Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0088
(694 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P18935 Cluster: Cytochrome b; n=3382; root|Rep: Cytochr... 266 4e-70
UniRef50_O78784 Cluster: Cytochrome b; n=653; Coelomata|Rep: Cyt... 232 7e-60
UniRef50_Q8WCJ7 Cluster: Cytochrome b; n=2933; root|Rep: Cytochr... 230 3e-59
UniRef50_P00156 Cluster: Cytochrome b; n=22548; root|Rep: Cytoch... 220 2e-56
UniRef50_Q76F81 Cluster: Cytochrome b protein; n=12; Coelomata|R... 215 9e-55
UniRef50_Q2I6Z5 Cluster: Cytochrome b; n=41; Fungi/Metazoa group... 194 1e-48
UniRef50_O48101 Cluster: Cytochrome b; n=110; Serpentes|Rep: Cyt... 194 2e-48
UniRef50_A0EXD5 Cluster: Cytochrome b; n=21; Otophysi|Rep: Cytoc... 192 5e-48
UniRef50_Q8WF54 Cluster: Cytochrome b; n=23; Eukaryota|Rep: Cyto... 192 5e-48
UniRef50_Q950S3 Cluster: Cytochrome b; n=144; Eukaryota|Rep: Cyt... 188 1e-46
UniRef50_O47901 Cluster: Cytochrome b; n=17; Euteleostomi|Rep: C... 187 2e-46
UniRef50_P42792 Cluster: Cytochrome b; n=6041; root|Rep: Cytochr... 187 3e-46
UniRef50_Q00228 Cluster: Cytochrome b; n=19; Mytilus|Rep: Cytoch... 179 7e-44
UniRef50_A6YHJ9 Cluster: Apocytochrome b; n=2; Hexasterophora|Re... 178 1e-43
UniRef50_Q9B305 Cluster: Cytochrome b; n=19; Eukaryota|Rep: Cyto... 174 1e-42
UniRef50_P03879 Cluster: Intron-encoded RNA maturase bI4 precurs... 173 3e-42
UniRef50_P23134 Cluster: Cytochrome b; n=8595; root|Rep: Cytochr... 171 1e-41
UniRef50_Q9TAE6 Cluster: Cytochrome b; n=1; Anniella geronimensi... 165 1e-39
UniRef50_Q02761 Cluster: Cytochrome b; n=15; Rhodobacterales|Rep... 163 4e-39
UniRef50_Q5W910 Cluster: Cytochrome b; n=1; Lingula anatina|Rep:... 157 2e-37
UniRef50_P05418 Cluster: Cytochrome b; n=11; Alphaproteobacteria... 156 6e-37
UniRef50_Q4FE09 Cluster: Cytochrome b apoenzyme; n=4; Pectinidae... 155 1e-36
UniRef50_P51131 Cluster: Cytochrome b/c1 [Contains: Cytochrome b... 153 5e-36
UniRef50_Q2HJL4 Cluster: Cytochrome b; n=1; Campanulotes bidenta... 149 5e-35
UniRef50_Q8LYW3 Cluster: Apocytochrome b; n=2; Polytomella|Rep: ... 144 1e-33
UniRef50_Q9B8A8 Cluster: Apocytochrome b; n=1; Trichinella spira... 144 2e-33
UniRef50_Q0Z877 Cluster: Cytochrome b; n=7; Mermithidae|Rep: Cyt... 144 2e-33
UniRef50_A4Z9W1 Cluster: Cytochrome b; n=9; Colubroidea|Rep: Cyt... 143 4e-33
UniRef50_Q4KRX9 Cluster: Cytochrome b; n=3; Crassostrea|Rep: Cyt... 137 2e-31
UniRef50_Q06SB2 Cluster: Cytochrome b; n=1; Hiatella arctica|Rep... 136 4e-31
UniRef50_P24890 Cluster: Cytochrome b; n=210; Chromadorea|Rep: C... 136 4e-31
UniRef50_Q8HN51 Cluster: Cytochrome b; n=4; Chromadorea|Rep: Cyt... 136 5e-31
UniRef50_Q9ZZW7 Cluster: Cytochrome b mRNA maturase bI3; n=1; Sa... 134 1e-30
UniRef50_P03880 Cluster: Intron-encoded DNA endonuclease I-AniI ... 131 1e-29
UniRef50_A1W459 Cluster: Cytochrome b/b6, N-terminal domain; n=6... 130 2e-29
UniRef50_Q5DNB7 Cluster: Cytochrome b; n=1; Leptorhynchoides the... 130 2e-29
UniRef50_A5D6K1 Cluster: Apocytochrome b; n=10; Arthropoda|Rep: ... 130 3e-29
UniRef50_O31215 Cluster: Cytochrome b; n=132; cellular organisms... 128 1e-28
UniRef50_Q8SHP6 Cluster: Apocytochrome B; n=1; Hypocrea jecorina... 128 2e-28
UniRef50_Q8M4X4 Cluster: Cytochrome b; n=76; Dinophyceae|Rep: Cy... 125 9e-28
UniRef50_Q959C6 Cluster: Cytochrome b; n=28; Coelomata|Rep: Cyto... 125 1e-27
UniRef50_Q02768 Cluster: Cytochrome b; n=889; Apicomplexa|Rep: C... 123 4e-27
UniRef50_A1BQ48 Cluster: Cytochrome b; n=105; Clupeocephala|Rep:... 123 5e-27
UniRef50_Q94NM9 Cluster: Cytochrome b; n=4; Cricetidae|Rep: Cyto... 122 1e-26
UniRef50_Q5NNX9 Cluster: Cytochrome b subunit; n=1; Zymomonas mo... 119 6e-26
UniRef50_Q5FTF2 Cluster: Ubiquinol-cytochrome c reductase cytoch... 116 5e-25
UniRef50_Q9PEW9 Cluster: Ubiquinol cytochrome C oxidoreductase, ... 115 1e-24
UniRef50_Q0H8X2 Cluster: Probable intron-encoded endonuclease bI... 111 1e-23
UniRef50_Q3YFJ1 Cluster: Cytochrome b; n=27; Coelomata|Rep: Cyto... 111 2e-23
UniRef50_Q8M370 Cluster: Cytochrome b; n=46; Neoptera|Rep: Cytoc... 110 4e-23
UniRef50_A1C1A8 Cluster: Apocytochrome b; n=88; Magnoliophyta|Re... 106 4e-22
UniRef50_Q6TY86 Cluster: Cytochrome b; n=1; Xiphinema americanum... 105 1e-21
UniRef50_Q36099 Cluster: Cytochrome b; n=12; Piroplasmida|Rep: C... 105 1e-21
UniRef50_Q9KIW3 Cluster: Putative cytochrome b precursor; n=7; A... 104 2e-21
UniRef50_P03873 Cluster: Cytochrome b mRNA maturase bI2; n=4; Sa... 103 5e-21
UniRef50_A6Q5D2 Cluster: Ubiquinol cytochrome c oxidoreductase, ... 102 7e-21
UniRef50_Q94R91 Cluster: Cytochrome b; n=1; Sycoscapter sp. 402|... 100 3e-20
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 100 3e-20
UniRef50_UPI00015C5733 Cluster: hypothetical protein CKO_01262; ... 99 1e-19
UniRef50_Q35127 Cluster: Cytochrome b; n=7; Fungi/Metazoa group|... 95 1e-18
UniRef50_Q85PH8 Cluster: Cytochrome b; n=1; Dendrobates reticula... 95 2e-18
UniRef50_P81376 Cluster: Cytochrome b; n=1; Plasmodium gallinace... 91 2e-17
UniRef50_Q1HTY3 Cluster: Cytochrome oxidase B; n=11; Stolidobran... 89 1e-16
UniRef50_Q9B8V1 Cluster: Cytochrome b; n=66; Platyhelminthes|Rep... 88 2e-16
UniRef50_Q74CM4 Cluster: Cytochrome b/b6; n=4; Geobacter|Rep: Cy... 83 5e-15
UniRef50_P56773 Cluster: Cytochrome b6; n=298; cellular organism... 83 6e-15
UniRef50_Q34992 Cluster: Cytochrome b; n=1; Meloidogyne hapla|Re... 76 7e-13
UniRef50_Q9ZGG0 Cluster: Cytochrome b6; n=3; Heliobacteriaceae|R... 76 1e-12
UniRef50_Q06824 Cluster: , mobile intron of apocytochrome b gene... 75 1e-12
UniRef50_Q4KTX4 Cluster: Cytochrome b; n=3; Lanius meridionalis ... 70 5e-11
UniRef50_Q6JCT1 Cluster: Cytochrome b; n=6; Neoptera|Rep: Cytoch... 69 8e-11
UniRef50_Q35015 Cluster: Cytochrome b; n=1; Meloidogyne javanica... 69 8e-11
UniRef50_O66459 Cluster: Cytochrome b; n=2; Aquifex aeolicus|Rep... 65 1e-09
UniRef50_A3QRH7 Cluster: Cytochrome b; n=1; Microcotyle sebastis... 65 1e-09
UniRef50_Q18UP1 Cluster: Cytochrome b/b6-like; n=2; Desulfitobac... 65 2e-09
UniRef50_Q0LKT7 Cluster: Cytochrome b/b6-like; n=1; Herpetosipho... 65 2e-09
UniRef50_A3ER63 Cluster: Cytochrome b subunit of the bc complex;... 64 3e-09
UniRef50_Q67JM0 Cluster: Menaquinol-cytochrome C reductase; n=1;... 64 4e-09
UniRef50_A3ZQU1 Cluster: Menaquinol-cytochrome-c reductase cytoc... 64 4e-09
UniRef50_Q952Z5 Cluster: Cytochrome b; n=1; Partula turgida|Rep:... 62 1e-08
UniRef50_Q1ARW1 Cluster: Cytochrome b/b6-like protein; n=2; Rubr... 61 2e-08
UniRef50_A7H6W4 Cluster: Cytochrome b/b6 domain; n=2; Anaeromyxo... 61 2e-08
UniRef50_Q1HTY1 Cluster: Cytochrome oxidase B; n=2; Pyuridae|Rep... 61 2e-08
UniRef50_Q9BGI6 Cluster: Cytochrome b; n=1; Elephas maximus|Rep:... 61 3e-08
UniRef50_P46912 Cluster: Menaquinol-cytochrome c reductase cytoc... 60 7e-08
UniRef50_Q01PC6 Cluster: Cytochrome b/b6, N-terminal domain; n=1... 57 4e-07
UniRef50_A6CCS1 Cluster: Cytochrome b6; n=1; Planctomyces maris ... 57 5e-07
UniRef50_Q9GM37 Cluster: Putative uncharacterized protein; n=1; ... 57 5e-07
UniRef50_Q1EN74 Cluster: Cytochrome b; n=2; Heligmosomoides poly... 56 6e-07
UniRef50_Q01T86 Cluster: Cytochrome b/b6, N-terminal domain; n=1... 56 8e-07
UniRef50_Q01YB7 Cluster: Cytochrome b/b6, N-terminal domain; n=6... 56 1e-06
UniRef50_Q9MYR6 Cluster: Cytochrome b; n=4; Cetartiodactyla|Rep:... 56 1e-06
UniRef50_Q9F721 Cluster: Cytochrome bc complex cytochrome b subu... 56 1e-06
UniRef50_A0LFE3 Cluster: Cytochrome b/b6, N-terminal domain; n=1... 55 2e-06
UniRef50_A4A2J7 Cluster: Apocytochrome b6; n=1; Blastopirellula ... 54 3e-06
UniRef50_Q8W9D9 Cluster: Cytochrome-b protein; n=9; Sabanejewia|... 53 8e-06
UniRef50_A6GGF8 Cluster: Cytochrome b/b6-like protein; n=1; Ples... 53 8e-06
UniRef50_Q9HRR2 Cluster: Cytochrome b6; n=4; Halobacteriaceae|Re... 52 1e-05
UniRef50_Q021B1 Cluster: Cytochrome b/b6, N-terminal domain; n=4... 51 3e-05
UniRef50_Q9DDQ5 Cluster: Cytochrome b; n=15; Decapterus russelli... 50 5e-05
UniRef50_Q8M833 Cluster: Cytochrome b; n=1; Microstomum lineare|... 49 1e-04
UniRef50_Q9GAU9 Cluster: Cytochrome b; n=2; Eulemur mongoz|Rep: ... 47 4e-04
UniRef50_Q33568 Cluster: Cytochrome b; n=33; Kinetoplastida|Rep:... 47 4e-04
UniRef50_Q4AEZ5 Cluster: Cytochrome b/b6, N-terminal; n=1; Chlor... 45 0.002
UniRef50_Q7M2D6 Cluster: Ubiquinol-cytochrome-c reductase (EC 1.... 44 0.003
UniRef50_Q5BLW9 Cluster: Cytochrome b; n=1; Pseudourostyla crist... 43 0.006
UniRef50_Q97UN3 Cluster: Quinol oxidase-2, cytochrome b; n=5; Su... 43 0.006
UniRef50_P39480 Cluster: Cytochrome b; n=5; Sulfolobaceae|Rep: C... 43 0.006
UniRef50_Q748R9 Cluster: Cytochrome b/b6; n=7; Desulfuromonadale... 43 0.008
