Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0104.Seq
(432 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9GZH5 Cluster: Proteasome regulatory particle, non-atp... 99 2e-20
UniRef50_UPI0000E465E2 Cluster: PREDICTED: similar to MGC83233 p... 99 5e-20
UniRef50_Q13041 Cluster: P67; n=14; Coelomata|Rep: P67 - Homo sa... 97 2e-19
UniRef50_Q13200 Cluster: 26S proteasome non-ATPase regulatory su... 97 2e-19
UniRef50_P87048 Cluster: 26S proteasome regulatory subunit rpn1;... 96 2e-19
UniRef50_Q5KAX5 Cluster: Endopeptidase, putative; n=1; Filobasid... 95 7e-19
UniRef50_UPI0000D56C55 Cluster: PREDICTED: similar to proteasome... 94 1e-18
UniRef50_UPI0000DB6C86 Cluster: PREDICTED: similar to proteasome... 90 2e-17
UniRef50_Q4PAF8 Cluster: Putative uncharacterized protein; n=1; ... 88 6e-17
UniRef50_Q6BP56 Cluster: Similar to CA1252|CaRPN1 Candida albica... 87 1e-16
UniRef50_UPI00015B44CD Cluster: PREDICTED: similar to proteasome... 85 5e-16
UniRef50_Q6CFX0 Cluster: Similar to sp|P38764 Saccharomyces cere... 84 1e-15
UniRef50_O49456 Cluster: Putative uncharacterized protein F20O9.... 79 3e-14
UniRef50_P38764 Cluster: 26S proteasome regulatory subunit RPN1;... 79 3e-14
UniRef50_Q6FPV6 Cluster: 26S proteasome regulatory subunit RPN1;... 78 7e-14
UniRef50_Q54BC6 Cluster: 26S proteasome regulatory subunit S2; n... 77 1e-13
UniRef50_Q5CPW2 Cluster: Proteasome regulatory subunit S2; n=2; ... 75 5e-13
UniRef50_Q4N7W1 Cluster: 26S proteasome regulatory subunit 2, pu... 75 6e-13
UniRef50_A2WYR0 Cluster: Putative uncharacterized protein; n=1; ... 74 1e-12
UniRef50_A7AS27 Cluster: Proteasome 26S regulatory subunit, puta... 73 2e-12
UniRef50_A0EBG0 Cluster: Chromosome undetermined scaffold_88, wh... 72 6e-12
UniRef50_Q8WRU8 Cluster: Proteasome regulatory non-ATP-ase subun... 69 6e-11
UniRef50_A5KBK8 Cluster: 26S proteasome regulatory subunit, puta... 68 1e-10
UniRef50_A2EPF2 Cluster: Proteasome/cyclosome repeat family prot... 66 4e-10
UniRef50_O61123 Cluster: 19S cap proteasome S2 subunit; n=2; Ent... 57 1e-07
UniRef50_Q7QSS0 Cluster: GLP_714_8871_5173; n=1; Giardia lamblia... 52 7e-06
UniRef50_Q8SS65 Cluster: 26S PROTEASOME REGULATORY SUBUNIT 4; n=... 46 3e-04
UniRef50_A0YLC8 Cluster: Predicted signal transduction protein c... 36 0.48
UniRef50_A3J8Z3 Cluster: Putative uncharacterized protein; n=1; ... 33 2.6
UniRef50_Q12913 Cluster: Receptor-type tyrosine-protein phosphat... 33 2.6
UniRef50_A7D0D1 Cluster: KH, type 1, domain protein; n=6; Euryar... 33 3.4
UniRef50_UPI0001553417 Cluster: PREDICTED: hypothetical protein;... 32 4.5
UniRef50_UPI0000DC08DD Cluster: zinc finger protein 296; n=1; Ra... 32 4.5
UniRef50_Q6CYE3 Cluster: Similar to sp|P53073 Saccharomyces cere... 32 4.5
UniRef50_Q53MC3 Cluster: Similar to ribulose bisphosphate carbox... 32 5.9
UniRef50_Q8SSH5 Cluster: 26S PROTEASOME REGULATORY SUBUNIT 2; n=... 31 7.8
>UniRef50_Q9GZH5 Cluster: Proteasome regulatory particle,
non-atpase-like protein 1; n=2; Caenorhabditis|Rep:
