Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0086.Seq
(529 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0B4G8 Cluster: Putative uncharacterized protein; n=1; ... 34 1.8
UniRef50_Q4DRX9 Cluster: Putative uncharacterized protein; n=1; ... 34 1.8
UniRef50_UPI0000D9E9AA Cluster: PREDICTED: hypothetical protein,... 34 2.3
UniRef50_Q640I9 Cluster: JmjC domain-containing histone demethyl... 33 3.1
UniRef50_UPI00005100F5 Cluster: hypothetical protein BlinB010026... 33 4.1
UniRef50_A1FSF5 Cluster: Transcriptional regulator, GntR family;... 33 4.1
UniRef50_UPI0000383643 Cluster: COG3948: Phage-related baseplate... 33 5.4
UniRef50_Q9PFY4 Cluster: Putative uncharacterized protein; n=4; ... 33 5.4
UniRef50_Q2QNU3 Cluster: NB-ARC domain containing protein; n=2; ... 33 5.4
UniRef50_Q019K2 Cluster: Chromosome 05 contig 1, DNA sequence; n... 33 5.4
UniRef50_UPI0000EBE39A Cluster: PREDICTED: similar to tripartite... 32 7.1
UniRef50_Q9N4M4 Cluster: Nuclear anchorage protein 1; n=4; Rhabd... 32 7.1
UniRef50_O75086 Cluster: MIFR-2; n=1; Homo sapiens|Rep: MIFR-2 -... 32 9.4
UniRef50_Q8NHM5 Cluster: JmjC domain-containing histone demethyl... 32 9.4
>UniRef50_Q0B4G8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia ambifaria AMMD|Rep: Putative
uncharacterized protein - Burkholderia cepacia (strain
ATCC 53795 / AMMD)
Length = 192
Score = 34.3 bits (75), Expect = 1.8
Identities = 25/85 (29%), Positives = 31/85 (36%), Gaps = 4/85 (4%)
Frame = -3
Query: 287 YGMLRLLPVDWTHSTAERVTLCLTWLTEN---RPVKCPTPRNAHRS-VVRSDRQTLALRG 120
Y R P + T R C + T R KCPT R + R R+ R
Sbjct: 17 YPTCRRYPTCRKYPTCRRYPRCRKYPTYRKCPRYRKCPTYRKCRKCRKCRKCRKCRKCRK 76
Query: 119 RRRGVSCRPAERCGRAASCRSCEFC 45
R+ CR +C R CR C C
Sbjct: 77 CRKCRKCRKCRKCRRCRRCRKCLSC 101
>UniRef50_Q4DRX9 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma cruzi|Rep: Putative uncharacterized protein -
Trypanosoma cruzi
Length = 1268
Score = 34.3 bits (75), Expect = 1.8
Identities = 34/97 (35%), Positives = 38/97 (39%), Gaps = 1/97 (1%)
Frame = -2
Query: 348 RGPKSPHVTSRD-NQVTNHSLLRNAKTFTRRLDAQYCRTRYAVSHMADGKQTG*VSDTAQ 172
RGP SR Q T HSL AK + RLD R ADGK T S TA
Sbjct: 1041 RGPTPTFEASRCIPQSTLHSLENFAKAYMPRLDTSGLRETERQGEAADGKDTQGGSSTAH 1100
Query: 171 RTPQRCAIRSTDPSFKRPAARRQLPAGRTVRARGIVP 61
+P S + AA R A +RG VP
Sbjct: 1101 LSPTTVKHVSLLEAAASAAASRS--ASGFGESRGAVP 1135
>UniRef50_UPI0000D9E9AA Cluster: PREDICTED: hypothetical protein,
partial; n=1; Macaca mulatta|Rep: PREDICTED:
hypothetical protein, partial - Macaca mulatta
Length = 198
Score = 33.9 bits (74), Expect = 2.3
Identities = 25/63 (39%), Positives = 30/63 (47%)
Frame = -3
Query: 197 PVKCPTPRNAHRSVVRSDRQTLALRGRRRGVSCRPAERCGRAASCRSCEFC*IRSLANRS 18
PV P+PR R R + R RRR S RPA RA S CE R+LA ++
Sbjct: 12 PVSAPSPRALRRRARRGRLGNVVPRWRRREPS-RPAPGAHRAVSVVICEL--ERALAQKT 68
Query: 17 GRS 9
G S
Sbjct: 69 GGS 71
