Cluster: hypothetical protein TTHERM_0031... 38 0.23
UniRef50_Q246C7 Cluster: Eukaryotic-type DNA primase, large subu... 37 0.40
UniRef50_O42263 Cluster: Kinesin-related protein; n=2; Xenopus|R... 36 0.71
UniRef50_Q8IHP8 Cluster: Putative uncharacterized protein; n=2; ... 36 1.2
UniRef50_Q8I348 Cluster: Selenophosphate synthetase, putative; n... 36 1.2
UniRef50_A2D807 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6
UniRef50_Q55BM5 Cluster: DNA polymerase alpha primase subunit; n... 34 3.8
UniRef50_Q6C0Y6 Cluster: Yarrowia lipolytica chromosome F of str... 33 5.0
UniRef50_A3J2V7 Cluster: Putative uncharacterized protein; n=1; ... 33 6.6
UniRef50_A0BQS3 Cluster: Chromosome undetermined scaffold_121, w... 33 6.6
UniRef50_Q7RN33 Cluster: Putative uncharacterized protein PY0199... 33 8.7
>UniRef50_A7RM38 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 517
Score = 106 bits (255), Expect = 4e-22
Identities = 58/140 (41%), Positives = 80/140 (57%), Gaps = 4/140 (2%)
Frame = +1
Query: 256 GYAYIPHRDFISVLAAQYRTHLKQNLAKACHHLCEIEQDERLVCLLKGLHQSYSGNDYSE 435
G AYIPH+ +S++ +RT L LA L +E+D+RL+ L L + Y G DYS+
Sbjct: 218 GSAYIPHQSLVSIITNVFRTQLSHALAVTARALPYLEEDDRLLPRLSNLSRQYLGQDYSQ 277
Query: 436 TKAV----IPIESLDSISTKSFPLCMRQLMNN*ELPIT*NMGAGYSMGLFLKGIGVTLED 603
K + I ++ +D++S KSFPLCMRQL N G GLFLKGIG+TLE+
Sbjct: 278 KKNIAGGKITLDQIDAVSQKSFPLCMRQLHQNLRENHHLKHGGRMQYGLFLKGIGLTLEE 337
Query: 604 S*GFGGKNSLRLWIWDKFEK 663
S F +R+ DKF+K
Sbjct: 338 SLAFWRTEFIRIMDLDKFDK 357
Score = 62.5 bits (145), Expect = 9e-09
Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Frame = +2
Query: 11 FIARELELFKMRFAVMR-GERLEVFFKLNNLCYTTISEDEKNEVIQNLIESTPYSKIDNM 187
F+ +E ELF+ RF G+ +E F + N+L YT I E+EK ++ L +S Y+ D
Sbjct: 132 FLLQESELFRFRFVTEEEGKGVEEFLQHNSLSYTPIGEEEKTTFLEKLRDSG-YNLTDAA 190
Query: 188 ----KFYKVKFFEVLDLVKARKVFL 250
K+YKV F E LDLV++RKVFL
Sbjct: 191 VLASKYYKVHFTEALDLVRSRKVFL 215
Score = 62.1 bits (144), Expect = 1e-08
Identities = 28/46 (60%), Positives = 31/46 (67%)
Frame = +3
Query: 510 HEQLRIAHHLKHGGRLQYGLVLKRYWCDTGRLLRFWREEFIKIMDL 647
H+ LR HHLKHGGR+QYGL LK L FWR EFI+IMDL
Sbjct: 307 HQNLRENHHLKHGGRMQYGLFLKGIGLTLEESLAFWRTEFIRIMDL 352
>UniRef50_Q9VPH2 Cluster: DNA primase large subunit; n=4;
Diptera|Rep: DNA primase large subunit - Drosophila
melanogaster (Fruit fly)
Length = 533
Score = 94.3 bits (224), Expect = 3e-18
Identities = 53/137 (38%), Positives = 74/137 (54%), Gaps = 1/137 (0%)
Frame = +1
Query: 256 GYAYIPHRDFISVLAAQYRTHLKQNLAKACHHLCEIEQDERLVCLLKGLHQSYSGNDYSE 435
GYAY+ D +S++ + + ++Q L A + ++E DER+ LK LH SY+G DY+
Sbjct: 217 GYAYVNTHDLVSLVGTKQQDEIEQGLQAAKTMVEDVEADERISRTLKALHNSYTGRDYTV 276
Query: 436 TK-AVIPIESLDSISTKSFPLCMRQLMNN*ELPIT*NMGAGYSMGLFLKGIGVTLEDS*G 612
+ A +PIESLD +S S PLCMR + GLFLKGIGV LEDS
Sbjct: 277 CRDAAVPIESLDQLSKTSMPLCMRMCHEHIRANHHIKHSGRMQYGLFLKGIGVALEDSLR 336
Query: 613 FGGKNSLRLWIWDKFEK 663
F + + DKF +
Sbjct: 337 FWREEFTKKMDADKFTR 353
Score = 65.3 bits (152), Expect = 1e-09
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Frame = +2
Query: 11 FIARELELFKMRFAVMRGERLEVFFKLNNLCYTTISEDEKNEVIQNLIEST---PYSKID 181
F+ARE+ELF+ +FA + ++ F + N ++E +K+EV L EST +KI+
Sbjct: 132 FVAREMELFRYKFAALSSFEVKQFLEANGFEIHPLTEAQKDEVKDGLYESTVGQSVAKIE 191
Query: 182 NMKFYKVKFFEVLDLVKARKVFL 250
+ FYKV F +VLDLV+ R+ FL
Sbjct: 192 LLDFYKVPFTQVLDLVRGRRCFL 214
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/45 (57%), Positives = 29/45 (64%)
Frame = +3
Query: 510 HEQLRIAHHLKHGGRLQYGLVLKRYWCDTGRLLRFWREEFIKIMD 644
HE +R HH+KH GR+QYGL LK LRFWREEF K MD
Sbjct: 303 HEHIRANHHIKHSGRMQYGLFLKGIGVALEDSLRFWREEFTKKMD 347
>UniRef50_P49643 Cluster: DNA primase large subunit; n=33;
Euteleostomi|Rep: DNA primase large subunit - Homo
sapiens (Human)
Length = 509
Score = 90.6 bits (215), Expect = 3e-17
Identities = 54/139 (38%), Positives = 77/139 (55%), Gaps = 3/139 (2%)
Frame = +1
Query: 256 GYAYIPHRDFISVLAAQYRTHLKQNLAKACHHLCEIEQDERLVCLLKGLHQSYSGNDYSE 435
G+AY+P +D ++++ ++R L + LA L ++ DERL LL L SY+G DYS
Sbjct: 205 GFAYVPLKDIVAIILNEFRAKLSKALALTARSLPAVQSDERLQPLLNHLSHSYTGQDYST 264
Query: 436 TKAV--IPIESLDSISTKSFPLCMRQLMNN*ELPIT*NMGAGYSMGLFLKGIGVTLEDS* 609
V I ++ +D +STKSFP CMRQL G GLFLKGIG+TLE +
Sbjct: 265 QGNVGKISLDQIDLLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGLTLEQAL 324
Query: 610 GFGGKNSLR-LWIWDKFEK 663
F + ++ DKF+K
Sbjct: 325 QFWKQEFIKGKMDPDKFDK 343
Score = 55.2 bits (127), Expect = 1e-06
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = +3
Query: 510 HEQLRIAHHLKHGGRLQYGLVLKRYWCDTGRLLRFWREEFIK 635
H+ LR HHL+HGGR+QYGL LK + L+FW++EFIK
Sbjct: 292 HKALRENHHLRHGGRMQYGLFLKGIGLTLEQALQFWKQEFIK 333