Proteasome regulatory particle, non-atpase-like protein
1 - Caenorhabditis elegans
Length = 981
Score = 99 bits (238), Expect = 2e-20
Identities = 44/59 (74%), Positives = 54/59 (91%)
Frame = +3
Query: 255 GEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNAR 431
GEP +RRAVPLA++L SVSNPQL++++ L+K+SHDSD D A+NAIFAMGLVGAGTNNAR
Sbjct: 741 GEPVIRRAVPLALSLLSVSNPQLNILETLSKFSHDSDADTAHNAIFAMGLVGAGTNNAR 799
Score = 41.1 bits (92), Expect = 0.010
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +1
Query: 148 LSSVQAVATLGVAVIALAEETGAEMCTRIFGQLGR*G 258
LSS QAVA LG+ +IA+ ++ G++M R+FG L R G
Sbjct: 705 LSSQQAVAVLGIGLIAMGDDIGSQMALRMFGHLIRYG 741
>UniRef50_UPI0000E465E2 Cluster: PREDICTED: similar to MGC83233
protein, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to MGC83233 protein,
partial - Strongylocentrotus purpuratus
Length = 418
Score = 98.7 bits (235), Expect = 5e-20
Identities = 42/59 (71%), Positives = 53/59 (89%)
Frame = +3
Query: 255 GEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNAR 431
GEP +RR+VPL +AL SVSNPQL ++D L+K+SHD DN+VA+NAI+AMG+VGAGTNNAR
Sbjct: 252 GEPVIRRSVPLGLALLSVSNPQLQILDTLSKFSHDPDNEVAHNAIYAMGIVGAGTNNAR 310
>UniRef50_Q13041 Cluster: P67; n=14; Coelomata|Rep: P67 - Homo
sapiens (Human)
Length = 591
Score = 96.7 bits (230), Expect = 2e-19
Identities = 41/59 (69%), Positives = 55/59 (93%)
Frame = +3
Query: 255 GEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNAR 431
GEP +RRAVPLA+AL SVSNP+L+++D L+K+SHD+D +V+YN+IFAMG+VG+GTNNAR
Sbjct: 364 GEPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPEVSYNSIFAMGMVGSGTNNAR 422
>UniRef50_Q13200 Cluster: 26S proteasome non-ATPase regulatory
subunit 2; n=48; Euteleostomi|Rep: 26S proteasome
non-ATPase regulatory subunit 2 - Homo sapiens (Human)
Length = 908
Score = 96.7 bits (230), Expect = 2e-19
Identities = 41/59 (69%), Positives = 55/59 (93%)
Frame = +3
Query: 255 GEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNAR 431
GEP +RRAVPLA+AL SVSNP+L+++D L+K+SHD+D +V+YN+IFAMG+VG+GTNNAR
Sbjct: 682 GEPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPEVSYNSIFAMGMVGSGTNNAR 740
Score = 41.1 bits (92), Expect = 0.010
Identities = 20/33 (60%), Positives = 23/33 (69%)
Frame = +1
Query: 160 QAVATLGVAVIALAEETGAEMCTRIFGQLGR*G 258
Q VA LG+A+IA+ EE GAEM R FG L R G
Sbjct: 650 QGVAVLGIALIAMGEEIGAEMALRTFGHLLRYG 682
>UniRef50_P87048 Cluster: 26S proteasome regulatory subunit rpn1;
n=23; cellular organisms|Rep: 26S proteasome regulatory
subunit rpn1 - Schizosaccharomyces pombe (Fission yeast)
Length = 891
Score = 96.3 bits (229), Expect = 2e-19
Identities = 41/59 (69%), Positives = 52/59 (88%)
Frame = +3
Query: 255 GEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNAR 431
GEP++R+A+PLA+ L S SNPQ+ + D L++YSHD+D DVAYNAIFAMGLVGAGT+NAR
Sbjct: 663 GEPSIRKAIPLALGLLSASNPQMRIFDTLSRYSHDNDLDVAYNAIFAMGLVGAGTSNAR 721
Score = 33.9 bits (74), Expect = 1.5
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 151 SSVQAVATLGVAVIALAEETGAEMCTRIFGQL 246
+++Q A LGVA IA+ E+ GAEM R F +
Sbjct: 628 TTIQTFAALGVATIAMGEDIGAEMVLRHFDHM 659
