Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0137
         (508 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CB634 Cluster: hypothetical protein TTHERM_0044...    32   8.6  
UniRef50_A5Z5P3 Cluster: Putative uncharacterized protein; n=1; ...    32   8.6  
UniRef50_Q5QGK2 Cluster: Putative uncharacterized protein; n=3; ...    32   8.6  
UniRef50_O97264 Cluster: Putative uncharacterized protein MAL3P5...    32   8.6  

>UniRef50_UPI00006CB634 Cluster: hypothetical protein TTHERM_00444610;
            n=1; Tetrahymena thermophila SB210|Rep: hypothetical
            protein TTHERM_00444610 - Tetrahymena thermophila SB210
          Length = 2463

 Score = 31.9 bits (69), Expect = 8.6
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
 Frame = -1

Query: 349  KNYIQNKIQYTSNDLDELLFLGMYYE--KKKFH*SIIDGVKSIKMR*KYIFTYLLLNSLT 176
            KN++QNKI++T   L +L  LG Y +   K  H  I+D + S ++    I++   LN L 
Sbjct: 1478 KNHLQNKIEFT---LVDLFLLGKYEDLINKYHHIEILDRINSFEIC-LMIYSLKQLNQLE 1533

Query: 175  K 173
            K
Sbjct: 1534 K 1534


>UniRef50_A5Z5P3 Cluster: Putative uncharacterized protein; n=1;
           Eubacterium ventriosum ATCC 27560|Rep: Putative
           uncharacterized protein - Eubacterium ventriosum ATCC
           27560
          Length = 132

 Score = 31.9 bits (69), Expect = 8.6
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 7/45 (15%)
 Frame = +1

Query: 307 SRSMYTVFY-FEYNFFSKYDALVWLVH------FVLYCSIVFPYV 420
           S   YTV Y F YN F+ +  LVW++       F++ C+I+  +V
Sbjct: 76  STHKYTVIYIFSYNCFTNFTTLVWIIALNNFSVFIIACAIINTFV 120


>UniRef50_Q5QGK2 Cluster: Putative uncharacterized protein; n=3;
           root|Rep: Putative uncharacterized protein - Mycoplasma
           phage phiMFV1
          Length = 104

 Score = 31.9 bits (69), Expect = 8.6
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = -3

Query: 272 KKKVSLINHRWR*INKNALKIYLYLPIT*QSYK---TELRNFFFVWFLNT 132
           KK +SL       I KN    +LY+PI  Q YK    +L++  F+WF +T
Sbjct: 40  KKVISLYKKTLEEIKKNEKYDWLYVPIKSQIYKFADHDLKSDIFLWFSHT 89


>UniRef50_O97264 Cluster: Putative uncharacterized protein
           MAL3P5.11; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein MAL3P5.11 - Plasmodium
           falciparum (isolate 3D7)
          Length = 611

 Score = 31.9 bits (69), Expect = 8.6
 Identities = 13/46 (28%), Positives = 27/46 (58%)
 Frame = +1

Query: 223 FLLI*RHL*LINETFFFHNTFLKTIIRLSRSMYTVFYFEYNFFSKY 360
           F++I R   ++N   FF   ++K ++   +S+ T+++  + FF KY
Sbjct: 506 FIIIFRIFVILNIPIFFFILYIKFVLISDKSIITLYFLFFQFFYKY 551


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 438,111,998
Number of Sequences: 1657284
Number of extensions: 8021091
Number of successful extensions: 17492
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17482
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)