Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30100
         (740 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-...    81   4e-14
UniRef50_A3DIQ8 Cluster: O-antigen polymerase; n=1; Clostridium ...    34   3.2  
UniRef50_Q9BGU9 Cluster: Putative uncharacterized protein; n=1; ...    34   4.2  
UniRef50_Q7SEK3 Cluster: Predicted protein; n=5; Pezizomycotina|...    34   4.2  
UniRef50_Q7ZVH5 Cluster: Zgc:56010; n=2; Danio rerio|Rep: Zgc:56...    33   5.6  
UniRef50_Q7RHE6 Cluster: Putative uncharacterized protein PY0404...    33   5.6  
UniRef50_Q22N16 Cluster: KOW motif family protein; n=1; Tetrahym...    33   7.4  
UniRef50_UPI0000DBFC45 Cluster: UPI0000DBFC45 related cluster; n...    33   9.7  
UniRef50_Q6MBJ2 Cluster: Putative ABC transporter ATP-binding pr...    33   9.7  
UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    33   9.7  

>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
            protein; n=25; Arthropoda|Rep: Endonuclease and reverse
            transcriptase-like protein - Bombyx mori (Silk moth)
          Length = 986

 Score = 80.6 bits (190), Expect = 4e-14
 Identities = 37/44 (84%), Positives = 39/44 (88%)
 Frame = +1

Query: 421  RICHRTARHRSRVNPYYLELLHSSTVRFQRSFLPRTIWLWSELP 552
            R  HRTARHRSRV+PYYLE L SSTVRFQRSFLPRTI LW+ELP
Sbjct: 903  RFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELP 946


>UniRef50_A3DIQ8 Cluster: O-antigen polymerase; n=1; Clostridium
           thermocellum ATCC 27405|Rep: O-antigen polymerase -
           Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
          Length = 428

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
 Frame = +2

Query: 158 MPCI*RTHACILFIVKLLFLTSVVKLRID*KLFVFVNIFFTVVLAKFV-LIEV*NTIIIV 334
           +P I R  +  LFI+   FL  + K+RI+     F  I+F +VL  F+ +    N I   
Sbjct: 44  LPIIGRYESLALFIIS--FLLMLRKIRIEKNALTF--IYFLIVLVGFLGIFNSINIITSF 99

Query: 335 YKLTIPISYSRISTTAGPLV 394
            +L I  SY  IS TA  LV
Sbjct: 100 RELLIVASYFLISITATALV 119


>UniRef50_Q9BGU9 Cluster: Putative uncharacterized protein; n=1;
           Macaca fascicularis|Rep: Putative uncharacterized
           protein - Macaca fascicularis (Crab eating macaque)
           (Cynomolgus monkey)
          Length = 100

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
 Frame = +1

Query: 154 LHAMYLTHTRMHT---IYCQTFVLDVCCQIENRLKIVCLC*YFFYCSLGEICAY 306
           +H    THT  HT   IY  T     C  I  +   +C+C Y + C    +C Y
Sbjct: 14  VHIYIYTHTHTHTHIHIYIHTLREQSCLSIHTQSMYICVCIYMYMC----VCVY 63


>UniRef50_Q7SEK3 Cluster: Predicted protein; n=5;
           Pezizomycotina|Rep: Predicted protein - Neurospora
           crassa
          Length = 526

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 17/57 (29%), Positives = 28/57 (49%)
 Frame = -2

Query: 274 KNINKDKQFLIYSQFDNRRQEQKFDNK*YACVCASNTWHVVCVMFSLFI*CIFYALF 104
           KN +K++    +S  +N R E   D   YA VC    W ++C++  + I  I   L+
Sbjct: 266 KNNSKNQDMWGWSCVENHRAELFKDKVDYALVCRLQNWGLICMIIEIIIEIISITLY 322


>UniRef50_Q7ZVH5 Cluster: Zgc:56010; n=2; Danio rerio|Rep: Zgc:56010
           - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 256

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
 Frame = +1

Query: 94  YFFKIMHKRYIK*----IKKTLHTLHAMYLTHTRMHTIYCQTFVLDVCCQIENRLKI-VC 258
           YFF +  ++ ++     IK+     HA  L H R+H   C       C    NRL+  +C
Sbjct: 156 YFFDLWKEKMLQDTKDIIKEKRKRSHAKALAHKRLHANTCTHKCSGAC--THNRLRASIC 213

Query: 259 LC*YFFYCSLGEICAYRSI 315
            C +  +C+   +C  R +
Sbjct: 214 ACAFANFCACERLCMQRFV 232


>UniRef50_Q7RHE6 Cluster: Putative uncharacterized protein PY04041;
           n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY04041 - Plasmodium yoelii yoelii
          Length = 1521

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 18/49 (36%), Positives = 29/49 (59%)
 Frame = -2

Query: 343 KFVHYYDCILYFYKHKFRQDYSKKNINKDKQFLIYSQFDNRRQEQKFDN 197
           K+++ YDC LY  K+K R     KNI+KD+    + +F+N +   K +N
Sbjct: 570 KYINKYDC-LYCNKNKVRGGIIHKNISKDENNKGF-KFNNHKDYDKINN 616


>UniRef50_Q22N16 Cluster: KOW motif family protein; n=1; Tetrahymena
           thermophila SB210|Rep: KOW motif family protein -
           Tetrahymena thermophila SB210
          Length = 778

 Score = 33.1 bits (72), Expect = 7.4
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -2

Query: 358 TNWNCKFVHYYDCILYFYKHKFRQDYSKKNIN 263
           + + C+ +H Y  +++ +  KFR  Y+ +NIN
Sbjct: 623 SGYQCQVIHVYKSLVFLFNPKFRDTYTVENIN 654


>UniRef50_UPI0000DBFC45 Cluster: UPI0000DBFC45 related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DBFC45 UniRef100 entry -
           Rattus norvegicus
          Length = 272

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = -1

Query: 194 IVCMRVCVKYMACS-VCNVFFIHLMYLLCIILKKY*HCALLLYILYKCV 51
           + C+ +C   + C+ VC   +++++  L I L  + +  + +YI+Y CV
Sbjct: 23  LFCVYICTSIVVCTRVCLCMYMYVVMCLYICLLMHVYMYMCMYIVYLCV 71


>UniRef50_Q6MBJ2 Cluster: Putative ABC transporter ATP-binding
           protein; n=1; Candidatus Protochlamydia amoebophila
           UWE25|Rep: Putative ABC transporter ATP-binding protein
           - Protochlamydia amoebophila (strain UWE25)
          Length = 607

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = +2

Query: 188 ILFIVKLLFLTSVVKLRID*KLFVFVNIFFTVVLAKFVLIEV 313
           +L ++  LFL + + L I   +F F+N FF ++L  +V+I +
Sbjct: 141 LLTLIVQLFLPACLALMISTTMFAFINPFFALILISWVIIHM 182


>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
           moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
           hornworm)
          Length = 248

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 14/20 (70%), Positives = 14/20 (70%)
 Frame = +1

Query: 631 MSDGNHSPLDGSYARLPTRA 690
           M DGNHSP    YA LPTRA
Sbjct: 1   MGDGNHSPSGRPYASLPTRA 20


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 726,661,861
Number of Sequences: 1657284
Number of extensions: 14615398
Number of successful extensions: 36438
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 34908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36411
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)