Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301D04f
         (358 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q16IH6 Cluster: Putative uncharacterized protein; n=1; ...    47   8e-05
UniRef50_P10383 Cluster: Protein ovarian tumor locus; n=6; melan...    43   0.001
UniRef50_UPI00005481DE Cluster: OTU like protein; n=1; Danio rer...    39   0.029
UniRef50_Q49HH8 Cluster: OTU-like protein; n=3; Danio rerio|Rep:...    39   0.029
UniRef50_A6H706 Cluster: CXorf45 protein; n=2; Bos taurus|Rep: C...    37   0.089
UniRef50_A3KGD0 Cluster: Novel protein possible orthologue to hu...    37   0.12 
UniRef50_Q9XXK5 Cluster: Putative uncharacterized protein scd-1;...    35   0.48 
UniRef50_Q5P9I1 Cluster: 1-acyl-sn-glycerol-3-phosphate acyltran...    31   4.4  
UniRef50_Q3VPJ7 Cluster: Putative uncharacterized protein precur...    31   5.9  
UniRef50_Q3W8J3 Cluster: Putative oxidoreductase; n=1; Frankia s...    31   7.7  
UniRef50_Q6V0X3 Cluster: Membrane-associated histidine-rich prot...    31   7.7  

>UniRef50_Q16IH6 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 533

 Score = 47.2 bits (107), Expect = 8e-05
 Identities = 17/27 (62%), Positives = 25/27 (92%)
 Frame = +3

Query: 96  KSVQPNGSDLPMNDIPTLRYYYNLGVE 176
           +S+ PNGSD+P++D+ TLRY+YNLG+E
Sbjct: 237 QSIVPNGSDMPLDDLITLRYFYNLGIE 263


>UniRef50_P10383 Cluster: Protein ovarian tumor locus; n=6;
           melanogaster subgroup|Rep: Protein ovarian tumor locus -
           Drosophila melanogaster (Fruit fly)
          Length = 853

 Score = 43.2 bits (97), Expect = 0.001
 Identities = 17/30 (56%), Positives = 24/30 (80%)
 Frame = +3

Query: 96  KSVQPNGSDLPMNDIPTLRYYYNLGVECMW 185
           +S+ PNG DLP+ D+ TLRY+YN+GV+  W
Sbjct: 612 RSLHPNGEDLPV-DMVTLRYFYNMGVDLHW 640


>UniRef50_UPI00005481DE Cluster: OTU like protein; n=1; Danio
           rerio|Rep: OTU like protein - Danio rerio
          Length = 889

 Score = 38.7 bits (86), Expect = 0.029
 Identities = 18/32 (56%), Positives = 21/32 (65%)
 Frame = +3

Query: 99  SVQPNGSDLPMNDIPTLRYYYNLGVECMWAAY 194
           S  PNGSDLP  D   L+YYYNLGV+    +Y
Sbjct: 710 SYDPNGSDLP-RDCKVLQYYYNLGVQWYQQSY 740


>UniRef50_Q49HH8 Cluster: OTU-like protein; n=3; Danio rerio|Rep:
           OTU-like protein - Danio rerio (Zebrafish) (Brachydanio
           rerio)
          Length = 859

 Score = 38.7 bits (86), Expect = 0.029
 Identities = 18/32 (56%), Positives = 21/32 (65%)
 Frame = +3

Query: 99  SVQPNGSDLPMNDIPTLRYYYNLGVECMWAAY 194
           S  PNGSDLP  D   L+YYYNLGV+    +Y
Sbjct: 680 SYDPNGSDLP-RDCKVLQYYYNLGVQWYQQSY 710


>UniRef50_A6H706 Cluster: CXorf45 protein; n=2; Bos taurus|Rep:
           CXorf45 protein - Bos taurus (Bovine)
          Length = 538

 Score = 37.1 bits (82), Expect = 0.089
 Identities = 16/34 (47%), Positives = 23/34 (67%)
 Frame = +3