>UniRef50_Q5KAX5 Cluster: Endopeptidase, putative; n=1;
Filobasidiella neoformans|Rep: Endopeptidase, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1003
Score = 94.7 bits (225), Expect = 7e-19
Identities = 42/59 (71%), Positives = 50/59 (84%)
Frame = +3
Query: 255 GEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNAR 431
G+P +R++VPLA+ L S SNPQLS++D L+KYSHDSD DVA NAI AMG VGAGTNNAR
Sbjct: 773 GDPVIRKSVPLALGLISASNPQLSILDTLSKYSHDSDLDVAINAILAMGFVGAGTNNAR 831
Score = 36.7 bits (81), Expect = 0.21
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +1
Query: 160 QAVATLGVAVIALAEETGAEMCTRIFGQL 246
QA ATLG+A+IA+ E+ GAEM R F L
Sbjct: 741 QAFATLGIALIAMGEDVGAEMALRQFQHL 769
>UniRef50_UPI0000D56C55 Cluster: PREDICTED: similar to proteasome
(prosome, macropain) 26S subunit, non-ATPase, 2; n=1;
Tribolium castaneum|Rep: PREDICTED: similar to
proteasome (prosome, macropain) 26S subunit, non-ATPase,
2 - Tribolium castaneum
Length = 870
Score = 93.9 bits (223), Expect = 1e-18
Identities = 44/59 (74%), Positives = 52/59 (88%)
Frame = +3
Query: 255 GEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNAR 431
GEP+VR+AVPLAIAL SVS+PQ ++I+VL KYSHD D+DVA NAIF +G VGAGTNNAR
Sbjct: 648 GEPSVRKAVPLAIALTSVSDPQPTIINVLTKYSHDIDDDVACNAIFGLGYVGAGTNNAR 706
Score = 38.3 bits (85), Expect = 0.068
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +1
Query: 160 QAVATLGVAVIALAEETGAEMCTRIFGQLGR*G 258
+A+A L VA I+ EE G EM RIFGQ+ R G
Sbjct: 616 KAIAVLAVAAISKGEELGTEMIQRIFGQISRYG 648
>UniRef50_UPI0000DB6C86 Cluster: PREDICTED: similar to proteasome
(prosome, macropain) 26S subunit, non-ATPase, 2; n=1;
Apis mellifera|Rep: PREDICTED: similar to proteasome
(prosome, macropain) 26S subunit, non-ATPase, 2 - Apis
mellifera
Length = 871
Score = 89.8 bits (213), Expect = 2e-17
Identities = 42/62 (67%), Positives = 52/62 (83%)
Frame = +3
Query: 246 G*VGEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNN 425
G G RRA+PLA+ L S+SNP L+V+DVLNKYSHD+D++VA +AIFA+GLVGAGTNN
Sbjct: 643 GRYGSIYARRAMPLALGLSSLSNPDLAVLDVLNKYSHDNDSEVANSAIFALGLVGAGTNN 702
Query: 426 AR 431
AR
Sbjct: 703 AR 704
Score = 38.3 bits (85), Expect = 0.068
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = +1
Query: 148 LSSVQAVATLGVAVIALAEETGAEMCTRIFGQLGR*GS 261
+ S QA+ATLGVA + L E G E +RIFGQ+GR GS
Sbjct: 613 IGSSQAIATLGVAAVGLGE--GKEN-SRIFGQIGRYGS 647
>UniRef50_Q4PAF8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 946
Score = 88.2 bits (209), Expect = 6e-17
Identities = 42/59 (71%), Positives = 47/59 (79%)
Frame = +3
Query: 255 GEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNAR 431
GE RRAVPLA+AL SNP + V+D L+KYSHDSD DVA NAI AMGLVGAG+NNAR
Sbjct: 716 GEATTRRAVPLALALLHPSNPSMPVLDTLSKYSHDSDLDVAINAILAMGLVGAGSNNAR 774
Score = 33.9 bits (74), Expect = 1.5
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 160 QAVATLGVAVIALAEETGAEMCTRIFGQL 246
QA A +G+A++ + EE GAEM TR L
Sbjct: 684 QAFAVIGIALVTMGEEVGAEMATRHLSHL 712
>UniRef50_Q6BP56 Cluster: Similar to CA1252|CaRPN1 Candida albicans