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/83 (32%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Frame = +2
Query: 11 FIARELELFKMRFAVMRGERLEVFFKLNNLCYTTISEDEKNEVIQNLIESTPY---SKID 181
FI +E++L + RF+++ ++++ F K + L + IS++EK Q ++ S+P K+
Sbjct: 120 FIQQEMDLLRFRFSILPKDKIQDFLKDSQLQFEAISDEEKTLREQEIVASSPSLSGLKLG 179
Query: 182 NMKFYKVKFFEVLDLVKARKVFL 250
YK+ F + LDL + RKV+L
Sbjct: 180 FESIYKIPFADALDLFRGRKVYL 202
>UniRef50_UPI0000E479D7 Cluster: PREDICTED: similar to LOC496363
protein; n=3; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to LOC496363 protein -
Strongylocentrotus purpuratus
Length = 401
Score = 88.6 bits (210), Expect = 1e-16
Identities = 51/139 (36%), Positives = 74/139 (53%), Gaps = 6/139 (4%)
Frame = +1
Query: 256 GYAYIPHRDFISVLAAQYRTHLKQNLAKACHHLCEIEQDERLV--CLLKGLHQSYSGNDY 429
GYA++PH + +S++ +R+HL Q+LA + H Q++ + +L L Y G DY
Sbjct: 207 GYAFVPHSELVSIVITAFRSHLSQSLAVSMHSSMIFPQEKMVYPSLVLNNLSNQYPGQDY 266
Query: 430 SET----KAVIPIESLDSISTKSFPLCMRQLMNN*ELPIT*NMGAGYSMGLFLKGIGVTL 597
S + + I +E LD S +SFPLCMRQL + + G GLFLKGIG+TL
Sbjct: 267 SSSNWSGNSTINLEDLDEYSKQSFPLCMRQLHMSLKEHHHLRHGGRMQYGLFLKGIGMTL 326
Query: 598 EDS*GFGGKNSLRLWIWDK 654
E + F R+ DK
Sbjct: 327 EQAMTFWRSEFTRIMDMDK 345
Score = 60.1 bits (139), Expect = 5e-08
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Frame = +2
Query: 11 FIARELELFKMRFAVMRGERLEVFFKLNNLCYTTISEDEKNEVIQNLIESTP---YSKID 181
FI +EL+LF+ RF E + F N L YT I E+EK+ + + L+ S+ S +
Sbjct: 122 FIQQELDLFRYRFLREYSESVTQFLAENKLHYTPIPENEKDALNEKLVRSSSGISASMMA 181
Query: 182 NMKFYKVKFFEVLDLVKARKVFL 250
+ F+KV F E LDLV+ RKVF+
Sbjct: 182 HTDFFKVPFTEALDLVRGRKVFI 204
Score = 56.0 bits (129), Expect = 8e-07
Identities = 25/59 (42%), Positives = 32/59 (54%)
Frame = +3
Query: 471 YFNQVISSVYEATHEQLRIAHHLKHGGRLQYGLVLKRYWCDTGRLLRFWREEFIKIMDL 647
Y Q H L+ HHL+HGGR+QYGL LK + + FWR EF +IMD+
Sbjct: 285 YSKQSFPLCMRQLHMSLKEHHHLRHGGRMQYGLFLKGIGMTLEQAMTFWRSEFTRIMDM 343
>UniRef50_UPI0000E4784D Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 358
Score = 82.6 bits (195), Expect = 8e-15
Identities = 51/131 (38%), Positives = 71/131 (54%), Gaps = 4/131 (3%)
Frame = +1
Query: 283 FISVLAAQYRTHLKQNLAKACHHLCEIEQDERLVCLLKGLHQSYSGNDYSETK----AVI 450
FI LA +HL Q+LA + +E+D RL+ +L L + Y G DYS +K + I
Sbjct: 106 FILRLAYCRSSHLSQSLAITARGIPHLEEDGRLLPMLNNLSKQYLGQDYSNSKRSGNSAI 165
Query: 451 PIESLDSISTKSFPLCMRQLMNN*ELPIT*NMGAGYSMGLFLKGIGVTLEDS*GFGGKNS 630
+E ++ S +SFPLCMRQL + + G GLFLKGIG+TLE + F
Sbjct: 166 NLEDIEKYSKQSFPLCMRQLHMSLKEHHHLRHGGRMQYGLFLKGIGMTLEQAMTFWRSEF 225
Query: 631 LRLWIWDKFEK 663
R+ DKF+K
Sbjct: 226 TRIMDMDKFDK 236
Score = 56.0 bits (129), Expect = 8e-07
Identities = 25/59 (42%), Positives = 32/59 (54%)
Frame = +3
Query: 471 YFNQVISSVYEATHEQLRIAHHLKHGGRLQYGLVLKRYWCDTGRLLRFWREEFIKIMDL 647
Y Q H L+ HHL+HGGR+QYGL LK + + FWR EF +IMD+
Sbjct: 173 YSKQSFPLCMRQLHMSLKEHHHLRHGGRMQYGLFLKGIGMTLEQAMTFWRSEFTRIMDM 231
>UniRef50_A7NXV1 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=5; Magnoliophyta|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 438
Score = 74.5 bits (175), Expect = 2e-12
Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 5/125 (4%)
Frame = +1
Query: 256 GYAYIPHRDFISVLAAQYRTHLKQNLA---KACHHLCEIEQDERLVCLLKGLHQSYSGND 426
G+AY+ +S++ Q+R+HL + L + ++ ERL +++ L SY G D
Sbjct: 180 GHAYVAMNQVVSLVVTQFRSHLSKALVLTNRKWTSTIREQEKERLTPIVEALSTSYLGPD 239
Query: 427 YSETKAV--IPIESLDSISTKSFPLCMRQLMNN*ELPIT*NMGAGYSMGLFLKGIGVTLE 600
YS+ + I I+ +D ++ SFPLCMR L G +GLFLKG+G+ L+
Sbjct: 240 YSQPREFVEISIKDIDQVANSSFPLCMRHLFEKLREDHHLKHGGRMQLGLFLKGVGLKLD 299
Query: 601 DS*GF 615
D+ F
Sbjct: 300 DALAF 304
Score = 46.0 bits (104), Expect = 9e-04
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +3
Query: 513 EQLRIAHHLKHGGRLQYGLVLKRYWCDTGRLLRFWREEF 629
E+LR HHLKHGGR+Q GL LK L FW+ EF
Sbjct: 271 EKLREDHHLKHGGRMQLGLFLKGVGLKLDDALAFWKAEF 309
>UniRef50_O02334 Cluster: DNA primase large subunit; n=2;
Caenorhabditis|Rep: DNA primase large subunit -
Caenorhabditis elegans
Length = 503
Score = 74.5 bits (175), Expect = 2e-12
Identities = 42/141 (29%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Frame = +1
Query: 256 GYAYIPHRDFISVLAAQYRTHLKQNLAKACHHLCEIEQDERLVCLLKGL-HQSYSGNDYS 432
G+AY P D +++L + + ++ +A++ HL +E++ RL+ L L + +YSG DY+
Sbjct: 224 GFAYFPFDDLVTILVTKMKNNMMAAMARSFKHLAILEEEGRLLPRLSLLSNNAYSGKDYN 283
Query: 433 ----ETKAVIPIESLDSISTKSFPLCMRQLMNN*ELPIT*NMGAGYSMGLFLKGIGVTLE 600
+ ++ +D +S +SF CM+Q+ N+ + GA GLFLKGIG++L+
Sbjct: 284 GEQPDGSIIVTRHMIDKLSRRSFAPCMKQMHNHLRVNHHLKYGARRQYGLFLKGIGLSLD 343
Query: 601 DS*GFGGKNSLRLWIWDKFEK 663
++ + DKF+K
Sbjct: 344 EAIAMMRDEFTKKITSDKFDK 364
