Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0039.Seq
(674 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VUR1 Cluster: CG7764-PA; n=16; Eumetazoa|Rep: CG7764-... 106 6e-22
UniRef50_Q59FI1 Cluster: Valyl-tRNA synthetase-like protein; n=5... 93 7e-18
UniRef50_Q92759 Cluster: TFIIH basal transcription factor comple... 89 9e-17
UniRef50_Q4T9L6 Cluster: Chromosome undetermined SCAF7537, whole... 81 2e-14
UniRef50_UPI000069F4D5 Cluster: UPI000069F4D5 related cluster; n... 66 6e-10
UniRef50_Q5BXW7 Cluster: SJCHGC02916 protein; n=1; Schistosoma j... 57 4e-07
UniRef50_P87303 Cluster: RNA polymerase II transcription factor ... 40 0.042
UniRef50_Q6BGW8 Cluster: RNA polymerase II transcription factor ... 39 0.13
UniRef50_A0TSJ1 Cluster: Putative uncharacterized protein; n=1; ... 38 0.29
UniRef50_Q02939 Cluster: RNA polymerase II transcription factor ... 38 0.29
UniRef50_A4VQD4 Cluster: Probable c4-dicarboxylate-binding prote... 37 0.39
UniRef50_Q0M070 Cluster: Tryptophan halogenase; n=3; Caulobacter... 36 0.68
UniRef50_Q680U9 Cluster: MRNA, complete cds, clone: RAFL22-33-O0... 36 0.68
UniRef50_P13873 Cluster: Polymerase acidic protein; n=274; Influ... 36 0.68
UniRef50_Q4QA71 Cluster: Putative uncharacterized protein; n=3; ... 36 0.90
UniRef50_A5P1H4 Cluster: LigA; n=1; Methylobacterium sp. 4-46|Re... 36 1.2
UniRef50_Q2PIU7 Cluster: RNA polymerase II transcription initiat... 35 1.6
UniRef50_Q39XR3 Cluster: Putative uncharacterized protein precur... 34 2.7
UniRef50_Q0R0E0 Cluster: HCNC; n=3; Giardia intestinalis|Rep: HC... 34 2.7
UniRef50_A4CKF1 Cluster: TRNA modification GTPase; n=1; Robigini... 34 3.6
UniRef50_Q75RY2 Cluster: Protein PAIR1; n=5; Oryza sativa|Rep: P... 34 3.6
UniRef50_UPI0000D8E35E Cluster: PREDICTED: hypothetical protein;... 33 4.8
UniRef50_Q67M49 Cluster: Putative DNA modification methylase; n=... 33 4.8
UniRef50_A1R5Y4 Cluster: Transcriptional regulator, AraC family;... 33 4.8
UniRef50_A0UII3 Cluster: LigA precursor; n=5; Burkholderia|Rep: ... 33 4.8
UniRef50_Q7R3Z4 Cluster: GLP_68_37985_35016; n=1; Giardia lambli... 33 4.8
UniRef50_Q2GT67 Cluster: Putative uncharacterized protein; n=4; ... 33 4.8
UniRef50_Q0UJE9 Cluster: Putative uncharacterized protein; n=1; ... 33 4.8
UniRef50_UPI0000DD7FDC Cluster: PREDICTED: hypothetical protein;... 33 6.3
UniRef50_Q4TGV1 Cluster: Chromosome undetermined SCAF3455, whole... 33 6.3
UniRef50_Q3JS13 Cluster: Putative uncharacterized protein; n=1; ... 33 6.3
UniRef50_Q8GVJ5 Cluster: Putative uncharacterized protein OSJNBa... 33 6.3
UniRef50_Q1D8M5 Cluster: Putative uncharacterized protein; n=1; ... 33 8.4
UniRef50_A0TK10 Cluster: Putative uncharacterized protein; n=1; ... 33 8.4
>UniRef50_Q9VUR1 Cluster: CG7764-PA; n=16; Eumetazoa|Rep: CG7764-PA
- Drosophila melanogaster (Fruit fly)
Length = 499
Score = 106 bits (254), Expect = 6e-22
Identities = 48/97 (49%), Positives = 70/97 (72%), Gaps = 3/97 (3%)
Frame = +2
Query: 254 LLFVEQPVPQAVVTSWVSQTYAKEQAKACTTLSELSVWQEAPIPGGMPGWMLAQSFKKNL 433
