Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301F02f
         (362 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8I205 Cluster: Putative uncharacterized protein PFD009...    33   2.1  
UniRef50_Q9Z6K7 Cluster: Putative uncharacterized protein; n=1; ...    32   3.6  
UniRef50_UPI0000499E37 Cluster: AAA family ATPase; n=1; Entamoeb...    31   4.8  
UniRef50_A4BID4 Cluster: Putative uncharacterized protein; n=1; ...    31   4.8  
UniRef50_Q3ZVI0 Cluster: Putative uncharacterized protein pE; n=...    31   6.3  
UniRef50_A2EH35 Cluster: Putative uncharacterized protein; n=1; ...    31   8.3  

>UniRef50_Q8I205 Cluster: Putative uncharacterized protein PFD0095c;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFD0095c - Plasmodium falciparum
           (isolate 3D7)
          Length = 575

 Score = 32.7 bits (71), Expect = 2.1
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +3

Query: 129 EFYNDNVIFDYVDNGSHPKNINPLTVLAKENVF 227
           E Y DN+ +D++DN ++  NIN   ++   N F
Sbjct: 213 ETYMDNIFYDWIDNNNNNLNINEFRMIIDANKF 245


>UniRef50_Q9Z6K7 Cluster: Putative uncharacterized protein; n=1;
           Chlamydophila pneumoniae|Rep: Putative uncharacterized
           protein - Chlamydia pneumoniae (Chlamydophila
           pneumoniae)
          Length = 251

 Score = 31.9 bits (69), Expect = 3.6
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -2

Query: 307 SYCI*ESQNNFNINLYAK-KYTLQCYTRNTFSFARTVRGFIF 185
           SYCI   +NNF+++ Y K  Y+L CY  N  +     R F F
Sbjct: 18  SYCITVFRNNFSLSCYDKIFYSLSCYVFNGPNSIGRCRSFCF 59


>UniRef50_UPI0000499E37 Cluster: AAA family ATPase; n=1; Entamoeba
           histolytica HM-1:IMSS|Rep: AAA family ATPase - Entamoeba
           histolytica HM-1:IMSS
          Length = 623

 Score = 31.5 bits (68), Expect = 4.8
 Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 5/41 (12%)
 Frame = -3

Query: 129 LHDNNCLLI*S-----FKEYLIVVTSILKRFKINGNVIFCT 22
           L+ +NC++I        K+Y +++  I+K+ KIN N+I CT
Sbjct: 235 LNVHNCIIILDDIDELIKDYSLLLIHIIKQLKINNNLIVCT 275


>UniRef50_A4BID4 Cluster: Putative uncharacterized protein; n=1;
           Reinekea sp. MED297|Rep: Putative uncharacterized
           protein - Reinekea sp. MED297
          Length = 180

 Score = 31.5 bits (68), Expect = 4.8
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = +3

Query: 108 ANNYYHEEFYNDNVIFDYVDNGSHPKNIN--PLTVL 209
           A +YYH  F+ D  +F Y++ G H  N N  PLT+L
Sbjct: 17  AASYYHSHFHIDKKLFAYLNIGIHFFNDNKVPLTLL 52


>UniRef50_Q3ZVI0 Cluster: Putative uncharacterized protein pE; n=12;
           Spiroplasma|Rep: Putative uncharacterized protein pE -
           Spiroplasma citri
          Length = 218

 Score = 31.1 bits (67), Expect = 6.3
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 205 FLQRKMCFLCNTAVYIFLHIDLY*NYF 285
           ++ +KMCFL  T  Y  + +D+Y NY+
Sbjct: 65  YVPKKMCFLDKTGKYFLVGLDMYFNYW 91


>UniRef50_A2EH35 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 692

 Score = 30.7 bits (66), Expect = 8.3
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = -3

Query: 345 TYIKSSFEDNNLSVIVFENPKIILI*IYMQKNIH--CSVTQETHFPLQEL*GD 193
           ++ + +FED N+SV   EN KI +  I ++  +H      ++ HF +Q L  D
Sbjct: 446 SFYEKNFEDKNISVKSNENDKIYVKKIKLEDAVHYIFKKYKQNHFKIQNLEND 498


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 320,860,969
Number of Sequences: 1657284
Number of extensions: 5808514
Number of successful extensions: 13760
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13744
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 12794443530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)