Score = 43.2 bits (97), Expect = 0.006
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +3
Query: 510 HEQLRIAHHLKHGGRLQYGLVLKRYWCDTGRLLRFWREEFIK 635
H LR+ HHLK+G R QYGL LK + R+EF K
Sbjct: 314 HNHLRVNHHLKYGARRQYGLFLKGIGLSLDEAIAMMRDEFTK 355
>UniRef50_Q84WJ2 Cluster: Probable DNA primase large subunit; n=3;
Arabidopsis thaliana|Rep: Probable DNA primase large
subunit - Arabidopsis thaliana (Mouse-ear cress)
Length = 454
Score = 73.7 bits (173), Expect = 4e-12
Identities = 46/142 (32%), Positives = 76/142 (53%), Gaps = 6/142 (4%)
Frame = +1
Query: 256 GYAYIPHRDFISVLAAQYRTHLKQNLA----KACHHLCEIEQDERLVCLLKGLHQSYSGN 423
G+A++ +S++ Q+R+HL + L K + E E+D RL +++ L SY G
Sbjct: 195 GFAFVAGTQLVSLVVTQFRSHLSKALILTNRKWTTTIREREKD-RLTPIVEALSTSYLGP 253
Query: 424 DYSETK--AVIPIESLDSISTKSFPLCMRQLMNN*ELPIT*NMGAGYSMGLFLKGIGVTL 597
DYS++ A I ++ +D +S SFPLCMR L G +GLFLKG+G+ L
Sbjct: 254 DYSQSNEYADISLKDIDQVSKSSFPLCMRHLFEKLREDHHLKHGGRMQLGLFLKGVGLKL 313
Query: 598 EDS*GFGGKNSLRLWIWDKFEK 663
+D+ F + + ++F+K
Sbjct: 314 DDALAFWREEFTKKVGSERFDK 335
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = +3
Query: 513 EQLRIAHHLKHGGRLQYGLVLKRYWCDTGRLLRFWREEFIK 635
E+LR HHLKHGGR+Q GL LK L FWREEF K
Sbjct: 286 EKLREDHHLKHGGRMQLGLFLKGVGLKLDDALAFWREEFTK 326
>UniRef50_UPI00015B41BD Cluster: PREDICTED: similar to GM13640p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GM13640p - Nasonia vitripennis
Length = 535
Score = 72.5 bits (170), Expect = 9e-12
Identities = 44/118 (37%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Frame = +1
Query: 256 GYAYIPHRDFISVLAAQYRTHLKQNLAKACHHLCEIEQDERLVCLLKGLHQSYSG-NDYS 432
G AY+P D I+V +RT+L L KA + DERL LK L + ++G
Sbjct: 213 GIAYVPQNDLITVFLTHFRTNLSIELNKARKFVLNNLDDERLQSFLKSLPECFTGMAKVV 272
Query: 433 ETKAVIPIESLDSISTKSFPLCMRQLMNN*ELPIT*NMGAGYSMGLFLKGIGVTLEDS 606
+PI L+ +S S+PLCMR + + GLFLKG+GVTLEDS
Sbjct: 273 WNSQNVPIAKLNDLSKTSYPLCMRIMHEHLTTNHHLKNTGRLQYGLFLKGVGVTLEDS 330
Score = 54.0 bits (124), Expect = 3e-06
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +2
Query: 23 ELELFKMRFAVMRGERLEVFFKLNNLCYTTISEDEKNEVIQNLIEST-PYSKIDNMKFYK 199
E ELFK+RF + E L F + L Y+ +S++ K + +NL ST +N FY+
Sbjct: 134 ETELFKLRFHSLNREGLTQFLATSGLHYSPVSQEFKEQNRENLYMSTAKEGDFENTDFYE 193
Query: 200 VKFFEVLDLVKARKVFLN 253
+ F +V+DL+ RKV+L+
Sbjct: 194 LPFDKVVDLISDRKVYLH 211
Score = 44.0 bits (99), Expect = 0.004
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = +3
Query: 510 HEQLRIAHHLKHGGRLQYGLVLKRYWCDTGRLLRFWREEFIKIMD 644
HE L HHLK+ GRLQYGL LK + FW+ E K D
Sbjct: 299 HEHLTTNHHLKNTGRLQYGLFLKGVGVTLEDSIEFWKSEMTKKED 343
>UniRef50_UPI000051A375 Cluster: PREDICTED: similar to DNAprim
CG5553-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
to DNAprim CG5553-PA - Apis mellifera
Length = 474
Score = 66.5 bits (155), Expect = 6e-10
Identities = 35/94 (37%), Positives = 61/94 (64%), Gaps = 3/94 (3%)
Frame = +2
Query: 11 FIARELELFKMRFAVMRGERLEVFFKLNNLCYTTISEDEKNEVIQNLIESTPYSK---ID 181
FI +E+ELFK+RF+ + E +E ++N+ I+++EK+E+ + L ST K ID
Sbjct: 135 FINQEIELFKLRFSSLDKEGIEKLLSMHNIDCQQITQEEKDEIREELRLSTSSIKVLNID 194
Query: 182 NMKFYKVKFFEVLDLVKARKVFLNVDTLIYLTEI 283
+FYKV F+ V DL+++R+V+L+ + Y+ +I
Sbjct: 195 MTEFYKVSFYRVSDLIRSRRVYLS-QGIAYIPQI 227
Score = 65.7 bits (153), Expect = 1e-09
Identities = 38/120 (31%), Positives = 57/120 (47%)
Frame = +1
Query: 256 GYAYIPHRDFISVLAAQYRTHLKQNLAKACHHLCEIEQDERLVCLLKGLHQSYSGNDYSE 435
G AYIP D +S+ + +R +L + A + + D+R+ LK +
Sbjct: 220 GIAYIPQIDLVSLFLSYFRKNLLDGMPAAKMSIIRMHGDDRIQSYLKSVPNISDKTCVIW 279
Query: 436 TKAVIPIESLDSISTKSFPLCMRQLMNN*ELPIT*NMGAGYSMGLFLKGIGVTLEDS*GF 615
T + P + LD +S S+P+CMR L + GLF+KGIGVT+EDS F
Sbjct: 280 TSSATPTDKLDELSKTSYPMCMRILHEALKSNHHLKNSGRIQYGLFIKGIGVTMEDSLSF 339
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +3
Query: 510 HEQLRIAHHLKHGGRLQYGLVLKRYWCDTGRLLRFWREEFIKIMD 644
HE L+ HHLK+ GR+QYGL +K L FW+ EF K +D
Sbjct: 305 HEALKSNHHLKNSGRIQYGLFIKGIGVTMEDSLSFWKTEFTKKID 349
>UniRef50_A6R582 Cluster: DNA primase large subunit; n=5;
Eurotiomycetidae|Rep: DNA primase large subunit -
Ajellomyces capsulatus NAm1
Length = 536
Score = 62.5 bits (145), Expect = 9e-09
Identities = 44/141 (31%), Positives = 77/141 (54%), Gaps = 7/141 (4%)
Frame = +1
Query: 256 GYAYIPHRDFISVLAAQYRTHLKQNLAKACHHLCEIEQDERLVCLLKGLHQSYSGND--Y 429
G AY+P R+ +S++ A++ L++ L L +++D+RL +L+ L +++ +D Y
Sbjct: 252 GKAYVPVREQLSMVLAEFTARLEKALEFTSRALPRLDEDDRLTPILEHLSKNFGTSDSSY 311
Query: 430 SETKAVIP-----IESLDSISTKSFPLCMRQLMNN*ELPIT*NMGAGYSMGLFLKGIGVT 594
+E + +P S+DS+S + FPLCMR L LFLKGIG++
Sbjct: 312 AEGEGSVPGAPITAASIDSLS-QHFPLCMRNLHMQLRKNSHLKHFGRLQYTLFLKGIGLS 370