+LFV+QPVPQAVVTSW +Q AKEQA+A + L+ L+VW+ IPGG+ W L+ +FKK++
Sbjct: 78 ILFVDQPVPQAVVTSWGAQRCAKEQAEATSCLTALNVWRVTAIPGGLSAWELSPTFKKSV 137
Query: 434 KVSLLGGGRAWSMSSSLEPDGKARDCR---SWTRTRW 535
+ LLGGG+ W M+++L+ D K RD ++ +RW
Sbjct: 138 RQVLLGGGKPWPMTNTLDKDSKPRDIAFLDTYAMSRW 174
Score = 69.7 bits (163), Expect = 6e-11
Identities = 30/45 (66%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Frame = +3
Query: 120 LQCKDLHEYLKSR-SPQFLETLYNYPTICLAVYRELPELARHFVI 251
L+CKD EYL++R +P+ LE LYNYP ICLAV+RELPE+AR F+I
Sbjct: 32 LECKDFQEYLRTRQTPESLEKLYNYPPICLAVFRELPEIARQFII 76
Score = 58.0 bits (134), Expect = 2e-07
Identities = 30/54 (55%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Frame = +1
Query: 508 LSFLDAYALERWECVLHYMVG-----NAQTEGISADAVRIMLHAGLHDQKRKRR 654
++FLD YA+ RW CVLHYMVG E IS DAVRI+LHA L KR R
Sbjct: 163 IAFLDTYAMSRWRCVLHYMVGTGNRNGTDAEAISPDAVRILLHANL--MKRDER 214
>UniRef50_Q59FI1 Cluster: Valyl-tRNA synthetase-like protein; n=54;
Coelomata|Rep: Valyl-tRNA synthetase-like protein - Homo
sapiens (Human)
Length = 1653
Score = 92.7 bits (220), Expect = 7e-18
Identities = 53/151 (35%), Positives = 79/151 (52%), Gaps = 4/151 (2%)
Frame = +2
Query: 95 FKFESFAYTTMQRPSRIXXXXXXXXXRDSLQLPHYMSRCISRITRASTSLRNPLLFVEQP 274
FK + TMQ + I + P +MS C+ + +LF+EQP
Sbjct: 53 FKGTEPSTPTMQESAGILRGPEPWGIGPIVWAPCHMSGCLQGAPILGKNWVMRMLFLEQP 112
Query: 275 VPQAVVTSWVSQTYAKEQAKACTTLSELSVWQEAPIPGGMPGWMLAQSFKKNLKVSLLGG 454
+PQA V WV + ++K Q ++ LS L +W +PGG+ G +L F++NL+++LLGG
Sbjct: 113 LPQAAVALWVKKEFSKAQEESTGLLSGLRIWHTQLLPGGLQGLILNPIFRQNLRIALLGG 172
Query: 455 GRAWS-MSSSLEPDGKARDCRS---WTRTRW 535
G+AWS +S L PD ARD S + RW
Sbjct: 173 GKAWSDDTSQLGPDKHARDVPSLDKYAEERW 203
Score = 42.3 bits (95), Expect = 0.010
Identities = 21/65 (32%), Positives = 35/65 (53%)
Frame = +1
Query: 436 SVIAWGRQGVEHVVVAGAGREGPGLSFLDAYALERWECVLHYMVGNAQTEGISADAVRIM 615
+++ G+ + G + + LD YA ERWE VLH+MVG + + +S D +++
Sbjct: 168 ALLGGGKAWSDDTSQLGPDKHARDVPSLDKYAEERWEVVLHFMVG-SPSAAVSQDLAQLL 226
Query: 616 LHAGL 630
AGL
Sbjct: 227 SQAGL 231
>UniRef50_Q92759 Cluster: TFIIH basal transcription factor complex
p52 subunit; n=13; Mammalia|Rep: TFIIH basal
transcription factor complex p52 subunit - Homo sapiens
(Human)
Length = 462
Score = 89.0 bits (211), Expect = 9e-17
Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 4/98 (4%)
Frame = +2
Query: 254 LLFVEQPVPQAVVTSWVSQTYAKEQAKACTTLSELSVWQEAPIPGGMPGWMLAQSFKKNL 433
+LF+EQP+PQA V WV + ++K Q ++ LS L +W +PGG+ G +L F++NL
Sbjct: 59 MLFLEQPLPQAAVALWVKKEFSKAQEESTGLLSGLRIWHTQLLPGGLQGLILNPIFRQNL 118
Query: 434 KVSLLGGGRAWS-MSSSLEPDGKARDCRS---WTRTRW 535
+++LLGGG+AWS +S L PD ARD S + RW
Sbjct: 119 RIALLGGGKAWSDDTSQLGPDKHARDVPSLDKYAEERW 156
Score = 55.2 bits (127), Expect = 1e-06
Identities = 23/44 (52%), Positives = 33/44 (75%)
Frame = +3
Query: 120 LQCKDLHEYLKSRSPQFLETLYNYPTICLAVYRELPELARHFVI 251
LQC++L E+L SP L+ LY +P CLAV+RELP LA+++V+
Sbjct: 14 LQCRNLQEFLGGLSPGVLDRLYGHPATCLAVFRELPSLAKNWVM 57
Score = 42.3 bits (95), Expect = 0.010
Identities = 21/65 (32%), Positives = 35/65 (53%)
