Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00039
(423 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81; Eukary... 82 4e-15
UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33; Eukary... 69 5e-11
UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15 ... 58 6e-08
UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1; ... 56 4e-07
UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellula... 55 5e-07
UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=... 53 2e-06
UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6; Alveola... 52 6e-06
UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S riboso... 43 0.002
UniRef50_A0DBI8 Cluster: Chromosome undetermined scaffold_44, wh... 42 0.005
UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2; Cryptos... 41 0.012
UniRef50_Q2KL02 Cluster: 60S ribosomal protein L35; n=1; Siniper... 39 0.048
UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza sativa... 38 0.064
UniRef50_Q8ST62 Cluster: Similarity to 60S ribosomal protein L35... 35 0.60
UniRef50_UPI0000EBD742 Cluster: PREDICTED: similar to 60S riboso... 34 1.0
UniRef50_Q7QRA8 Cluster: GLP_2_9191_9649; n=2; Giardia intestina... 33 1.8
UniRef50_Q4S280 Cluster: Chromosome undetermined SCAF14764, whol... 33 3.2
UniRef50_Q0CI84 Cluster: Putative uncharacterized protein; n=1; ... 31 7.4
UniRef50_Q8Y3Q8 Cluster: Lmo2775 protein; n=5; Listeria|Rep: Lmo... 31 9.7
UniRef50_Q7R2E8 Cluster: GLP_623_61302_55741; n=1; Giardia lambl... 31 9.7
>UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81;
Eukaryota|Rep: 60S ribosomal protein L35 - Homo sapiens
(Human)
Length = 123
Score = 82.2 bits (194), Expect = 4e-15
Identities = 49/110 (44%), Positives = 61/110 (55%)
Frame = +3
Query: 18 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 197
M K+K +LR K + LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 198 YHQKMKVNLRNHYKNKKYKL*I*EPRRPVLCARLLLNTKQRSRRGKRSER 347
+Q K NLR YK KKYK P++ R LN + + + K+ +R
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKK-TRAMRRRLNKHEENLKTKKQQR 109
Score = 61.7 bits (143), Expect = 6e-09
Identities = 32/73 (43%), Positives = 46/73 (63%)
Frame = +2
Query: 167 KKSYRTCLHCVSPEDEGQS*KPLQKQEIQALDLRAKKTRAMRKALTKHEAKIKTRKEIRK 346
+KS L ++ + K + ++ + LDLR KKTRAMR+ L KHE +KT+K+ RK
Sbjct: 51 RKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRK 110
Query: 347 KSLFPPRVYAVKA 385
+ L+P R YAVKA
Sbjct: 111 ERLYPLRKYAVKA 123
>UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33;
Eukaryota|Rep: 60S ribosomal protein L35 -
Caenorhabditis elegans
Length = 123
Score = 68.5 bits (160), Expect = 5e-11
Identities = 38/79 (48%), Positives = 44/79 (55%)
Frame = +3
Query: 18 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 197
M K+KC LR + LRV+KVTGG ASKLSKIRVVRK IAR+ V
Sbjct: 1 MTKLKCKSLRGEKKDALQKKLDEQKTELATLRVSKVTGGAASKLSKIRVVRKNIARLLTV 60
Query: 198 YHQKMKVNLRNHYKNKKYK 254
+Q K LR Y + KYK
Sbjct: 61 INQTQKQELRKFYADHKYK 79