>UniRef50_Q640I9 Cluster: JmjC domain-containing histone
demethylation protein 1B; n=5; Xenopus|Rep: JmjC
domain-containing histone demethylation protein 1B -
Xenopus laevis (African clawed frog)
Length = 1259
Score = 33.5 bits (73), Expect = 3.1
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = -3
Query: 209 TENRPVKCPTPRNAHRSVVRSDRQTLALRGRRRGVSCRPAERCGRAASCRSCEFC 45
++NR V P + A V+ + RRR CR E C R C C FC
Sbjct: 538 SKNRAVGRPKGKIASSPAVKLSANRTSAGARRRRTRCRKCEACLR-TECGECHFC 591
>UniRef50_UPI00005100F5 Cluster: hypothetical protein BlinB01002639;
n=1; Brevibacterium linens BL2|Rep: hypothetical protein
BlinB01002639 - Brevibacterium linens BL2
Length = 119
Score = 33.1 bits (72), Expect = 4.1
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -3
Query: 302 RITVYYGMLRLLPVD-WTHSTAERVTLCLTWLTENRPVKCPTPRNAH 165
R+T G + LLP+D W H E L TWL E+ +K P +H
Sbjct: 56 RLTAEDGTVLLLPLDDWRHRMEEVPGLVRTWLGEHSDLKGCKPSKSH 102
>UniRef50_A1FSF5 Cluster: Transcriptional regulator, GntR family;
n=9; Gammaproteobacteria|Rep: Transcriptional regulator,
GntR family - Stenotrophomonas maltophilia R551-3
Length = 266
Score = 33.1 bits (72), Expect = 4.1
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 52 SHERHDAARPHRSAGR-QLTPRRRPLKARVCRSDRTTLRCALRGVGHLTG 198
SHER D ++PHR+ GR + P R L R R +CA G H TG
Sbjct: 67 SHERPDTSQPHRTRGRCRFDPDRAGLAGR-ANLPRFNRQCA--GRDHFTG 113
>UniRef50_UPI0000383643 Cluster: COG3948: Phage-related baseplate
assembly protein; n=1; Magnetospirillum magnetotacticum
MS-1|Rep: COG3948: Phage-related baseplate assembly
protein - Magnetospirillum magnetotacticum MS-1
Length = 260
Score = 32.7 bits (71), Expect = 5.4
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +1
Query: 4 RADLPERFAKER--IQQNSHERHDAARPHRSAGRQLTPRRRPLKARVCRSDRTTLRCALR 177
RA + ER A+ER Q+ H RHD R R A R+ P+ RV + ALR
Sbjct: 11 RAPVRERDARERRDAQRARHARHDVDRQARRAAREYLLAAAPVDERVAALEPHDAPAALR 70
>UniRef50_Q9PFY4 Cluster: Putative uncharacterized protein; n=4;
Xylella fastidiosa|Rep: Putative uncharacterized protein
- Xylella fastidiosa
Length = 395
Score = 32.7 bits (71), Expect = 5.4
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = -3
Query: 266 PVDWTHSTAERVTLCLTWLTENRPVKCPTPRNAHRSVVRSDRQTLALRGRRRGVSCR 96
PV WT + T WLT+ ++ PT HR + +S R TL G S R
Sbjct: 4 PVAWTFAPGGEYTETFEWLTD--VLQAPTGGTQHRRLRQSPRATLRFSALESGASRR 58
>UniRef50_Q2QNU3 Cluster: NB-ARC domain containing protein; n=2;
Oryza sativa (japonica cultivar-group)|Rep: NB-ARC
domain containing protein - Oryza sativa subsp. japonica
(Rice)
Length = 734
Score = 32.7 bits (71), Expect = 5.4
Identities = 15/45 (33%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = -2
Query: 231 YAVSHMADGKQTG*VSDTAQRTP-QRCAIRSTDPSFKRPAARRQL 100
+ ++++DG+QTG + TAQ+ +R ++ +++ S+ P AR QL
Sbjct: 427 FVTTYLSDGQQTGKHTCTAQKKKIRRLSLHNSNKSYASPEAREQL 471
>UniRef50_Q019K2 Cluster: Chromosome 05 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 05 contig 1, DNA