CaRPN1 26S proteasome regulatory subunit; n=2;
Saccharomycetaceae|Rep: Similar to CA1252|CaRPN1 Candida
albicans CaRPN1 26S proteasome regulatory subunit -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 967
Score = 87.4 bits (207), Expect = 1e-16
Identities = 40/59 (67%), Positives = 47/59 (79%)
Frame = +3
Query: 255 GEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNAR 431
G P +RRAVPLA+ L S S PQ+ V D L++YSHD D +VA NAI+AMGLVGAGTNNAR
Sbjct: 732 GNPLIRRAVPLAMGLVSTSYPQMKVFDTLSRYSHDPDLEVAQNAIYAMGLVGAGTNNAR 790
>UniRef50_UPI00015B44CD Cluster: PREDICTED: similar to proteasome
26S non-ATPase subunit 2; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to proteasome 26S non-ATPase subunit
2 - Nasonia vitripennis
Length = 897
Score = 85.4 bits (202), Expect = 5e-16
Identities = 40/62 (64%), Positives = 47/62 (75%)
Frame = +3
Query: 246 G*VGEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNN 425
G G P R AVPL AL +SNP ++DVLNKYSHD+D +VA NAIFA+GL+GAGTNN
Sbjct: 670 GRYGAPPARTAVPLCFALSYLSNPDPGLLDVLNKYSHDNDPNVALNAIFALGLIGAGTNN 729
Query: 426 AR 431
AR
Sbjct: 730 AR 731
Score = 33.9 bits (74), Expect = 1.5
Identities = 18/38 (47%), Positives = 28/38 (73%)
Frame = +1
Query: 148 LSSVQAVATLGVAVIALAEETGAEMCTRIFGQLGR*GS 261
+S Q +A+LGVA++ L++ G E +RIFGQ+GR G+
Sbjct: 640 ISLTQPIASLGVAIVGLSD--GKEN-SRIFGQIGRYGA 674
>UniRef50_Q6CFX0 Cluster: Similar to sp|P38764 Saccharomyces
cerevisiae 26S proteasome regulatory subunit RPN1; n=1;
Yarrowia lipolytica|Rep: Similar to sp|P38764
Saccharomyces cerevisiae 26S proteasome regulatory
subunit RPN1 - Yarrowia lipolytica (Candida lipolytica)
Length = 979
Score = 83.8 bits (198), Expect = 1e-15
Identities = 38/59 (64%), Positives = 48/59 (81%)
Frame = +3
Query: 255 GEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNAR 431
G+ V+RAVPLA+ L S SN Q+ V D L++YSHD+D +VA N+IF+MGLVGAGTNNAR
Sbjct: 750 GDAQVKRAVPLAMGLVSASNAQMRVFDTLSRYSHDADMEVALNSIFSMGLVGAGTNNAR 808
>UniRef50_O49456 Cluster: Putative uncharacterized protein
F20O9.150; n=1; Arabidopsis thaliana|Rep: Putative
uncharacterized protein F20O9.150 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 1103
Score = 79.4 bits (187), Expect = 3e-14
Identities = 34/59 (57%), Positives = 49/59 (83%)
Frame = +3
Query: 255 GEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNAR 431
GE +RRAVPLA+ L +SNP+++V+D L++ SHD+D++VA AI ++GL+GAGTNNAR
Sbjct: 736 GEQNIRRAVPLALGLLCISNPKVTVMDTLSRLSHDTDSEVAMAAIISLGLIGAGTNNAR 794
>UniRef50_P38764 Cluster: 26S proteasome regulatory subunit RPN1;
n=8; Saccharomycetales|Rep: 26S proteasome regulatory
subunit RPN1 - Saccharomyces cerevisiae (Baker's yeast)
Length = 993
Score = 79.4 bits (187), Expect = 3e-14
Identities = 35/59 (59%), Positives = 46/59 (77%)
Frame = +3
Query: 255 GEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNAR 431
G +RR VPLA+ + SVS+PQ+ V D L ++SHD+D +V+ N+IFAMGL GAGTNNAR
Sbjct: 768 GNEHIRRMVPLAMGIVSVSDPQMKVFDTLTRFSHDADLEVSMNSIFAMGLCGAGTNNAR 826
Score = 33.9 bits (74), Expect = 1.5
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +1