UniRef50_Q3LHR7 Cluster: Cytochrome b; n=1; Trichosporon domesti... 43 0.008
UniRef50_Q97BT4 Cluster: Cytochrome b; n=2; Thermoplasma|Rep: Cy... 43 0.008
UniRef50_Q91096 Cluster: Cytochrome b; n=2; Malaconotidae|Rep: C... 42 0.014
UniRef50_Q7NJG2 Cluster: Cytochrome b6; n=1; Gloeobacter violace... 42 0.014
UniRef50_Q85RG3 Cluster: Cytochrome b; n=1; Aegotheles savesi|Re... 41 0.033
UniRef50_A7QK39 Cluster: Chromosome chr16 scaffold_110, whole ge... 40 0.076
UniRef50_Q8HE84 Cluster: Cytochrome b; n=1; Lyristes plebejus|Re... 39 0.13
UniRef50_Q7M2D4 Cluster: Ubiquinol-cytochrome-c reductase (EC 1.... 38 0.31
UniRef50_A3H909 Cluster: Cytochrome b/b6-like; n=1; Caldivirga m... 38 0.31
UniRef50_O47500 Cluster: RT-like protein; n=1; Venturia inaequal... 37 0.41
UniRef50_Q5DKX9 Cluster: Cytochrome b; n=8; Pseudococcidae|Rep: ... 36 0.94
UniRef50_Q703H8 Cluster: Cytochrome b; n=2; Halobacteriaceae|Rep... 36 0.94
UniRef50_Q9I8C6 Cluster: Cytochrome b; n=2; Phasianidae|Rep: Cyt... 36 1.2
UniRef50_Q70LX1 Cluster: Cytochrome b; n=1; Hoplobatrachus rugul... 34 2.9
UniRef50_UPI0000F2E488 Cluster: PREDICTED: similar to submaxilla... 34 3.8
UniRef50_Q9B903 Cluster: Cytochrome b; n=1; Petrodromus tetradac... 34 3.8
UniRef50_Q4YBP9 Cluster: Putative uncharacterized protein; n=3; ... 34 3.8
UniRef50_UPI000155471A Cluster: PREDICTED: similar to epsin 3; n... 33 5.0
UniRef50_Q5SH00 Cluster: Quinol-cytochrome c reductase, cytochro... 33 6.6
UniRef50_Q2W546 Cluster: Cytochrome b subunit of the bc complex;... 33 8.8
UniRef50_Q9AVX9 Cluster: Putative U5 snRNP-specific protein; n=1... 33 8.8
UniRef50_Q25811 Cluster: Rps17 protein; n=1; Plasmodium falcipar... 33 8.8
>UniRef50_P18935 Cluster: Cytochrome b; n=3382; root|Rep: Cytochrome
b - Drosophila melanogaster (Fruit fly)
Length = 378
Score = 266 bits (652), Expect = 4e-70
Identities = 134/231 (58%), Positives = 152/231 (65%)
Frame = +2
Query: 2 NISS**NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN 181
NISS N GSLL LCLIIQI+TGLFL ++YTA+I +AFY VN+ICR+VNYG ++RTLHAN
Sbjct: 27 NISSWWNFGSLLGLCLIIQILTGLFLAMHYTADINLAFYSVNHICRDVNYGWLLRTLHAN 86
Query: 182 GASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 361
GASFFFICIYLH+GRGIYY S+ L YVLP GQ+SFW ATV
Sbjct: 87 GASFFFICIYLHVGRGIYYGSYKFTPTWLIGVIILFLVMGTAFMGYVLPWGQMSFWVATV 146
Query: 362 ITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGS 541
ITNLL AIPYLG LV + GGFAVDNATLTRF+T QTGS
Sbjct: 147 ITNLLYAIPYLGMDLVQWLWGGFAVDNATLTRFFTFHFILPFIVLAMTMIHLLFLHQTGS 206
Query: 542 NNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNF 694
NNP+GLN N+DKIPFHP+FTFKD +P LLGDPDNF
Sbjct: 207 NNPIGLNSNIDKIPFHPYFTFKDIVGFIVMIFILISLVLISPNLLGDPDNF 257
>UniRef50_O78784 Cluster: Cytochrome b; n=653; Coelomata|Rep:
Cytochrome b - Capra sibirica (Siberian ibex)
Length = 380
Score = 232 bits (567), Expect = 7e-60
Identities = 117/231 (50%), Positives = 141/231 (61%)
Frame = +2
Query: 2 NISS**NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN 181
NISS N GSLL +CLI+QI+TGLFL ++YT++ AF V +ICR+VNYG IIR +HAN
Sbjct: 26 NISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHAN 85
Query: 182 GASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 361
GAS FFIC+++HIGRG+YY S+ YVLP GQ+SFWGATV
Sbjct: 86 GASMFFICLFMHIGRGLYYGSYTFLETWNIGVLLLFTTMATAFMGYVLPWGQMSFWGATV 145
Query: 362 ITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGS 541
ITNLLSAIPY+GT LV I GGF+VD ATLTRF+ +TGS
Sbjct: 146 ITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIIMALAMVHLLFLHETGS 205
Query: 542 NNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNF 694
NNP G+ N DKIPFHP++T KD P LLGDPDN+
Sbjct: 206 NNPTGIPSNTDKIPFHPYYTIKDILGATLLILALMLLVLFMPDLLGDPDNY 256
>UniRef50_Q8WCJ7 Cluster: Cytochrome b; n=2933; root|Rep: Cytochrome
b - Cryptotis parva (Least shrew)
Length = 379
Score = 230 bits (562), Expect = 3e-59
Identities = 117/231 (50%), Positives = 142/231 (61%)
Frame = +2
Query: 2 NISS**NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN 181
NISS N GSLL +CLIIQI+TGLFL ++YT++ AF V +ICR+VNYG +IR LHAN
Sbjct: 26 NISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHAN 85
Query: 182 GASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 361
GAS FFIC++LH+GRG+YY S+ YVLP GQ+SFWGATV
Sbjct: 86 GASMFFICLFLHVGRGLYYGSYMFMETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATV 145
Query: 362 ITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGS 541
ITNLLSAIPY+G+ LV I GGF+VD ATLTRF+ +TGS
Sbjct: 146 ITNLLSAIPYIGSDLVQWIWGGFSVDKATLTRFFAFHFILPFVIAALAGVHLLFLHETGS 205
Query: 542 NNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNF 694
NNP GL + DKIPFHP++T KD +P LLGDPDN+
Sbjct: 206 NNPSGLPSDADKIPFHPYYTIKDILGILLLILVLTCLVLFSPDLLGDPDNY 256
>UniRef50_P00156 Cluster: Cytochrome b; n=22548; root|Rep:
Cytochrome b - Homo sapiens (Human)
Length = 380
Score = 220 bits (538), Expect = 2e-56
Identities = 114/231 (49%), Positives = 139/231 (60%)
Frame = +2
Query: 2 NISS**NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN 181
NIS+ N GSLL CLI+QI TGLFL ++Y+ + AF + +I R+VNYG IIR LHAN
Sbjct: 26 NISAWWNFGSLLGACLILQITTGLFLAMHYSPDASTAFSSIAHITRDVNYGWIIRYLHAN 85
Query: 182 GASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 361
GAS FFIC++LHIGRG+YY SF YVLP GQ+SFWGATV
Sbjct: 86 GASMFFICLFLHIGRGLYYGSFLYSETWNIGIILLLATMATAFMGYVLPWGQMSFWGATV 145
Query: 362 ITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGS 541
ITNLLSAIPY+GT LV I GG++VD+ TLTRF+T +TGS
Sbjct: 146 ITNLLSAIPYIGTDLVQWIWGGYSVDSPTLTRFFTFHFILPFIIAALATLHLLFLHETGS 205
Query: 542 NNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNF 694
NNPLG+ + DKI FHP++T KD +P LLGDPDN+
Sbjct: 206 NNPLGITSHSDKITFHPYYTIKDALGLLLFLLSLMTLTLFSPDLLGDPDNY 256
>UniRef50_Q76F81 Cluster: Cytochrome b protein; n=12; Coelomata|Rep:
Cytochrome b protein - Ornithodoros porcinus
Length = 365
Score = 215 bits (525), Expect = 9e-55
Identities = 108/231 (46%), Positives = 141/231 (61%)
Frame = +2
Query: 2 NISS**NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN 181
NIS N+GSLL CL IQI TG+FL ++++++I +AF +++I R+VN G +IR HAN
Sbjct: 23 NISYMWNMGSLLFSCLAIQISTGIFLAMHFSSDISLAFSSISHIMRDVNMGWMIRMAHAN 82
Query: 182 GASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 361
ASFFFI +Y+HI RG+Y+ SF LK + YVLP GQ+SFWGATV
Sbjct: 83 TASFFFIFLYIHIARGLYFSSFILKGPWMSGVTIIFTLMATAFLGYVLPWGQMSFWGATV 142
Query: 362 ITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGS 541
ITNLLSAIPY+GT + I GGF+VDN TLTRF+T +TGS
Sbjct: 143 ITNLLSAIPYIGTSITQWIWGGFSVDNPTLTRFFTLHFMLPFILTVLIIIHIFSLHETGS 202
Query: 542 NNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNF 694
+NPLG++ N+DKIPFHP++T KD PY+ DP+NF
Sbjct: 203 SNPLGISNNIDKIPFHPYYTLKDIMGFLIMLLILFTIIMNYPYMFSDPENF 253
>UniRef50_Q2I6Z5 Cluster: Cytochrome b; n=41; Fungi/Metazoa
group|Rep: Cytochrome b - Lottia digitalis (California
fingered limpet)
Length = 389
Score = 194 bits (474), Expect = 1e-48
Identities = 99/225 (44%), Positives = 133/225 (59%)
Frame = +2
Query: 20 NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF 199
N GSLL LCLI+Q+I+GLFL+ +Y+A+ AF V +I RNVN+G ++R++HANGAS FF
Sbjct: 36 NFGSLLGLCLIMQLISGLFLSFHYSAHESTAFEAVVHIERNVNFGWLLRSIHANGASAFF 95
Query: 200 ICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLS 379
C+Y HIGRG+YY + + V L YVLP GQ+SFWGATVITNLL+
Sbjct: 96 FCMYAHIGRGLYYGCYCQRKVWLSGVVLFLITMGIAFLGYVLPWGQMSFWGATVITNLLT 155
Query: 380 AIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGL 559
AIP +G+ LV + GGF+V TLTRFY+ GS+NPLG+
Sbjct: 156 AIPMVGSPLVKWVWGGFSVSGVTLTRFYSLHFILPFVLSMLVLGHVILLHDKGSSNPLGI 215
Query: 560 NRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNF 694
+ + KI FHP+++ KD P++LG P+NF
Sbjct: 216 SSDTGKIRFHPYYSTKDLLGGCVFLTLFMGLVLLYPHMLGAPENF 260
>UniRef50_O48101 Cluster: Cytochrome b; n=110; Serpentes|Rep:
Cytochrome b - Micrurus fulvius microgalbineus (Mexican
coral snake)
Length = 371
Score = 194 bits (472), Expect = 2e-48
Identities = 101/229 (44%), Positives = 131/229 (57%)
Frame = +2
Query: 2 NISS**NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN 181
NIS+ N GS+L CL++Q++TG FL I+YTANI +AF V +I R+V G I++ HA
Sbjct: 18 NISTWWNFGSMLLTCLMLQVLTGFFLAIHYTANINLAFSSVVHITRDVPCGWIMQNTHAI 77
Query: 182 GASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 361
GAS FFICIY+HI RG+YY + K V L YVLP GQ+SFW ATV
Sbjct: 78 GASLFFICIYIHIARGLYYGLYLNKNVWLSGVTLLMTLMATAFFGYVLPWGQMSFWAATV 137
Query: 362 ITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGS 541
ITNLL+AIPYLG + + GGF++++ TLTRF GS
Sbjct: 138 ITNLLTAIPYLGVAVTTWLWGGFSINDPTLTRFCALHFILPFIIISLSSIHIILLHNEGS 197
Query: 542 NNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPD 688
NNPLG N ++DKIPFHP+ ++KD +P LL DP+