Query: 595 LEDS*GFGGKNSLRLWIWDKF 657
LED+ F + S +++ D+F
Sbjct: 371 LEDALVF-WRESFKIFTDDEF 390
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/82 (30%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +2
Query: 8 RFIARELELFKMRFAVMRGERLEVFFKLNNLCYTTISEDEKNEVIQNLIEST-PYSKIDN 184
RF E LFK RF + + F + N + +S++EK+E+ ++L+ ST ++++
Sbjct: 168 RFTRLETMLFKFRFQLDDSKERRAFIESLNFNWDMVSDEEKHELGESLLASTYGVRRLED 227
Query: 185 MKFYKVKFFEVLDLVKARKVFL 250
++KV + +V +LV+ R VF+
Sbjct: 228 ESWFKVDWEKVPELVERRGVFV 249
Score = 42.3 bits (95), Expect = 0.011
Identities = 22/40 (55%), Positives = 22/40 (55%)
Frame = +3
Query: 510 HEQLRIAHHLKHGGRLQYGLVLKRYWCDTGRLLRFWREEF 629
H QLR HLKH GRLQY L LK L FWRE F
Sbjct: 343 HMQLRKNSHLKHFGRLQYTLFLKGIGLSLEDALVFWRESF 382
>UniRef50_UPI0000D570E8 Cluster: PREDICTED: similar to CG5553-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG5553-PA - Tribolium castaneum
Length = 474
Score = 61.7 bits (143), Expect = 2e-08
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
Frame = +1
Query: 256 GYAYIPHRDFISVLAAQYRTHLKQNLAKACHHLCEIEQDERLVCLLKGLHQSYSGNDY-- 429
G+AYIP + + + +++R L + L H + + DER+ LL H ++G +Y
Sbjct: 213 GFAYIPSSELVVCIQSKFRAELSEELTWYSHRI-HLFDDERIGPLLSNFHNLHTGQNYRV 271
Query: 430 SETKAVIPIESLDSISTKSFPLCMRQLMNN*ELPIT*NMGAGYSMGLFLKGIGVTLEDS* 609
E + LD+ + K FPLCM+ + + GLFLK IG+ ED+
Sbjct: 272 RENHESVDPADLDAYAKKHFPLCMKHMHEVLRSEHHHKHQGRLTYGLFLKAIGLLYEDAL 331
Query: 610 GFGGKNSLRLWIWDKFEK 663
F + ++FEK
Sbjct: 332 KFWRDEFTKKMDLNQFEK 349
Score = 59.3 bits (137), Expect = 9e-08
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = +2
Query: 11 FIARELELFKMRFAVMRGERLEVFFKLNNLCYTTISEDEKNEVIQNLIESTP-YSKIDNM 187
F++RELE F +RF E ++ F +L YT ISE+EK + L ST +
Sbjct: 130 FLSRELEWFWIRFTAQSREGVKNFLRLYKFSYTPISEEEKVSLRHELEASTAGLILFEET 189
Query: 188 KFYKVKFFEVLDLVKARKVFL 250
+F+KV F EV LV+ RKVFL
Sbjct: 190 EFFKVPFTEVCSLVRGRKVFL 210
Score = 52.8 bits (121), Expect = 8e-06
Identities = 26/46 (56%), Positives = 28/46 (60%)
Frame = +3
Query: 510 HEQLRIAHHLKHGGRLQYGLVLKRYWCDTGRLLRFWREEFIKIMDL 647
HE LR HH KH GRL YGL LK L+FWR+EF K MDL
Sbjct: 299 HEVLRSEHHHKHQGRLTYGLFLKAIGLLYEDALKFWRDEFTKKMDL 344
>UniRef50_P20457 Cluster: DNA primase large subunit; n=10;
Saccharomycetales|Rep: DNA primase large subunit -
Saccharomyces cerevisiae (Baker's yeast)
Length = 528
Score = 57.2 bits (132), Expect = 4e-07
Identities = 36/127 (28%), Positives = 68/127 (53%), Gaps = 10/127 (7%)
Frame = +1
Query: 256 GYAYIPHRDFISVLAAQYRTHLKQNLAKACHHLCEIEQDERLVCLLKGLHQSYSGNDYSE 435
GYAY+P +++L+ ++ + L Q L K +L + +D+RL+ +L L Y+ D+++
Sbjct: 246 GYAYLPQFQQLNLLSNEFASKLNQELIKTYQYLPRLNEDDRLLPILNHLSSGYTIADFNQ 305
Query: 436 TKAVIPIESL-DSISTKS---------FPLCMRQLMNN*ELPIT*NMGAGYSMGLFLKGI 585
KA E++ D I+ +S +PLC++ LM + + LFLKGI
Sbjct: 306 QKANQFSENVDDEINAQSVWSEEISSNYPLCIKNLMEGLKKNHHLRYYGRQQLSLFLKGI 365
Query: 586 GVTLEDS 606
G++ +++
Sbjct: 366 GLSADEA 372
Score = 34.3 bits (75), Expect = 2.9
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 513 EQLRIAHHLKHGGRLQYGLVLKRYWCDTGRLLRFWREEFIK 635
E L+ HHL++ GR Q L LK L+FW E F +
Sbjct: 342 EGLKKNHHLRYYGRQQLSLFLKGIGLSADEALKFWSEAFTR 382
>UniRef50_A7TLL5 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 515
Score = 54.0 bits (124), Expect = 3e-06
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 9/129 (6%)
Frame = +1
Query: 256 GYAYIPHRDFISVLAAQYRTHLKQNLAKACHHLCEIEQDERLVCLLKGLHQSYSGNDYSE 435
GYAY+P +++L+ ++ L L K L + +D+RL+ +L L YS D+
Sbjct: 239 GYAYLPQFQQLNLLSTEFSNKLSDELMKTYQFLPRLNEDDRLIPILHHLSSGYSIADFQS 298
Query: 436 TKAVIPIESLDSISTKS---------FPLCMRQLMNN*ELPIT*NMGAGYSMGLFLKGIG 588
++ + I+ KS +PLC++ LM+ + FLKGIG
Sbjct: 299 SQQFNSSNEDNEINAKSVYSKEISECYPLCVKNLMDGLNETHHLRYNGRQQLSFFLKGIG 358
Query: 589 VTLEDS*GF 615
++ +++ F
Sbjct: 359 LSCDEAMNF 367
>UniRef50_O74761 Cluster: DNA primase large subunit; n=2;
Schizosaccharomyces pombe|Rep: DNA primase large subunit
- Schizosaccharomyces pombe (Fission yeast)
Length = 459
Score = 51.6 bits (118), Expect = 2e-05
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 3/139 (2%)
Frame = +1
Query: 256 GYAYIPHRDFISVLAAQYRTHLKQNLAKACHHLCEIEQDERLVCLLKGLHQSYSGNDYS- 432
GYAY+P + +S++ ++ +LK+ L L +++D+RL+ +L L + + + S
Sbjct: 209 GYAYVPFSEQVSLVVEEFEENLKKALESTAKSLPRLDEDDRLLPILNHLSKGFVAPESSI 268
Query: 433 --ETKAVIPIESLDSISTKSFPLCMRQLMNN*ELPIT*NMGAGYSMGLFLKGIGVTLEDS 606
I +DS FPLC + L + GLFLK IG++++++
Sbjct: 269 VAPKSGAITAGQVDSF-VSHFPLCAKHLHEVLKRDKHLRHFGRLQYGLFLKDIGLSVDEA 327
Query: 607 *GFGGKNSLRLWIWDKFEK 663
F K+ + DKF K
Sbjct: 328 LVFWRKSFTNV-TEDKFNK 345
Score = 50.8 bits (116), Expect = 3e-05
Identities = 26/82 (31%), Positives = 46/82 (56%)
Frame = +2