Query: 163 AVATLGVAVIALAEETGAEMCTRIFGQL 246
A A LG+A+IAL E+ G EM R FG L
Sbjct: 737 AYAVLGIALIALGEDIGKEMSLRHFGHL 764
>UniRef50_Q6FPV6 Cluster: 26S proteasome regulatory subunit RPN1;
n=2; Saccharomycetales|Rep: 26S proteasome regulatory
subunit RPN1 - Candida glabrata (Yeast) (Torulopsis
glabrata)
Length = 983
Score = 78.2 bits (184), Expect = 7e-14
Identities = 35/59 (59%), Positives = 44/59 (74%)
Frame = +3
Query: 255 GEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNAR 431
G +RR VPLA+ L SV++PQ+ V D L ++SHD D DV+ N+IFAMGL G GTNNAR
Sbjct: 758 GNEHIRRMVPLAMGLVSVADPQMKVFDTLTRFSHDPDLDVSMNSIFAMGLCGVGTNNAR 816
Score = 31.9 bits (69), Expect = 5.9
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 163 AVATLGVAVIALAEETGAEMCTRIFGQL 246
A A +G+A+I + EE G EM R FG L
Sbjct: 727 AYAVIGIALITMGEEIGKEMSLRHFGHL 754
>UniRef50_Q54BC6 Cluster: 26S proteasome regulatory subunit S2; n=1;
Dictyostelium discoideum AX4|Rep: 26S proteasome
regulatory subunit S2 - Dictyostelium discoideum AX4
Length = 893
Score = 77.4 bits (182), Expect = 1e-13
Identities = 32/59 (54%), Positives = 48/59 (81%)
Frame = +3
Query: 255 GEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNAR 431
G ++RA+PLA+ L S SNP+++++D+L+K SHD+D +VA AI ++GL+GAGTNNAR
Sbjct: 659 GNVHIKRAIPLALGLLSPSNPRIAIMDILSKLSHDNDPEVAQGAILSLGLIGAGTNNAR 717
Score = 33.5 bits (73), Expect = 1.9
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +1
Query: 166 VATLGVAVIALAEETGAEMCTRIFGQL 246
+A L +A+IA+ EE G++MC R+F L
Sbjct: 629 LAVLSIALIAMGEELGSDMCLRMFDHL 655
>UniRef50_Q5CPW2 Cluster: Proteasome regulatory subunit S2; n=2;
Cryptosporidium|Rep: Proteasome regulatory subunit S2 -
Cryptosporidium parvum Iowa II
Length = 1045
Score = 75.4 bits (177), Expect = 5e-13
Identities = 32/55 (58%), Positives = 45/55 (81%)
Frame = +3
Query: 267 VRRAVPLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNAR 431
+RRAVP+++A S+ NP+ +ID ++K +HDSD DVA NAIFA+GL+ AGTNN+R
Sbjct: 815 IRRAVPISLAALSIGNPKPVLIDTISKLTHDSDPDVALNAIFALGLISAGTNNSR 869
>UniRef50_Q4N7W1 Cluster: 26S proteasome regulatory subunit 2,
putative; n=2; Theileria|Rep: 26S proteasome regulatory
subunit 2, putative - Theileria parva
Length = 1123
Score = 74.9 bits (176), Expect = 6e-13
Identities = 35/54 (64%), Positives = 43/54 (79%)
Frame = +3
Query: 270 RRAVPLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNAR 431
RRAVPLAIAL +VSNP +++ L+K SHDSD DV+ AI +GLVGAGTNN+R
Sbjct: 903 RRAVPLAIALVNVSNPAPAIVSALSKLSHDSDKDVSLCAILGLGLVGAGTNNSR 956
>UniRef50_A2WYR0 Cluster: Putative uncharacterized protein; n=1; Oryza
sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 1103
Score = 73.7 bits (173), Expect = 1e-12
Identities = 31/58 (53%), Positives = 46/58 (79%)
Frame = +3
Query: 255 GEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNA 428
GE +RRAVPLA+ + +SNP+++V+D L++ HD+D DV+ AI ++GL+GAGTNNA
Sbjct: 839 GEQNIRRAVPLALGILCISNPKVNVMDTLSRLCHDADADVSMAAIISLGLIGAGTNNA 896
Score = 33.5 bits (73), Expect = 1.9
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +1