Query: 78  SIPHVYKSVQPNGSDLPMNDIPTLRYYYNLGVEC 179
           ++P    S  P+GSDLP  D   L+YY+NLG++C
Sbjct: 359 ALPPPPYSCDPSGSDLPQ-DTKVLQYYFNLGLQC 391


>UniRef50_A3KGD0 Cluster: Novel protein possible orthologue to human
           chromosome X open reading frame 45; n=1; Mus
           musculus|Rep: Novel protein possible orthologue to human
           chromosome X open reading frame 45 - Mus musculus
           (Mouse)
          Length = 782

 Score = 36.7 bits (81), Expect = 0.12
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = +3

Query: 99  SVQPNGSDLPMNDIPTLRYYYNLGVEC 179
           S  P+GSDLP  D   L+YY+NLG++C
Sbjct: 573 SYDPSGSDLPQ-DTKVLQYYFNLGLQC 598


>UniRef50_Q9XXK5 Cluster: Putative uncharacterized protein scd-1;
           n=4; cellular organisms|Rep: Putative uncharacterized
           protein scd-1 - Caenorhabditis elegans
          Length = 947

 Score = 34.7 bits (76), Expect = 0.48
 Identities = 13/22 (59%), Positives = 19/22 (86%)
 Frame = +3

Query: 111 NGSDLPMNDIPTLRYYYNLGVE 176
           +G DLP+ DI TLR+++NLGV+
Sbjct: 315 SGMDLPLIDITTLRFFFNLGVQ 336


>UniRef50_Q5P9I1 Cluster: 1-acyl-sn-glycerol-3-phosphate
           acyltransferase; n=1; Anaplasma marginale str. St.
           Maries|Rep: 1-acyl-sn-glycerol-3-phosphate
           acyltransferase - Anaplasma marginale (strain St.
           Maries)
          Length = 241

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 292 LWFIPRSCIDICCISWAR 239
           +WFIP SC +I C+ W R
Sbjct: 39  VWFIPASCQNIACVWWTR 56


>UniRef50_Q3VPJ7 Cluster: Putative uncharacterized protein
           precursor; n=2; Chlorobium/Pelodictyon group|Rep:
           Putative uncharacterized protein precursor - Pelodictyon
           phaeoclathratiforme BU-1
          Length = 267

 Score = 31.1 bits (67), Expect = 5.9
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 266 DARPGNEPQR*PEXQA*GRPGQRQAPHEQP 355
           D+RP   P   P+ +  GRP QR  P  QP
Sbjct: 162 DSRPDGRPDGRPDFRPDGRPDQRPQPQNQP 191


>UniRef50_Q3W8J3 Cluster: Putative oxidoreductase; n=1; Frankia sp.
           EAN1pec|Rep: Putative oxidoreductase - Frankia sp.
           EAN1pec
          Length = 578

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 16/30 (53%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = -2

Query: 357 PGCSWGACRCPGRP--YACXSGQRCGSFPG 274
           PGCS G+ RCPGRP       G R G  PG
Sbjct: 204 PGCS-GSPRCPGRPGRGVAVRGDRAGRRPG 232


>UniRef50_Q6V0X3 Cluster: Membrane-associated histidine-rich
           protein; n=7; Plasmodium falciparum|Rep:
           Membrane-associated histidine-rich protein - Plasmodium
           falciparum
          Length = 257

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = +3

Query: 222 HYSPRDLAHDMQQMSMHDRGMNHNADQXHKHKGGQGND 335
           H    D  HD      HDRG +H  D  H H    G+D
Sbjct: 183 HDHGHDHGHDHGHDHGHDRGHDHGHDHGHDHGHDHGHD 220


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,941,595
Number of Sequences: 1657284
Number of extensions: 3644501
Number of successful extensions: 10269
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10118
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11941480628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)