Frame = +1
Query: 436 SVIAWGRQGVEHVVVAGAGREGPGLSFLDAYALERWECVLHYMVGNAQTEGISADAVRIM 615
+++ G+ + G + + LD YA ERWE VLH+MVG + + +S D +++
Sbjct: 121 ALLGGGKAWSDDTSQLGPDKHARDVPSLDKYAEERWEVVLHFMVG-SPSAAVSQDLAQLL 179
Query: 616 LHAGL 630
AGL
Sbjct: 180 SQAGL 184
>UniRef50_Q4T9L6 Cluster: Chromosome undetermined SCAF7537, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7537,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 471
Score = 81.4 bits (192), Expect = 2e-14
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = +2
Query: 254 LLFVEQPVPQAVVTSWVSQTYAKEQAKACTTLSELSVWQEAPIPGGMPGWMLAQSFKKNL 433
+LF+EQP+PQA V WV + ++ + L+ L +W + GG+ G++L FK+NL
Sbjct: 82 MLFLEQPLPQAAVALWVGKDSQRDHDECVCVLAGLRLWHSQHLQGGLQGYVLNPVFKENL 141
Query: 434 KVSLLGGGRAWS-MSSSLEPDGKARDCRSWTR 526
K +LLGGGRAW+ +L PD ARD S R
Sbjct: 142 KTALLGGGRAWAEEGGALGPDRHARDIGSLDR 173
Score = 55.2 bits (127), Expect = 1e-06
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = +3
Query: 120 LQCKDLHEYLKSRSPQFLETLYNYPTICLAVYR 218
LQCK+LH+YLK SP+ L+ LYN+P CLAVYR
Sbjct: 23 LQCKNLHQYLKELSPEVLDRLYNHPATCLAVYR 55
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/65 (36%), Positives = 36/65 (55%)
Frame = +1
Query: 436 SVIAWGRQGVEHVVVAGAGREGPGLSFLDAYALERWECVLHYMVGNAQTEGISADAVRIM 615
+++ GR E G R + LD YA ERWE +LH+MVG + +S D +++
Sbjct: 144 ALLGGGRAWAEEGGALGPDRHARDIGSLDRYATERWEVILHFMVG-SPCAAVSQDLAQLL 202
Query: 616 LHAGL 630
+HAGL
Sbjct: 203 VHAGL 207
>UniRef50_UPI000069F4D5 Cluster: UPI000069F4D5 related cluster; n=1;
Xenopus tropicalis|Rep: UPI000069F4D5 UniRef100 entry -
Xenopus tropicalis
Length = 419
Score = 66.5 bits (155), Expect = 6e-10
Identities = 29/67 (43%), Positives = 43/67 (64%)
Frame = +2
Query: 254 LLFVEQPVPQAVVTSWVSQTYAKEQAKACTTLSELSVWQEAPIPGGMPGWMLAQSFKKNL 433
+LF+EQP+PQA V WV + KE + L+ L +W +PGG+ G +L F++NL
Sbjct: 53 MLFLEQPLPQAAVALWVKKENFKEHEENTQVLTGLRLWHTQQLPGGLQGLILNPIFRENL 112
Query: 434 KVSLLGG 454
K++LLGG
Sbjct: 113 KIALLGG 119
Score = 61.7 bits (143), Expect = 2e-08
Identities = 25/44 (56%), Positives = 36/44 (81%)
Frame = +3
Query: 120 LQCKDLHEYLKSRSPQFLETLYNYPTICLAVYRELPELARHFVI 251
L+CK+LHE+L+ SP L+ LYN+P CLAV+RELP LA+++V+
Sbjct: 8 LKCKNLHEFLQELSPGVLDQLYNHPATCLAVFRELPGLAKNYVM 51
>UniRef50_Q5BXW7 Cluster: SJCHGC02916 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02916 protein - Schistosoma
japonicum (Blood fluke)
Length = 141
Score = 56.8 bits (131), Expect = 4e-07
Identities = 21/69 (30%), Positives = 42/69 (60%)
Frame = +2
Query: 254 LLFVEQPVPQAVVTSWVSQTYAKEQAKACTTLSELSVWQEAPIPGGMPGWMLAQSFKKNL 433
LLF+EQP+P+++V+ WV + + +C+ L+ L +W W L + +++++
Sbjct: 49 LLFIEQPIPKSIVSGWVEKGSSALLNDSCSALTVLRIWHSTDTNVSGGSWSLNKKYQESI 108
Query: 434 KVSLLGGGR 460
++SL GGG+
Sbjct: 109 RISLFGGGK 117
Score = 48.8 bits (111), Expect = 1e-04
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +3
Query: 135 LHEYLKSRSPQFLETLYNYPTICLAVYRELPELARHFVI 251
+ EYLK+ L+ LY +P CL V+RELPELA+H V+
Sbjct: 9 IFEYLKNVGAHMLDELYTHPPTCLVVFRELPELAKHIVM 47
>UniRef50_P87303 Cluster: RNA polymerase II transcription factor B
