Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0069.Seq
         (770 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54KQ4 Cluster: Putative uncharacterized protein; n=1; ...    33   5.9  
UniRef50_Q9U0N7 Cluster: Cation-transporting ATPase; n=6; Eukary...    33   7.9  
UniRef50_Q8ILR9 Cluster: Putative uncharacterized protein; n=1; ...    33   7.9  

>UniRef50_Q54KQ4 Cluster: Putative uncharacterized protein; n=1;
            Dictyostelium discoideum AX4|Rep: Putative
            uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1872

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +2

Query: 566  INCNECCD*TTRTI*GHSQTHVHCIIY*RFKYFKDFVFT 682
            INC ECCD T RT    S    HCI       F++ +F+
Sbjct: 1326 INCRECCDKTQRTQNLESPVCPHCIAMDNLTLFREKLFS 1364


>UniRef50_Q9U0N7 Cluster: Cation-transporting ATPase; n=6;
           Eukaryota|Rep: Cation-transporting ATPase - Plasmodium
           falciparum
          Length = 1903

 Score = 33.1 bits (72), Expect = 7.9
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -2

Query: 226 IKKSKWSMLISQSRLH*CFKFNLFFFVKLGLIWDSDLTSQGLH 98
           +KK K    I+ SR+  C K  +FFF K G + D  +   G+H
Sbjct: 458 LKKEKDICCIAPSRIPICGKIRVFFFDKTGTLTDHKIEFSGVH 500


>UniRef50_Q8ILR9 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 4662

 Score = 33.1 bits (72), Expect = 7.9
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +2

Query: 248 KSVIKLSTIMCIHIRIYNTYKK-YIVNRKYRRLDGLCNKRI*IRFNIFYDFNKF 406
           K + K +  + IH   +N YKK Y    K   L  LC+      +N+FY FN++
Sbjct: 273 KFINKFNKYINIHHHYHNVYKKIYYYKIKEGMLPFLCDHIFKCNYNLFYIFNRY 326


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 621,118,733
Number of Sequences: 1657284
Number of extensions: 10796976
Number of successful extensions: 21150
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21127
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64615845515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)