Query: 160 QAVATLGVAVIALAEETGAEMCTR 231
Q A LG+A+IA+AEE GAEM R
Sbjct: 807 QGPAVLGIALIAMAEELGAEMAVR 830
>UniRef50_A7AS27 Cluster: Proteasome 26S regulatory subunit,
putative; n=1; Babesia bovis|Rep: Proteasome 26S
regulatory subunit, putative - Babesia bovis
Length = 1008
Score = 73.3 bits (172), Expect = 2e-12
Identities = 34/59 (57%), Positives = 42/59 (71%)
Frame = +3
Query: 255 GEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNAR 431
G RRA PLA+A+ SNP VID+L+K +HD+D V NAIF MG+VGAGTNN+R
Sbjct: 780 GSLCERRAAPLALAIAYASNPCPQVIDILSKLTHDADYQVTINAIFGMGIVGAGTNNSR 838
>UniRef50_A0EBG0 Cluster: Chromosome undetermined scaffold_88, whole
genome shotgun sequence; n=3; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_88, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 887
Score = 71.7 bits (168), Expect = 6e-12
Identities = 29/55 (52%), Positives = 45/55 (81%)
Frame = +3
Query: 267 VRRAVPLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNAR 431
V+RA+PLA+AL ++SNP++ +D+L K +HD D +++Y A +MGL+GAGTNN+R
Sbjct: 650 VKRAIPLAVALINISNPKIQPMDLLLKLAHDRDQELSYRATLSMGLLGAGTNNSR 704
Score = 33.1 bits (72), Expect = 2.6
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +1
Query: 157 VQAVATLGVAVIALAEETGAEMCTRIF 237
+Q VA LG+A+IA +E+ G+EM RIF
Sbjct: 613 LQQVAILGIALIASSEDIGSEMVYRIF 639
>UniRef50_Q8WRU8 Cluster: Proteasome regulatory non-ATP-ase subunit
1; n=9; Trypanosomatidae|Rep: Proteasome regulatory
non-ATP-ase subunit 1 - Trypanosoma brucei
Length = 911
Score = 68.5 bits (160), Expect = 6e-11
Identities = 37/72 (51%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Frame = +3
Query: 222 VHPHLRTTG*VGEPAV--RRAVPLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYNAIFA 395
+H L T GE + R A+PLA AL S SNP + V++ LN+ HDSD A NAI A
Sbjct: 669 IHTLLVDTVSKGEANISGRHAIPLAYALLSASNPGMQVVETLNRLLHDSDMLTAINAIVA 728
Query: 396 MGLVGAGTNNAR 431
MG+V AG+NNAR
Sbjct: 729 MGIVAAGSNNAR 740
>UniRef50_A5KBK8 Cluster: 26S proteasome regulatory subunit,
putative; n=5; Plasmodium|Rep: 26S proteasome regulatory
subunit, putative - Plasmodium vivax
Length = 1039
Score = 67.7 bits (158), Expect = 1e-10
Identities = 29/54 (53%), Positives = 43/54 (79%)
Frame = +3
Query: 270 RRAVPLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNAR 431
++AVPLA+AL S P+ +++D+L+K +HD D DVA +AI ++G VGAGTNN+R
Sbjct: 814 KKAVPLALALLFTSFPKPNIVDILSKLTHDQDADVALHAIMSLGFVGAGTNNSR 867
>UniRef50_A2EPF2 Cluster: Proteasome/cyclosome repeat family
protein; n=2; Trichomonas vaginalis G3|Rep:
Proteasome/cyclosome repeat family protein - Trichomonas
vaginalis G3
Length = 850
Score = 65.7 bits (153), Expect = 4e-10
Identities = 30/59 (50%), Positives = 41/59 (69%)
Frame = +3
Query: 255 GEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNAR 431
G+P R+ VP+AIAL S+S P ++D L++ HD D +VA A A+GL+GAGTNN R
Sbjct: 620 GKPNARKMVPIAIALTSISQPLPELVDQLHRIGHDPDVNVARAACVALGLIGAGTNNTR 678
>UniRef50_O61123 Cluster: 19S cap proteasome S2 subunit; n=2;
Entamoeba histolytica|Rep: 19S cap proteasome S2 subunit
- Entamoeba histolytica