subunit 2; n=3; Dikarya|Rep: RNA polymerase II
transcription factor B subunit 2 - Schizosaccharomyces
pombe (Fission yeast)
Length = 447
Score = 40.3 bits (90), Expect = 0.042
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 508 LSFLDAYALERWECVLHYMVGNAQTEGISADAVRIMLHAGL-HDQKRKRRVRR 663
+ FLDAYA E WE +LH+MVG + + + ++ GL K + R+ R
Sbjct: 128 VDFLDAYAKETWETILHFMVGTPEAKFPGEGVLSLLKRGGLMSGPKNQLRITR 180
>UniRef50_Q6BGW8 Cluster: RNA polymerase II transcription factor B
subunit 2; n=4; Saccharomycetales|Rep: RNA polymerase II
transcription factor B subunit 2 - Debaryomyces hansenii
(Yeast) (Torulaspora hansenii)
Length = 515
Score = 38.7 bits (86), Expect = 0.13
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +1
Query: 508 LSFLDAYALERWECVLHYMVGNAQTEGISADAVRIMLHAGLHDQKRK 648
+ FLD++AL++WE +LH+MVG + S + ++ GL + K
Sbjct: 134 IKFLDSFALQKWESILHFMVGTELSVTPSNSVLSLLKLGGLMEGTNK 180
Score = 34.7 bits (76), Expect = 2.1
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +3
Query: 135 LHEYLKSRSPQFLETLYNYPTICLAVYRELPELARHFVI 251
++E+L+ Q LY P CL++YR LP +A+ +++
Sbjct: 11 VNEHLEGLPKQVQSRLYEAPATCLSIYRLLPPIAKFYIM 49
>UniRef50_A0TSJ1 Cluster: Putative uncharacterized protein; n=1;
Burkholderia cenocepacia MC0-3|Rep: Putative
uncharacterized protein - Burkholderia cenocepacia MC0-3
Length = 599
Score = 37.5 bits (83), Expect = 0.29
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = +3
Query: 366 GRRRPYRGACRAGCSHSRLKRTSKCHCLGEAGRGACRRRWSRTGRPGT 509
GRRRP R A A + S R+S G + R A RRRW R+ RPGT
Sbjct: 275 GRRRPRR-APPANAARSACARSSTP---GASARAAARRRWRRSRRPGT 318
>UniRef50_Q02939 Cluster: RNA polymerase II transcription factor B
subunit 2; n=7; Saccharomycetales|Rep: RNA polymerase II
transcription factor B subunit 2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 513
Score = 37.5 bits (83), Expect = 0.29
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 141 EYLKSRSPQFLETLYNYPTICLAVYRELPELARHFVI 251
+YL+ Q LY P CLA+YR LP LA+ F++
Sbjct: 12 QYLEEIPQQVQNRLYTSPATCLAIYRILPPLAKFFIM 48
Score = 35.9 bits (79), Expect = 0.90
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +1
Query: 508 LSFLDAYALERWECVLHYMVGNAQTEGISADAVRIMLHAGLHDQ 639
L LD Y+ +WE +LH+MVG + S + ++ H+ L ++
Sbjct: 132 LDLLDEYSANKWETILHFMVGTPLAKIPSEKVLNLLKHSKLMEE 175
>UniRef50_A4VQD4 Cluster: Probable c4-dicarboxylate-binding protein;
n=1; Pseudomonas stutzeri A1501|Rep: Probable
c4-dicarboxylate-binding protein - Pseudomonas stutzeri
(strain A1501)
Length = 407
Score = 37.1 bits (82), Expect = 0.39
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 434 KVSLLG-GGRAWSMSSSLEPDGKARDC-RSWTRTRWSAGSACCTTWWATRRPRASA 595
+V L+ GGR+ S L P + C R W R S S+ WW T RPRA A
Sbjct: 66 RVGLISRGGRSCSSLWLLRPVRRCCSCFRQWPRKPPSPSSSSSPMWWRTTRPRARA 121
>UniRef50_Q0M070 Cluster: Tryptophan halogenase; n=3; Caulobacter
sp. K31|Rep: Tryptophan halogenase - Caulobacter sp. K31
Length = 599
Score = 36.3 bits (80), Expect = 0.68
Identities = 22/66 (33%), Positives = 29/66 (43%)
Frame = +2
