SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0153
         (663 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L...    79   9e-14
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet...    79   9e-14
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ...    77   4e-13
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ...    67   3e-10
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp...    53   7e-06
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:...    51   2e-05
UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8; Bacteria...    48   2e-04
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo...    43   0.006
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ...    43   0.008
UniRef50_Q8MTQ4 Cluster: Putative uncharacterized protein; n=1; ...    41   0.023
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba...    40   0.053
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    37   0.38 
UniRef50_A7SRW7 Cluster: Predicted protein; n=2; Nematostella ve...    37   0.38 
UniRef50_A7P7H1 Cluster: Chromosome chr9 scaffold_7, whole genom...    37   0.50 
UniRef50_Q3EQN8 Cluster: Putative uncharacterized protein; n=1; ...    35   2.0  
UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma j...    35   2.0  
UniRef50_A7Q7Z6 Cluster: Chromosome chr18 scaffold_61, whole gen...    34   3.5  
UniRef50_UPI00015543CC Cluster: hypothetical protein ORF012; n=1...    33   4.6  
UniRef50_P18747 Cluster: Oocyte zinc finger protein XlCOF28; n=2...    33   4.6  
UniRef50_Q484F8 Cluster: Periplasmic protein TorT; n=2; Alteromo...    33   6.1  
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ...    33   6.1  
UniRef50_Q9K9C6 Cluster: Beta-galactosidase; n=6; Firmicutes|Rep...    33   6.1  
UniRef50_UPI0000F1EDC6 Cluster: PREDICTED: hypothetical protein;...    33   8.1  
UniRef50_Q9QWE7 Cluster: Cysteine protease homolog; n=1; Rattus ...    33   8.1  
UniRef50_Q9LAA1 Cluster: Amidase-hexosaminidase; n=1; Staphyloco...    33   8.1  
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba...    33   8.1  

>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
           protein - Phage M13mp18
          Length = 102

 Score = 79.0 bits (186), Expect = 9e-14
 Identities = 34/37 (91%), Positives = 36/37 (97%)
 Frame = +1

Query: 508 QLNRLAAHPPFASWRNSEKARTDRPFQQLRSLNGEWQ 618
           QLNRLAAHPPFASWRNSE+ARTDRP QQLRSLNGEW+
Sbjct: 42  QLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWR 78



 Score = 40.3 bits (90), Expect = 0.040
 Identities = 19/25 (76%), Positives = 19/25 (76%)
 Frame = +2

Query: 461 LAVVLQRRDWENPGVTNLIALQHIP 535
           LAVVLQRRDWENPGVT L  L   P
Sbjct: 26  LAVVLQRRDWENPGVTQLNRLAAHP 50


>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
           Beta-galactosidase - Escherichia coli (strain K12)
          Length = 1024

 Score = 79.0 bits (186), Expect = 9e-14
 Identities = 34/37 (91%), Positives = 36/37 (97%)
 Frame = +1

Query: 508 QLNRLAAHPPFASWRNSEKARTDRPFQQLRSLNGEWQ 618
           QLNRLAAHPPFASWRNSE+ARTDRP QQLRSLNGEW+
Sbjct: 24  QLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWR 60



 Score = 40.3 bits (90), Expect = 0.040
 Identities = 19/25 (76%), Positives = 19/25 (76%)
 Frame = +2

Query: 461 LAVVLQRRDWENPGVTNLIALQHIP 535
           LAVVLQRRDWENPGVT L  L   P
Sbjct: 8   LAVVLQRRDWENPGVTQLNRLAAHP 32


>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
           Erwinia amylovora|Rep: Putative uncharacterized protein
           - Erwinia amylovora (Fire blight bacteria)
          Length = 123

 Score = 77.0 bits (181), Expect = 4e-13
 Identities = 33/37 (89%), Positives = 35/37 (94%)
 Frame = +1

