Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301E09f
         (428 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5HZE9 Cluster: Putative lipoprotein precursor; n=8; Cl...    32   4.4  
UniRef50_P91325 Cluster: Putative uncharacterized protein; n=1; ...    32   4.4  
UniRef50_Q4LA79 Cluster: Similar to unknown protein; n=1; Staphy...    32   5.8  
UniRef50_Q24CA9 Cluster: Putative uncharacterized protein; n=1; ...    32   5.8  

>UniRef50_A5HZE9 Cluster: Putative lipoprotein precursor; n=8;
           Clostridium botulinum|Rep: Putative lipoprotein
           precursor - Clostridium botulinum A str. ATCC 3502
          Length = 379

 Score = 32.3 bits (70), Expect = 4.4
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -3

Query: 180 QEDEKNTKNKLSQHENENAKQIDVVDDAEAGVLN 79
           QE+ KN + K SQ EN+N K  +V D  + G +N
Sbjct: 217 QEENKNKEVKNSQEENKNQKVKEVKDGKQIGFIN 250


>UniRef50_P91325 Cluster: Putative uncharacterized protein; n=1;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 214

 Score = 32.3 bits (70), Expect = 4.4
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -3

Query: 183 MQEDEKNTKNKLSQHENENAKQIDVVDDAEAG 88
           M++D  ++ NK ++HEN N   +++VD+   G
Sbjct: 7   MKKDSNSSSNKETKHENSNVSVLEIVDEHNIG 38


>UniRef50_Q4LA79 Cluster: Similar to unknown protein; n=1;
           Staphylococcus haemolyticus JCSC1435|Rep: Similar to
           unknown protein - Staphylococcus haemolyticus (strain
           JCSC1435)
          Length = 152

 Score = 31.9 bits (69), Expect = 5.8
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -3

Query: 213 PTYKLYCFVFMQEDEKNTKNKLSQHENENAKQIDVVDDAEAG 88
           P  K Y F   ++DE NT    ++ + EN   +++VDD   G
Sbjct: 54  PNKKGYFFAMWKKDENNTNVPFTEDDLENQLIVNIVDDKRRG 95


>UniRef50_Q24CA9 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1288

 Score = 31.9 bits (69), Expect = 5.8
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -1

Query: 242 RKYDYIILNHLPTNYTVLFLCRKMKKTQKINYRSTKMK 129
           RK+ Y  ++HL TN+ +  +C  + K  K N R+   K
Sbjct: 780 RKFQYFSVSHLNTNFPIKHICISVLKENKSNIRNLLKK 817


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 400,191,116
Number of Sequences: 1657284
Number of extensions: 7220647
Number of successful extensions: 19653
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19637
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20653970351
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)