sequence - Ostreococcus tauri
Length = 289
Score = 32.7 bits (71), Expect = 5.4
Identities = 22/57 (38%), Positives = 28/57 (49%)
Frame = +1
Query: 4 RADLPERFAKERIQQNSHERHDAARPHRSAGRQLTPRRRPLKARVCRSDRTTLRCAL 174
R LP A R + + RH AR R + R+ + RRRP + V RS T CAL
Sbjct: 204 RIKLPNPRACRRARARAVARHRVARCRRRSRRRRS-RRRPSRRGVARSGGGTHECAL 259
>UniRef50_UPI0000EBE39A Cluster: PREDICTED: similar to tripartite
motif protein TRIM4 isoform beta isoform 1, partial;
n=1; Bos taurus|Rep: PREDICTED: similar to tripartite
motif protein TRIM4 isoform beta isoform 1, partial -
Bos taurus
Length = 280
Score = 32.3 bits (70), Expect = 7.1
Identities = 21/57 (36%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
Frame = -3
Query: 236 RVTLCLTWLTENRPVKCPTPRNAHRSVVRSDRQTLAL---RGRRRGVSCRPAERCGR 75
R LC TW PV+CP R LA R RRR + PA CGR
Sbjct: 33 RGCLCRTWAPGGSPVRCPECRRPSAPASMRPNWALARLTERMRRRRLGPVPAGLCGR 89
>UniRef50_Q9N4M4 Cluster: Nuclear anchorage protein 1; n=4;
Rhabditida|Rep: Nuclear anchorage protein 1 -
Caenorhabditis elegans
Length = 8545
Score = 32.3 bits (70), Expect = 7.1
Identities = 22/75 (29%), Positives = 32/75 (42%)
Frame = -3
Query: 353 EAAAPRVRTLRPATTRLRITVYYGMLRLLPVDWTHSTAERVTLCLTWLTENRPVKCPTPR 174
E PR+ TLR TT + Y + + W TA+ VTL L W+ E + P+
Sbjct: 505 EENEPRISTLRILTTHYILLQYLQHIDEKIILWR--TADSVTLLLRWIKEYTQLNAENPQ 562
Query: 173 NAHRSVVRSDRQTLA 129
S + T+A
Sbjct: 563 AKCASYINKITLTMA 577
>UniRef50_O75086 Cluster: MIFR-2; n=1; Homo sapiens|Rep: MIFR-2 -
Homo sapiens (Human)
Length = 386
Score = 31.9 bits (69), Expect = 9.4
Identities = 24/90 (26%), Positives = 37/90 (41%)
Frame = -3
Query: 356 AEAAAPRVRTLRPATTRLRITVYYGMLRLLPVDWTHSTAERVTLCLTWLTENRPVKCPTP 177
A AAP +R R A R+R+ G+LR P + +++ L L + P P
Sbjct: 268 AVGAAPALRMPRQAV-RVRVLGAEGLLRRSPAAHEEALPQQLRLLL---------RIPLP 317
Query: 176 RNAHRSVVRSDRQTLALRGRRRGVSCRPAE 87
H D+ RG+ R + RP +
Sbjct: 318 HGGHHPTAPQDQNQAGARGQERDLPLRPED 347
>UniRef50_Q8NHM5 Cluster: JmjC domain-containing histone
demethylation protein 1B; n=56; Euteleostomi|Rep: JmjC
domain-containing histone demethylation protein 1B -
Homo sapiens (Human)
Length = 1336
Score = 31.9 bits (69), Expect = 9.4
Identities = 18/54 (33%), Positives = 21/54 (38%)
Frame = -3
Query: 206 ENRPVKCPTPRNAHRSVVRSDRQTLALRGRRRGVSCRPAERCGRAASCRSCEFC 45
+NR V P + S V+ RRR CR E C R C C FC
Sbjct: 578 KNRAVGRPKGKLGPASAVKLAANRTTAGARRRRTRCRKCEACLR-TECGECHFC 630
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 527,456,205
Number of Sequences: 1657284
Number of extensions: 10723768
Number of successful extensions: 33073
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 31509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33044
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33455602480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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