Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30122
         (722 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    60   4e-08
UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-...    43   0.007
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    39   0.14 
UniRef50_Q7REA5 Cluster: Putative uncharacterized protein PY0516...    35   1.8  
UniRef50_A6SK84 Cluster: Predicted protein; n=1; Botryotinia fuc...    33   5.4  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 60.5 bits (140), Expect = 4e-08
 Identities = 43/91 (47%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
 Frame = -2

Query: 289 GPNDN---SRRRPKHVISDPSDPLTVLLGT*SAGHRSR*NRRFATKGSASKLTHRHSPPI 119
           GP D    SRR P HV+SDP D L+VLL   S G+     RR AT            P  
Sbjct: 25  GPRDGATKSRRHPNHVLSDPRDSLSVLLDLSSTGYCPCRVRR-ATNPKTQ-------PMK 76

Query: 118 FSPDLLSESRFRSGGRFCEALFCLGLVLATA 26
           F       SRFRS GRFCEAL  LGLVLA +
Sbjct: 77  FLAGSSQSSRFRSDGRFCEALLLLGLVLANS 107


>UniRef50_Q9XXW0 Cluster: Endonuclease and reverse
           transcriptase-like protein; n=9; cellular organisms|Rep:
           Endonuclease and reverse transcriptase-like protein -
           Bombyx mori (Silk moth)
          Length = 960

 Score = 43.2 bits (97), Expect = 0.007
 Identities = 18/29 (62%), Positives = 24/29 (82%)
 Frame = -2

Query: 271 RRRPKHVISDPSDPLTVLLGT*SAGHRSR 185
           RRRP+HV++DPSDP+T+ L T S+  RSR
Sbjct: 913 RRRPRHVLTDPSDPITLALDTFSSNTRSR 941


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 38.7 bits (86), Expect = 0.14
 Identities = 22/55 (40%), Positives = 30/55 (54%)
 Frame = -2

Query: 166 TKGSASKLTHRHSPPIFSPDLLSESRFRSGGRFCEALFCLGLVLATAKKNLISIL 2
           T G +++  HR  P  FSPDLLS SRFR+G  +   +  LG +       L+S L
Sbjct: 383 TTGHSTENEHRCCPLSFSPDLLSGSRFRTGAEY--EMLGLGTIAGNIVSPLLSAL 435


>UniRef50_Q7REA5 Cluster: Putative uncharacterized protein PY05160;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY05160 - Plasmodium yoelii
           yoelii
          Length = 262

 Score = 35.1 bits (77), Expect = 1.8
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -2

Query: 715 VEYVFH*KNWYPPARFEHQCIARYECTGRLIL*ATTTSKRLFYLIS 578
           ++   H + +Y  + F H CI  Y C+   +L   T   R++Y IS
Sbjct: 48  LQITIHPRMYYCKSLFSHVCITAYHCSAMYVLLHITVQPRMYYCIS 93


>UniRef50_A6SK84 Cluster: Predicted protein; n=1; Botryotinia
           fuckeliana B05.10|Rep: Predicted protein - Botryotinia
           fuckeliana B05.10
          Length = 179

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
 Frame = -2

Query: 355 TSKFNFHSPEPLSDFYLHSQSCGPNDNSR-RRPKHVISDPSDPLTVLLGT*SAGHRSR*N 179
           T  F++H    ++ F  HS+ C  N  SR   PK  +S  +   + ++   +AG + R +
Sbjct: 14  TQTFHYHCGHIITTFIEHSEICEWNQESRPTTPKPTLSRQATSSSAVV---NAGSKLRRS 70

Query: 178 RRFATKG---SASKLTHRHSPPIFSPDLLSESRFRSGGRFCEALF 53
             FA KG   S  KL  R S  I SP    E  F +     E LF
Sbjct: 71  ASFALKGVGNSLGKLARRVS--IRSPQPAHEFSFTARVPCPEVLF 113


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 707,641,877
Number of Sequences: 1657284
Number of extensions: 14441228
Number of successful extensions: 34741
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 33640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34727
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)