Query: 8 RFIARELELFKMRFAVMRGERLEVFFKLNNLCYTTISEDEKNEVIQNLIESTPYSKIDNM 187
RF+ E LF+ RF + F + + ++S++EK +V ++++ I+N
Sbjct: 127 RFLRAESTLFRFRFVNEETRERQAFIDSLDFQWESVSQEEK-DVFYEKLQASSQRNIENE 185
Query: 188 KFYKVKFFEVLDLVKARKVFLN 253
F+KV FF+V DLV+ R VF++
Sbjct: 186 SFFKVPFFKVPDLVERRAVFVH 207
Score = 44.4 bits (100), Expect = 0.003
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = +3
Query: 510 HEQLRIAHHLKHGGRLQYGLVLKRYWCDTGRLLRFWREEFIKIMD 644
HE L+ HL+H GRLQYGL LK L FWR+ F + +
Sbjct: 296 HEVLKRDKHLRHFGRLQYGLFLKDIGLSVDEALVFWRKSFTNVTE 340
>UniRef50_Q8NIZ4 Cluster: Probable DNA primase large subunit; n=11;
Pezizomycotina|Rep: Probable DNA primase large subunit -
Neurospora crassa
Length = 513
Score = 51.2 bits (117), Expect = 2e-05
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Frame = +1
Query: 256 GYAYIPHRDFISVLAAQYRTHLKQNLAKACHHLCEIEQDERLVCLLKGLHQ-------SY 414
GYAY+P R+ +++ +++ + L++ L L +++D+RL +L L + SY
Sbjct: 227 GYAYVPAREQQAMVVSEFSSRLERQLELTARALPRLDEDDRLTPILAHLSKNFITPDASY 286
Query: 415 SGNDYSETKAVIPIESLDS-ISTKSFPLCMRQLMNN*ELPIT*NMGAGYSMGLFLKGIGV 591
G + + A I ++D+ ++ FP CM L LFLKGIG+
Sbjct: 287 VGTSSAISSADISARNIDTLVNNHHFPACMSHLHRTLRRDAHLKHYGRLQYTLFLKGIGL 346
Query: 592 TLED 603
LE+
Sbjct: 347 NLEE 350
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/45 (51%), Positives = 25/45 (55%)
Frame = +3
Query: 510 HEQLRIAHHLKHGGRLQYGLVLKRYWCDTGRLLRFWREEFIKIMD 644
H LR HLKH GRLQY L LK + L FWR+ F KI D
Sbjct: 320 HRTLRRDAHLKHYGRLQYTLFLKGIGLNLEECLLFWRQSFNKITD 364
Score = 36.7 bits (81), Expect = 0.53
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 12/93 (12%)
Frame = +2
Query: 8 RFIARELELFKMRFAVMRGERLEVFFKLNNLCYTTISEDEKNEVIQNLIESTPYS----- 172
RF E LF+MR G F NL + T+S++EK E+ L + +
Sbjct: 132 RFTRVETMLFRMRLNADDGRERAAFINSLNLDWETVSDEEKRELAAELAATASFGGYKKG 191
Query: 173 -------KIDNMKFYKVKFFEVLDLVKARKVFL 250
+ D + KV + V +LV+ R+VFL
Sbjct: 192 QQQQQQYEEDQQTWCKVSWLRVPELVEQRRVFL 224
>UniRef50_A4S4I3 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 488
Score = 50.8 bits (116), Expect = 3e-05
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 4/121 (3%)
Frame = +1
Query: 256 GYAYIPHRDFISVLAAQYRTHLKQNLAKACHHLCEIEQDE--RLVCLLKGLH--QSYSGN 423
G A+I ++ +++T L + +A+A + E+ E RL LLK +H +S SG
Sbjct: 211 GNAWIRKETLDQLVFGRFKTMLNKMVAEAITLFNKFEKKEAHRLTPLLKSVHNRRSGSGY 270
Query: 424 DYSETKAVIPIESLDSISTKSFPLCMRQLMNN*ELPIT*NMGAGYSMGLFLKGIGVTLED 603
D+ + I +++ + +SFPLCMRQL + G + L+LKGIG+ L+
Sbjct: 271 DFQGEDGTMSIAGIEA-TQESFPLCMRQLYKALKKDHHLTHGGRRQLQLYLKGIGLPLDQ 329
Query: 604 S 606
+
Sbjct: 330 A 330
Score = 37.9 bits (84), Expect = 0.23
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +3
Query: 510 HEQLRIAHHLKHGGRLQYGLVLKRYWCDTGRLLRFWREEFIK 635
++ L+ HHL HGGR Q L LK + L FW+ EF K
Sbjct: 299 YKALKKDHHLTHGGRRQLQLYLKGIGLPLDQALVFWKTEFTK 340
>UniRef50_Q00Z54 Cluster: Eukaryotic-type DNA primase, large
subunit; n=1; Ostreococcus tauri|Rep: Eukaryotic-type
DNA primase, large subunit - Ostreococcus tauri
Length = 511
Score = 48.8 bits (111), Expect = 1e-04
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 7/124 (5%)
Frame = +1
Query: 256 GYAYIPHRDFISVLAAQYRTHLKQNLAKA--CHHLCEIEQDERLVCLLKGLHQSYSGNDY 429
G A+I ++ ++RT L + KA E+ + RL LL+ +H SG Y
Sbjct: 234 GRAWIRKETLDQLVFGRFRTRLSLGMKKAKELFKQFEVAEANRLAPLLRAVHNKRSGRAY 293
Query: 430 S-----ETKAVIPIESLDSISTKSFPLCMRQLMNN*ELPIT*NMGAGYSMGLFLKGIGVT 594
E + + I ++ + SFPLCMRQL N + G L+LKGIG+
Sbjct: 294 EGRRAYEGEGTMSISGIEQ-TQDSFPLCMRQLHNALKKKHHLTHGGRRQYQLYLKGIGLP 352
Query: 595 LEDS 606
L+ +
Sbjct: 353 LDQA 356
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = +3
Query: 510 HEQLRIAHHLKHGGRLQYGLVLKRYWCDTGRLLRFWREEFIKIMD 644
H L+ HHL HGGR QY L LK + L FW+ EF K D
Sbjct: 325 HNALKKKHHLTHGGRRQYQLYLKGIGLPLDQALVFWKTEFTKSPD 369
>UniRef50_Q4MZT6 Cluster: DNA primase large subunit, putative; n=2;
Theileria|Rep: DNA primase large subunit, putative -
Theileria parva
Length = 624
Score = 48.8 bits (111), Expect = 1e-04
Identities = 31/123 (25%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Frame = +1
Query: 262 AYIPHRDFISVLAAQYRTHLKQNLAKACHHLCEIEQ----DERLVCLLKGLHQSYSGNDY 429
AY+P V++ ++R L+ ++ + ++ DERL ++ L +SY NDY
Sbjct: 254 AYVPPNSLFIVISTKFRNELQHSMKYLNENQSMLDSVIVNDERLCDFMRVLPESYLANDY 313
Query: 430 SETKAV----IPIESLDSISTKSFPLCMRQLMNN*ELPIT*NMGAGYSMGLFLKGIGVTL 597
S+ + + +++ + +FP CMR++ ++ + LFLKG G+T+
Sbjct: 314 SKITFTDDTRLTLSNINQVYKFTFPPCMRRMFSHLLKNHHIKHEGRQQLWLFLKGCGLTM 373
Query: 598 EDS 606
E+S
Sbjct: 374 EES 376
>UniRef50_A5K6H8 Cluster: DNA primase, large subunit, putative; n=6;
Plasmodium|Rep: DNA primase, large subunit, putative -
Plasmodium vivax