Score = 41.1 bits (92), Expect = 0.009
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +2
Query: 257 LDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 385
+DLR KKTRA+R+ LT HE +++ K+ K R +AVKA
Sbjct: 81 IDLRLKKTRAIRRRLTAHELSLRSAKQQAKSRNQAVRKFAVKA 123
>UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15
protein - Plasmodium falciparum
Length = 124
Score = 58.4 bits (135), Expect = 6e-08
Identities = 35/79 (44%), Positives = 42/79 (53%)
Frame = +3
Query: 18 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 197
M VK ELRT + LR++K G A K SKI VRK +ARV V
Sbjct: 1 MSNVKAYELRTLKKKELLDKLDELKKELSGLRISKALGNSA-KNSKIHGVRKNVARVLTV 59
Query: 198 YHQKMKVNLRNHYKNKKYK 254
Y+QK K+ LR YKNKK+K
Sbjct: 60 YNQKRKMELRQLYKNKKFK 78
>UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 218
Score = 55.6 bits (128), Expect = 4e-07
Identities = 31/73 (42%), Positives = 39/73 (53%)
Frame = +3
Query: 27 VKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 206
VK EL++K NLRV KV GG +SK+ +I +RK IARV V +Q
Sbjct: 77 VKTFELQSKSKTDLTKQLEELKTELLNLRVQKVAGGSSSKILRINSLRKDIARVLTVMNQ 136
Query: 207 KMKVNLRNHYKNK 245
K + NLR YK K
Sbjct: 137 KQRANLREFYKGK 149
>UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellular
organisms|Rep: 60S ribosomal protein L35 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 203
Score = 55.2 bits (127), Expect = 5e-07
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +2
Query: 167 KKSYRTCLHCVSPEDEGQS*KPLQKQEIQALDLRAKKTRAMRKALTKHEAKIKTRKEIRK 346
+KS L ++ Q + ++ LDLR + TRA+R+ LTKHEA +KT K+ +K
Sbjct: 114 RKSIARVLTVINANQRAQLRLFYKNKKYTPLDLRPRLTRALRRRLTKHEATLKTEKQRKK 173
Query: 347 KSLFPPRVYAVK 382
+ FP R YAVK
Sbjct: 174 EIHFPQRKYAVK 185
Score = 54.0 bits (124), Expect = 1e-06
Identities = 30/81 (37%), Positives = 39/81 (48%)
Frame = +3
Query: 9 TVKMGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARV 188
T+ KVK +L K + LRV K+ G +SK +I VRK+IARV
Sbjct: 61 TMSTSKVKAGQLWGKSKEELSKQLEELKTELSQLRVQKIAAGASSKTQRIHDVRKSIARV 120
Query: 189 YIVYHQKMKVNLRNHYKNKKY 251
V + + LR YKNKKY
Sbjct: 121 LTVINANQRAQLRLFYKNKKY 141
>UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=5;
Trypanosomatidae|Rep: 60S ribosomal protein L35,
putative - Leishmania major
Length = 127
Score = 53.2 bits (122), Expect = 2e-06
Identities = 32/112 (28%), Positives = 53/112 (47%)
Frame = +3
Query: 27 VKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 206
+K +LR K + LRV + TGG ++L +IR +RK+IAR+ V +Q
Sbjct: 5 MKIKDLREKSKDDLLKTLTEYKKELSQLRVVQQTGGAETRLGRIRPIRKSIARILTVLNQ 64
Query: 207 KMKVNLRNHYKNKKYKL*I*EPRRPVLCARLLLNTKQRSRRGKRSERNLSSH 362
+ NL+ Y ++K + + R L R L K+ + K S + +H
Sbjct: 65 NERSNLKMFYADRKLRCKTPKVLRTKLTHRRRLALKENEKNRKTSRQMRQAH 116
Score = 38.3 bits (85), Expect = 0.064
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2
Query: 263 LRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 382
LR K T R AL ++E KT +++R+ FP RVYAVK
Sbjct: 87 LRTKLTHRRRLALKENEKNRKTSRQMRQAHKFPKRVYAVK 126
>UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6;
Alveolata|Rep: 60S ribosomal protein L35 - Theileria
annulata
Length = 142
Score = 51.6 bits (118), Expect = 6e-06
Identities = 29/72 (40%), Positives = 37/72 (51%)
Frame = +3
Query: 24 KVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYH 203
K++ ELR K RV+KVT SKLSKI +VRKA+A+V VY+
Sbjct: 22 KLRVFELRDKSDAELLKLLDDLKQELATFRVSKVTATGTSKLSKITLVRKAVAKVLTVYN 81
Query: 204 QKMKVNLRNHYK 239
Q+ K R YK
Sbjct: 82 QRKKEEARKKYK 93
Score = 39.1 bits (87), Expect = 0.037
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +2
Query: 167 KKSYRTCLHCVSPEDEGQS*KPLQKQEIQALDLRAKKTRAMRKALTKHEAKIKTRKEIRK 346
+K+ L + + ++ K +K L+LR K TRA RK LT + +KT KE ++
Sbjct: 70 RKAVAKVLTVYNQRKKEEARKKYKKLSKTPLNLRPKLTRAKRKGLTTKQLTMKTIKERKR 129
Query: 347 KSLFPPRVYAVKA 385
P R YA+ A
Sbjct: 130 AENLPKRKYALLA 142
>UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S ribosomal
protein L35; n=1; Homo sapiens|Rep: PREDICTED: similar
to 60S ribosomal protein L35 - Homo sapiens
Length = 106
Score = 43.2 bits (97), Expect = 0.002
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +2
Query: 257 LDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 385
L LR KKTRA+R+ L+KHE + +K+ + + L P R AVKA
Sbjct: 58 LHLRPKKTRAVRRPLSKHEENLTIKKQQQSEQLSPVRKCAVKA 100
>UniRef50_A0DBI8 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=9; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_44, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 125
Score = 41.9 bits (94), Expect = 0.005
Identities = 19/42 (45%), Positives = 31/42 (73%)
Frame = +2
Query: 257 LDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 382
+DLR KKTRA+R+ LT+ E KT+++ ++ + FP R +A+K
Sbjct: 83 VDLRGKKTRAIRQRLTRSERAQKTQRQWKRLNNFPLRKFALK 124
>UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L35 -
Cryptosporidium hominis
Length = 126
Score = 40.7 bits (91), Expect = 0.012
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +3
Query: 105 NLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKY 251
+LRV + TG +KLS+I VVRK IAR+ + Q+ +LR + K+
Sbjct: 33 SLRVIQSTGTAPNKLSRINVVRKGIARILTILSQRNIKSLREKHAGSKF 81
Score = 40.7 bits (91), Expect = 0.012
Identities = 22/43 (51%), Positives = 27/43 (62%)
Frame = +2
Query: 257 LDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 385
LDLR K TRA R+ALT +AK T K +K FP R +A+ A
Sbjct: 84 LDLRKKLTRAKRRALTPQQAKKMTVKASKKALNFPKRKFAIIA 126
>UniRef50_Q2KL02 Cluster: 60S ribosomal protein L35; n=1; Siniperca
chuatsi|Rep: 60S ribosomal protein L35 - Siniperca
chuatsi (Chinese perch)
Length = 57
Score = 38.7 bits (86), Expect = 0.048
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 257 LDLRAKKTRAMRKALTKHEAKIKTRKEIRKK-SLFPPRV 370
LDLR KKTR +R+ L KHE ++T+K ++ L P++
Sbjct: 3 LDLRPKKTRVLRRRLNKHEESLRTKKTAEERPPLLDPQI 41
>UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza
sativa|Rep: Os06g0732000 protein - Oryza sativa subsp.
japonica (Rice)
Length = 290
Score = 38.3 bits (85), Expect = 0.064
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = +3
Query: 6 VTVKMGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIAR 185
VTV M ++K LR ++ + LRVA+VTGG +KLS I+ VR A+
Sbjct: 104 VTVAMARIKVDVLRGRNKAELQAQLKDLKAELSVLRVARVTGGAPNKLSNIK-VRTALRE 162
Query: 186 VY 191
Y
Sbjct: 163 AY 164
Score = 33.1 bits (72), Expect = 2.4
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 236 QKQEIQALDLRAKKTRAMRKALTKHEAKI 322
+K+ + LDLR KKT A+R+ LTKH+ +
Sbjct: 167 KKKSLLPLDLRPKKTCAIRRRLTKHQGML 195
>UniRef50_Q8ST62 Cluster: Similarity to 60S ribosomal protein L35;
n=2; Encephalitozoon cuniculi|Rep: Similarity to 60S
ribosomal protein L35 - Encephalitozoon cuniculi
Length = 122
Score = 35.1 bits (77), Expect = 0.60
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +2
Query: 260 DLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 376
+LR K R+ R+ALTK + + KTR++ + S FP ++A
Sbjct: 81 ELRPKLNRSKRRALTKTQLRRKTRRQRARMSKFPRVIFA 119
>UniRef50_UPI0000EBD742 Cluster: PREDICTED: similar to 60S ribosomal
protein L35; n=1; Bos taurus|Rep: PREDICTED: similar to
60S ribosomal protein L35 - Bos taurus
Length = 98
Score = 34.3 bits (75), Expect = 1.0
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +3
Query: 108 LRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNH 233
L + K+T V+SK SKI V K I+R+ V +Q K NLR +
Sbjct: 17 LGIIKMTSSVSSKPSKILGVCKFISRLLTVVNQTQKENLRKY 58
>UniRef50_Q7QRA8 Cluster: GLP_2_9191_9649; n=2; Giardia
intestinalis|Rep: GLP_2_9191_9649 - Giardia lamblia ATCC
50803
Length = 152
Score = 33.5 bits (73), Expect = 1.8
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +2
Query: 164 CKKSYRTCLHCVSPEDEGQS*KPLQKQEIQALDLRAKKTRAMRKALTKHEAKIKTRKEIR 343
CKK L ++ + ++ + E R + T AMR LT+ + ++ K ++
Sbjct: 79 CKKDVARVLTVINQKARDEARAAFEGAEHIPKTFRPRLTHAMRCQLTEKQKRLLPSKLMK 138
Query: 344 KKSLFPPRVYAVK 382
+K FP YAVK
Sbjct: 139 RKLQFPKLKYAVK 151
Score = 31.9 bits (69), Expect = 5.6
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +3
Query: 105 NLRVAKVTGG-VASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKY 251
+LR K T G V ++++ RV +K +ARV V +QK + R ++ ++
Sbjct: 58 SLRTMKATAGPVPERIARFRVCKKDVARVLTVINQKARDEARAAFEGAEH 107
>UniRef50_Q4S280 Cluster: Chromosome undetermined SCAF14764, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF14764, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 588
Score = 32.7 bits (71), Expect = 3.2
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 200 SPEDEGQS*KPLQKQEIQALDLRAKKTRAMRKALTKHEAKIKTRKEI 340
S ED PL+ +E+ L LR ++ A R +T + +K +KEI
Sbjct: 235 SGEDPPTPPSPLRDEELSTLQLRTRQLEARRGRITAKKVYLKNKKEI 281
>UniRef50_Q0CI84 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative
uncharacterized protein - Aspergillus terreus (strain
NIH 2624)
Length = 843
Score = 31.5 bits (68), Expect = 7.4
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +2
Query: 206 EDEGQS*KPLQKQEIQALDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVY 373
E+EG + K K ++ A D+R K R R L + + KT EIRK+ F Y
Sbjct: 759 ENEGWATKLRPKPKLTAKDVRDKGARRPRDKLLRDKQVGKTVLEIRKRGAFAGYTY 814
>UniRef50_Q8Y3Q8 Cluster: Lmo2775 protein; n=5; Listeria|Rep:
Lmo2775 protein - Listeria monocytogenes
Length = 722
Score = 31.1 bits (67), Expect = 9.7
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = -2
Query: 227 SKIDLHLLVIHNVNTCDSFSYNTDLGQFRSNSTSNFSNP 111
SK DL + +I+ N D FSY+++ G FR T N ++P
Sbjct: 507 SKEDLRVNIIYAENNQDYFSYDSNTGDFR---TGNITDP 542
>UniRef50_Q7R2E8 Cluster: GLP_623_61302_55741; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_623_61302_55741 - Giardia lamblia
ATCC 50803
Length = 1853
Score = 31.1 bits (67), Expect = 9.7
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +1
Query: 178 SHVFTLCITRR*RSILETTTKTRNTSFRFKSQEDPCYAQGSY 303
SH+ T I R + L TTT T+N SF+ +Q P + S+
Sbjct: 759 SHISTKSIFRASSTRLSTTTLTKNLSFQASTQGVPLFLDSSH 800
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 301,427,401
Number of Sequences: 1657284
Number of extensions: 4280026
Number of successful extensions: 13519
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 13029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13492
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19810951153
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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