Query: 476 SSLEPDGKARDCRSWTRTRWSAGSACCTTWWATRRPRASAPTPSA*CCTPDFMTRNAKDG 655
S+ P R C WTR WS ++ TW P SA +A CC D +A G
Sbjct: 16 SATAPPSTRRRCWPWTRGAWSGSASAPCTWCWVPTPSGSARRCAA-CCRDD--ANDAIWG 72
Query: 656 SAVITR 673
A +T+
Sbjct: 73 GADVTK 78
>UniRef50_Q680U9 Cluster: MRNA, complete cds, clone: RAFL22-33-O09;
n=9; Magnoliophyta|Rep: MRNA, complete cds, clone:
RAFL22-33-O09 - Arabidopsis thaliana (Mouse-ear cress)
Length = 452
Score = 36.3 bits (80), Expect = 0.68
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Frame = +1
Query: 502 PGLSFLDAYALERWECVLHYMVGNAQTE---GISADAVRIMLHAGLHDQKRK 648
P L L+ YAL++WEC L ++ + Q E GIS+ ++I GL Q+ K
Sbjct: 134 PSLQELETYALKQWECFLLQLINSGQGEKLTGISSSMMKI-FQRGLLSQRDK 184
Score = 33.1 bits (72), Expect = 6.3
Identities = 16/68 (23%), Positives = 32/68 (47%)
Frame = +2
Query: 254 LLFVEQPVPQAVVTSWVSQTYAKEQAKACTTLSELSVWQEAPIPGGMPGWMLAQSFKKNL 433
+L+++ PVP ++ WV + A L +L ++ E + L +F+ NL
Sbjct: 51 MLYIDVPVPATMMEEWVLADGTSKHRVAIDRLIQLRIFSEISDRKRGTSYSLNPTFQNNL 110
Query: 434 KVSLLGGG 457
+ ++ GG
Sbjct: 111 QKHIISGG 118
>UniRef50_P13873 Cluster: Polymerase acidic protein; n=274;
Influenza B virus|Rep: Polymerase acidic protein -
Influenza B virus (strain B/Ann Arbor/1/1966
[cold-adapted])
Length = 726
Score = 36.3 bits (80), Expect = 0.68
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = +1
Query: 544 ECVLHYMVGNAQTEGISADAVRIML 618
+C++HY+ GNAQ EG SA++ R++L
Sbjct: 639 KCLMHYVFGNAQLEGFSAESRRLLL 663
>UniRef50_Q4QA71 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 877
Score = 35.9 bits (79), Expect = 0.90
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -3
Query: 558 VQHALPALQRVRVQERQSRAFPSGSSDDDMLHALPPPSNDTLR 430
++ AL ALQR R Q + ++++LHA PP ND LR
Sbjct: 695 LREALDALQRERTQRLRLEHLMKRREEEEVLHAAPPGDNDLLR 737
>UniRef50_A5P1H4 Cluster: LigA; n=1; Methylobacterium sp. 4-46|Rep:
LigA - Methylobacterium sp. 4-46
Length = 122
Score = 35.5 bits (78), Expect = 1.2
Identities = 23/70 (32%), Positives = 31/70 (44%)
Frame = +3
Query: 297 PGSRRHMPKNKQKHALHCQSSPCGRRRPYRGACRAGCSHSRLKRTSKCHCLGEAGRGACR 476
PG+ R P + A C+++P GR RG AG R + + GR R
Sbjct: 33 PGAARSRPVRQPSGA--CRAAPRGRAAGIRGRGAAGSPWRRTRPAPRSRPGSRPGR---R 87
Query: 477 RRWSRTGRPG 506
RRW + RPG
Sbjct: 88 RRWGGSARPG 97
>UniRef50_Q2PIU7 Cluster: RNA polymerase II transcription
initiation/nucleotide excision repair factor TFIIH;
n=11; Pezizomycotina|Rep: RNA polymerase II
transcription initiation/nucleotide excision repair
factor TFIIH - Aspergillus oryzae
Length = 480
Score = 35.1 bits (77), Expect = 1.6
Identities = 17/72 (23%), Positives = 33/72 (45%)
Frame = +2
Query: 254 LLFVEQPVPQAVVTSWVSQTYAKEQAKACTTLSELSVWQEAPIPGGMPGWMLAQSFKKNL 433
LL+++ P+P + +WV KE+ A + L L + I + + + F +L
Sbjct: 51 LLYLKDPLPATDLEAWVKAESLKERDNALSILGRLHILSNTVITDNVRAYKVTDPFASSL 110
Query: 434 KVSLLGGGRAWS 469
+ +L G + S
Sbjct: 111 RQALTGAEKTQS 122
Score = 33.9 bits (74), Expect = 3.6
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +1
Query: 517 LDAYALERWECVLHYMVGNAQTEGISADA-----VRIMLHAGLHDQKRKRRV 657