Length = 547
Score = 47.6 bits (108), Expect = 3e-04
Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 9/143 (6%)
Frame = +1
Query: 262 AYIPHRDFISVLAAQYRTHLKQN---LAKACHHLCEIEQDERLVCLLKGLHQSYSGNDYS 432
AY+P ++L Q++ +K++ L + L + D R+ L L ++Y DY
Sbjct: 277 AYVPDIYLDAILVTQFKITIKESFKYLEQNEKLLLNVHNDSRISSFLAALPKAYVAKDYR 336
Query: 433 ET-----KAVIPIESLDSISTKSFPLCMRQLMNN*ELPIT*NMGAGYSMGLFLKGIGVTL 597
+ + + ++L S+ +SFP CMR++ N + LFLKG G+TL
Sbjct: 337 QNYEHTQETRLMPQNLYSVYKQSFPPCMRRIFVNFLKEKHLKHWGRQQLWLFLKGAGMTL 396
Query: 598 EDS*GFGGKNSLRLWIW-DKFEK 663
E++ +++ +W+ DKF+K
Sbjct: 397 EEN----IQSNRSIWLQPDKFDK 415
>UniRef50_Q6C2W5 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome F of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 469
Score = 46.4 bits (105), Expect = 7e-04
Identities = 22/45 (48%), Positives = 26/45 (57%)
Frame = +3
Query: 510 HEQLRIAHHLKHGGRLQYGLVLKRYWCDTGRLLRFWREEFIKIMD 644
H LR +HLKH GR QYGL +K L+FWRE F K+ D
Sbjct: 298 HTTLRQKNHLKHDGRFQYGLFIKGLGFSVDEALQFWREAF-KVTD 341
Score = 34.7 bits (76), Expect = 2.2
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +2
Query: 11 FIARELELFKMRFAVMRGERLEVFFKLNNLCYTTISEDEKNEVIQNLIESTPYSKID--N 184
F+ RE LF+ R ++ G + F + + + DE + ++ +E+ K D +
Sbjct: 128 FVEREKLLFRYRLSLEEGGERDSFVNSLDFEWEKVDVDEFED-LRPYLETVSRDKADIAS 186
Query: 185 MKFYKVKFFEVLDLVKARKVFL 250
+ KV + +V DLV +R+VFL
Sbjct: 187 RDYVKVDWQKVADLVDSRRVFL 208
>UniRef50_Q5KAH0 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 502
Score = 46.0 bits (104), Expect = 9e-04
Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Frame = +1
Query: 256 GYAYIPHRDFISVLAAQYRTHLKQNLAKACHHLCEIEQDERLVCLLKGLHQSY-SG---N 423
G A++P +S++ + L++ L +L +++DERL ++ L S+ SG +
Sbjct: 219 GLAFVPQSLQLSLVLQVFADRLEKALEFTAKNLPRLDEDERLGPVIDHLASSFLSGIGAS 278
Query: 424 DYSETKAV-----IPIESLDSISTKSFPLCMRQLMNN*ELPIT*NMGAGYSMGLFLKGIG 588
DY + + + +++D ++ K FP CMR L + + LFLKG+G
Sbjct: 279 DYQPSDELGDGMTVTADTIDDVARKHFPPCMRHLYEKLKKDHHLKHWGRLQLTLFLKGLG 338
Query: 589 VTLEDS*GFGGKNSLRLWIWDKFEK 663
+ L+ + F ++ DKF K
Sbjct: 339 LPLDQAILFWRRSYGTSMTDDKFNK 363
Score = 44.8 bits (101), Expect = 0.002
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Frame = +2
Query: 8 RFIARELELFKMRFAVMRGERLEVFFKLNNLCYTTISEDEKNEVIQNLIESTPY-SKIDN 184
RF+ EL LFK RF F + + Y T+ EDEK + L + P SK D
Sbjct: 133 RFVRSELALFKSRFETDDKNERAAFLRSLSFNYDTVGEDEKKFLKAELQQMLPKGSKEDA 192
Query: 185 MK--FYKVKFFEVLDLVKARKVFL 250
+ ++KV ++ V DLV AR+V +
Sbjct: 193 ISETWFKVPWYTVPDLVGARRVLV 216
Score = 38.3 bits (85), Expect = 0.18
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +3
Query: 510 HEQLRIAHHLKHGGRLQYGLVLKRYWCDTGRLLRFWREEF 629
+E+L+ HHLKH GRLQ L LK + + FWR +
Sbjct: 313 YEKLKKDHHLKHWGRLQLTLFLKGLGLPLDQAILFWRRSY 352
>UniRef50_UPI0000D56ED4 Cluster: PREDICTED: similar to CG5553-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG5553-PA - Tribolium castaneum
Length = 311
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/44 (47%), Positives = 24/44 (54%)
Frame = +3
Query: 510 HEQLRIAHHLKHGGRLQYGLVLKRYWCDTGRLLRFWREEFIKIM 641
+E L+ HHLKH R Q GL LK L W+ EFIKIM
Sbjct: 136 YENLQKNHHLKHFSRFQLGLFLKGIGLSLTNALELWKSEFIKIM 179
>UniRef50_A7AVK1 Cluster: DNA primase, large subunit; n=1; Babesia
bovis|Rep: DNA primase, large subunit - Babesia bovis
Length = 520
Score = 44.4 bits (100), Expect = 0.003
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Frame = +1
Query: 256 GYAYIPHRDFISVLAAQYRTHLKQNLAKACHHLCEIEQ-----DERLVCLLKGLHQSYSG 420
G AY+P+ + ++++R + QN ++ I+ DER+ L+ L +SY
Sbjct: 255 GQAYVPNTLLHILCSSKFRQQV-QNSLRSLDEAGTIDAAKPFVDERISGFLRVLPESYLA 313
Query: 421 NDYSETKAV------IPIESLDSISTKSFPLCMRQLMNN*ELPIT*NMGAGYSMGLFLKG 582
DYS + V + + +++SI ++FP CMR++ + A LFLKG
Sbjct: 314 TDYSRSNYVPGENESLNLANVNSIFRQTFPPCMRRIFTHYVNSRHLKHNARRQFWLFLKG 373
Query: 583 IGVTLEDS 606
G++LE++
Sbjct: 374 CGMSLEEN 381
>UniRef50_Q6CL91 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=2; Saccharomycetaceae|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 493
Score = 44.0 bits (99), Expect = 0.004
Identities = 28/123 (22%), Positives = 58/123 (47%), Gaps = 6/123 (4%)
Frame = +1
Query: 256 GYAYIPHRDFISVLAAQYRTHLKQNLAKACHHLCEIEQDERLVCLLKGLHQSYSGNDYSE 435
G+AY+P +++++ ++ L+ L + ++ +D+R++ +L L Y + E
Sbjct: 231 GWAYVPQFQQLNLISNEFSDCLQTELMGTYQMIPKLNEDDRILPILHHLSSGYVVTESQE 290
Query: 436 TKAVIPIESLD--SISTKS----FPLCMRQLMNN*ELPIT*NMGAGYSMGLFLKGIGVTL 597
+ S+ TK FPLC +QLM + + FLKGIG+++
Sbjct: 291 LNGAGVNDEFTHRSVKTKKVMEHFPLCAKQLMEQLQTNHHLRYQGRQQLSFFLKGIGLSV 350
Query: 598 EDS 606
+++
Sbjct: 351 DEA 353
Score = 35.9 bits (79), Expect = 0.93