Length = 843
Score = 57.2 bits (132), Expect = 1e-07
Identities = 26/59 (44%), Positives = 39/59 (66%)
Frame = +3
Query: 255 GEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNAR 431
GEP+V+R VP A+AL S+ P++ +++ L + +H SD A NAI ++GL AGT R
Sbjct: 622 GEPSVKRYVPFALALTSIGKPKVGLLEQLTRLAHGSDLIAARNAILSIGLASAGTPATR 680
>UniRef50_Q7QSS0 Cluster: GLP_714_8871_5173; n=1; Giardia lamblia ATCC
50803|Rep: GLP_714_8871_5173 - Giardia lamblia ATCC 50803
Length = 1232
Score = 51.6 bits (118), Expect = 7e-06
Identities = 23/59 (38%), Positives = 38/59 (64%)
Frame = +3
Query: 255 GEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNAR 431
G +RA PLA+A+ ++S P + D+L + + SD ++ NAI A+GL+G G+ N+R
Sbjct: 992 GSSYAKRACPLALAVMNLSRPAPELTDMLFRMASQSDESLSINAIIALGLIGCGSCNSR 1050
>UniRef50_Q8SS65 Cluster: 26S PROTEASOME REGULATORY SUBUNIT 4; n=1;
Encephalitozoon cuniculi|Rep: 26S PROTEASOME REGULATORY
SUBUNIT 4 - Encephalitozoon cuniculi
Length = 795
Score = 46.0 bits (104), Expect = 3e-04
Identities = 20/55 (36%), Positives = 36/55 (65%)
Frame = +3
Query: 267 VRRAVPLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNAR 431
+R +PL ++ SNPQ++V+D+L K + + + + I ++GL+GAGT N+R
Sbjct: 586 LRSVLPLCYSILYPSNPQVNVLDMLEKSLNIGETNCIISTIVSLGLIGAGTLNSR 640
>UniRef50_A0YLC8 Cluster: Predicted signal transduction protein
containing Nacht domain; n=1; Lyngbya sp. PCC 8106|Rep:
Predicted signal transduction protein containing Nacht
domain - Lyngbya sp. PCC 8106
Length = 1044
Score = 35.5 bits (78), Expect = 0.48
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 288 AIALCSVSNPQLSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGT 419
A AL + N +V+D L + D D+DV++ A FA+G +G G+
Sbjct: 766 AEALGELGNSSQTVVDALLQALTDEDSDVSWRAAFALGQLGKGS 809
>UniRef50_A3J8Z3 Cluster: Putative uncharacterized protein; n=1;
Marinobacter sp. ELB17|Rep: Putative uncharacterized
protein - Marinobacter sp. ELB17
Length = 207
Score = 33.1 bits (72), Expect = 2.6
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 309 SNPQLSVIDVLNKYSHD-SDNDVAYNAIFAMGLVGAG 416
SNP L+V+D LN Y D SD +A NA+ + VG G
Sbjct: 91 SNPVLAVLDGLNDYDEDFSDAAIAGNAVKTLYKVGQG 127
>UniRef50_Q12913 Cluster: Receptor-type tyrosine-protein phosphatase
eta precursor; n=32; Mammalia|Rep: Receptor-type
tyrosine-protein phosphatase eta precursor - Homo
sapiens (Human)
Length = 1337
Score = 33.1 bits (72), Expect = 2.6
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = -3
Query: 349 YLLSTSMTESCGLDTEHRAMASGTARRTAGSPTYPV 242
YLL ++ T+ L TE AS T R AGSPT PV
Sbjct: 273 YLLQSNKTKGDPLGTEGGLDASNTERSRAGSPTAPV 308
>UniRef50_A7D0D1 Cluster: KH, type 1, domain protein; n=6;
Euryarchaeota|Rep: KH, type 1, domain protein -
Halorubrum lacusprofundi ATCC 49239
Length = 180
Score = 32.7 bits (71), Expect = 3.4
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 219 NVHPHLRTTG*VGEPAVRRAVPLAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYNA 386
NV + T G VG+P V A+ + P +V L + S++ D+DV++NA
Sbjct: 123 NVVVYGSTVGAVGQPEELEVVRRAVGMLLDGAPHGAVYSYLERMSNELDDDVSFNA 178
>UniRef50_UPI0001553417 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 167
Score = 32.3 bits (70), Expect = 4.5
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -2
Query: 299 QGDGER--HGAPHCRLPYLPSCPKMRVHISAP 210
+G ER H PHC L +LP P++ H+S P
Sbjct: 120 RGPPERTVHTPPHCALCHLPLSPQLLTHVSTP 151
>UniRef50_UPI0000DC08DD Cluster: zinc finger protein 296; n=1;
Rattus norvegicus|Rep: zinc finger protein 296 - Rattus
norvegicus
Length = 393
Score = 32.3 bits (70), Expect = 4.5
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +2
Query: 146 SCPR-CKPWRPLASRSSHW-PRKRAP 217
S PR C PW PL S+SS W P K+ P
Sbjct: 51 SAPRTCAPWMPLDSKSSDWQPTKKHP 76
>UniRef50_Q6CYE3 Cluster: Similar to sp|P53073 Saccharomyces
cerevisiae YGL231c singleton; n=1; Kluyveromyces
lactis|Rep: Similar to sp|P53073 Saccharomyces
cerevisiae YGL231c singleton - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 202
Score = 32.3 bits (70), Expect = 4.5
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +3
Query: 279 VPLAIALCSVSNPQLSVIDVLNKYSH--DSDNDVAYNAIFAM 398
+P+ A+ VSNP S++ V +K+ H + DNDV + AM
Sbjct: 114 IPIMTAVMLVSNPIKSILGVKSKFQHLINKDNDVTPPVVAAM 155
>UniRef50_Q53MC3 Cluster: Similar to ribulose bisphosphate
carboxylase/oxygenase activase b, chloroplastprecursor
(Rubisco activase b) (Ra b) (Putative uncharacterized
protein) (Os11g0707100 protein) (Expressed protein)
(Ribulose bisphosphate carboxylase/oxygenase activase b,
chloroplastprecursor (Rubisco activase b) (Ra
b)-related); n=2; Oryza sativa|Rep: Similar to ribulose
bisphosphate carboxylase/oxygenase activase b,
chloroplastprecursor (Rubisco activase b) (Ra b)
(Putative uncharacterized protein) (Os11g0707100
protein) (Expressed protein) (Ribulose bisphosphate
carboxylase/oxygenase activase b, chloroplastprecursor
(Rubisco activase b) (Ra b)-related) - Oryza sativa
subsp. japonica (Rice)
Length = 366
Score = 31.9 bits (69), Expect = 5.9
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = -2
Query: 347 FIEHVDDGELRVGHGAQGDGERHGAPHCRLPYLPSCPKMRVHISAPVSSANAMTATP 177
FI +D G HG Q DGER H P+ + P+ + P S++ T +P
Sbjct: 178 FINDLDAGRHDAVHGEQPDGERDADEHRGQPHQRAAPR---DVQPPSPSSSPATTSP 231
>UniRef50_Q8SSH5 Cluster: 26S PROTEASOME REGULATORY SUBUNIT 2; n=1;
Encephalitozoon cuniculi|Rep: 26S PROTEASOME REGULATORY
SUBUNIT 2 - Encephalitozoon cuniculi
Length = 786
Score = 31.5 bits (68), Expect = 7.8
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 285 LAIALCSVSNPQLSVIDVLNKYSHDSDNDVAYNAIFAMGLV 407
L++ V +L VI L Y +D D+DV A+ A+GLV
Sbjct: 501 LSLGSAFVGTGRLGVISTLLPYINDGDDDVKRAAVIAIGLV 541
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 288,083,828
Number of Sequences: 1657284
Number of extensions: 4303454
Number of successful extensions: 16507
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 15976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16502
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21075479950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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