Query: 508 QLNRLAAHPPFASWRNSEKARTDRPFQQLRSLNGEWQ 618
           QLNRLAAHPPFASWRNSE+ARTDRP QQLR LNGEW+
Sbjct: 84  QLNRLAAHPPFASWRNSEEARTDRPSQQLRXLNGEWR 120



 Score = 40.3 bits (90), Expect = 0.040
 Identities = 19/25 (76%), Positives = 19/25 (76%)
 Frame = +2

Query: 461 LAVVLQRRDWENPGVTNLIALQHIP 535
           LAVVLQRRDWENPGVT L  L   P
Sbjct: 68  LAVVLQRRDWENPGVTQLNRLAAHP 92


>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
           organisms|Rep: LacZ-alpha peptide - Escherichia coli
          Length = 90

 Score = 67.3 bits (157), Expect = 3e-10
 Identities = 30/32 (93%), Positives = 31/32 (96%)
 Frame = +1

Query: 508 QLNRLAAHPPFASWRNSEKARTDRPFQQLRSL 603
           QLNRLAAHPPFASWRNSE+ARTDRP QQLRSL
Sbjct: 38  QLNRLAAHPPFASWRNSEEARTDRPSQQLRSL 69



 Score = 40.3 bits (90), Expect = 0.040
 Identities = 19/25 (76%), Positives = 19/25 (76%)
 Frame = +2

Query: 461 LAVVLQRRDWENPGVTNLIALQHIP 535
           LAVVLQRRDWENPGVT L  L   P
Sbjct: 22  LAVVLQRRDWENPGVTQLNRLAAHP 46


>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
           spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
           spumigena CCY 9414
          Length = 72

 Score = 52.8 bits (121), Expect = 7e-06
 Identities = 21/26 (80%), Positives = 25/26 (96%)
 Frame = +1

Query: 547 WRNSEKARTDRPFQQLRSLNGEWQIV 624
           WRNSE+ARTDRP QQLRSLNGEW+++
Sbjct: 47  WRNSEEARTDRPSQQLRSLNGEWRLM 72


>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
           Beta-galactosidase - Yersinia pseudotuberculosis
          Length = 1066

 Score = 51.2 bits (117), Expect = 2e-05
 Identities = 24/46 (52%), Positives = 30/46 (65%)
 Frame = +1

Query: 508 QLNRLAAHPPFASWRNSEKARTDRPFQQLRSLNGEWQIVSVKYFVK 645
           Q +RL AHPPF SWR+ E A+ DRP  Q ++LNG W   S  YF +
Sbjct: 31  QYHRLEAHPPFHSWRDVESAQKDRPSPQQQTLNGLW---SFSYFTQ 73


>UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8;
           Bacteria|Rep: 50S ribosomal protein L5 - Moritella sp.
           PE36
          Length = 45

 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 24/28 (85%), Positives = 24/28 (85%)
 Frame = -1

Query: 615 PFAIQAAQLLERAIGAGLFAITPAGERG 532
           PFAIQAAQLL RAIGAGLFAITP  E G
Sbjct: 11  PFAIQAAQLLGRAIGAGLFAITPEFELG 38


>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
           Eukaryota|Rep: beta-galactosidase - Entamoeba
           histolytica HM-1:IMSS
          Length = 86

 Score = 43.2 bits (97), Expect = 0.006
 Identities = 17/17 (100%), Positives = 17/17 (100%)
 Frame = +3

Query: 459 HWPSFYNVVTGKTLALP 509
           HWPSFYNVVTGKTLALP
Sbjct: 5   HWPSFYNVVTGKTLALP 21



 Score = 36.7 bits (81), Expect = 0.50
 Identities = 16/18 (88%), Positives = 18/18 (100%)
 Frame = +2

Query: 509 NLIALQHIPLSPAGVIAK 562
           NLIALQHIPLSPAGVI++
Sbjct: 22  NLIALQHIPLSPAGVISE 39


>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
           Enterobacter sakazakii ATCC BAA-894|Rep: Putative
           uncharacterized protein - Enterobacter sakazakii ATCC
           BAA-894
          Length = 1043

 Score = 42.7 bits (96), Expect = 0.008
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = +1

Query: 511 LNRLAAHPPFASWRNSEKARTDRPFQQLRSLNGEWQ 618
           +NRL +H P   WR++++AR   P   + SL+GEWQ
Sbjct: 35  VNRLPSHTPLHGWRDADRARRGEPSDAVLSLDGEWQ 70


>UniRef50_Q8MTQ4 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 71

 Score = 41.1 bits (92), Expect = 0.023
 Identities = 17/21 (80%), Positives = 19/21 (90%)
 Frame = +3

Query: 54  NKHKLVVPMSRLHKIRNSFGC 116
           NK+KLVVPMSRLHK+R S GC
Sbjct: 47  NKYKLVVPMSRLHKLRYSIGC 67


>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
           Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
           pneumoniae
          Length = 1034

 Score = 39.9 bits (89), Expect = 0.053
 Identities = 18/33 (54%), Positives = 22/33 (66%)
 Frame = +1

Query: 511 LNRLAAHPPFASWRNSEKARTDRPFQQLRSLNG 609
           LNRL AHP FASWR+   AR + P  + R L+G
Sbjct: 31  LNRLPAHPVFASWRDELAARDNLPSSRRRQLDG 63


>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 37.1 bits (82), Expect = 0.38
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +3

Query: 408 RGGARYPIRPIVSRIT 455
           RGGARYPIRPIVSRIT
Sbjct: 260 RGGARYPIRPIVSRIT 275


>UniRef50_A7SRW7 Cluster: Predicted protein; n=2; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 439

 Score = 37.1 bits (82), Expect = 0.38
 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
 Frame = +3

Query: 27  SDIHNRNTR--NKHKLVVPMSRLHKIRNSFGCLSVRLYNKIPQDVQNLHIHRFKKTIKEH 200
           + +H+ NTR  +K  L  P S+ +     F  +S R + KIP  +++L  + F + +K H
Sbjct: 374 TQVHSHNTRYASKGNLFRPASKTNYGLTKFTAMSSRFWEKIPNCIKSLPYNSFIEQLKLH 433

Query: 201 LCN 209
           L N
Sbjct: 434 LLN 436


>UniRef50_A7P7H1 Cluster: Chromosome chr9 scaffold_7, whole genome
           shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
           chr9 scaffold_7, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 383

 Score = 36.7 bits (81), Expect = 0.50
 Identities = 26/86 (30%), Positives = 46/86 (53%)
 Frame = -3

Query: 286 IEIPGASNSFPFVQSSR*SLTL**ALLHRCSLIVFLNLCICRF*TSCGILLYRRTDKHPN 107
           IEI       P + +++ S T   + +HR  +I  L +C+C+   S  IL + +  ++P 
Sbjct: 35  IEITQNPEIIPSIPTTQASSTT--SKIHRVWIIFQLLVCVCQIMVSIVILWWSKIHENPE 92

Query: 106 EFRILCNLLIGTTSLCLFLVFLLCMS 29
             R++   L+G TS CL L+ L+ +S
Sbjct: 93  NRRVV--WLVGYTSGCLALLPLIYLS 116


>UniRef50_Q3EQN8 Cluster: Putative uncharacterized protein; n=1;
           Bacillus thuringiensis serovar israelensis ATCC
           35646|Rep: Putative uncharacterized protein - Bacillus
           thuringiensis serovar israelensis ATCC 35646
          Length = 543

 Score = 34.7 bits (76), Expect = 2.0
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
 Frame = +3

Query: 66  LVVPMSRLHKIRNSFGCLSVRLYNKIPQDVQNLHIHRFKKTIKE----HLCNK-AYYKVN 230
           LV   ++   + N   C +V  YN++ +D  ++H+    K  KE    ++ NK  YY VN
Sbjct: 342 LVTEATKYVNVYNKAMCKAVDEYNELLEDEDDMHLKVTPKVTKEDNKMYIANKLKYYSVN 401

Query: 231 DYLEDCTKGNELL 269
             LE   +G  +L
Sbjct: 402 PNLERVVEGTLIL 414


>UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC09076 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 109

 Score = 34.7 bits (76), Expect = 2.0
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = +2

Query: 464 AVVLQRRDWENPGVTNLIALQHIPLSPAGVIAKRPAPIALSNS 592
           A  L+RR+ +NPG   L  L+ +PL P G   K+  P  LS +
Sbjct: 57  AAFLKRREGKNPGCPQLNPLEALPLFPGGEKTKKAPPNRLSKN 99


>UniRef50_A7Q7Z6 Cluster: Chromosome chr18 scaffold_61, whole genome
           shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
           chr18 scaffold_61, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 833

 Score = 33.9 bits (74), Expect = 3.5
 Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
 Frame = +3

Query: 6   IEEFPKMSDIHNRNTRNKHKLVVPMSRLHKIRNSF--GCLSVRLYNKIPQDVQNL-HIHR 176
           IE  PK++ +  R  +N  +L   +  L  +   F  GCL +R + +I +DV+NL  +H 
Sbjct: 462 IECPPKLNSLCLRECKNLERLPSSICELKSLTTLFCSGCLRLRSFPEIIEDVENLRELHL 521

Query: 177 FKKTIKEHLCNKAYYKVNDYLE--DCT 251
               I+E   +  Y +   YL   +CT
Sbjct: 522 DGTAIEELPTSIQYLRGLQYLNLAECT 548


>UniRef50_UPI00015543CC Cluster: hypothetical protein ORF012; n=1;
           Pseudomonas phage M6|Rep: hypothetical protein ORF012 -
           Pseudomonas phage M6
          Length = 515

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
 Frame = +3

Query: 9   EEFPKMSDIHNRNTRNKHKLVVPMSRLHKIRNSF----GCLSVRLYNKIPQDVQNLHIHR 176
           + +P++SD+ N+ T    K + P ++ +K+ + +    G   +  + K P+D  N H H 
Sbjct: 104 QTYPQLSDVINK-TNKWFKRIFPGAKYNKVEHKWTFPDGEELLLRHMKSPEDYWNYHGHA 162

Query: 177 FKKTIKEHLCNKAYYKVNDYLEDCTKGNE 263
           +     E LCN A  K    +  C +  +
Sbjct: 163 YPWIGWEELCNWADDKCYTVMMSCCRSTK 191


>UniRef50_P18747 Cluster: Oocyte zinc finger protein XlCOF28; n=2;
           Xenopus|Rep: Oocyte zinc finger protein XlCOF28 -
           Xenopus laevis (African clawed frog)
          Length = 439

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
 Frame = +3

Query: 3   HIEEFPKMSDIHNRNTRNKHKLVVPMSRLHKIRNSFGCLSVRL-YNKIPQDVQNLHIHRF 179
           HIEE P M     +   N+H  ++   R H     F C   +  + K     ++L IH  
Sbjct: 56  HIEERPYMCTFCEKGY-NQHSKLIEHIRTHTGEKPFTCTECKKSFTKRCNLTEHLRIHTG 114

Query: 180 KKTIKEHLCNKAYYKVNDYLE 242
            K  K +LC+K ++  ++ +E
Sbjct: 115 AKPHKCNLCDKTFHYPSNLVE 135


>UniRef50_Q484F8 Cluster: Periplasmic protein TorT; n=2;
           Alteromonadales|Rep: Periplasmic protein TorT -
           Colwellia psychrerythraea (strain 34H / ATCC BAA-681)
           (Vibriopsychroerythus)
          Length = 356

 Score = 33.1 bits (72), Expect = 6.1
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = -2

Query: 563 FSLLRQLAKGGCAARR-LSW*RQGFPSHD-VVKRRPVNCNTTHYRANWVPGPPSSG 402
           F+L+ ++A    + R  +SW + G+   + +VK    N NTT     W PGP   G
Sbjct: 138 FALVNEIATNNISGRTGVSWYQMGYQLGEYLVKHHQNNFNTTPATLAWFPGPKRGG 193


>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
           uncultured bacterium|Rep: Non-ribosomal peptide
           synthetase - uncultured bacterium
          Length = 338

 Score = 33.1 bits (72), Expect = 6.1
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = -1

Query: 450 YDSL*GELGTGPPLE 406
           YDSL GELGTGPPLE
Sbjct: 278 YDSLYGELGTGPPLE 292


>UniRef50_Q9K9C6 Cluster: Beta-galactosidase; n=6; Firmicutes|Rep:
           Beta-galactosidase - Bacillus halodurans
          Length = 1014

 Score = 33.1 bits (72), Expect = 6.1
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +1

Query: 505 YQLNRLAAHPPFASWRNSEKARTDRPFQQLRSLNGEWQ 618
           + +NRL AH     +   E+A+ + P     SLNG W+
Sbjct: 16  FAVNRLPAHSDHVYYETVEEAKKEPPMSMRHSLNGHWK 53


>UniRef50_UPI0000F1EDC6 Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 195

 Score = 32.7 bits (71), Expect = 8.1
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +2

Query: 461 LAVVLQRRDWENPGVTN 511
           LAVVLQRRDWENP  T+
Sbjct: 179 LAVVLQRRDWENPMKTH 195


>UniRef50_Q9QWE7 Cluster: Cysteine protease homolog; n=1; Rattus
           sp.|Rep: Cysteine protease homolog - Rattus sp
          Length = 57

 Score = 32.7 bits (71), Expect = 8.1
 Identities = 15/20 (75%), Positives = 16/20 (80%)
 Frame = +3

Query: 480 VVTGKTLALPT*SPCSTSPF 539
           VVTGKTLA    +PCSTSPF
Sbjct: 14  VVTGKTLAPKEVAPCSTSPF 33


>UniRef50_Q9LAA1 Cluster: Amidase-hexosaminidase; n=1;
           Staphylococcus simulans|Rep: Amidase-hexosaminidase -
           Staphylococcus simulans
          Length = 1266

 Score = 32.7 bits (71), Expect = 8.1
 Identities = 16/64 (25%), Positives = 33/64 (51%)
 Frame = +3

Query: 45  NTRNKHKLVVPMSRLHKIRNSFGCLSVRLYNKIPQDVQNLHIHRFKKTIKEHLCNKAYYK 224
           +T      ++P+  L ++ N+   L   +Y+K      NL+   ++ T K  L +K++Y 
Sbjct: 486 STNTSQLKLIPVDSLGRLNNTNNGLYKTVYDKAGVQNSNLNNQTYRLTKKALLGDKSFYL 545

Query: 225 VNDY 236
           ++DY
Sbjct: 546 ISDY 549


>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
           Gammaproteobacteria|Rep: Beta-galactosidase -
           Pseudoalteromonas haloplanktis (Alteromonas
           haloplanktis)
          Length = 1039

 Score = 32.7 bits (71), Expect = 8.1
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +1

Query: 496 PWRYQLNRLAAHPPFASWRNSEKARTDRPFQQLRSLNGEW 615
           P   Q+N++ AH P   ++  E AR +   Q+ +SLNG+W
Sbjct: 16  PITVQVNQVKAHSPLNGFKTIEDARENTQSQK-KSLNGQW 54


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 612,087,608
Number of Sequences: 1657284
Number of extensions: 11856832
Number of successful extensions: 29848
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 28907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29845
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -