Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00037
(386 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79; Eukary... 86 2e-16
UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88; ... 84 1e-15
UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44; Fungi... 83 2e-15
UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genom... 80 1e-14
UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=... 64 7e-10
UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiell... 64 9e-10
UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba h... 62 4e-09
UniRef50_Q9YF00 Cluster: 50S ribosomal protein L44E; n=15; Therm... 48 5e-05
UniRef50_A0RZ36 Cluster: Ribosomal protein L44E; n=1; Cenarchaeu... 46 3e-04
UniRef50_Q9HIX1 Cluster: 50S ribosomal protein L44E; n=5; Archae... 42 0.005
UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1; ... 40 0.017
UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1; ... 37 0.16
UniRef50_Q3AV77 Cluster: Possible peptidase S26 family protein; ... 35 0.47
UniRef50_P39940 Cluster: E3 ubiquitin-protein ligase RSP5; n=31;... 35 0.47
UniRef50_O59603 Cluster: 50S ribosomal protein L44E; n=15; Eurya... 35 0.47
UniRef50_Q4T3I8 Cluster: Chromosome undetermined SCAF10033, whol... 33 2.5
UniRef50_UPI0000DB703D Cluster: PREDICTED: similar to ubiquitin ... 32 3.3
UniRef50_Q5CQT1 Cluster: Large low complexity protein with signa... 32 3.3
UniRef50_Q17E08 Cluster: Putative uncharacterized protein; n=1; ... 32 3.3
UniRef50_Q620M3 Cluster: Putative uncharacterized protein CBG027... 32 4.4
UniRef50_Q6XLV7 Cluster: FirrV-1-E5; n=1; Feldmannia irregularis... 31 5.8
UniRef50_Q0V3K3 Cluster: Predicted protein; n=1; Phaeosphaeria n... 31 5.8
UniRef50_Q01W43 Cluster: Peptidase M50; n=1; Solibacter usitatus... 31 7.7
UniRef50_Q4Z720 Cluster: PfAARP2 protein, putative; n=3; Plasmod... 31 7.7
>UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79;
Eukaryota|Rep: 60S ribosomal protein L44 -
Caenorhabditis elegans
Length = 105
Score = 86.2 bits (204), Expect = 2e-16
Identities = 43/82 (52%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = +2
Query: 23 MVNVPKQRRTYXXXXXXXXXXXE-SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXX 199
MVNVPK RRT+ + +QYKK KE AQGRRRYDRKQ G+GGQ+KPIF
Sbjct: 1 MVNVPKARRTFCDGKCRKHTNHKVTQYKKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKK 60
Query: 200 XXXXXXIVLRLECADCKVNHRL 265
IVLR+EC +CK +L
Sbjct: 61 AKTTKKIVLRMECTECKHKKQL 82
Score = 46.4 bits (105), Expect = 2e-04
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = +1
Query: 253 ESQVALKRCKHFELGGDKKRKGQMIQF 333
+ Q+ +KRCKHFELGG KK +GQ+IQF
Sbjct: 79 KKQLPIKRCKHFELGGQKKSRGQVIQF 105
>UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88;
Eukaryota|Rep: 60S ribosomal protein L36a-like - Homo
sapiens (Human)
Length = 106
Score = 83.8 bits (198), Expect = 1e-15
Identities = 41/74 (55%), Positives = 46/74 (62%)
Frame = +2
Query: 23 MVNVPKQRRTYXXXXXXXXXXXESQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 202
MVNVPK RRT+ +QYKK K+ AQGRRRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 203 XXXXXIVLRLECAD 244
IVLRLEC +
Sbjct: 61 KTTKKIVLRLECVE 74
Score = 52.4 bits (120), Expect = 3e-06
Identities = 21/29 (72%), Positives = 26/29 (89%)
Frame = +1
Query: 247 QGESQVALKRCKHFELGGDKKRKGQMIQF 333
+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 78 RSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36a -
Homo sapiens (Human)
Length = 106
Score = 82.6 bits (195), Expect = 2e-15
