Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00080
(317 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A5BKB8 Cluster: Putative uncharacterized protein; n=2; ... 57 9e-08
UniRef50_Q6CQE3 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 57 9e-08
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;... 47 7e-05
UniRef50_UPI0000F2EB7B Cluster: PREDICTED: similar to splicing c... 47 7e-05
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513... 44 7e-04
UniRef50_Q4W1E6 Cluster: LPS-binding protein; n=1; Suberites dom... 38 0.043
UniRef50_A6F7F6 Cluster: Putative uncharacterized protein; n=1; ... 36 0.23
UniRef50_A3B8T4 Cluster: Putative uncharacterized protein; n=2; ... 33 1.6
UniRef50_A6FSX2 Cluster: Phage terminase, large subunit, PBSX; n... 31 6.6
UniRef50_A0V8U5 Cluster: Putative uncharacterized protein; n=1; ... 31 6.6
UniRef50_Q9VXW9 Cluster: CG5877-PA, isoform A; n=3; Drosophila m... 31 6.6
UniRef50_UPI000038CDAF Cluster: COG3321: Polyketide synthase mod... 30 8.7
UniRef50_Q8IBJ1 Cluster: Ubiquitin carboxyl-terminal hydrolase, ... 30 8.7
>UniRef50_A5BKB8 Cluster: Putative uncharacterized protein; n=2;
Eukaryota|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 347
Score = 56.8 bits (131), Expect = 9e-08
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = +1
Query: 97 VGGGAWPFLVGGAICLVNSGNERDSSLL 180
+GGGAWPFLVGGAICLVNS NERD SLL
Sbjct: 1 MGGGAWPFLVGGAICLVNSVNERDLSLL 28
>UniRef50_Q6CQE3 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome D of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=3; Eukaryota|Rep: Kluyveromyces lactis strain
NRRL Y-1140 chromosome D of strain NRRL Y- 1140 of
Kluyveromyces lactis - Kluyveromyces lactis (Yeast)
(Candida sphaerica)
Length = 119
Score = 56.8 bits (131), Expect = 9e-08
Identities = 25/34 (73%), Positives = 27/34 (79%)
Frame = -1
Query: 146 TRQIAPPTKNGHAPPPTESRKSC*SVNPSGVRAW 45
+RQI PPTKNGHAPPPT+SRKS SVNP V W
Sbjct: 86 SRQITPPTKNGHAPPPTKSRKSSQSVNPYCVWTW 119
>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 493
Score = 47.2 bits (107), Expect = 7e-05
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = -2
Query: 112 MHHHPPNQERAVNLSILPVSGPG 44
MHHHP N+ERA+NLSIL VSGPG
Sbjct: 1 MHHHPQNRERAINLSILSVSGPG 23
>UniRef50_UPI0000F2EB7B Cluster: PREDICTED: similar to splicing
coactivator subunit SRm300; n=1; Monodelphis
domestica|Rep: PREDICTED: similar to splicing
coactivator subunit SRm300 - Monodelphis domestica
Length = 598
Score = 47.2 bits (107), Expect = 7e-05
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = -2
Query: 112 MHHHPPNQERAVNLSILPVSGPG 44
MHHHP N+ERA+NLSIL VSGPG
Sbjct: 1 MHHHPQNRERAINLSILSVSGPG 23
>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY05130 - Plasmodium yoelii yoelii
Length = 402
Score = 44.0 bits (99), Expect = 7e-04
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = -2
Query: 133 LHQLRTAMHHHPPNQERAVNL 71
+H+L+TAMHHHP NQERA+NL
Sbjct: 177 IHELKTAMHHHPRNQERAINL 197
Score = 34.3 bits (75), Expect = 0.53
Identities = 23/56 (41%), Positives = 29/56 (51%)
Frame = -3
Query: 171 RVSFVTGINQTNRSTN*ERPCTTTHRIKKELLICQSFRCPGLVRFPVLSQIKPQAP 4
++SFV GINQTN H +K + + + FPVLSQIKPQAP
Sbjct: 164 KISFVIGINQTNH----------IHELKTAMHHHPRNQERAINLFPVLSQIKPQAP 209
>UniRef50_Q4W1E6 Cluster: LPS-binding protein; n=1; Suberites
domuncula|Rep: LPS-binding protein - Suberites domuncula
(Sponge)
Length = 451
Score = 37.9 bits (84), Expect = 0.043
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 125 LVERFVWLIPVTNETLAC 178
LVE FVWLIP+TNETL C
Sbjct: 2 LVEGFVWLIPITNETLTC 19
>UniRef50_A6F7F6 Cluster: Putative uncharacterized protein; n=1;