LD YA +WE VL YMVG + GI DA V+ +L AG + R RRV
Sbjct: 140 LDEYARRQWEGVLGYMVGTSGL-GIQRDANLSKGVKQLLQAGHLVEIRDRRV 190
>UniRef50_Q39XR3 Cluster: Putative uncharacterized protein
precursor; n=1; Geobacter metallireducens GS-15|Rep:
Putative uncharacterized protein precursor - Geobacter
metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
Length = 654
Score = 34.3 bits (75), Expect = 2.7
Identities = 24/97 (24%), Positives = 40/97 (41%)
Frame = +2
Query: 263 VEQPVPQAVVTSWVSQTYAKEQAKACTTLSELSVWQEAPIPGGMPGWMLAQSFKKNLKVS 442
+ P+PQ V+ SW+ T S L+ + PIP + WM + + +L +
Sbjct: 427 INWPIPQTVMVSWLGDLMG-----GGGTFSYLNNRDDTPIPNWVT-WMGSCTKAADLATA 480
Query: 443 LLGGGRAWSMSSSLEPDGKARDCRSWTRTRWSAGSAC 553
G W ++ + P C + WS GS+C
Sbjct: 481 CASFGMTWGGNNCVTPIPDQLTCEQRSNLFWS-GSSC 516
>UniRef50_Q0R0E0 Cluster: HCNC; n=3; Giardia intestinalis|Rep: HCNC -
Giardia lamblia (Giardia intestinalis)
Length = 1609
Score = 34.3 bits (75), Expect = 2.7
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Frame = -3
Query: 423 LNDCASIQPGMPPGMGASCHTESSDSVVHAFACSLAYVCETQDVTTACGTGCSTNSSGLR 244
L+ C +PG P + T ++ VV C L VCE + ++ C TGC S
Sbjct: 1205 LDSCVECRPGASPTL-----TPDTELVVCETVCPLGCVCEDAEDSSIC-TGC--QSGYYE 1256
Query: 243 SDVLALVIRDIQR-DI*WGNCKESLETAETAT*DIREGLCIV 121
VLA I +++ D+ +CK+ L T T E C+V
Sbjct: 1257 VSVLARFIMRLRKTDV---HCKKCLANCMTCT---DESTCLV 1292
>UniRef50_A4CKF1 Cluster: TRNA modification GTPase; n=1;
Robiginitalea biformata HTCC2501|Rep: TRNA modification
GTPase - Robiginitalea biformata HTCC2501
Length = 186
Score = 33.9 bits (74), Expect = 3.6
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -3
Query: 546 LPALQRVRVQ-ERQSRAFPSGSSDDDMLHALPPPSNDTLRFFLNDCASIQPGMPPG 382
LPALQR+ +Q +S GS D + +AL + +RF + + S++P PG
Sbjct: 57 LPALQRLNLQIVAESLKSGKGSMDKNTYNALNTDDHKDIRFRMKEVRSLEPVQSPG 112
>UniRef50_Q75RY2 Cluster: Protein PAIR1; n=5; Oryza sativa|Rep:
Protein PAIR1 - Oryza sativa subsp. japonica (Rice)
Length = 492
Score = 33.9 bits (74), Expect = 3.6
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = -3
Query: 498 FPSGSSDDDMLHALPPPSNDTLRFFLNDCASIQPGMPPGMGASCHTESS 352
F S DD++L LP P+ D RF L+D +S + P ASC E S
Sbjct: 69 FSQVSLDDNLLTLLPSPTRDQ-RFGLHDDSSKRMSSLPASSASCAREES 116
>UniRef50_UPI0000D8E35E Cluster: PREDICTED: hypothetical protein;
n=2; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 663
Score = 33.5 bits (73), Expect = 4.8
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +3
Query: 351 QSSPCGRRRPYRGACRAGCSHSRLKRTSKCHCLGEAGRGACRRRWSRTGRPGT 509
Q P + PY G HS + R CH L +G+ RRW RTG+P +
Sbjct: 509 QPGPSHYQSPYSGE---NPPHSHMNRCRVCHNLFTYNQGS--RRWDRTGQPSS 556
>UniRef50_Q67M49 Cluster: Putative DNA modification methylase; n=1;
Symbiobacterium thermophilum|Rep: Putative DNA
modification methylase - Symbiobacterium thermophilum
Length = 395
Score = 33.5 bits (73), Expect = 4.8
Identities = 20/87 (22%), Positives = 37/87 (42%)
Frame = +2
Query: 218 RITRASTSLRNPLLFVEQPVPQAVVTSWVSQTYAKEQAKACTTLSELSVWQEAPIPGGMP 397
R RA + L N + P V WV + E+ L+ + + A +P +P
Sbjct: 179 RTRRAPSYLSNQMPRTYATKPDPAVRFWVRRGMRPEEVDVLDVLARRARYSFAALPPPVP 238
Query: 398 GWMLAQSFKKNLKVSLLGGGRAWSMSS 478
G +L ++ + ++ GG W ++S
Sbjct: 239 GCILQADSREPGAIPVVDGGYRWVITS 265
>UniRef50_A1R5Y4 Cluster: Transcriptional regulator, AraC family;
n=1; Arthrobacter aurescens TC1|Rep: Transcriptional
regulator, AraC family - Arthrobacter aurescens (strain
TC1)
Length = 328
Score = 33.5 bits (73), Expect = 4.8
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +1
Query: 457 QGVEHVVVAGAGREGPGLSFLDAYALERWECVLHYMVGNAQTEGISADAVRIMLH 621
QGVEH++VAG G G+ DA+ + R + V +++ N E +S ++ LH
Sbjct: 184 QGVEHLIVAGLGGLTRGVP--DAHRISRRKLVQTHILENLGDESLSIKSIASDLH 236
>UniRef50_A0UII3 Cluster: LigA precursor; n=5; Burkholderia|Rep:
LigA precursor - Burkholderia multivorans ATCC 17616
Length = 691
Score = 33.5 bits (73), Expect = 4.8
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +3
Query: 300 GSRRHMPKNKQKHALHCQSSPCGRRRPYRGACRA--GCSHSRLKRTSKCHCLGEAGRGAC 473
G RR + + HA ++ P RRP G CRA G S +R ++ A R
Sbjct: 510 GVRRRC-RARTAHAARGRADPGAARRPREGRCRAPRGARRSAARRHARDAARRAAARARA 568
Query: 474 RR----RWSRTGRP 503
RR R +R GRP
Sbjct: 569 RRTRRGRGARAGRP 582
>UniRef50_Q7R3Z4 Cluster: GLP_68_37985_35016; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_68_37985_35016 - Giardia lamblia ATCC
50803
Length = 989
Score = 33.5 bits (73), Expect = 4.8
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -3
Query: 405 IQPGMPPGMGASCHTESSDSVVHAFACSLAYVCET-QDVTTACGTGCST 262
IQPG P G SC S FAC LAY C+T ACG ++
Sbjct: 858 IQPGPLPNNG-SCKHASHSYRWFRFACGLAYPCDTCHSKACACGNSVAS 905
>UniRef50_Q2GT67 Cluster: Putative uncharacterized protein; n=4;
Sordariomycetes|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 503
Score = 33.5 bits (73), Expect = 4.8
Identities = 14/29 (48%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Frame = +1
Query: 508 LSFLDAYALERWECVLHYMVGN--AQTEG 588
++ LD YA ++WE +LHY+V + AQ+EG
Sbjct: 138 IAHLDGYARKKWEDILHYVVNSVPAQSEG 166
Score = 33.1 bits (72), Expect = 6.3
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 254 LLFVEQPVPQAVVTSWVSQTYAKEQAKACTTLSELSVWQEAPIPGGMPGWM-LAQSFKKN 430
LL++ P+ A + WV ++ +A + L L + Q P P M L +FK +
Sbjct: 51 LLYMPSPLLLAELDVWVRAEGKMQRDRALSILRSLHIIQITPPGKDKPQEMQLTTNFKNS 110
Query: 431 LKVSLLGGG 457
L+++L GGG
Sbjct: 111 LRLALEGGG 119
>UniRef50_Q0UJE9 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 473
Score = 33.5 bits (73), Expect = 4.8
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Frame = +1
Query: 481 AGAGREGPGLSFLDAYALERWECVLHYMVGNA---QTEGISAD---AVRIMLHAG 627
A G + + FLDA+A E+WE +L +MV A Q + D + +LHAG
Sbjct: 129 AERGEKRLSIEFLDAHAREQWEGILFFMVSGAAGFQPGSVKMDVGPGTKKLLHAG 183
>UniRef50_UPI0000DD7FDC Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 150
Score = 33.1 bits (72), Expect = 6.3
Identities = 24/79 (30%), Positives = 28/79 (35%)
Frame = +2
Query: 368 QEAPIPGGMPGWMLAQSFKKNLKVSLLGGGRAWSMSSSLEPDGKARDCRSWTRTRWSAGS 547
Q AP P W S LKV GG W + S W+ S
Sbjct: 49 QPAPTPLVQSSWDTICSPATPLKVKGTGG---WGFPARPTTSCCPSSRHSHHHGPWTTQS 105
