Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30060
(423 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q2F695 Cluster: Glycosyl-phosphatidyl-inositol-anchored... 155 4e-37
UniRef50_Q3Y125 Cluster: Putative uncharacterized protein; n=1; ... 35 0.79
UniRef50_A7D6E9 Cluster: UspA domain protein; n=1; Halorubrum la... 34 1.4
UniRef50_Q0V538 Cluster: Predicted protein; n=1; Phaeosphaeria n... 33 2.4
UniRef50_P54122 Cluster: UPF0036 protein Cgl1970/cg2160; n=31; A... 33 2.4
UniRef50_Q6CCA2 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 33 3.2
UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1; ... 32 4.2
UniRef50_UPI0000E8216B Cluster: PREDICTED: hypothetical protein;... 32 5.6
UniRef50_Q9CVR5 Cluster: Adult male testis cDNA, RIKEN full-leng... 32 5.6
UniRef50_Q13L61 Cluster: Putative membrane glycoprotein; n=1; Bu... 32 5.6
UniRef50_Q5Z7I3 Cluster: Putative uncharacterized protein OSJNBa... 32 5.6
UniRef50_Q234L5 Cluster: MRNA capping enzyme, large subunit fami... 32 5.6
UniRef50_A7SB40 Cluster: Predicted protein; n=3; Fungi/Metazoa g... 32 5.6
UniRef50_Q55IY7 Cluster: Putative uncharacterized protein; n=3; ... 32 5.6
UniRef50_UPI0000E4975F Cluster: PREDICTED: hypothetical protein;... 31 7.4
UniRef50_UPI0000DA260D Cluster: PREDICTED: hypothetical protein;... 31 7.4
UniRef50_Q58997 Cluster: Homoserine dehydrogenase; n=6; Euryarch... 31 7.4
UniRef50_UPI0001552A01 Cluster: PREDICTED: similar to High mobil... 31 9.7
UniRef50_Q1YHL7 Cluster: Putative methyl-accepting chemotaxis pr... 31 9.7
UniRef50_A6CGK9 Cluster: Putative uncharacterized protein; n=1; ... 31 9.7
UniRef50_A1SUB8 Cluster: Putative uncharacterized protein; n=1; ... 31 9.7
UniRef50_Q00VF6 Cluster: Chromosome 15 contig 1, DNA sequence; n... 31 9.7
UniRef50_Q4QBD2 Cluster: Putative uncharacterized protein; n=3; ... 31 9.7
UniRef50_A7SDQ1 Cluster: Predicted protein; n=1; Nematostella ve... 31 9.7
UniRef50_Q46C01 Cluster: Putative uncharacterized protein; n=1; ... 31 9.7
>UniRef50_Q2F695 Cluster: Glycosyl-phosphatidyl-inositol-anchored
protein; n=1; Bombyx mori|Rep:
Glycosyl-phosphatidyl-inositol-anchored protein - Bombyx
mori (Silk moth)
Length = 615
Score = 155 bits (376), Expect = 4e-37
Identities = 74/113 (65%), Positives = 74/113 (65%)
Frame = +3
Query: 12 SPVTDKEDDCRKDGPSPELENGGDRKGDSQSXXXXXXXXXXXXXXXXXXXXAFPXXXXXX 191
SPVTDKEDDCRKDGPSPELENGGDRKGDSQS AFP
Sbjct: 454 SPVTDKEDDCRKDGPSPELENGGDRKGDSQSRYRRFGRGGRGAPNGHRGRGAFPNRQGGD 513
Query: 192 XXXXXXXXXXXXXSNREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAHHA 350
SNREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAHHA
Sbjct: 514 GYRGRQGGDYQNRSNREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAHHA 566
>UniRef50_Q3Y125 Cluster: Putative uncharacterized protein; n=1;
Enterococcus faecium DO|Rep: Putative uncharacterized
protein - Enterococcus faecium DO
Length = 260
Score = 34.7 bits (76), Expect = 0.79
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = -2
Query: 254 VLKSFPVRSVLVITTLSAPIAVTALTIRESASAAMT 147
VLK FPV +L++ TLS P+A+T +T S S ++
Sbjct: 151 VLKVFPVLLLLILATLSVPVALTFITRSTSVSLLLS 186
>UniRef50_A7D6E9 Cluster: UspA domain protein; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: UspA domain protein -
Halorubrum lacusprofundi ATCC 49239
Length = 172
Score = 33.9 bits (74), Expect = 1.4
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +1
Query: 79 ATVRETPRVDTDVSVAAAEAHRTVIAAEALSLIVKAVTAIGADKVVITKTDRTG-KDFKT 255
A + V ++ A + V+ E +++I A++ +GAD VV+ RTG +
Sbjct: 61 AAEKRVETVTAELEAAGVDVIGNVVRGEPINVIENAISDVGADIVVMPSHTRTGLQRVLL 120
Query: 256 DNMTATKIGMRTVPVAT 306
++T + + VPV T
Sbjct: 121 GSVTEKVVRVSPVPVVT 137
>UniRef50_Q0V538 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 413
Score = 33.1 bits (72), Expect = 2.4
Identities = 37/130 (28%), Positives = 51/130 (39%), Gaps = 8/130 (6%)
Frame = +1
Query: 1 AAAVRP*PIKKTIAEKM---DRVQS*RTVATVRETPRVDTDVSVAAAEAHRTVIAAEALS 171
+ A +P P+ KT+A D + A VR+ PR + A + A +
Sbjct: 45 STATKPTPVMKTVATATTATDAAAAAAAAAPVRKAPRKLNAAGTSTPTAAQPKAPVPAKA 104
Query: 172 LIVKAVTAIGADK---VVITKTDRTGKDFKTDNMTATK--IGMRTVPVATDIMATVTCQK 336
VKA T +G K V +K T K TATK +G + P A T T +K
Sbjct: 105 TPVKARTPLGTQKTLPVGSSKPAATSTPVKKTPATATKTPVGSASKPTALK-KDTPTAEK 163
Query: 337 VHITPRTVVS 366
P V S
Sbjct: 164 KTTIPPAVKS 173
>UniRef50_P54122 Cluster: UPF0036 protein Cgl1970/cg2160; n=31;
Actinobacteria (class)|Rep: UPF0036 protein
Cgl1970/cg2160 - Corynebacterium glutamicum
(Brevibacterium flavum)
Length = 718
Score = 33.1 bits (72), Expect = 2.4
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Frame = +3
Query: 234 NREGFQNRQYDGYQNRHA---NRTGGDGYYGNGDVSEGAHH 347
N +G QNR+ G NR+ NR GG G G+G+ +EGA++
Sbjct: 70 NAQGSQNRE-SGNNNRNRSNNNRRGGRGRRGSGNANEGANN 109
>UniRef50_Q6CCA2 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 911
Score = 32.7 bits (71), Expect = 3.2
Identities = 38/121 (31%), Positives = 48/121 (39%), Gaps = 7/121 (5%)
Frame = +1
Query: 73 TVATVRETPRVDTDVSVAAAEAHRTVIAAE---ALSLIVKAVTAI----GADKVVITKTD 231
T AT + TD++ A T A A L V T + D V T TD
Sbjct: 577 TTATATDLTTTVTDLTTTATALMETATALTVPTATDLTVPTATDLTVPTATDLTVPTVTD 636
Query: 232 RTGKDFKTDNMTATKIGMRTVPVATDIMATVTCQKVHITPRTVVSGMEKATASREDTRDA 411
T TD +T + TVP TD+ T T +T TV + ME ATA T A
Sbjct: 637 LTVPTV-TD-LTVPTVTALTVPTVTDLTTTAT----DLTVPTVTALMETATALMVPTATA 690
Query: 412 V 414
+
Sbjct: 691 L 691
>UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia phytofirmans PsJN|Rep: Putative
uncharacterized protein - Burkholderia phytofirmans PsJN
Length = 753
Score = 32.3 bits (70), Expect = 4.2
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = -1
Query: 372 HTAHDRSRRDVHLLTRHRCHNIR---RHRYGSHAY 277
H HDR RD H RHR H+ R RHR+G H +
Sbjct: 530 HRHHDRHHRDRHRHDRHR-HDRRLHDRHRHGHHRH 563
>UniRef50_UPI0000E8216B Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 279
Score = 31.9 bits (69), Expect = 5.6
Identities = 23/71 (32%), Positives = 40/71 (56%)
Frame = -2
Query: 356 VLGVMCTF*HVTVAIISVATGTVRMPILVAVILSVLKSFPVRSVLVITTLSAPIAVTALT 177
V+ VM T VA+++V TV + ++VAV+ V V V V+T ++ +AV +T
Sbjct: 22 VVAVMVTEMVAVVALVTVVAVTV-VAVMVAVVALVALVAVVALVTVVTVVAVMVAV-VVT 79
Query: 176 IRESASAAMTV 144
+ +A + +TV
Sbjct: 80 VMVTAVSVVTV 90
>UniRef50_Q9CVR5 Cluster: Adult male testis cDNA, RIKEN full-length
enriched library, clone:1700062G21 product:hypothetical
protein, full insert sequence; n=1; Mus musculus|Rep:
Adult male testis cDNA, RIKEN full-length enriched
library, clone:1700062G21 product:hypothetical protein,
full insert sequence - Mus musculus (Mouse)
Length = 141
Score = 31.9 bits (69), Expect = 5.6
Identities = 18/32 (56%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -3
Query: 94 SPLRSP-PFSNSGLGPSFLQSSSLSVTGERRP 2
SP P P SGLG FL SSL TG+RRP
Sbjct: 68 SPRAGPAPSPCSGLGSPFLSPSSLLPTGKRRP 99
>UniRef50_Q13L61 Cluster: Putative membrane glycoprotein; n=1;
Burkholderia xenovorans LB400|Rep: Putative membrane
glycoprotein - Burkholderia xenovorans (strain LB400)
Length = 655
Score = 31.9 bits (69), Expect = 5.6
Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Frame = +1
Query: 94 TPRVDTDVSVAAAEAHRTVI-AAEALSLIVKAVTAIGADKVVITKTDRTGKDFKTDNMTA 270
T V T V V A A ++ AA A++++V AVT A + T T TA
Sbjct: 108 TATVATAVMVTVATATAVMVTAATAMAVMVTAVTVTVATATAVMVTAATATAVMVTVATA 167
Query: 271 TKIGMRTVPVATDIMAT-VTCQKVHITPRTVVSGM 372
T + M T A +M T T V +T T + M
Sbjct: 168 TAV-MVTAATAMAVMVTAATATAVMVTVVTATAVM 201
>UniRef50_Q5Z7I3 Cluster: Putative uncharacterized protein
OSJNBa0016D02.41; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBa0016D02.41 - Oryza sativa subsp. japonica (Rice)
Length = 88
Score = 31.9 bits (69), Expect = 5.6
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +1
Query: 106 DTDVSVAAAEAHRTVIAAEALSLIVKAVTAIGADKVVITKTDRTGKDFKTDNMTAT 273
D V A EA TV+ AE ++ V+A A + VV T G+D T+ ++AT
Sbjct: 13 DVAVEGVALEAEATVVEAEKVAAAVRAKKAATSAVVVRTNKVSVGEDGCTNTVSAT 68
>UniRef50_Q234L5 Cluster: MRNA capping enzyme, large subunit family
protein; n=1; Tetrahymena thermophila SB210|Rep: MRNA
capping enzyme, large subunit family protein -
Tetrahymena thermophila SB210
Length = 702
Score = 31.9 bits (69), Expect = 5.6
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 231 SNREGFQNRQYDGYQNRHANRTGGDGYYG-NGDVSEGAHH 347
S+R G NR+ GY N+ + GD Y+G +G HH
Sbjct: 91 SDRRGGDNRRGGGYGNKDRYASSGDNYHGSHGGSGTNNHH 130
>UniRef50_A7SB40 Cluster: Predicted protein; n=3; Fungi/Metazoa
group|Rep: Predicted protein - Nematostella vectensis
Length = 655
Score = 31.9 bits (69), Expect = 5.6
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Frame = -2
Query: 320 VAIISVATGTVRMPILVAVILSVLKSFPVRSVLVIT---TLSAPIAVTALTIRESASAAM 150
VA+ V + ++VAV ++V+ + V V+V+T T++ A ++T+ +AS A+
Sbjct: 297 VAVAVAVAVAVAVAVVVAVAVAVVVAVAVAVVVVVTVAVTVAVAAAAVSVTVTVTASVAV 356
Query: 149 TV 144
TV
Sbjct: 357 TV 358
>UniRef50_Q55IY7 Cluster: Putative uncharacterized protein; n=3;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 466
Score = 31.9 bits (69), Expect = 5.6
Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 3/113 (2%)
Frame = +1
Query: 73 TVATVRETPRVDTDV-SVAAAEAHRTVIAAEALSLIVKAVTAIGADKVVITKTDRTGKDF 249
T AT +P+V TDV S AA A T I ++ S+ + + A + T + +
Sbjct: 26 TSATPTTSPQVSTDVESSAAVTASDTSIVPQSSSVTTTSESTTSATSTTESSTTLSSTES 85
Query: 250 KTDNMTATKIGMRTVPVATDIMATVTCQKVHIT--PRTVVSGMEKATASREDT 402
TD +T++ + + + +T + Q V + P + S +E +T++ T
Sbjct: 86 STDPITSSTSTSASQQPSVEPSSTSSSQSVEPSSIPISSSSSIEPSTSTEPIT 138
>UniRef50_UPI0000E4975F Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 217
Score = 31.5 bits (68), Expect = 7.4
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = +3
Query: 240 EGFQNRQYDGYQNRHANRTGGDGYYGNG 323
EG QYDGYQ A GG GY G G
Sbjct: 181 EGVSTYQYDGYQQDQAG--GGQGYEGQG 206
>UniRef50_UPI0000DA260D Cluster: PREDICTED: hypothetical protein;
n=2; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 247
Score = 31.5 bits (68), Expect = 7.4
Identities = 23/112 (20%), Positives = 30/112 (26%)
Frame = +1
Query: 73 TVATVRETPRVDTDVSVAAAEAHRTVIAAEALSLIVKAVTAIGADKVVITKTDRTGKDFK 252
T T T + T + T I + T IT T T
Sbjct: 97 TTTTTTTTTTITTTTTTTTTTTTTTTITTTTTTTTTTITTTTTTTTTTITTTTTTTTTIT 156
Query: 253 TDNMTATKIGMRTVPVATDIMATVTCQKVHITPRTVVSGMEKATASREDTRD 408
T T T T T T+T T T + T + TR+
Sbjct: 157 TTTTTTTTTTTTTTTTTTTTTTTITTTTTTTTTTTTTTTTTTTTTTTTTTRE 208
>UniRef50_Q58997 Cluster: Homoserine dehydrogenase; n=6;
Euryarchaeota|Rep: Homoserine dehydrogenase -
Methanococcus jannaschii
Length = 336
Score = 31.5 bits (68), Expect = 7.4
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +1
Query: 199 GADKVVITKTDRTGKDFKTDNMTATKIGMRTVPVATDIMATVTCQKVHITPRTVVSGMEK 378
G ++TK ++ G DF+T A ++G+ DI T K+ I +++ GM K
Sbjct: 178 GTTNYILTKMEKEGLDFETALKEAKELGIAETDPTQDIEGLDTAAKIVILANSIM-GMNK 236
>UniRef50_UPI0001552A01 Cluster: PREDICTED: similar to High mobility
group nucleosomal binding domain 2; n=2; Mus
musculus|Rep: PREDICTED: similar to High mobility group
nucleosomal binding domain 2 - Mus musculus
Length = 366
Score = 31.1 bits (67), Expect = 9.7
Identities = 25/99 (25%), Positives = 42/99 (42%)
Frame = -2
Query: 326 VTVAIISVATGTVRMPILVAVILSVLKSFPVRSVLVITTLSAPIAVTALTIRESASAAMT 147
V+V A V V+V+ +V + V +V V+T +SA VTA+++ + SA
Sbjct: 173 VSVVTAVSAVSVVTAVSAVSVVTAVSVATAVSAVSVVTAVSAVSVVTAVSVVTAVSAVSV 232
Query: 146 VRCXXXXXXXXXXXTLGVSLTVATVL*LWTRSIFSAIVF 30
+ + V V+ V + S SA+ F
Sbjct: 233 ITAVSAVSVVTAVSAVSVVTAVSAVSVVTAVSAVSAVQF 271
>UniRef50_Q1YHL7 Cluster: Putative methyl-accepting chemotaxis
protein; n=3; Aurantimonas sp. SI85-9A1|Rep: Putative
methyl-accepting chemotaxis protein - Aurantimonas sp.
SI85-9A1
Length = 735
Score = 31.1 bits (67), Expect = 9.7
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = -2
Query: 362 TTVLGVMCTF*HVTVAIISVATGTVRMPILVAVILSVLKSFPVRSVLVI-TTLSAPIAVT 186
T + GV T V S A + + I++A + ++L +VLV+ +++ PI+VT
Sbjct: 259 TILSGVAAT--RVDAEAASAAASSFALKIVLA-LAALLTLIIAATVLVVGRSIATPISVT 315
Query: 185 ALTIRESASAAMTVR 141
A +R+ A+ MT R
Sbjct: 316 AAAMRDFAAGDMTAR 330
>UniRef50_A6CGK9 Cluster: Putative uncharacterized protein; n=1;
Planctomyces maris DSM 8797|Rep: Putative
uncharacterized protein - Planctomyces maris DSM 8797
Length = 262
Score = 31.1 bits (67), Expect = 9.7
Identities = 21/90 (23%), Positives = 35/90 (38%)
Frame = +1
Query: 91 ETPRVDTDVSVAAAEAHRTVIAAEALSLIVKAVTAIGADKVVITKTDRTGKDFKTDNMTA 270
E+ R D E R V EALS K +I K + + ++++
Sbjct: 43 ESTRPGADPVPLEEELRRVVPVIEALSAQTKTPISIDTTKAEVARQALQAGAVIINDISG 102
Query: 271 TKIGMRTVPVATDIMATVTCQKVHITPRTV 360
+P+A + A V C + TP+T+
Sbjct: 103 LTFDSAMIPLAAESKAGVICMHIQGTPQTM 132
>UniRef50_A1SUB8 Cluster: Putative uncharacterized protein; n=1;
Psychromonas ingrahamii 37|Rep: Putative uncharacterized
protein - Psychromonas ingrahamii (strain 37)
Length = 419
Score = 31.1 bits (67), Expect = 9.7
Identities = 31/116 (26%), Positives = 45/116 (38%)
Frame = +1
Query: 1 AAAVRP*PIKKTIAEKMDRVQS*RTVATVRETPRVDTDVSVAAAEAHRTVIAAEALSLIV 180
AA R K T+A K ++ TVA +TP +T +VAA + +T +AA+A +
Sbjct: 300 AAKARTTETKMTVAAKARTTETKMTVAAKDKTP--ETKTTVAAKD--KTPVAAKAKTTRA 355
Query: 181 KAVTAIGADKVVITKTDRTGKDFKTDNMTATKIGMRTVPVATDIMATVTCQKVHIT 348
A + + T KT T+ AT T KV T
Sbjct: 356 ARAKVAAASRAKVAAAKNTEAKAKTAATKTTEAKTEAKVAATKTTEAKTEAKVAAT 411
>UniRef50_Q00VF6 Cluster: Chromosome 15 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 15 contig 1, DNA
sequence - Ostreococcus tauri
Length = 389
Score = 31.1 bits (67), Expect = 9.7
Identities = 21/50 (42%), Positives = 27/50 (54%)
Frame = +1
Query: 151 IAAEALSLIVKAVTAIGADKVVITKTDRTGKDFKTDNMTATKIGMRTVPV 300
I A A++ + K VT G DK V K TG D KT+ T K+ + VPV
Sbjct: 327 IGASAVNAVGKTVT--GGDKKVEEKEKVTGGDAKTEGKTEEKVKVE-VPV 373
>UniRef50_Q4QBD2 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 140
Score = 31.1 bits (67), Expect = 9.7
Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = +1
Query: 298 VATDIMATVTCQKVHITPRTV--VSGMEKATASREDT 402
VAT++MA + ++H+ RT+ GME+A S+ED+
Sbjct: 104 VATEVMANLQVVRLHLIERTLNATVGMEEACPSQEDS 140
>UniRef50_A7SDQ1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 208
Score = 31.1 bits (67), Expect = 9.7
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = -2
Query: 326 VTVAIISVATGT-VRMPILVAVILSVLKSFPVRSVLVITTLSAPIAVTALTIRESASAAM 150
V A+ SV T V ++V + SV+ V SV+V+T +++ + VTA+ +AA
Sbjct: 11 VVTAVASVVVVTAVASVVVVTAVASVVVVTAVASVVVVTAVASVVVVTAVASVVVVTAAA 70
Query: 149 TV 144
+V
Sbjct: 71 SV 72
>UniRef50_Q46C01 Cluster: Putative uncharacterized protein; n=1;
Methanosarcina barkeri str. Fusaro|Rep: Putative
uncharacterized protein - Methanosarcina barkeri (strain
Fusaro / DSM 804)
Length = 394
Score = 31.1 bits (67), Expect = 9.7
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 175 IVKAVTAIGADKVVITKT--DRTGKDFKTDNMTATKIGMRTVPVATDIMATVTC 330
IVK T G +T + TG K DNM+A ++ TV +A D+ T+TC
Sbjct: 177 IVKVGTMTGTVTYNMTPNMENMTGMATKMDNMSAGRMENLTVLMAGDMTGTITC 230
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 346,782,890
Number of Sequences: 1657284
Number of extensions: 5810799
Number of successful extensions: 22194
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 21236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22149
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19810951153
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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