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 513 EQLRIAHHLKHGGRLQYGLVLKRYWCDTGRLLRFWREEF 629
EQL+ HHL++ GR Q LK L+FW E F
Sbjct: 323 EQLQTNHHLRYQGRQQLSFFLKGIGLSVDEALQFWTESF 361
Score = 33.5 bits (73), Expect = 5.0
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Frame = +2
Query: 8 RFIARELELFKMRFAVMRGERLEVFFKLNNLCYT-TISEDEKN----EVIQ--------- 145
+F+ E LFK+RF ++ + F +L Y +I E+EK E+ Q
Sbjct: 132 KFVRAETLLFKIRFQMLTTQDQLNFISSLDLPYVNSIDEEEKQSLSTELYQTVSHLLTFQ 191
Query: 146 -NLIESTPYSKIDNM-KFYKVKFFEVLDLVKARKVFL 250
NL E T + N K+YK+ V+DLV +R++F+
Sbjct: 192 LNLTEETQRRQFFNREKYYKLPMENVMDLVGSRQIFI 228
>UniRef50_A2G4G7 Cluster: Eukaryotic-type DNA primase, large subunit
family protein; n=1; Trichomonas vaginalis G3|Rep:
Eukaryotic-type DNA primase, large subunit family
protein - Trichomonas vaginalis G3
Length = 457
Score = 43.2 bits (97), Expect = 0.006
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +3
Query: 510 HEQLRIAHHLKHGGRLQYGLVLKRYWCDTGRLLRFWREEFIKIMDL 647
++ L+ H L H GRLQ+GL LK L+FWR EF K + L
Sbjct: 286 YDALKKNHKLFHSGRLQFGLYLKGIGLTMDESLKFWRSEFTKAISL 331
Score = 39.1 bits (87), Expect = 0.10
Identities = 30/139 (21%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Frame = +1
Query: 256 GYAYIPHRDFISVLAAQYRTHLKQNLAKACHHLCEIEQDERLVCLLKGLHQSYSGNDYSE 435
G+ + ++ S Y+ +L++ +A+ + +I + L + L +G+ ++
Sbjct: 202 GFVEVSPKELDSFFTKLYQIYLEKRIAR--YRAAKIHSSD-LTKIAISLFDERAGSFVAK 258
Query: 436 TK---AVIPIESLDSISTKSFPLCMRQLMNN*ELPIT*NMGAGYSMGLFLKGIGVTLEDS 606
++ + + ++ +D++ +SFP CMR + + + GL+LKGIG+T+++S
Sbjct: 259 SRQNFSRVTLQDMDAV-IRSFPPCMRSMYDALKKNHKLFHSGRLQFGLYLKGIGLTMDES 317
Query: 607 *GFGGKNSLRLWIWDKFEK 663
F + D FEK
Sbjct: 318 LKFWRSEFTKAISLDDFEK 336
>UniRef50_Q4P7R1 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 543
Score = 43.2 bits (97), Expect = 0.006
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = +2
Query: 8 RFIARELELFKMRFAVMRGERLEVFFKLNNLCYTTISEDEKNEVIQNLIESTP--YSKID 181
RF+ E LF++RF E F + L + +S +EK+ + L+ + P + +
Sbjct: 143 RFVKAESLLFRLRFETDDAVERESFMRDLKLDWQPVSSEEKSMYREQLVATHPKMATTFE 202
Query: 182 NMKFYKVKFFEVLDLVKARKVFL 250
+ F+KV + V DLV+ R+VF+
Sbjct: 203 SETFFKVDWTRVTDLVEKRRVFM 225
Score = 41.5 bits (93), Expect = 0.019
Identities = 32/145 (22%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Frame = +1
Query: 256 GYAYIPHRDFISVLAAQYRTHLKQNLAKACHHLCEIEQDERLVCLLK--------GLHQS 411
G A++P ++ S++ A++++ L ++L L +++D+RL+ +L G+
Sbjct: 228 GQAWVPIKEQSSLVLAEFQSRLLRDLEMTARALPRLDEDDRLLPVLSHLSMGFLAGISTD 287
Query: 412 YSGNDY-SETKAVIPIESLDSISTKSFPLCMRQLMNN*ELPIT*NMGAGYSMGLFLKGIG 588
Y+G+ ++ + +D++ P+CM+ L + LFLK +G
Sbjct: 288 YTGSSITADGSTTVTAGMVDALVKTHAPMCMKNLQSTLTTTGHLKHYGRLQYNLFLKELG 347
Query: 589 VTLEDS*GFGGKNSLRLWIWDKFEK 663
+ +E++ F + S + DKF K
Sbjct: 348 LPVEEALVF-WRRSFKHITDDKFNK 371
Score = 39.1 bits (87), Expect = 0.10
Identities = 19/37 (51%), Positives = 19/37 (51%)
Frame = +3
Query: 534 HLKHGGRLQYGLVLKRYWCDTGRLLRFWREEFIKIMD 644
HLKH GRLQY L LK L FWR F I D
Sbjct: 330 HLKHYGRLQYNLFLKELGLPVEEALVFWRRSFKHITD 366
>UniRef50_UPI00006CBF5C Cluster: hypothetical protein
TTHERM_00310750; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00310750 - Tetrahymena
thermophila SB210
Length = 297
Score = 37.9 bits (84), Expect = 0.23
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Frame = +2
Query: 113 ISEDEKNEVIQNLIESTPYSKIDNMKF--YKVKFFE-VLDLVKARKVFLNVDTLIYLTEI 283
+ +++KN+++Q D + F +K +++E +DL+ +F+N + + T I
Sbjct: 30 LQKEQKNKILQQKTTENQQQLFDQITFQPFKQEYYEETIDLLT--DIFVNQEPVCKSTNI 87
Query: 284 SYQFLQHSIEHI*NKIWPKLAIICVKLNKMNDLFVC*KAYINLI 415
S+Q L+ IE I KI L+ I ++ K D +C K +I
Sbjct: 88 SFQDLRQFIEQI-VKIGSNLSSIAIQKYKDQDGNICSKVISAII 130
>UniRef50_Q246C7 Cluster: Eukaryotic-type DNA primase, large subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Eukaryotic-type DNA primase, large subunit family
protein - Tetrahymena thermophila SB210
Length = 517
Score = 37.1 bits (82), Expect = 0.40
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3
Query: 534 HLKHGGRLQYGLVLKRYWCDTGRLLRFWREEFIK 635
HLKH GRLQ GL LK L FW+++F K
Sbjct: 315 HLKHFGRLQLGLFLKGAGLSLNEALTFWQKKFSK 348
>UniRef50_O42263 Cluster: Kinesin-related protein; n=2; Xenopus|Rep:
Kinesin-related protein - Xenopus laevis (African clawed
frog)
Length = 2954
Score = 36.3 bits (80), Expect = 0.71
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +2
Query: 14 IARELELFKMRFAVMRGERLEVFFKLNNLCYTTISEDEKNEVIQNLIESTPYSKIDNMK 190
+ ELEL + + GE LE+ KLN L + + E++EV+++++E+ K DN K
Sbjct: 1353 LVSELELLRAHVKSVEGENLEITKKLNGLEKEILGKSEESEVLKSMLENL---KEDNNK 1408
>UniRef50_Q8IHP8 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 2755
Score = 35.5 bits (78), Expect = 1.2
