Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10b08r
         (739 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DA36C6 Cluster: PREDICTED: similar to absent in ...    33   9.7  
UniRef50_Q3K4H7 Cluster: Putative uncharacterized protein precur...    33   9.7  
UniRef50_A0TLM7 Cluster: Putative uncharacterized protein; n=2; ...    33   9.7  
UniRef50_O29498 Cluster: Putative uncharacterized protein; n=1; ...    33   9.7  

>UniRef50_UPI0000DA36C6 Cluster: PREDICTED: similar to absent in
            melanoma 1; n=4; Murinae|Rep: PREDICTED: similar to
            absent in melanoma 1 - Rattus norvegicus
          Length = 3038

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = -3

Query: 203  QCVYRNDCRTDNVTCGIPEASIR*AHRLCYRFGSASLSV-CLSICVSRWLLLVEA 42
            QCV      TD  +CG P A +R    + Y F   S+S+  L  C  R L L +A
Sbjct: 2786 QCVLEEGLYTDLTSCGCPSARVRALKPIDYFFEEPSISLFALEHCEGRELHLEDA 2840


>UniRef50_Q3K4H7 Cluster: Putative uncharacterized protein
           precursor; n=1; Pseudomonas fluorescens PfO-1|Rep:
           Putative uncharacterized protein precursor - Pseudomonas
           fluorescens (strain PfO-1)
          Length = 127

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 15/24 (62%), Positives = 16/24 (66%)
 Frame = -3

Query: 221 LCACGAQCVYRNDCRTDNVTCGIP 150
           L AC AQ VYRND    N TCG+P
Sbjct: 14  LTACAAQRVYRNDVYLQN-TCGVP 36


>UniRef50_A0TLM7 Cluster: Putative uncharacterized protein; n=2;
           Burkholderia cepacia complex|Rep: Putative
           uncharacterized protein - Burkholderia ambifaria MC40-6
          Length = 493

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
 Frame = -1

Query: 421 RSHELRGP---QPPRHIVILFREWRVNRTKQNVDSPAVQPCAQTH 296
           R HE  G    + PRH V+  REWR  R  Q  D    +P  Q H
Sbjct: 75  RGHERDGDDRQREPRHHVVGGREWRARRLDQPRDDELPEPAEQHH 119


>UniRef50_O29498 Cluster: Putative uncharacterized protein; n=1;
           Archaeoglobus fulgidus|Rep: Putative uncharacterized
           protein - Archaeoglobus fulgidus
          Length = 959

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +2

Query: 26  CVRSSRPLLVITSDSHR*T-DRQTDWRSQTCNRACV 130
           C+ ++RPL+++ +D    T D+  D+ + TC   CV
Sbjct: 700 CINNTRPLMILLTDGETTTCDKNEDYFNNTCKNKCV 735


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 789,075,236
Number of Sequences: 1657284
Number of extensions: 17111872
Number of successful extensions: 49307
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 46292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49265
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)