Identities = 40/74 (54%), Positives = 46/74 (62%)
Frame = +2
Query: 23 MVNVPKQRRTYXXXXXXXXXXXESQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 202
MVNVPK RRT+ +QYKK K+ AQG+RRYDRKQ GYGGQ+KPIF
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 203 XXXXXIVLRLECAD 244
IVLRLEC +
Sbjct: 61 KTTKKIVLRLECVE 74
Score = 52.4 bits (120), Expect = 3e-06
Identities = 21/29 (72%), Positives = 26/29 (89%)
Frame = +1
Query: 247 QGESQVALKRCKHFELGGDKKRKGQMIQF 333
+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 78 RSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genome
shotgun sequence; n=9; Eukaryota|Rep: Chromosome chr1
scaffold_5, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 151
Score = 80.2 bits (189), Expect = 1e-14
Identities = 39/77 (50%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Frame = +2
Query: 26 VNVPKQRRTYXXXXXXXXXXXE--SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXX 199
VNVPK ++TY +QYKK K+ AAQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 48 VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKK 107
Query: 200 XXXXXXIVLRLECADCK 250
IVLRL+C CK
Sbjct: 108 AKTTKKIVLRLQCQGCK 124
Score = 39.9 bits (89), Expect = 0.017
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1
Query: 256 SQVALKRCKHFELGGDKKRKG 318
SQ +KRCKHFE+GGDKK KG
Sbjct: 127 SQHPIKRCKHFEIGGDKKGKG 147
>UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=1;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L44,
putative - Trichomonas vaginalis G3
Length = 104
Score = 64.5 bits (150), Expect = 7e-10
Identities = 31/76 (40%), Positives = 41/76 (53%)
Frame = +2
Query: 23 MVNVPKQRRTYXXXXXXXXXXXESQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 202
MV+ PK ++ + SQ + +ERH+A GRRRYDRKQ+G+GG+ KPI
Sbjct: 1 MVHHPKTKKFFCKFCKKHTMCKVSQASRGEERHSALGRRRYDRKQKGFGGRVKPILRRSK 60
Query: 203 XXXXXIVLRLECADCK 250
I LR C CK
Sbjct: 61 KTSKKISLRFTCQSCK 76
>UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiella
natans|Rep: Ribosomal protein L44 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 99
Score = 64.1 bits (149), Expect = 9e-10
Identities = 30/76 (39%), Positives = 39/76 (51%)
Frame = +2
Query: 23 MVNVPKQRRTYXXXXXXXXXXXESQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXX 202
MV P+ ++ Y +YK K AQG+RRYDRKQQGYGGQ+KP+F
Sbjct: 1 MVKYPRNQKKYCKFCKVHVEMKSYEYKPGKASLNAQGKRRYDRKQQGYGGQTKPVFRKQV 60
Query: 203 XXXXXIVLRLECADCK 250
++L C CK
Sbjct: 61 KNTKKPSIKLSCEICK 76
>UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba
histolytica|Rep: Ribosomal protein L44 - Entamoeba
histolytica
Length = 80
Score = 62.1 bits (144), Expect = 4e-09
Identities = 27/57 (47%), Positives = 36/57 (63%)
Frame = +2
Query: 95 QYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVNHRL 265
QYKK K+ QG+RRYDRKQQG+GGQ+KP+F + ++EC CK+ L
Sbjct: 9 QYKKGKDSLHVQGKRRYDRKQQGFGGQTKPVFKKKAKQQRRL-FKIECTKCKIAQSL 64
>UniRef50_Q9YF00 Cluster: 50S ribosomal protein L44E; n=15;
Thermoprotei|Rep: 50S ribosomal protein L44E - Aeropyrum
pernix
Length = 95
Score = 48.4 bits (110), Expect = 5e-05
Identities = 26/71 (36%), Positives = 32/71 (45%)
Frame = +2
Query: 35 PKQRRTYXXXXXXXXXXXESQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXX 214
PK+ RTY +QY+ K R A G RRY RKQ+GYG Q +P
Sbjct: 4 PKRIRTYCPRCNTHTEHRVAQYRAGKRRAMALGERRYRRKQEGYGSQRRPEQKRFAKVTK 63
Query: 215 XIVLRLECADC 247
VL + C C
Sbjct: 64 KQVLVITCTVC 74
>UniRef50_A0RZ36 Cluster: Ribosomal protein L44E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L44E - Cenarchaeum
symbiosum
Length = 93
Score = 45.6 bits (103), Expect = 3e-04
Identities = 25/72 (34%), Positives = 30/72 (41%)
Frame = +2
Query: 35 PKQRRTYXXXXXXXXXXXESQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXX 214
PKQ R Y S YK K R +A G RR+ ++GYGGQ P
Sbjct: 4 PKQIRRYCPKCKKHTTQKVSIYKAGKRRASAIGERRHAEDKKGYGGQKFPKLAKPAKVTK 63
Query: 215 XIVLRLECADCK 250
+ L C DCK
Sbjct: 64 KVTRLLTCPDCK 75
>UniRef50_Q9HIX1 Cluster: 50S ribosomal protein L44E; n=5;
Archaea|Rep: 50S ribosomal protein L44E - Thermoplasma
acidophilum
Length = 93
Score = 41.5 bits (93), Expect = 0.005
Identities = 22/74 (29%), Positives = 31/74 (41%)
Frame = +2
Query: 26 VNVPKQRRTYXXXXXXXXXXXESQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXX 205
+ +PK+ TY + +K K G+RR+ R GYGG +P F
Sbjct: 1 MKMPKKIMTYCPYCKKHTSHSVERVRKRKASELKAGQRRFRRVTSGYGGFPRPKFEGREK 60
Query: 206 XXXXIVLRLECADC 247
I LRL C +C
Sbjct: 61 PTKRIALRLVCDEC 74
>UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 89
Score = 39.9 bits (89), Expect = 0.017
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1
Query: 256 SQVALKRCKHFELGGDKKRKG 318
SQ +KRCKHFE+GGDKK KG
Sbjct: 65 SQHPIKRCKHFEIGGDKKGKG 85
>UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 76
Score = 36.7 bits (81), Expect = 0.16
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 13/57 (22%)
Frame = +1
Query: 187 LQKEGKNH*ENCAPS*VCRLQGE-------------SQVALKRCKHFELGGDKKRKG 318
L KNH E+CA + + +LQ +++RCKHFE+GGDKK KG
Sbjct: 16 LSPTSKNHQEDCAEAAMPKLQALLPAPHQDVLDAHLHNYSVQRCKHFEIGGDKKGKG 72
>UniRef50_Q3AV77 Cluster: Possible peptidase S26 family protein;
n=2; Synechococcus|Rep: Possible peptidase S26 family
protein - Synechococcus sp. (strain CC9902)
Length = 127
Score = 35.1 bits (77), Expect = 0.47
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +3
Query: 96 STKSPRKGTLPRVEDVMIVNSRVTVVSPNPSSKRRQKPLRKL 221
ST S + G +PR + +V SRVT NPS+K QK +L
Sbjct: 80 STDSRQLGPIPRSALIGVVTSRVTPAKKNPSTKTNQKSQNQL 121
>UniRef50_P39940 Cluster: E3 ubiquitin-protein ligase RSP5; n=31;
Dikarya|Rep: E3 ubiquitin-protein ligase RSP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 809
Score = 35.1 bits (77), Expect = 0.47
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 39 NSAGRTAKNVNATKYTRNHSTKSPRKGTLPRVEDVM 146
N++ T N ++T TRNHST P +GT VE +
Sbjct: 158 NTSSTTRTNGHSTSSTRNHSTSHPSRGTAQAVESTL 193
>UniRef50_O59603 Cluster: 50S ribosomal protein L44E; n=15;
Euryarchaeota|Rep: 50S ribosomal protein L44E -
Pyrococcus horikoshii
Length = 94
Score = 35.1 bits (77), Expect = 0.47
Identities = 21/75 (28%), Positives = 29/75 (38%)
Frame = +2
Query: 35 PKQRRTYXXXXXXXXXXXESQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXXXXXXX 214
PKQ RTY + K+ + G+RR+ R +GYGG +P
Sbjct: 4 PKQIRTYCPYCKRHTIHKVERVKRRPRSELSAGQRRFRRVLKGYGGFPRPKPEGREKPVK 63
Query: 215 XIVLRLECADCKVNH 259
+ LR C C H
Sbjct: 64 KLDLRFVCTVCGRAH 78
>UniRef50_Q4T3I8 Cluster: Chromosome undetermined SCAF10033, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF10033,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 1494
Score = 32.7 bits (71), Expect = 2.5
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = -1
Query: 233 QDGAQFS*WFLPSF*RWVWTDHRNPAVYDHNVFYPGQRAFPWTFCTVIPCVL 78
++G F P W+W D+ N + D N+F F W C+ IP L
Sbjct: 49 ENGKDFRFDVSPDLLEWIWHDN-NQFLQDKNIFEHTYFGFMWQLCSSIPSSL 99
>UniRef50_UPI0000DB703D Cluster: PREDICTED: similar to ubiquitin
specific protease 34; n=1; Apis mellifera|Rep: PREDICTED:
similar to ubiquitin specific protease 34 - Apis
mellifera
Length = 3414
Score = 32.3 bits (70), Expect = 3.3
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -1
Query: 185 WVWTDHRNPAVYDHNVFYPGQRAFPWTFCTVIPCVLCGIYIFCSTSCAVLVRSPFLSSF 9
W+W D+ + + D N+F F W C IP L I + A L S F+ +F
Sbjct: 2236 WIWQDNMH-FLQDKNIFEHTYFTFMWQICGYIPQTLFSIQSDITEMSADLSTSFFMETF 2293
>UniRef50_Q5CQT1 Cluster: Large low complexity protein with signal
peptide, within large locus of signal peptide containing
proteins; n=3; Cryptosporidium|Rep: Large low complexity
protein with signal peptide, within large locus of
signal peptide containing proteins - Cryptosporidium
parvum Iowa II
Length = 2929
Score = 32.3 bits (70), Expect = 3.3
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = +3
Query: 36 QNSAGRTAKNVNATKYTRNHSTKSPRKGTLPRVEDVMIVNSRVTVVSPNPSSKR 197
+ S G ++N N + + HS + P+K LP+ ++ + + + +P +KR
Sbjct: 357 ETSEGEVSENENGKRNNKRHSKRRPKKPKLPKKWEIFTDDEKQEWLDRHPRTKR 410
>UniRef50_Q17E08 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 594
Score = 32.3 bits (70), Expect = 3.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 104 FCTVIPCVLCGIYIFCSTSC 45
F T+IPC C + +FCST C
Sbjct: 244 FLTLIPCKCCTVTMFCSTKC 263
>UniRef50_Q620M3 Cluster: Putative uncharacterized protein CBG02733;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG02733 - Caenorhabditis
briggsae
Length = 1157
Score = 31.9 bits (69), Expect = 4.4
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = +3
Query: 75 TKYTRN--HSTKSPRKGTLPRVEDVMIVNSRVTVVSP---NPSSKRRQKPLRKLCSVL 233
T+YTR +T + KG +PR ED +++ + V+SP + S+ R L KL L
Sbjct: 212 TQYTRTTKKTTYTISKGVIPRYEDPVVLRKQTRVMSPHYFSTSNLHRNDELPKLSETL 269
>UniRef50_Q6XLV7 Cluster: FirrV-1-E5; n=1; Feldmannia irregularis
virus a|Rep: FirrV-1-E5 - Feldmannia irregularis virus a
Length = 128
Score = 31.5 bits (68), Expect = 5.8
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +3
Query: 84 TRNHSTKSPRKGTLPRVEDVMIVNSRVTVVSPNPSSKRR 200
TR+ +TKS R +P + +M R+ +++ PS+K+R
Sbjct: 4 TRSMATKSRRTAPMPTYDQLMAHAKRIALITKPPSAKKR 42
>UniRef50_Q0V3K3 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 2460
Score = 31.5 bits (68), Expect = 5.8
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +3
Query: 45 AGRTAKNVNATKYTRNHSTKSPRKGTLPRVEDVMIVNSRVTVVSPNPSSKRR 200
A RT ++ NA +SPR +LPR D IV+ SP +RR
Sbjct: 1853 ADRTLESENADLPAPEPIVESPRDESLPRERDFAIVDGPAVESSPREKQRRR 1904
>UniRef50_Q01W43 Cluster: Peptidase M50; n=1; Solibacter usitatus
Ellin6076|Rep: Peptidase M50 - Solibacter usitatus
(strain Ellin6076)
Length = 321
Score = 31.1 bits (67), Expect = 7.7
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 182 VWTDHRNPAVYDHNVFYPGQRAFPW 108
+W R+P++YD + PG+R W
Sbjct: 277 LWLGRRHPSIYDSTILSPGRRKLGW 301
>UniRef50_Q4Z720 Cluster: PfAARP2 protein, putative; n=3; Plasmodium
(Vinckeia)|Rep: PfAARP2 protein, putative - Plasmodium
berghei
Length = 825
Score = 31.1 bits (67), Expect = 7.7
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +3
Query: 69 NATKYTRNHSTKSPRKGTLPRVEDVMIVNSRVTVVSPNPSSKRRQKPLRKLCSVLSV 239
N K+ N S + +K R + M+ S++ +S ++K + +R LC LSV
Sbjct: 175 NMDKFKDNKSIRKRKKKINKRFSEEMVEGSKIFFLSGIQNNKYNKTEIRNLCKFLSV 231
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 351,957,711
Number of Sequences: 1657284
Number of extensions: 6474343
Number of successful extensions: 17102
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 16695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17096
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15718494179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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