Query: 548 ACCTTWWATRRPRASAPTP 604
+CC + RRPR S P P
Sbjct: 106 SCCRPLTSWRRPRTSCPLP 124
>UniRef50_Q4TGV1 Cluster: Chromosome undetermined SCAF3455, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF3455,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 348
Score = 33.1 bits (72), Expect = 6.3
Identities = 29/96 (30%), Positives = 38/96 (39%), Gaps = 1/96 (1%)
Frame = +2
Query: 368 QEAPIPGGMPGWMLAQSFKKNLKVSLLGGGRAWSMSSSLEPDGKARDCRSWTRTRWSAGS 547
Q P+PG GW ++ +K L+ GG G AR C WT R A S
Sbjct: 211 QRRPLPGHRRGWRRSKEVRKRLRRRGDPGGAG---------PGAARRC--WTTCRGGATS 259
Query: 548 -ACCTTWWATRRPRASAPTPSA*CCTPDFMTRNAKD 652
W++ PR P P A +T NAK+
Sbjct: 260 PRPAQRDWSSSAPRRRPPRPRAAPLPTATVTANAKE 295
>UniRef50_Q3JS13 Cluster: Putative uncharacterized protein; n=1;
Burkholderia pseudomallei 1710b|Rep: Putative
uncharacterized protein - Burkholderia pseudomallei
(strain 1710b)
Length = 1212
Score = 33.1 bits (72), Expect = 6.3
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = +3
Query: 300 GSRRHMPKNKQKHALHCQSSPCGRR---RPYRGACRAGCSHSRLKRTSKCHCL-GEAGRG 467
G H ++ ++ A + CGRR RP G R C R +R+ + H GE
Sbjct: 410 GDGEHGERDGRRRA--ATRAACGRRCADRPRAGVDRTRCRRGR-RRSGREHAARGERDAR 466
Query: 468 ACRRRWSRTGRP 503
A RRR S GRP
Sbjct: 467 AARRRVSGAGRP 478
>UniRef50_Q8GVJ5 Cluster: Putative uncharacterized protein
OSJNBa0066B06.114; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBa0066B06.114 - Oryza sativa subsp. japonica (Rice)
Length = 238
Score = 33.1 bits (72), Expect = 6.3
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +2
Query: 449 GGGRAWSMSSSLEPDGKARDCRSWTRTRWSAGSACCTTWWATRRPRASAPTP 604
G G +++ G+ R C T RW + C ATR PR + P P
Sbjct: 115 GSGGRGPAATTASAAGRERGCARRTMQRWEENTGCRHPSAATRPPRRTTPPP 166
>UniRef50_Q1D8M5 Cluster: Putative uncharacterized protein; n=1;
Myxococcus xanthus DK 1622|Rep: Putative uncharacterized
protein - Myxococcus xanthus (strain DK 1622)
Length = 515
Score = 32.7 bits (71), Expect = 8.4
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +2
Query: 512 RSWTRTRWSAGSACCTTWWATR---RPRASAPTPSA*CCTPDFMTRNAKDGS 658
R W RW+A + C WW +R PR APT C P T + + GS
Sbjct: 4 RRWRWMRWAASAGC--RWWPSRTRWAPRTYAPTALVGRCAP--CTASRRPGS 51
>UniRef50_A0TK10 Cluster: Putative uncharacterized protein; n=1;
Burkholderia ambifaria MC40-6|Rep: Putative
uncharacterized protein - Burkholderia ambifaria MC40-6
Length = 206
Score = 32.7 bits (71), Expect = 8.4
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +3
Query: 384 RGACRAGCSHSRLKRTSKCHCLGEAGRGACRRRWSRTG 497
RGACRAG +R+ R ++ + AGRG RRR + G
Sbjct: 22 RGACRAGRRAARVLRRARRGGVSGAGRGGKRRRSAARG 59
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,199,769
Number of Sequences: 1657284
Number of extensions: 13195969
Number of successful extensions: 47067
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 44516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47018
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52066120554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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