Moritella sp. PE36|Rep: Putative uncharacterized protein
- Moritella sp. PE36
Length = 289
Score = 35.5 bits (78), Expect = 0.23
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +1
Query: 88 LDSVGGGAWPFL--VGGAICLVNSGNERDSSLLNRRRYLGVRGLVSRNSLTK 237
+D VGGG+W + G +ICL+N ++ + R L V+ L+S SLTK
Sbjct: 45 VDPVGGGSWIAMNQAGLSICLLNYYQQKPPEKILISRGLLVKSLISNTSLTK 96
>UniRef50_A3B8T4 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 515
Score = 32.7 bits (71), Expect = 1.6
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +1
Query: 4 WSLRLNLTQHGKSHQARTPEGLTD*QLFLDSVGGGAWPFLVGGAICLVNSGNERDSSLLN 183
W L+ NL + K HQ E + LD V + P +VGG L+ E+ + +N
Sbjct: 75 WELQYNLVKK-KVHQFERKEDFL--KEILDKVSSQSIPVMVGGDFNLIRHAEEKSNGHVN 131
Query: 184 RR 189
RR
Sbjct: 132 RR 133
>UniRef50_A6FSX2 Cluster: Phage terminase, large subunit, PBSX; n=5;
Roseobacter sp. AzwK-3b|Rep: Phage terminase, large
subunit, PBSX - Roseobacter sp. AzwK-3b
Length = 468
Score = 30.7 bits (66), Expect = 6.6
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +1
Query: 82 LFLDSVGGGAWPFLVGGAICLVNSG--NERDSSLLNRRRYLGVRGLVSRN 225
L+ + GGG L+ A+CL + G N R ++L RR + +R L+SR+
Sbjct: 35 LYGGAAGGGKSDALLVDALCLQHEGHKNPRHRAVLFRRSFPELRDLISRS 84
>UniRef50_A0V8U5 Cluster: Putative uncharacterized protein; n=1;
Delftia acidovorans SPH-1|Rep: Putative uncharacterized
protein - Delftia acidovorans SPH-1
Length = 268
Score = 30.7 bits (66), Expect = 6.6
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +1
Query: 4 WSLRLNL-TQHGKSHQARTPEGLTD*QLFLDSVGGGAWPFLVGGAICLVNSGNERDSSLL 180
WS R +L ++ G+ QA PEG L S A P V A L + G++RD
Sbjct: 14 WSFRASLLSRWGEGRQAAAPEGKA---WCLFSASAAAQPAHVAVAQHL-DHGDQRDQHGN 69
Query: 181 NRRRYLGVRGLVS 219
+++ +LGV LV+
Sbjct: 70 HQQHHLGVEALVA 82
>UniRef50_Q9VXW9 Cluster: CG5877-PA, isoform A; n=3; Drosophila
melanogaster|Rep: CG5877-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 984
Score = 30.7 bits (66), Expect = 6.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -2
Query: 142 DKSLHQLRTAMHHHPPNQE 86
++ +H L TAM HHP NQ+
Sbjct: 211 EQQIHSLETAMEHHPSNQQ 229
>UniRef50_UPI000038CDAF Cluster: COG3321: Polyketide synthase modules
and related proteins; n=1; Nostoc punctiforme PCC
73102|Rep: COG3321: Polyketide synthase modules and
related proteins - Nostoc punctiforme PCC 73102
Length = 1626
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/40 (30%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 4 WSLRLNLTQHGKSHQARTPEGLTD*Q-LFLDSVGGGAWPF 120
W ++ ++T +GK+ A P G+ + +F+D++ GG W +
Sbjct: 1293 WGIQADITTYGKAVAAGIPIGVVAGKAVFMDALDGGMWNY 1332
>UniRef50_Q8IBJ1 Cluster: Ubiquitin carboxyl-terminal hydrolase,
putative; n=2; Eukaryota|Rep: Ubiquitin carboxyl-terminal
hydrolase, putative - Plasmodium falciparum (isolate 3D7)
Length = 3183
Score = 30.3 bits (65), Expect = 8.7
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -2
Query: 247 NFNTSSVSCATRGRAHLNNDAYLAG*SLVRYRN*P-DKSLHQLRTAMHHHPPNQERAVNL 71
N+++ ++ T H + Y ++V+Y P D L Q + HHP + + L
Sbjct: 2847 NYSSYNIDSFTYKTDHTDYSNYQKHNNVVQYGQAPFDALLKQHSMLLEHHPMTENKTFCL 2906
Query: 70 SILP 59
SILP
Sbjct: 2907 SILP 2910
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 294,705,153
Number of Sequences: 1657284
Number of extensions: 5234529
Number of successful extensions: 12843
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 12416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12836
length of database: 575,637,011
effective HSP length: 82
effective length of database: 439,739,723
effective search space used: 10114013629
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -