Silkworm BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0038
         (427 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    48   1e-04
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    35   0.61 
UniRef50_O82022 Cluster: ENBP1 protein; n=3; Papilionoideae|Rep:...    33   1.9  
UniRef50_Q1QWT8 Cluster: Acyltransferase family protein; n=1; Ch...    32   5.7  
UniRef50_Q4D940 Cluster: Signal recognition particle protein, pu...    31   7.5  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 47.6 bits (108), Expect = 1e-04
 Identities = 21/22 (95%), Positives = 21/22 (95%)
 Frame = -2

Query: 414 FLLLRCVDELTAHLVLSGYWSP 349
           FLLLR VDELTAHLVLSGYWSP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 35.1 bits (77), Expect = 0.61
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -2

Query: 216 WYLPVRTHKRSYHQ 175
           WYLP RTHKRSYH+
Sbjct: 572 WYLPARTHKRSYHR 585


>UniRef50_O82022 Cluster: ENBP1 protein; n=3; Papilionoideae|Rep:
           ENBP1 protein - Medicago truncatula (Barrel medic)
          Length = 1701

 Score = 33.5 bits (73), Expect = 1.9
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +3

Query: 135 SKNQTRKIIISVITGGRTSCESARVGTTAPPISAVK 242
           SKN+ +K  + ++T G T C SA VGTT   +   K
Sbjct: 317 SKNKIKKKEVDLVTNGETVCGSANVGTTVEILETEK 352


>UniRef50_Q1QWT8 Cluster: Acyltransferase family protein; n=1;
           Chromohalobacter salexigens DSM 3043|Rep:
           Acyltransferase family protein - Chromohalobacter
           salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
          Length = 326

 Score = 31.9 bits (69), Expect = 5.7
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -2

Query: 168 RKL*FCGFDFYCTMLFLHXWKVNREHLLSTYFIRK 64
           R   F GF F+CT   L  W+ NR    S ++ R+
Sbjct: 176 RNFLFFGFPFFCTGYLLRQWETNRRDSESRHYYRR 210


>UniRef50_Q4D940 Cluster: Signal recognition particle protein,
           putative; n=2; Trypanosoma|Rep: Signal recognition
           particle protein, putative - Trypanosoma cruzi
          Length = 763

 Score = 31.5 bits (68), Expect = 7.5
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -3

Query: 425 FFFFFYCL-DVWTSSQPTWC*VVTGAHRHLQRKCATHL 315
           FFFFF C+ D    S   W  V +   RHL+R+  T +
Sbjct: 10  FFFFFLCVCDCVPLSDSLWLAVCSNVVRHLERRVCTRM 47


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 448,413,838
Number of Sequences: 1657284
Number of extensions: 8512943
Number of successful extensions: 16570
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16565
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20232460752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)