Identities = 21/70 (30%), Positives = 38/70 (54%)
Frame = -1
Query: 436 FQNNHYLNKIDVSLLTNKQVVHLVQFHTDDGKLWPNFVLNVFDTVLQELI*NLCEVYKRI 257
FQ+N LNK + N + + L +F T+D + + + N+ D + ++ I NL + R
Sbjct: 2140 FQSN-ILNKETYVQIDNHEDIQLEKFLTNDIETYKSLYRNISDNIFKKKIENLIMI--RS 2196
Query: 256 HIKKYFSCFN 227
++ KY +C N
Sbjct: 2197 NLYKYMNCLN 2206
>UniRef50_Q8I348 Cluster: Selenophosphate synthetase, putative; n=1;
Plasmodium falciparum 3D7|Rep: Selenophosphate
synthetase, putative - Plasmodium falciparum (isolate
3D7)
Length = 1193
Score = 35.5 bits (78), Expect = 1.2
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = -1
Query: 421 YLNKIDVSLLTNKQVVHLVQFHTDDGKLWPNFVLNVFDT--VLQELI*NLCEVYKRIHIK 248
Y+ K + NK + + Q++ D+ +PN + N +DT + Q + N +Y IH K
Sbjct: 395 YIYKSGYDIDNNKNINNFCQYYKDESLYFPNQITN-YDTYTICQNVYIN---IYNNIHKK 450
Query: 247 KYFSCFNQI*NFKEFNLIEFHI 182
KY S N + +N + HI
Sbjct: 451 KYISIDNVKDHIYIYNWKQKHI 472
>UniRef50_A2D807 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 967
Score = 35.1 bits (77), Expect = 1.6
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 47 FAVMRGERLEVFFKLNNLCY-TTISEDEKNEVIQNLIESTPYSKI 178
F+++RG+ L V FK+ NL + TIS + E+ N+I PY I
Sbjct: 751 FSIIRGDILLVVFKIENLIFMRTISITGQREIETNIIYKEPYENI 795
>UniRef50_Q55BM5 Cluster: DNA polymerase alpha primase subunit; n=1;
Dictyostelium discoideum AX4|Rep: DNA polymerase alpha
primase subunit - Dictyostelium discoideum AX4
Length = 470
Score = 33.9 bits (74), Expect = 3.8
Identities = 30/131 (22%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Frame = +1
Query: 232 SKKSIS*CGYAYIPHRDFISVLAAQYRTHLKQNLAKACHHLCEIEQD-ERLVCLLKGLHQ 408
+KK+I G AYI +F ++ ++ ++ L + I+++ L+ L +
Sbjct: 188 TKKAIIIKGEAYIYISNFKDMVIHTFKNYMNFALDRIKADKTRIKEEFPELIQFFTTLPK 247
Query: 409 SYSGNDYSETKAVIPI--ESLDSISTKSFPLCMRQLMNN*ELPIT*NMGAGYSMGLFLKG 582
+ G + + I E + +S SFP+CMR + ++ + G FLKG
Sbjct: 248 AGDGTNKPQLGNTKHIRKEDVSPLSKTSFPMCMRVMYDSLVETSSLKYEGRLQFGTFLKG 307
Query: 583 IGVTLEDS*GF 615
IG+ +++ F
Sbjct: 308 IGLPYDEAINF 318
>UniRef50_Q6C0Y6 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome F of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 2106
Score = 33.5 bits (73), Expect = 5.0
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
Frame = +2
Query: 38 KMRFAVMRGERLEVFFKLNNLCYTTISEDEKNEVIQNLIESTPYSKIDNMKFYKVKFFEV 217
K F+++ E +VF Y + ++EK E + L+ES P ++++ K +
Sbjct: 976 KPHFSIV--ELFQVFSASEEFKYVGVRQEEKLE-LGKLLESAPIPVRESVEDSTAKINVL 1032
Query: 218 LDLVKAR---KVFLNVDTLIYLTEISYQFLQHSIEHI*NKIWPKLAIICVKLNKM 373
L +R + F V +IY+T+ + + + E K W +LA I + + KM
Sbjct: 1033 LQAFISRLSLEGFALVSDMIYVTQSAQRLFRAIYEFCLRKKWARLARITLDVCKM 1087
>UniRef50_A3J2V7 Cluster: Putative uncharacterized protein; n=1;
Flavobacteria bacterium BAL38|Rep: Putative
uncharacterized protein - Flavobacteria bacterium BAL38
Length = 157
Score = 33.1 bits (72), Expect = 6.6
Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 113 ISEDEKNEVIQNLIESTPYSKIDNMKFYKVKFFEVLDL-VKARKVFLNVDTLIYLTEISY 289
I +DEKN+VI LIE+ + I N FE +D+ V F D LI + I Y
Sbjct: 64 IFDDEKNDVIWTLIENK--TTIINSNKQTTSLFEQVDITVFLLPEFKKADYLIKIENIDY 121
Query: 290 QFLQHSI 310
F SI
Sbjct: 122 GFESESI 128
>UniRef50_A0BQS3 Cluster: Chromosome undetermined scaffold_121,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_121,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 820
Score = 33.1 bits (72), Expect = 6.6
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = +1
Query: 280 DFI-SVLAAQYRTHLKQNLAKACHHLCEIEQDERLVCLLKGLHQSYSGNDYSETKAVIPI 456
DFI SVL ++ Q + L + Q E+ +C+ K H N + IPI
Sbjct: 304 DFILSVLKLDSENYIFQEILLISDQLIPLNQSEQSICIKKEAHYFIISNLFYR----IPI 359
Query: 457 ESLDSISTKSFPLCMRQLMNN*ELPI 534
LD + + C++Q+ N +PI
Sbjct: 360 HHLDQLFLQELLYCLKQI-NGTYIPI 384
>UniRef50_Q7RN33 Cluster: Putative uncharacterized protein PY01992;
n=1; Plasmodium yoelii yoelii|Rep: Putative
uncharacterized protein PY01992 - Plasmodium yoelii
yoelii
Length = 502
Score = 32.7 bits (71), Expect = 8.7
Identities = 15/60 (25%), Positives = 35/60 (58%)
Frame = +2
Query: 86 KLNNLCYTTISEDEKNEVIQNLIESTPYSKIDNMKFYKVKFFEVLDLVKARKVFLNVDTL 265
KLNN + + E E NE++ N+++ +I+N K ++ + + ++K + V+ ++T+
Sbjct: 13 KLNNKSFISSDELENNEILSNIMKDIINKQINNYKHVSLEVYNI-SVLKNKGVYDVIETV 71
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,388,799
Number of Sequences: 1657284
Number of extensions: 12789654
Number of successful extensions: 33339
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 32011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33280
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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