Sbjct: 198 NNPLGTNSDIDKIPFHPYHSYKDFMTTTSMIILLPISLSVSPDLLXDPE 246
>UniRef50_A0EXD5 Cluster: Cytochrome b; n=21; Otophysi|Rep:
Cytochrome b - Clarias liocephalus
Length = 373
Score = 192 bits (469), Expect = 5e-48
Identities = 95/154 (61%), Positives = 112/154 (72%)
Frame = +2
Query: 2 NISS**NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN 181
NIS+ N GSL+ LCL +QI+TGLFL ++YT++I AF V +ICR+VNYG IIR LHAN
Sbjct: 22 NISTWWNFGSLMLLCLAVQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGWIIRNLHAN 81
Query: 182 GASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 361
GASFFFICIYLHIGRG+YY S+ K YVLP GQ+SFWGATV
Sbjct: 82 GASFFFICIYLHIGRGLYYGSYMYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATV 141
Query: 362 ITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 463
ITNLLSA+PY+G LV I GGF+VDNATLTRF+
Sbjct: 142 ITNLLSAVPYMGNALVQWIWGGFSVDNATLTRFF 175
Score = 192 bits (469), Expect = 5e-48
Identities = 95/154 (61%), Positives = 112/154 (72%)
Frame = +2
Query: 2 NISS**NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN 181
NIS+ N GSL+ LCL +QI+TGLFL ++YT++I AF V +ICR+VNYG IIR LHAN
Sbjct: 209 NISTWWNFGSLMLLCLAVQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGWIIRNLHAN 268
Query: 182 GASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 361
GASFFFICIYLHIGRG+YY S+ K YVLP GQ+SFWGATV
Sbjct: 269 GASFFFICIYLHIGRGLYYGSYMYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATV 328
Query: 362 ITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 463
ITNLLSA+PY+G LV I GGF+VDNATLTRF+
Sbjct: 329 ITNLLSAVPYMGNALVQWIWGGFSVDNATLTRFF 362
>UniRef50_Q8WF54 Cluster: Cytochrome b; n=23; Eukaryota|Rep:
Cytochrome b - Venerupis (Ruditapes) philippinarum
Length = 440
Score = 192 bits (469), Expect = 5e-48
Identities = 98/231 (42%), Positives = 131/231 (56%)
Frame = +2
Query: 2 NISS**NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN 181
N+SS N GSL+ +CL+ QIITGL + ++YT + +AF V +I R+VN G +R LHAN
Sbjct: 37 NLSSMWNFGSLMIMCLVSQIITGLLMAVHYTPEVNLAFSSVVHIMRDVNGGWFVRNLHAN 96
Query: 182 GASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 361
GAS FF+ IYLHIGRG+YY SF++K L YVLP GQ+SFWGATV
Sbjct: 97 GASAFFMLIYLHIGRGVYYHSFHMKKTWLVGCIIFTMLMVTAFTGYVLPWGQMSFWGATV 156
Query: 362 ITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGS 541
ITNL A+PY+G+ L+ + GG V +ATL RF+ +TGS
Sbjct: 157 ITNLFGAVPYVGSTLMEWVWGGHCVGDATLKRFFVLHFVSPFIIAALVALHLFFLHETGS 216
Query: 542 NNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNF 694
+NPLG++ + D +PFH ++ KD +P L DP NF
Sbjct: 217 SNPLGVDSSGDLVPFHNYYLLKDLVGMVLMGLALAVVCLNSPDLFLDPTNF 267
>UniRef50_Q950S3 Cluster: Cytochrome b; n=144; Eukaryota|Rep:
Cytochrome b - Spizellomyces punctatus
Length = 396
Score = 188 bits (457), Expect = 1e-46
Identities = 102/226 (45%), Positives = 129/226 (57%), Gaps = 2/226 (0%)
Frame = +2
Query: 20 NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF 199
N GSLL + L+I II+GL L ++YT N +AF V +I R+VN G ++R +HANGASFFF
Sbjct: 31 NFGSLLGVNLVILIISGLTLAMHYTPNTLLAFSSVEHIMRDVNNGWLLRYIHANGASFFF 90
Query: 200 ICIYLHIGRGIYYESFNLKYV*L--XXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 373
I +YLHIGR +YY S+ L YVLP GQ+SFWGATVITNL
Sbjct: 91 IWVYLHIGRNLYYGSYRSPRGLLWSIGVVIFILMMATAFIGYVLPWGQMSFWGATVITNL 150
Query: 374 LSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPL 553
LSAIP++GT V + GGF+VDNATL RF++ Q GSNNP
Sbjct: 151 LSAIPWIGTDFVLFVWGGFSVDNATLNRFFSLHYLLPFILAALVVMHLLALHQDGSNNPE 210
Query: 554 GLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDN 691
G++ + D++ FHP+FT KD PY LG PDN
Sbjct: 211 GISSSSDRLRFHPYFTSKDLVGFVWMAILLSIFVFFAPYYLGHPDN 256
>UniRef50_O47901 Cluster: Cytochrome b; n=17; Euteleostomi|Rep:
Cytochrome b - Leuciscus carolitertii
Length = 345
Score = 187 bits (456), Expect = 2e-46
Identities = 92/154 (59%), Positives = 111/154 (72%)
Frame = +2
Query: 2 NISS**NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN 181
NIS+ N GSLL LCLI QI+TGLFL ++YT++I AF V +ICR+VNYG +IR+LHAN
Sbjct: 26 NISALWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVTHICRDVNYGWLIRSLHAN 85
Query: 182 GASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 361
GASFFFIC+Y+HI RG+YY S+ K YVLP GQ+SFWGATV
Sbjct: 86 GASFFFICLYMHIARGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATV 145
Query: 362 ITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 463
ITNLLSA+PY+G LV I GGF+VD ATLTRF+
Sbjct: 146 ITNLLSAVPYMGDTLVQWIWGGFSVDXATLTRFF 179
>UniRef50_P42792 Cluster: Cytochrome b; n=6041; root|Rep: Cytochrome
b - Arabidopsis thaliana (Mouse-ear cress)
Length = 393
Score = 187 bits (455), Expect = 3e-46
Identities = 97/233 (41%), Positives = 134/233 (57%), Gaps = 2/233 (0%)
Frame = +2
Query: 2 NISS**NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN 181
N+S G L +CL+IQI+TG+FL ++YT ++++AF V +I R+V G ++R +HAN
Sbjct: 31 NLSYWWGFGPLAGICLVIQIVTGVFLAMHYTPHVDLAFNSVEHIMRDVEGGWLLRYMHAN 90
Query: 182 GASFFFICIYLHIGRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGA 355
GAS FFI +YLHI RG+YY S++ ++V YVLP GQ+SFWGA
Sbjct: 91 GASMFFIVVYLHIFRGLYYASYSSPREFVWCLGVVIFLLMIVTAFIGYVLPWGQMSFWGA 150
Query: 356 TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQT 535
TVIT+L SAIP +G +V + GGF+VDNATL RF++ Q
Sbjct: 151 TVITSLASAIPVVGDTIVTWLWGGFSVDNATLNRFFSLHYLLPFILVGASLLHLAALHQY 210
Query: 536 GSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNF 694
GSNNPLG++ +DKI F+P+F KD P +LG PDN+
Sbjct: 211 GSNNPLGVHSEMDKIAFYPYFYVKDLVGWVAFAIFFSIWIFYAPNVLGHPDNY 263
>UniRef50_Q00228 Cluster: Cytochrome b; n=19; Mytilus|Rep:
Cytochrome b - Mytilus edulis (Blue mussel)
Length = 397
Score = 179 bits (435), Expect = 7e-44
Identities = 93/231 (40%), Positives = 129/231 (55%)
Frame = +2
Query: 2 NISS**NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN 181
N+++ + GS+L LCL+IQ+++GL L+ +YTA+ ++AF V +I RNV G ++R +HAN
Sbjct: 41 NLNAWWSFGSMLGLCLVIQLLSGLLLSAHYTAHEDMAFDSVVHIMRNVEKGWMLRNIHAN 100
Query: 182 GASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 361
G+S FFICIY HI RG+YY S+ K V Y LP GQ+S+WGATV
Sbjct: 101 GSSMFFICIYAHIARGLYYGSYLDKTVWYFGVHLFLLTMAEAFLGYTLPWGQMSYWGATV 160
Query: 362 ITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGS 541
ITN+LS P +G ++ + GG+ V NATL RFYT + GS
Sbjct: 161 ITNMLSVSPVVGESMLRYVWGGWTVCNATLKRFYTLHFLLPFVMVAVVFLHLFFLHEKGS 220
Query: 542 NNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNF 694
NNPLG+ +PFHPF+T KD +P LLG+ N+
Sbjct: 221 NNPLGIESGTMCVPFHPFYTIKDLFGYVCFSFFFMYLVCVDPELLGNHLNY 271
>UniRef50_A6YHJ9 Cluster: Apocytochrome b; n=2; Hexasterophora|Rep:
Apocytochrome b - Iphiteon panicea
Length = 397
Score = 178 bits (433), Expect = 1e-43
Identities = 93/231 (40%), Positives = 121/231 (52%)
Frame = +2
Query: 2 NISS**NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN 181
NIS N GSLL LCLIIQ+ITG+ L ++Y I +F + + RNV++G I R LHAN
Sbjct: 33 NISYHWNFGSLLGLCLIIQLITGILLAMHYCPEINNSFNTIAHTIRNVSWGHITRNLHAN 92
Query: 182 GASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 361
GAS FF+C+YLHI R IY+ ++ K YVLP GQ+SFW ATV
Sbjct: 93 GASIFFLCVYLHISRNIYHNTWKNKTTWTLGITIYLLMIITAFMGYVLPWGQMSFWAATV 152
Query: 362 ITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGS 541
ITNL SAIPY+G +V I G F++ NATL RFY+ +
Sbjct: 153 ITNLFSAIPYIGNTIVLWIWGSFSISNATLNRFYSLHYLLPFILTTLIGMHILALQEENH 212
Query: 542 NNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNF 694
+NP G +D +PFH ++T KD P + DP+NF
Sbjct: 213 SNPTGTQSEVDSLPFHQYYTTKDSQTIILTTIIIAMIITHIPNIFTDPENF 263
>UniRef50_Q9B305 Cluster: Cytochrome b; n=19; Eukaryota|Rep:
Cytochrome b - Ranina ranina
Length = 179
Score = 174 bits (424), Expect = 1e-42
Identities = 87/173 (50%), Positives = 102/173 (58%)
Frame = +2
Query: 176 ANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGA 355
ANGASFFFIC+Y+HIGRGI+Y S+ + + YVLP GQ+SFWGA
Sbjct: 1 ANGASFFFICLYIHIGRGIFYGSYMTFHAWMIGVVILFMVMAAAFLGYVLPWGQMSFWGA 60
Query: 356 TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQT 535
TVITNL SAIP++GT LV I GGF+V NATLTRF+T Q
Sbjct: 61 TVITNLFSAIPFIGTDLVQWIWGGFSVGNATLTRFFTFHFILPFIVLAASLVHILFLHQA 120
Query: 536 GSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNF 694
G+NNPLG++ DKIPFHP+FTFKD NPYLLGDPDNF
Sbjct: 121 GANNPLGISSQSDKIPFHPYFTFKDIVGFVVMLSALIILTLLNPYLLGDPDNF 173
>UniRef50_P03879 Cluster: Intron-encoded RNA maturase bI4 precursor
(RNA maturase SCbI4) [Contains: Truncated, nonfunctional
cytochrome b; RNA maturase bI4 (EC 3.1.-.-)]; n=18;
Fungi/Metazoa group|Rep: Intron-encoded RNA maturase bI4
precursor (RNA maturase SCbI4) [Contains: Truncated,
nonfunctional cytochrome b; RNA maturase bI4 (EC
3.1.-.-)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 638
Score = 173 bits (422), Expect = 3e-42
Identities = 87/199 (43%), Positives = 122/199 (61%), Gaps = 2/199 (1%)
Frame = +2
Query: 20 NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF 199
N+GSLL LCL+IQI+TG+F+ ++Y++NIE+AF V +I R+V+ G I+R LHANGASFFF
Sbjct: 31 NMGSLLGLCLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFFF 90
Query: 200 ICIYLHIGRGIYYESFNLKYV*L--XXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 373
+ +++H+ +G+YY S+ V L Y GQ+S WGATVITNL
Sbjct: 91 MVMFMHMAKGLYYGSYRSPRVTLWNVGVIIFILTIATAFLGYCCVYGQMSHWGATVITNL 150
Query: 374 LSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPL 553
SAIP++G +V+ + GGF+V N T+ RF+ GS+NPL
Sbjct: 151 FSAIPFVGNDIVSWLWGGFSVSNPTIQRFFALHYLVPFIIAAMVIMHLMALHIHGSSNPL 210
Query: 554 GLNRNLDKIPFHPFFTFKD 610
G+ NLD+IP H +F FKD
Sbjct: 211 GITGNLDRIPMHSYFIFKD 229
>UniRef50_P23134 Cluster: Cytochrome b; n=8595; root|Rep: Cytochrome
b - Rhodospirillum rubrum
Length = 405
Score = 171 bits (417), Expect = 1e-41
Identities = 93/229 (40%), Positives = 124/229 (54%), Gaps = 4/229 (1%)
Frame = +2
Query: 20 NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF 199
N GSL + +II I TG+FL + YTA+++ AF V I R+VNYG ++R +HANGAS FF
Sbjct: 43 NFGSLAGIAMIIMIATGIFLAMSYTAHVDHAFDSVERIMRDVNYGWLMRYMHANGASMFF 102
Query: 200 ICIYLHIGRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 373
I +Y+H+ RG+YY S+ + + YVLP GQ+SFWGATVITNL
Sbjct: 103 IVVYVHMFRGLYYGSYKPPREVLWWLGLVILLLMMATAFMGYVLPWGQMSFWGATVITNL 162
Query: 374 LSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPL 553
SAIP +G +V + GGF+VDN TL RF++ SNNPL
Sbjct: 163 FSAIPVVGDDIVTLLWGGFSVDNPTLNRFFSLHYLFPMLLFAVVFLHMWALHVKKSNNPL 222
Query: 554 GLNRN--LDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNF 694
G++ D IPFHP++T KD P G+PDN+
Sbjct: 223 GIDAKGPFDTIPFHPYYTVKDAFGLGIFLMVFCFFVFFAPNFFGEPDNY 271
>UniRef50_Q9TAE6 Cluster: Cytochrome b; n=1; Anniella
geronimensis|Rep: Cytochrome b - Anniella geronimensis
Length = 262
Score = 165 bits (400), Expect = 1e-39
Identities = 79/137 (57%), Positives = 95/137 (69%)
Frame = +2
Query: 56 QIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIY 235
QIITG+FL ++YT +I +AF V +ICR+V YG ++R LH NGAS FF CIYLHIGRG+Y
Sbjct: 1 QIITGIFLAMHYTPHISLAFSSVAHICRDVQYGWLLRNLHTNGASMFFFCIYLHIGRGLY 60
Query: 236 YESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYLGTILVN* 415
Y S LK YVLP GQ+SFWGATVITNL SA+PY+G LV+
Sbjct: 61 YGSHTLKKTWYTGTMLLLMLMATAFLGYVLPWGQMSFWGATVITNLSSALPYIGPTLVHW 120
Query: 416 I*GGFAVDNATLTRFYT 466
GGFA+DNATLTRF+T
Sbjct: 121 TWGGFAIDNATLTRFFT 137
>UniRef50_Q02761 Cluster: Cytochrome b; n=15; Rhodobacterales|Rep:
Cytochrome b - Rhodobacter sphaeroides (Rhodopseudomonas
sphaeroides)
Length = 445
Score = 163 bits (396), Expect = 4e-39
Identities = 91/233 (39%), Positives = 121/233 (51%), Gaps = 10/233 (4%)
Frame = +2
Query: 26 GSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFIC 205
G +LA CL++QI+TG+ L ++YT ++++AF V +I RNVN G ++R LHANGAS FFI
Sbjct: 48 GVVLAFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIA 107
Query: 206 IYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLS 379
+YLHI RG+YY S+ + + YVLP GQ+SFWGATVIT L
Sbjct: 108 VYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFG 167
Query: 380 AIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGL 559
AIP +G + + GG AVDNATL RF++ TG+NNP G+
Sbjct: 168 AIPGIGHSIQTWLLGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHSTGNNNPTGV 227
Query: 560 --------NRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNF 694
D +PF P+F KD P LG PDN+
Sbjct: 228 EVRRTSKAEAQKDTVPFWPYFIIKDVFALAVVLLVFFAIVGFMPNYLGHPDNY 280
>UniRef50_Q5W910 Cluster: Cytochrome b; n=1; Lingula anatina|Rep:
Cytochrome b - Lingula unguis
Length = 418
Score = 157 bits (382), Expect = 2e-37
Identities = 87/205 (42%), Positives = 115/205 (56%), Gaps = 2/205 (0%)
Frame = +2
Query: 2 NISS**NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN 181
NI++ GSLL L L+ QII+G FL+ +Y A+++ AF + +I R+VNYG +IR H N
Sbjct: 24 NINNWWYFGSLLGLMLVCQIISGFFLSTHYVAHVDYAFDSIVHINRDVNYGALIRGFHIN 83
Query: 182 GASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 361
GAS FF +Y+HIGRGIYY + V YVLP GQ+S+W + V
Sbjct: 84 GASMFFFFMYIHIGRGIYYGCYRQAGVWYTGIILMLLLMATSFLGYVLPWGQMSYWASVV 143
Query: 362 ITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGS 541
IT+LLS IPY+G LV I GGF+V ATLTRFY+ +TGS
Sbjct: 144 ITSLLSTIPYIGPSLVEWIWGGFSVGQATLTRFYSLHFILPFVMVIVVIIHVGLLHETGS 203
Query: 542 NNPLGL--NRNLDKIPFHPFFTFKD 610
+NPLGL + FHP ++ D
Sbjct: 204 SNPLGLYDPSGVCMRSFHPLYSCND 228
>UniRef50_P05418 Cluster: Cytochrome b; n=11;
Alphaproteobacteria|Rep: Cytochrome b - Paracoccus
denitrificans
Length = 440
Score = 156 bits (378), Expect = 6e-37
Identities = 87/233 (37%), Positives = 119/233 (51%), Gaps = 10/233 (4%)
Frame = +2
Query: 26 GSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFIC 205
G +LA CL++QI TG+ L ++YT ++++AF V +I R+VN G ++R LHANGAS FF+
Sbjct: 48 GIVLAFCLVLQIATGIVLVMHYTPHVDLAFASVEHIMRDVNGGYMLRYLHANGASLFFLA 107
Query: 206 IYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLS 379
+Y+HI RG+YY S+ + + YVLP GQ+SFWGATVIT L
Sbjct: 108 VYIHIFRGLYYGSYKAPREVTWIVGMLIYLMMMGTAFMGYVLPWGQMSFWGATVITGLFG 167
Query: 380 AIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGL 559
AIP +G + + GG AVDN TL RF++ TG+NNP G+
Sbjct: 168 AIPGVGEAIQTWLLGGPAVDNPTLNRFFSLHYLLPFVIAALVVVHIWAFHTTGNNNPTGV 227
Query: 560 --------NRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNF 694
D +PF P+F KD P LG PDN+
Sbjct: 228 EVRRGSKEEAKKDTLPFWPYFVIKDLFALAVVLVVFFAIVGFMPNYLGHPDNY 280
>UniRef50_Q4FE09 Cluster: Cytochrome b apoenzyme; n=4;
Pectinidae|Rep: Cytochrome b apoenzyme - Placopecten
magellanicus (Sea scallop)
Length = 395
Score = 155 bits (376), Expect = 1e-36
Identities = 84/231 (36%), Positives = 122/231 (52%)
Frame = +2
Query: 2 NISS**NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN 181
N+S N+GSLL CL+ QI+TG FL+ YYTA+ ++AF V++I + V+ G +R+ H N
Sbjct: 27 NLSVWWNMGSLLGACLVSQILTGWFLSFYYTAHEDLAFSSVSFIMKEVSMGWAMRSFHIN 86
Query: 182 GASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 361
A+F CIY+HIGRG+YY SF L V YVLP GQ+++W A V
Sbjct: 87 VANFMLGCIYVHIGRGLYYGSFRLYKVWASGIILLVLVMLAAFTGYVLPWGQMAYWAAQV 146
Query: 362 ITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGS 541
I+++++AIP +G + + GG+AV N TL R ++ +GS
Sbjct: 147 ISSMVTAIPKVGGEVAMWVWGGYAVGNITLKRLFSVHFLLPFVILAVVLLHLLFLHSSGS 206
Query: 542 NNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNF 694
NPLGL+ + + FH FF+ KD PY L D ++F
Sbjct: 207 GNPLGLDSDCSLVRFHSFFSVKDLLGVSGGCCFLIFMVSFYPYSLVDGESF 257
>UniRef50_P51131 Cluster: Cytochrome b/c1 [Contains: Cytochrome b;
Cytochrome c1]; n=2697; root|Rep: Cytochrome b/c1
[Contains: Cytochrome b; Cytochrome c1] - Bradyrhizobium
japonicum
Length = 687
Score = 153 bits (370), Expect = 5e-36
Identities = 84/227 (37%), Positives = 118/227 (51%), Gaps = 4/227 (1%)
Frame = +2
Query: 26 GSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFIC 205
G++L+ L +QI+TG+ L ++YT + ++AF V I R+VNYG ++R +HA GAS FF
Sbjct: 47 GAILSFMLGMQILTGVILAMHYTPHADLAFKSVELIVRDVNYGWLLRNMHACGASMFFFA 106
Query: 206 IYLHIGRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLS 379
+Y+H+ RG+YY S+ + + + YVLP GQ+SFWGATVITNL S
Sbjct: 107 VYVHMLRGLYYGSYKEPREVLWILGVIIYLLMMATGFMGYVLPWGQMSFWGATVITNLFS 166
Query: 380 AIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGL 559
AIPY G +V + GG++V N TL RF++ G NNP G+
Sbjct: 167 AIPYFGESIVTLLWGGYSVGNPTLNRFFSLHYLLPFLIAGVVVLHVWALHVAGQNNPEGV 226
Query: 560 NRNLDK--IPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNF 694
+K +PF P T KD P LGD DN+
Sbjct: 227 EPKSEKDTVPFTPHATIKDMFGVACFLLLYAWFIFYMPNYLGDADNY 273
>UniRef50_Q2HJL4 Cluster: Cytochrome b; n=1; Campanulotes bidentatus
compar|Rep: Cytochrome b - Campanulotes bidentatus
compar (small pigeon louse)
Length = 374
Score = 149 bits (362), Expect = 5e-35
Identities = 87/225 (38%), Positives = 114/225 (50%)
Frame = +2
Query: 20 NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF 199
N GSLL +CL+IQ+++G+FL+ +Y+ IE AF V I +V +G + R++HANGASFFF
Sbjct: 37 NFGSLLGVCLMIQLVSGIFLSFHYSPTIEEAFSSVVMIVDDVPFGWMFRSIHANGASFFF 96
Query: 200 ICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLS 379
+YLHIGRG+Y + L V + YV P GQI GATVIT+LLS
Sbjct: 97 FWVYLHIGRGLYLSKYKLNPVWMKGVLIFFFLMGTAFMGYVPPWGQIFLGGATVITSLLS 156
Query: 380 AIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGL 559
AIPY+G LV + GGF V TL RF++ NP+G
Sbjct: 157 AIPYMGGFLVKWVWGGFFVKGPTLHRFFSLHYLLPLILSVFVFFQVFFFQSKSGVNPMGG 216
Query: 560 NRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNF 694
+ N K F P+F F D +L DPDNF
Sbjct: 217 SLNSKKGFFVPYFFFVDLGGIFFFFFFFFMFVFVFHDVLMDPDNF 261
>UniRef50_Q8LYW3 Cluster: Apocytochrome b; n=2; Polytomella|Rep:
Apocytochrome b - Polytomella parva
Length = 370
Score = 144 bits (350), Expect = 1e-33
Identities = 81/227 (35%), Positives = 117/227 (51%), Gaps = 2/227 (0%)
Frame = +2
Query: 20 NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF 199
N+GSL L L QI+TG+ L ++Y + +AFY V ++ +V YG +IR H NGAS FF
Sbjct: 31 NMGSLSGLLLASQIVTGILLAMHYCPDTSLAFYSVIHLTVDVPYGFVIRYFHMNGASLFF 90
Query: 200 ICIYLHIGRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 373
+ ++LH+ R +YY S + + + + YVLP GQ+SFWGATVIT+L
Sbjct: 91 VAVFLHLFRNLYYNSGSQPRELLYISGVVILLLMVITAFIGYVLPWGQMSFWGATVITSL 150
Query: 374 LSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPL 553
+SA+P +GT LV + GGF+V N TL RF++ GS NPL
Sbjct: 151 VSAVPIVGTDLVYYLWGGFSVSNPTLNRFFSFHYLLPFVLAGLSIAHLAALHSYGSTNPL 210
Query: 554 GLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNF 694
+N ++ K+PF ++ KD P L DN+
Sbjct: 211 SIN-SVAKVPFGSYYIIKDLLGVLIIGAAMIVLAFFFPEALNHSDNY 256
>UniRef50_Q9B8A8 Cluster: Apocytochrome b; n=1; Trichinella
spiralis|Rep: Apocytochrome b - Trichinella spiralis
(Trichina worm)
Length = 371
Score = 144 bits (349), Expect = 2e-33
Identities = 80/225 (35%), Positives = 114/225 (50%)
Frame = +2
Query: 20 NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF 199
N+GSLL + + IQI+TGL L +Y++ + AF + + R V +G ++R +H NGASF F
Sbjct: 29 NLGSLLGMLMSIQIMTGLLLVMYFSTSESEAFNSIITLMREVKFGFLLRFMHLNGASFIF 88
Query: 200 ICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLS 379
+ +Y H+ +G+ Y SF L L YV+P G +SFW ATVIT+ +S
Sbjct: 89 MTMYAHMFKGLMYSSFMLPGSWLTGNLILFLMILVAFMGYVIPWGNMSFWAATVITSFMS 148
Query: 380 AIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGL 559
AIP LG ++ I GG+++ TL F+T GS+NPLG
Sbjct: 149 AIPILGESILYWIWGGYSITGRTLQFFFTLHYLLPFVISAIAMIHLLLLHSKGSSNPLGT 208
Query: 560 NRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNF 694
+ ++ K FHPFFT KD PY DP+NF
Sbjct: 209 HSHMLKTKFHPFFTNKDMMNIMILMIMGWSLISY-PYWSSDPENF 252
>UniRef50_Q0Z877 Cluster: Cytochrome b; n=7; Mermithidae|Rep:
Cytochrome b - Agamermis sp. BH-2006
Length = 388
Score = 144 bits (348), Expect = 2e-33
Identities = 87/232 (37%), Positives = 120/232 (51%), Gaps = 1/232 (0%)
Frame = +2
Query: 2 NISS**NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN 181
N+S N+GS ++L + IQIITGLFLT YY N E F + I YG ++ +H N
Sbjct: 21 NLSYWWNLGSFVSLIMSIQIITGLFLTFYYE-NSENCFDSIYIIHIETFYGVLVHFIHLN 79
Query: 182 GASFFFICIYLHIGRGIYYESFNL-KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGAT 358
+S F IYLH+ +G+ + SF++ K + YVLP GQ+S WGAT
Sbjct: 80 VSSIIFFLIYLHMTKGLIFSSFSMMKITWISGWIMMMLSMLSAFMGYVLPWGQMSLWGAT 139
Query: 359 VITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTG 538
VITNLLSAIP +G ++V I GG+ V N T+ F++ G
Sbjct: 140 VITNLLSAIPVIGKMMVEWIWGGYFVSNFTMKMFFSFHFLVPFIILIFIMIHLIILHYYG 199
Query: 539 SNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNF 694
SNNP+G N +L KI F+P ++FKD +PY + DP+NF
Sbjct: 200 SNNPIG-NFSLMKIEFNPIYSFKD-LMSIIFIILMFVLFFYSPYFMVDPENF 249
>UniRef50_A4Z9W1 Cluster: Cytochrome b; n=9; Colubroidea|Rep:
Cytochrome b - Hemirhagerrhis hildebrandtii
Length = 366
Score = 143 bits (346), Expect = 4e-33
Identities = 73/142 (51%), Positives = 92/142 (64%)
Frame = +2
Query: 2 NISS**NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN 181
NIS+ N GS+L CL +Q+ TG FL I+YTA++ +AF V +I R+V YG +++ HA
Sbjct: 18 NISTWWNFGSMLLACLALQMTTGFFLAIHYTADVNLAFSSVVHIMRDVPYGWMMQNTHAI 77
Query: 182 GASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 361
GAS FFICIY HI RG+YY S+ K V L YVLP GQ+SFW ATV
Sbjct: 78 GASLFFICIYTHIARGLYYGSYMNKEVWLSGTTLLIILMATAFFGYVLPWGQMSFWAATV 137
Query: 362 ITNLLSAIPYLGTILVN*I*GG 427
ITNLL+AIPYLGT + + GG
Sbjct: 138 ITNLLTAIPYLGTTMTXWLWGG 159
>UniRef50_Q4KRX9 Cluster: Cytochrome b; n=3; Crassostrea|Rep:
Cytochrome b - Crassostrea virginica (Eastern oyster)
Length = 403
Score = 137 bits (332), Expect = 2e-31
Identities = 72/198 (36%), Positives = 108/198 (54%), Gaps = 1/198 (0%)
Frame = +2
Query: 20 NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF 199
N+GS+L L L QI++GL LT+ YTA+ +A ++Y+ R+ NYG IIR+LH GAS FF
Sbjct: 33 NLGSMLFLILGSQILSGLILTMNYTADESLAVVSIDYMMRDANYGWIIRSLHMGGASLFF 92
Query: 200 ICIYLHIGRGIYYESF-NLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLL 376
Y H+ RG++Y ++ +V YVLP G +S+WG TVITN++
Sbjct: 93 ALTYAHVARGVFYGAYLKNPHVWYSGLSLYILSMGVGFLGYVLPWGVMSYWGLTVITNMM 152
Query: 377 SAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLG 556
+ +P G ++ GGF + + TL R + Q GS+NPLG
Sbjct: 153 TVVPG-GARALDWFQGGFVISSLTLKRVFVLHFILPFVILGLALVHVLILHQNGSSNPLG 211
Query: 557 LNRNLDKIPFHPFFTFKD 610
L++ +PFHP+++ KD
Sbjct: 212 LDQEGINVPFHPYYSIKD 229
>UniRef50_Q06SB2 Cluster: Cytochrome b; n=1; Hiatella arctica|Rep:
Cytochrome b - Hiatella arctica
Length = 384
Score = 136 bits (330), Expect = 4e-31
Identities = 77/225 (34%), Positives = 113/225 (50%), Gaps = 1/225 (0%)
Frame = +2
Query: 20 NIGSLLALCLIIQIITGLFLTIYYT-ANIEIAFYRVNYICRNVNYG*IIRTLHANGASFF 196
N GS L+ L +QI++G+ L++YY +E AF + +I R+VN G I+R++H GAS F
Sbjct: 33 NFGSYLSCSLFVQILSGMLLSLYYVPGTMEDAFNSIQFIERDVNGGWILRSVHVAGASSF 92
Query: 197 FICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLL 376
F +Y H+GRG+YY S+ YVLP GQ+SFWGATVI+N L
Sbjct: 93 FFFMYCHVGRGLYYGSYKNFKAWSMGVAILALSMLEGFMGYVLPAGQMSFWGATVISNFL 152
Query: 377 SAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLG 556
+ IP+ G L+ + GG++V + TL+RF+ + G++NPLG
Sbjct: 153 TVIPFFGDTLLKYVLGGYSVCDLTLSRFFVAHFLAPFLISLMVLFHLIWGHEKGASNPLG 212
Query: 557 LNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDN 691
++ D I P + FKD +L DP N
Sbjct: 213 VS-TTDWITLSPGYVFKDLAGGFFMESLVLGMFSSYSWLFQDPTN 256
>UniRef50_P24890 Cluster: Cytochrome b; n=210; Chromadorea|Rep:
Cytochrome b - Caenorhabditis elegans
Length = 370
Score = 136 bits (330), Expect = 4e-31
Identities = 77/197 (39%), Positives = 100/197 (50%)
Frame = +2
Query: 20 NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF 199
N GS+L + LI QI+TG FL YYT + +AF V YI VN+G + R H NGAS FF
Sbjct: 29 NFGSMLGMVLIFQILTGTFLAFYYTPDSLMAFSTVQYIMYEVNFGWVFRIFHFNGASLFF 88
Query: 200 ICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLS 379
I +YLHI +G+++ S+ LK V + YVL Q+SFW A VIT+LLS
Sbjct: 89 IFLYLHIFKGLFFMSYRLKKVWMSGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLS 148
Query: 380 AIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGL 559
IP G +V I GF V ATL F+ TGS + L
Sbjct: 149 VIPIWGPTIVTWIWSGFGVTGATLKFFFVLHFLLPWAILVIVLGHLIFLHSTGSTSSLYC 208
Query: 560 NRNLDKIPFHPFFTFKD 610
+ + DK+ F P + KD
Sbjct: 209 HGDYDKVCFSPEYLGKD 225
>UniRef50_Q8HN51 Cluster: Cytochrome b; n=4; Chromadorea|Rep:
Cytochrome b - Brugia malayi (Filarial nematode worm)
Length = 362
Score = 136 bits (329), Expect = 5e-31
Identities = 79/197 (40%), Positives = 106/197 (53%)
Frame = +2
Query: 20 NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF 199
N GS+L + L+ QIITG FLT YYTA AF V YI VN G ++R +H+NGAS FF
Sbjct: 23 NFGSMLGIMLMSQIITGFFLTFYYTAGD--AFSSVQYIMFEVNLGWLVRIMHSNGASMFF 80
Query: 200 ICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLS 379
+ IYLHI +G+ S+ L V + YVL GQ+S+W A VIT+L++
Sbjct: 81 LFIYLHIFKGLINSSYRLSSVWISGIAMYLVLMGIAFTGYVLIWGQMSYWAAVVITSLMT 140
Query: 380 AIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGL 559
++PYLG +V I G F+V TL FY+ TGS++ L
Sbjct: 141 SVPYLGKYMVWWIWGSFSVCENTLKFFYSIHFIFPWLLLVMVIFHLFFLHFTGSSSSLYC 200
Query: 560 NRNLDKIPFHPFFTFKD 610
+ + DKI F P + FKD
Sbjct: 201 HGDYDKIHFFPSYWFKD 217
>UniRef50_Q9ZZW7 Cluster: Cytochrome b mRNA maturase bI3; n=1;
Saccharomyces cerevisiae|Rep: Cytochrome b mRNA maturase
bI3 - Saccharomyces cerevisiae (Baker's yeast)
Length = 517
Score = 134 bits (325), Expect = 1e-30
Identities = 66/143 (46%), Positives = 97/143 (67%), Gaps = 2/143 (1%)
Frame = +2
Query: 20 NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF 199
N+GSLL LCL+IQI+TG+F+ ++Y++NIE+AF V +I R+V+ G I+R LHANGASFFF
Sbjct: 31 NMGSLLGLCLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFFF 90
Query: 200 ICIYLHIGRGIYYESFNLKYV*L--XXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 373
+ +++H+ +G+YY S+ V L Y GQ+S WGATVITNL
Sbjct: 91 MVMFMHMAKGLYYGSYRSPRVTLWNVGVIIFILTIATAFLGYCCVYGQMSHWGATVITNL 150
Query: 374 LSAIPYLGTILVN*I*GGFAVDN 442
SAIP++G +V+ + GGF +++
Sbjct: 151 FSAIPFVGNDIVSWLWGGFNMED 173
>UniRef50_P03880 Cluster: Intron-encoded DNA endonuclease I-AniI
precursor (mRNA maturase bI1) (COB intron protein)
[Contains: Truncated non-functional cytochrome b; DNA
endonuclease/RNA maturase I-AniI (EC 3.1.-.-)]; n=23;
Fungi/Metazoa group|Rep: Intron-encoded DNA endonuclease
I-AniI precursor (mRNA maturase bI1) (COB intron
protein) [Contains: Truncated non-functional cytochrome
b; DNA endonuclease/RNA maturase I-AniI (EC 3.1.-.-)] -
Emericella nidulans (Aspergillus nidulans)
Length = 488
Score = 131 bits (317), Expect = 1e-29
Identities = 71/148 (47%), Positives = 91/148 (61%), Gaps = 2/148 (1%)
Frame = +2
Query: 2 NISS**NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN 181
N+S N GSLLALCL IQI+TG+ L ++YT ++ AF V +I R+VN G ++R LH+N
Sbjct: 25 NLSYLWNFGSLLALCLGIQIVTGVTLAMHYTPSVSEAFNSVEHIMRDVNNGWLVRYLHSN 84
Query: 182 GASFFFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGA 355
AS FF +YLHIGRG+YY S+ YVLP GQ+S WGA
Sbjct: 85 TASAFFFLVYLHIGRGLYYGSYKTPRTLTWAIGTVILIVMMATAFLGYVLPYGQMSLWGA 144
Query: 356 TVITNLLSAIPYLGTILVN*I*GGFAVD 439
TVITNL+SAIP++G +V I GG D
Sbjct: 145 TVITNLMSAIPWIGQDIVEFIWGGLYTD 172
>UniRef50_A1W459 Cluster: Cytochrome b/b6, N-terminal domain; n=64;
cellular organisms|Rep: Cytochrome b/b6, N-terminal
domain - Acidovorax sp. (strain JS42)
Length = 473
Score = 130 bits (315), Expect = 2e-29
Identities = 78/210 (37%), Positives = 109/210 (51%), Gaps = 15/210 (7%)
Frame = +2
Query: 26 GSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFIC 205
GSL L L+IQI+TG+FL ++Y + AF V YI R+V +G +IR +H+ GAS FF+
Sbjct: 55 GSLALLVLVIQIVTGIFLVMHYKPDAAKAFESVEYIMRDVPWGWLIRYMHSTGASAFFVV 114
Query: 206 IYLHIGRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLS 379
+YLH+ RG+ Y S+ + V + Y+LP GQ+S+WGA VI NL S
Sbjct: 115 VYLHMFRGLLYGSYRKPRELVWIFGCAIFLALMAEAFMGYLLPWGQMSYWGAQVIVNLFS 174
Query: 380 AIPYLGTILVN*I*GGFAVDNATLTRFYT-XXXXXXXXXXXXXXXXXXXXXQTGSNNPLG 556
AIP++G L I G + V +ATL RF++ GSNNP G
Sbjct: 175 AIPFIGPDLALLIRGDYVVSDATLNRFFSFHVIAVPLVLLGLVVAHLLALHDVGSNNPDG 234
Query: 557 L------------NRNLDKIPFHPFFTFKD 610
+ LD +PFHP++T D
Sbjct: 235 IEIKGPGKPVDEHGHPLDGVPFHPYYTVHD 264
>UniRef50_Q5DNB7 Cluster: Cytochrome b; n=1; Leptorhynchoides
thecatus|Rep: Cytochrome b - Leptorhynchoides thecatus
Length = 372
Score = 130 bits (315), Expect = 2e-29
Identities = 79/223 (35%), Positives = 108/223 (48%)
Frame = +2
Query: 26 GSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFIC 205
GS+L L IQII+GL L+ +Y ++ F + I ++V G IR +H++G S F
Sbjct: 30 GSMLGLIYSIQIISGLILSWFYFIDLSGGFKSLILIMQDVWGGWFIRFIHSSGVSLFMFI 89
Query: 206 IYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAI 385
+YLHI RG+ Y SF V YVLP G +S+WG TV+TN+LSAI
Sbjct: 90 MYLHILRGLIYGSFCKVDVWYSGILLLFICMGSAFLGYVLPWGSMSYWGMTVVTNMLSAI 149
Query: 386 PYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNR 565
P +G LV I GG + +TL RF++ + GS+NPLG+
Sbjct: 150 PMVGVYLVETIWGGSSAGVSTLVRFFSFHYLLSLFIMVFILIHLILLHECGSSNPLGVYY 209
Query: 566 NLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNF 694
+ +K FHP F+ KD PYLL D NF
Sbjct: 210 SCEKFTFHPLFSLKDTLVFVLVVFLYWFCIFVCPYLLLDAINF 252
>UniRef50_A5D6K1 Cluster: Apocytochrome b; n=10; Arthropoda|Rep:
Apocytochrome b - Bothropolys sp. SP-2004
Length = 378
Score = 130 bits (314), Expect = 3e-29
Identities = 63/126 (50%), Positives = 78/126 (61%)
Frame = +2
Query: 317 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 496
YVLP GQ+SFWGATVITNL+SA+PY+GT++V + GGFAVDNATLTRF++
Sbjct: 133 YVLPWGQMSFWGATVITNLVSAVPYMGTMIVQWLWGGFAVDNATLTRFFSFHFILPFIIA 192
Query: 497 XXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLL 676
QTGSNNP G+++NLDK+ FHPFF+ KD PY L
Sbjct: 193 AMVILHLLFLHQTGSNNPAGMSKNLDKVSFHPFFSVKDSMGFIMLISFYMFISLMLPYDL 252
Query: 677 GDPDNF 694
GD +NF
Sbjct: 253 GDSENF 258
Score = 33.9 bits (74), Expect = 3.8
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +1
Query: 1 EYFFLMKYRIPTSFMSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC* 180
++ +K+RI S M + N+ IIF+N L Y N S L+ K + ++ + ITC
Sbjct: 28 KFILHVKFRILISIMFSYPNHNSIIFSNTLFRSYYNCLWYSNLHFTKRQHSMSYTCITCK 87
Query: 181 WSFIFFYLHLFTYRTRNL 234
YL + + + N+
Sbjct: 88 RGINLLYLFMSSRWSSNM 105
>UniRef50_O31215 Cluster: Cytochrome b; n=132; cellular
organisms|Rep: Cytochrome b - Chromatium vinosum
(Allochromatium vinosum)
Length = 411
Score = 128 bits (310), Expect = 1e-28
Identities = 78/210 (37%), Positives = 110/210 (52%), Gaps = 15/210 (7%)
Frame = +2
Query: 26 GSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFIC 205
GSL L L+IQI+TG++L + Y + +AF V YI R+V++G +IR +H+ GAS FFI
Sbjct: 42 GSLAILTLVIQIVTGVWLAMSYKPDAGLAFASVEYIMRDVDWGWLIRYMHSTGASMFFIV 101
Query: 206 IYLHIGRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLS 379
IYLH+ RG+ S+ + + + Y+LP GQ+S+WGA VI NL +
Sbjct: 102 IYLHMFRGLLRGSYRKPRELLWMIGVVIYLVMMATAFFGYLLPWGQMSYWGAQVIVNLFA 161
Query: 380 AIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGL 559
A+P +G L + G F + +ATL RF+ GSNNP G+
Sbjct: 162 AVPVVGEDLSVWVRGDFVISDATLNRFFAFHFLLPFLLAGLVFLHIVALHHVGSNNPDGI 221
Query: 560 --------NRNLDK-----IPFHPFFTFKD 610
NR DK IPFHP++T KD
Sbjct: 222 EIKEGPKGNRWSDKAPADGIPFHPYYTVKD 251
>UniRef50_Q8SHP6 Cluster: Apocytochrome B; n=1; Hypocrea
jecorina|Rep: Apocytochrome B - Trichoderma reesei
(Hypocrea jecorina)
Length = 427
Score = 128 bits (308), Expect = 2e-28
Identities = 69/142 (48%), Positives = 90/142 (63%)
Frame = +2
Query: 2 NISS**NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN 181
NIS N GSLLA+CLIIQI+TG+ L ++Y ++ AF + +I R+VN G +IR LH+N
Sbjct: 25 NISYLWNFGSLLAVCLIIQIVTGVTLAMHYNPSVAEAFNSIEHIMRDVNNGWLIRYLHSN 84
Query: 182 GASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 361
AS FF +YLHIGRG+YY S+ YVLP GQ+S WGATV
Sbjct: 85 TASAFFFLVYLHIGRGLYYASYR------------APRTLAWVSLYVLPYGQMSLWGATV 132
Query: 362 ITNLLSAIPYLGTILVN*I*GG 427
ITNL+SAIP++G +V + GG
Sbjct: 133 ITNLISAIPWIGQDIVEFVWGG 154
Score = 46.4 bits (105), Expect = 7e-04
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = +2
Query: 431 AVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQT-GSNNPLGLNRNLDKIPFHPFFTFK 607
+V+NATL RF+ T G++NPLG+ D+IPF P+F FK
Sbjct: 208 SVNNATLNRFFALHFVLPFVLAALALMHLIAVHDTAGASNPLGVPGYYDRIPFAPYFLFK 267
Query: 608 DXXXXXXXXXXXXXXXXXNPYLLGDPDNF 694
D P +LGD +N+
Sbjct: 268 DLVTIFIFLFGLSLFVFFMPNVLGDSENY 296
>UniRef50_Q8M4X4 Cluster: Cytochrome b; n=76; Dinophyceae|Rep:
Cytochrome b - Pfiesteria piscicida
Length = 374
Score = 125 bits (302), Expect = 9e-28
Identities = 73/198 (36%), Positives = 104/198 (52%), Gaps = 1/198 (0%)
Frame = +2
Query: 20 NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF 199
N G LL + +I+QIITG+ L ++YT+++ A++ + ++ R V YG +R H++GASF F
Sbjct: 39 NFGFLLGVAIILQIITGILLALHYTSDLNSAYFSLFFLIREVFYGWCLRYFHSSGASFVF 98
Query: 200 ICIYLHIGRGIYYES-FNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLL 376
+ ++LH+GR ++Y S F YVLP GQ+SFWGATVITNLL
Sbjct: 99 LFLFLHLGRAMFYGSYFYNPNTWFSGIILFLFLMAIAFMGYVLPFGQMSFWGATVITNLL 158
Query: 377 SAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLG 556
S P L+ + GG+ V + TL RF+ SNNPL
Sbjct: 159 SPFP----SLIEWVSGGYCVHSPTLKRFFLFHYQLPFLVCGFSILHLFYLHFLSSNNPLR 214
Query: 557 LNRNLDKIPFHPFFTFKD 610
+ N +KIPF P KD
Sbjct: 215 NSTN-NKIPFFPLIFDKD 231
>UniRef50_Q959C6 Cluster: Cytochrome b; n=28; Coelomata|Rep:
Cytochrome b - Galaxias sp. 'teviot'
Length = 386
Score = 125 bits (301), Expect = 1e-27
Identities = 62/126 (49%), Positives = 75/126 (59%)
Frame = +2
Query: 317 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXX 496
YVLP GQ+SFWGATVITNLLSA+PY+G LV I GGF+VDNATLTRF+
Sbjct: 132 YVLPWGQMSFWGATVITNLLSAVPYVGNDLVQWIWGGFSVDNATLTRFFAFHFLFPFVIA 191
Query: 497 XXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLL 676
+TGSNNP GLN + DKI FHP+F++KD +P +L
Sbjct: 192 GATVLHLLFLHETGSNNPAGLNSDADKISFHPYFSYKDLLGFVALLLALTSLALFSPNML 251
Query: 677 GDPDNF 694
GD +NF
Sbjct: 252 GDSENF 257
>UniRef50_Q02768 Cluster: Cytochrome b; n=889; Apicomplexa|Rep:
Cytochrome b - Plasmodium falciparum
Length = 376
Score = 123 bits (297), Expect = 4e-27
Identities = 76/197 (38%), Positives = 99/197 (50%)
Frame = +2
Query: 2 NISS**NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN 181
NI+ N G LL + IQIITG+FL YT ++ A+Y + +I R + G R +HA
Sbjct: 21 NINFLWNYGFLLGIIFFIQIITGVFLASRYTPDVSYAYYSIQHILRELWSGWCFRYMHAT 80
Query: 182 GASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 361
GAS F+ YLHI RG+ Y L + YVLP GQ+S+WGATV
Sbjct: 81 GASLVFLLTYLHILRGLNYSYMYLPLSWISGLILFMIFIVTAFVGYVLPWGQMSYWGATV 140
Query: 362 ITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGS 541
ITNLLS+IP + V I GG+ V + T+ RF+ GS
Sbjct: 141 ITNLLSSIP----VAVIWICGGYTVSDPTIKRFFVLHFILPFIGLCIVFIHIFFLHLHGS 196
Query: 542 NNPLGLNRNLDKIPFHP 592
NPLG + L KIPF+P
Sbjct: 197 TNPLGYDTAL-KIPFYP 212
>UniRef50_A1BQ48 Cluster: Cytochrome b; n=105; Clupeocephala|Rep:
Cytochrome b - Priapella chamulae
Length = 256
Score = 123 bits (296), Expect = 5e-27
Identities = 56/85 (65%), Positives = 68/85 (80%)
Frame = +2
Query: 2 NISS**NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN 181
NIS+ N GSLL LCLI QI+TGLFL ++YT++I AF V +ICR+VNYG +IR +HAN
Sbjct: 26 NISAWWNFGSLLGLCLIAQILTGLFLAMHYTSDISTAFSSVTHICRDVNYGWLIRNMHAN 85
Query: 182 GASFFFICIYLHIGRGIYYESFNLK 256
GASFFFICIY HIGRG+YY S+ K
Sbjct: 86 GASFFFICIYFHIGRGLYYGSYLYK 110
>UniRef50_Q94NM9 Cluster: Cytochrome b; n=4; Cricetidae|Rep:
Cytochrome b - Lemmus lemmus (Norway lemming)
Length = 211
Score = 122 bits (293), Expect = 1e-26
Identities = 54/84 (64%), Positives = 69/84 (82%)
Frame = +2
Query: 2 NISS**NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN 181
NISS N GSLL LCLIIQI+TGLFL ++YT++ AF V +ICR+VNYG +IR +HAN
Sbjct: 7 NISSWWNFGSLLGLCLIIQILTGLFLAMHYTSDTATAFSSVAHICRDVNYGWLIRYMHAN 66
Query: 182 GASFFFICIYLHIGRGIYYESFNL 253
GAS FFIC++LH+GRG+YY S+N+
Sbjct: 67 GASMFFICLFLHVGRGVYYGSYNM 90
Score = 60.1 bits (139), Expect = 5e-08
Identities = 26/55 (47%), Positives = 32/55 (58%)
Frame = +2
Query: 530 QTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNF 694
+TGSNNP GLN + DKIPFHP++T KD P +LGDPDN+
Sbjct: 121 ETGSNNPTGLNSDADKIPFHPYYTIKDLLGALLLLMALMILVLFFPDILGDPDNY 175
>UniRef50_Q5NNX9 Cluster: Cytochrome b subunit; n=1; Zymomonas
mobilis|Rep: Cytochrome b subunit - Zymomonas mobilis
Length = 418
Score = 119 bits (287), Expect = 6e-26
Identities = 73/229 (31%), Positives = 105/229 (45%), Gaps = 4/229 (1%)
Frame = +2
Query: 20 NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF 199
N G L + L IQIITGL L ++Y A+ AF + I R V +G +IR H GAS FF
Sbjct: 47 NFGVLAGIALTIQIITGLALAMHYVASSNEAFNSIEAIMRYVGFGWLIRYGHMVGASLFF 106
Query: 200 ICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 373
+Y+H+ RG+YY S+ + V L Y L GQ+S+W A VIT L
Sbjct: 107 AALYIHMFRGVYYGSYKAPREVVWLIGVLLFMLAMATAFLGYSLVWGQMSYWAAQVITGL 166
Query: 374 LSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPL 553
S +P++G + + GGFA + AT+ RF+ + GS NP
Sbjct: 167 FSVVPFVGEKIRIWVLGGFAPNAATVNRFFVLHFTLPFVILAVVGLHVWALHRQGSGNPT 226
Query: 554 GL--NRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNF 694
G+ + + +P P++ KD P + DPDN+
Sbjct: 227 GIEVKKAEEVVPMQPYYIAKDFVAICVFLLIFCSLVFFYPNVFTDPDNY 275
>UniRef50_Q5FTF2 Cluster: Ubiquinol-cytochrome c reductase
cytochrome b subunit; n=1; Gluconobacter oxydans|Rep:
Ubiquinol-cytochrome c reductase cytochrome b subunit -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 392
Score = 116 bits (279), Expect = 5e-25
Identities = 69/207 (33%), Positives = 100/207 (48%), Gaps = 4/207 (1%)
Frame = +2
Query: 2 NISS**NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN 181
N+++ + G+ L + + I +GLFL I YT +I AF V I R V G IR+LH
Sbjct: 38 NLNALWSFGAFLIVTMAFMIASGLFLAINYTPDITQAFASVEAIDRQVPSGWFIRSLHMG 97
Query: 182 GASFFFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGA 355
G + F C+Y+HIGR ++Y S+ + + L YVLP GQ+S+WGA
Sbjct: 98 GVTMLFACLYIHIGRSLWYGSYKAPRELLWLTGLGLMLMVMVTAFAGYVLPWGQMSYWGA 157
Query: 356 TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQT 535
TVI N + AIP +G L + GG + N L R +
Sbjct: 158 TVILNAVHAIPLIGQPLSELLLGGDTLGNVALHRLFVLHFTMAFAILGVIALHVAALHVV 217
Query: 536 GSNNPLGLN--RNLDKIPFHPFFTFKD 610
SNNP G++ +PFHP++T +D
Sbjct: 218 KSNNPSGVDPVNPSQTLPFHPYYTSRD 244
>UniRef50_Q9PEW9 Cluster: Ubiquinol cytochrome C oxidoreductase,
cytochrome B subunit; n=20; cellular organisms|Rep:
Ubiquinol cytochrome C oxidoreductase, cytochrome B
subunit - Xylella fastidiosa
Length = 420
Score = 115 bits (277), Expect = 1e-24
Identities = 73/212 (34%), Positives = 107/212 (50%), Gaps = 17/212 (8%)
Frame = +2
Query: 26 GSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNY-ICRNVNYG*IIRTLHANGASFFFI 202
GSLL + L+ Q++TG+FL ++Y ++ AF + I R+V +G +IR +H+ GAS FFI
Sbjct: 47 GSLLLVVLVNQVVTGIFLAMHYKPSVAEAFQSIEMTIMRDVEWGWLIRYMHSTGASLFFI 106
Query: 203 CIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLL 376
+YLH+ RG+ Y S + V + YVLP GQ+SFWGA VI +L
Sbjct: 107 GVYLHMFRGLIYGSGKKPRELVWVLGMLMYVVLMVEAFVGYVLPWGQVSFWGAKVIISLF 166
Query: 377 SAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQ-TGSNNPL 553
AIP +G L I G + + TL RF+ + GSNNP
Sbjct: 167 GAIPVIGNGLDEWIMGDYLPSDVTLNRFFALHVIALPLLLGFLVVLHLVALRGVGSNNPD 226
Query: 554 GLN-------------RNLDKIPFHPFFTFKD 610
G++ ++ D IPFHP++T K+
Sbjct: 227 GIDIHQGPKGNRWDSMQSADSIPFHPYYTLKE 258
>UniRef50_Q0H8X2 Cluster: Probable intron-encoded endonuclease bI1
precursor [Contains: Truncated non-functional cytochrome
b; Intron-encoded endonuclease bI1 (EC 3.1.-.-)]; n=2;
Ustilago maydis|Rep: Probable intron-encoded
endonuclease bI1 precursor [Contains: Truncated
non-functional cytochrome b; Intron-encoded endonuclease
bI1 (EC 3.1.-.-)] - Ustilago maydis (Smut fungus)
Length = 410
Score = 111 bits (268), Expect = 1e-23
Identities = 51/82 (62%), Positives = 66/82 (80%)
Frame = +2
Query: 2 NISS**NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN 181
NIS N GSLL +CLIIQI+TG+FL ++YT ++++AF V +I R+VNYG +IR LHAN
Sbjct: 25 NISYMWNFGSLLGVCLIIQILTGVFLAMHYTPSVDLAFISVEHIMRDVNYGWLIRYLHAN 84
Query: 182 GASFFFICIYLHIGRGIYYESF 247
ASFFFI +YLHIGRG+YY S+
Sbjct: 85 TASFFFIFVYLHIGRGLYYGSY 106
>UniRef50_Q3YFJ1 Cluster: Cytochrome b; n=27; Coelomata|Rep:
Cytochrome b - Laonastes aenigmamus (Laotian rock rat)
Length = 378
Score = 111 bits (267), Expect = 2e-23
Identities = 48/79 (60%), Positives = 62/79 (78%)
Frame = +2
Query: 20 NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF 199
N GSLL +CL++QIITGLFL ++YTA+ AF + +ICR+VNYG +IR HANGAS FF
Sbjct: 32 NFGSLLGVCLLLQIITGLFLAMHYTADTTSAFSSIAHICRDVNYGWVIRYTHANGASMFF 91
Query: 200 ICIYLHIGRGIYYESFNLK 256
IC+Y+HI RG+YY S+ K
Sbjct: 92 ICLYIHIARGLYYGSYLFK 110
>UniRef50_Q8M370 Cluster: Cytochrome b; n=46; Neoptera|Rep:
Cytochrome b - Procladius villosimanus
Length = 233
Score = 110 bits (264), Expect = 4e-23
Identities = 56/112 (50%), Positives = 64/112 (57%)
Frame = +2
Query: 359 VITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTG 538
VITNLLSAIPYLG L + GGFAVDNATLTRF+ QTG
Sbjct: 1 VITNLLSAIPYLGNELXQWLWGGFAVDNATLTRFFXFHFLFPFIIAALTTIHLLFLHQTG 60
Query: 539 SNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNF 694
S NPLG+N N+DKIPFHP+FT+KD +PY +GDPDNF
Sbjct: 61 SPNPLGINSNVDKIPFHPYFTYKDIFGFVAMTMILIMLTLISPYGMGDPDNF 112
>UniRef50_A1C1A8 Cluster: Apocytochrome b; n=88; Magnoliophyta|Rep:
Apocytochrome b - Doryphora sassafras
Length = 347
Score = 106 bits (255), Expect = 4e-22
Identities = 82/232 (35%), Positives = 116/232 (50%), Gaps = 2/232 (0%)
Frame = +2
Query: 2 NISS**NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN 181
N+S G L + L+IQI+TG+FL +++T ++++AF V ++ R+V G ++R +HAN
Sbjct: 17 NLSYWWGFGPLAGISLVIQIVTGVFLAMHHTPHVDLAFNSVEHVMRDVEGGWLLRYMHAN 76
Query: 182 GASFFFICIYLHIGRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGA 355
GAS F I ++L I RG ++ ++V GQ+SFWG
Sbjct: 77 GASMFLIVVHLXIFRGXXXXXYSSXXEFVRCXGVVXXXXMIVXAXXGXXPXXGQMSFWGX 136
Query: 356 TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQT 535
+ AI +G V GF+VD TL + Q
Sbjct: 137 XXXXSXXXAIXXVGDTXVTXXXXGFSVDXXTLNXXXSLHHXLPLILVGASLLHLAALHQY 196
Query: 536 GSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDN 691
GSNNPLG++ +DKI +P+F KD G PDN
Sbjct: 197 GSNNPLGVHSEMDKIAPYPYFYVKDLVGRVASAIFSSXXXXXXXXXXGHPDN 248
>UniRef50_Q6TY86 Cluster: Cytochrome b; n=1; Xiphinema
americanum|Rep: Cytochrome b - Xiphinema americanum
Length = 366
Score = 105 bits (252), Expect = 1e-21
Identities = 75/224 (33%), Positives = 105/224 (46%), Gaps = 1/224 (0%)
Frame = +2
Query: 26 GSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFIC 205
GSLL + + IQ+ +GL L Y++ +A+ V I R V G ++R++H+N ASF F
Sbjct: 28 GSLLGILMAIQVASGLILAFCYSSGF-LAWSSVVEITREVYAGWLVRSIHSNTASFVFFL 86
Query: 206 IYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAI 385
+++H RGI SF L + YVLP GQ+SFWGATVI NLLS +
Sbjct: 87 MFMHFFRGIIQSSFYLVLPWISGFVLMLLTMAAAFLGYVLPWGQMSFWGATVIINLLSIL 146
Query: 386 PYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNR 565
PY G +LV + GGF V AT + F+ +GS++ G+N
Sbjct: 147 PY-GKMLVVWLWGGFYVSAATCSFFFALHYIVPFAVLVVIMVHLFFLHFSGSSSFGGMNY 205
Query: 566 NLD-KIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNF 694
+ K+ F F+ KD P L DP NF
Sbjct: 206 SDSLKVKFGLLFSLKDMVNVIFIWVGFLVILSM-PDLFSDPVNF 248
>UniRef50_Q36099 Cluster: Cytochrome b; n=12; Piroplasmida|Rep:
Cytochrome b - Theileria parva
Length = 363
Score = 105 bits (252), Expect = 1e-21
Identities = 64/203 (31%), Positives = 96/203 (47%)
Frame = +2
Query: 2 NISS**NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN 181
N++S N+G +L + LI+QI++GL LT +Y E AF ++ + +G +R H+
Sbjct: 16 NLNSNWNVGFILGILLILQILSGLLLTFFYVPCKEGAFESLSRLVTETQFGWFVRLYHSV 75
Query: 182 GASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 361
G SF+F +++HI +G++Y S + + YVLP GQ+SFWGATV
Sbjct: 76 GVSFYFFFMFIHIIKGMWYSSKYMPWSWYSGIVILILSIVIAFTGYVLPDGQMSFWGATV 135
Query: 362 ITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGS 541
I+NLL I GGF V TL RF+ + GS
Sbjct: 136 ISNLLEWFGKAKVITF----GGFTVGPETLKRFFILHFVLPAVVLVIVLLHLYFLHREGS 191
Query: 542 NNPLGLNRNLDKIPFHPFFTFKD 610
+NPL L + + F+ F D
Sbjct: 192 SNPLTLAEAVALLKFYQLILFSD 214
>UniRef50_Q9KIW3 Cluster: Putative cytochrome b precursor; n=7;
Acidithiobacillus ferrooxidans|Rep: Putative cytochrome
b precursor - Thiobacillus ferrooxidans
(Acidithiobacillus ferrooxidans)
Length = 402
Score = 104 bits (250), Expect = 2e-21
Identities = 65/207 (31%), Positives = 98/207 (47%), Gaps = 12/207 (5%)
Frame = +2
Query: 26 GSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFIC 205
GSLL L +++Q+I+G FL +Y + AF V I + +G +IR +H +G S FI
Sbjct: 38 GSLLLLMIVLQLISGFFLMAHYVPTSQDAFASVQGIMYDTKWGWLIRYMHVDGVSLIFIL 97
Query: 206 IYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLS 379
+Y H+ RG+ Y S + V + YVLP G +S+W VIT+++
Sbjct: 98 LYTHMFRGLLYGSHRAPRELVWVIGYVIYLLMMAEAFVGYVLPFGNLSYWAGEVITSIMH 157
Query: 380 AIPYLGTILVN*I*GGFAVDNATLTRFYT-XXXXXXXXXXXXXXXXXXXXXQTGSNNPLG 556
A+P +G L GG + +ATL R + GSNNP G
Sbjct: 158 ALPVVGPSLTTLTRGGPGIGSATLQRLLALHVVLFFLIILAAIALHIVALHRVGSNNPDG 217
Query: 557 LN---------RNLDKIPFHPFFTFKD 610
++ + LD +PFHP++T KD
Sbjct: 218 IDIKKHKGPDGKPLDGVPFHPYYTVKD 244
>UniRef50_P03873 Cluster: Cytochrome b mRNA maturase bI2; n=4;
Saccharomycetales|Rep: Cytochrome b mRNA maturase bI2 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 423
Score = 103 bits (246), Expect = 5e-21
Identities = 50/113 (44%), Positives = 73/113 (64%), Gaps = 2/113 (1%)
Frame = +2
Query: 20 NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF 199
N+GSLL LCL+IQI+TG+F+ ++Y++NIE+AF V +I R+V+ G I+R LHANGASFFF
Sbjct: 31 NMGSLLGLCLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFFF 90
Query: 200 ICIYLHIGRGIYYESFNLKYV*L--XXXXXXXXXXXXXXXXYVLP*GQISFWG 352
+ +++H+ +G+YY S+ V L Y GQ+S WG
Sbjct: 91 MVMFMHMAKGLYYGSYRSPRVTLWNVGVIIFILTIATAFLGYCCVYGQMSHWG 143
>UniRef50_A6Q5D2 Cluster: Ubiquinol cytochrome c oxidoreductase,
cytochrome b subunit; n=26; Epsilonproteobacteria|Rep:
Ubiquinol cytochrome c oxidoreductase, cytochrome b
subunit - Nitratiruptor sp. (strain SB155-2)
Length = 465
Score = 102 bits (245), Expect = 7e-21
Identities = 58/150 (38%), Positives = 85/150 (56%), Gaps = 3/150 (2%)
Frame = +2
Query: 23 IGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNY-ICRNVNYG*IIRTLHANGASFFF 199
+G +L I +I+G+FL +YY + ++AF VNY I + V +G + R +HA AS F
Sbjct: 43 MGVVLMTMFTILLISGIFLLMYYKPDTKLAFDSVNYTIMQEVWFGWLWRHMHAVAASVVF 102
Query: 200 ICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 373
+ IY+H+ GIYY S+ + + + Y+LP GQ+S+W A VITNL
Sbjct: 103 LVIYIHMFTGIYYASYKRGREMIWISGMLLFVTFSAEAFSGYMLPWGQMSYWAAQVITNL 162
Query: 374 LSAIPYLGTILVN*I*GGFAVDNATLTRFY 463
IP++G LV I G F V + TLTRF+
Sbjct: 163 FGGIPFIGDDLVVWIRGNFYVSDPTLTRFF 192
>UniRef50_Q94R91 Cluster: Cytochrome b; n=1; Sycoscapter sp.
402|Rep: Cytochrome b - Sycoscapter sp. 402
Length = 157
Score = 100 bits (240), Expect = 3e-20
Identities = 51/120 (42%), Positives = 68/120 (56%)
Frame = +2
Query: 326 P*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXX 505
P GQ+SFWGATVITNL+SAI Y+G +V + GGF+V +ATL RFYT
Sbjct: 2 PWGQMSFWGATVITNLVSAISYVGESVVLWMWGGFSVSDATLNRFYTFHFISDFVILFLV 61
Query: 506 XXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDP 685
QTGS NP+GLN N++KIPF+P+++ +D +PY+L P
Sbjct: 62 LIHLVFLHQTGSTNPMGLNSNMNKIPFNPYYSIQDLLGFIILIISFILICFLSPYILPIP 121
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 100 bits (240), Expect = 3e-20
Identities = 56/131 (42%), Positives = 70/131 (53%)
Frame = +2
Query: 2 NISS**NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN 181
NI+ N G LL + IQI+TG+FL Y+ I A+Y + +I R + G R +HA
Sbjct: 187 NINFLWNYGFLLGIIFFIQILTGVFLASRYSPEISYAYYSIQHILRELWSGWCFRYMHAT 246
Query: 182 GASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 361
GAS F YLHI RG+ Y L + YVLP GQ+S+WGATV
Sbjct: 247 GASLVFFLTYLHILRGLNYSYLYLPLSWISGLIIFALFIVTAFIGYVLPWGQMSYWGATV 306
Query: 362 ITNLLSAIPYL 394
ITNLLS IP L
Sbjct: 307 ITNLLSGIPAL 317
>UniRef50_UPI00015C5733 Cluster: hypothetical protein CKO_01262;
n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
protein CKO_01262 - Citrobacter koseri ATCC BAA-895
Length = 390
Score = 98.7 bits (235), Expect = 1e-19
Identities = 54/149 (36%), Positives = 80/149 (53%), Gaps = 2/149 (1%)
Frame = +2
Query: 23 IGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFI 202
+G +L + L +QI++GL L ++Y +AF + +I R+V +G ++R H+ GAS FF
Sbjct: 31 VGIILLVMLGVQILSGLVLAMFYVPTEGLAFDSIIHIMRSVRHGELVRNAHSIGASLFFF 90
Query: 203 CIYLHIGRGIYYESFNLKY--V*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLL 376
YLHI R +YY + Y + + Y L GQ S+W ATVIT
Sbjct: 91 ACYLHIFRAMYYNVYRKPYLKMWMISVTLYVLLMITAFLGYSLIWGQKSYWAATVITGFT 150
Query: 377 SAIPYLGTILVN*I*GGFAVDNATLTRFY 463
AIP++G L + + GG+A TL RFY
Sbjct: 151 RAIPWVGDTLYSFLVGGYAPGTPTLGRFY 179
>UniRef50_Q35127 Cluster: Cytochrome b; n=7; Fungi/Metazoa
group|Rep: Cytochrome b - Neurospora crassa
Length = 448
Score = 95.5 bits (227), Expect = 1e-18
Identities = 45/82 (54%), Positives = 60/82 (73%)
Frame = +2
Query: 2 NISS**NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN 181
NIS N GSLLA CLIIQI+TG+ L ++Y+ N+ AF + +I R+VN G ++R LH+N
Sbjct: 25 NISYLWNFGSLLACCLIIQIVTGVTLAMHYSPNVLEAFNSIEHIMRDVNNGWLVRYLHSN 84
Query: 182 GASFFFICIYLHIGRGIYYESF 247
AS FF +YLHIGRG+YY S+
Sbjct: 85 TASAFFFLVYLHIGRGMYYGSY 106
>UniRef50_Q85PH8 Cluster: Cytochrome b; n=1; Dendrobates
reticulatus|Rep: Cytochrome b - Dendrobates reticulatus
(redback poison frog)
Length = 109
Score = 94.7 bits (225), Expect = 2e-18
Identities = 51/91 (56%), Positives = 60/91 (65%), Gaps = 20/91 (21%)
Frame = +2
Query: 35 LALCLIIQIITGLFLTIYYTANIEIAFYR--------------------VNYICRNVNYG 154
L LCLI QIITGLFL ++YTA+ +AF V +ICR+VNYG
Sbjct: 1 LGLCLIAQIITGLFLAMHYTADTSMAFSSIAHICRDVNNGWLLRSLLSSVAHICRDVNYG 60
Query: 155 *IIRTLHANGASFFFICIYLHIGRGIYYESF 247
++R LHANGASFFFICIYLHIGRG+YY SF
Sbjct: 61 WLLRNLHANGASFFFICIYLHIGRGMYYGSF 91
>UniRef50_P81376 Cluster: Cytochrome b; n=1; Plasmodium
gallinaceum|Rep: Cytochrome b - Plasmodium gallinaceum
Length = 300
Score = 91.5 bits (217), Expect = 2e-17
Identities = 60/155 (38%), Positives = 78/155 (50%), Gaps = 1/155 (0%)
Frame = +2
Query: 2 NISS**NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN 181
NI+ N G LL + IQI+ G+ L + + A+Y V +I R + G R +HA
Sbjct: 21 NINFLWNYGFLLGIVFFIQILKGVLLALVILQKLSYAYYSVQHILRAIMDGWCFRYMHAT 80
Query: 182 GASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATV 361
GASF FI YLHI RG+ Y L + YVLP GQ+SFW TV
Sbjct: 81 GASFVFILTYLHILRGLNYSYSYLPLSWISGLMIFLISIVTAFYGYVLPWGQMSFWNTTV 140
Query: 362 ITNLLSAIPYL-GTILVN*I*GGFAVDNATLTRFY 463
ITNLL YL T ++ GG+ V + TL RF+
Sbjct: 141 ITNLL----YLFRTCFMD--CGGYLVSDPTLKRFF 169
>UniRef50_Q1HTY3 Cluster: Cytochrome oxidase B; n=11;
Stolidobranchia|Rep: Cytochrome oxidase B - Polycarpa
papillata
Length = 141
Score = 88.6 bits (210), Expect = 1e-16
Identities = 49/121 (40%), Positives = 61/121 (50%)
Frame = +2
Query: 332 GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXX 511
GQ+ FWGATVITN LS IPY G +VN I GGF+V + TLTRFYT
Sbjct: 5 GQMGFWGATVITNFLSVIPYYGGDIVNWIWGGFSVGSPTLTRFYTFHFLFPFLIIVFSLV 64
Query: 512 XXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDN 691
+TGS+NPL L+ + K+ F P+ KD P + GDP+N
Sbjct: 65 HLVFLHRTGSSNPLKLSSSSLKMSFWPYSGVKDMLGFLLVFLLFFFVVLFLPTVFGDPEN 124
Query: 692 F 694
F
Sbjct: 125 F 125
>UniRef50_Q9B8V1 Cluster: Cytochrome b; n=66; Platyhelminthes|Rep:
Cytochrome b - Schistosoma mekongi
Length = 372
Score = 87.8 bits (208), Expect = 2e-16
Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 2/198 (1%)
Frame = +2
Query: 23 IGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFI 202
+G +++ +IIQ+ +G+ L+++Y + + + N+ Y IIR +H S F
Sbjct: 24 VGFMISAFMIIQVFSGIVLSLFYDVLGNFSMLMM-WTDDNI-YCWIIRYIHIWCVSIIFF 81
Query: 203 CIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSA 382
+Y+HIGR +YY S+ + V Y+LP Q+S+W ATV+T+++ +
Sbjct: 82 LVYVHIGRSLYYSSYRMIGVWNVGFFIYVILMVEAFLGYILPWHQMSYWAATVLTSIILS 141
Query: 383 IPYLGTILVN*I*GGFAVDNA-TLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGL 559
+P +G ++ + + GGF+V TL R + Q+GS +PL
Sbjct: 142 VPVVGGLIFSYVVGGFSVTLIDTLVRVFPVHISLGFILLGLIVLHLFYLHQSGSTSPLFF 201
Query: 560 -NRNLDKIPFHPFFTFKD 610
N D + FH + T KD
Sbjct: 202 YNGYSDCVYFHSYHTIKD 219
>UniRef50_Q74CM4 Cluster: Cytochrome b/b6; n=4; Geobacter|Rep:
Cytochrome b/b6 - Geobacter sulfurreducens
Length = 367
Score = 83.4 bits (197), Expect = 5e-15
Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 2/156 (1%)
Frame = +2
Query: 2 NISS**NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN 181
NI++ ++GS+L + IQ++TG+ L IYY + + AF V I +V +G +IR HA
Sbjct: 33 NINAWYSLGSVLLVIFGIQVVTGILLLIYYVPDADKAFRSVTAIMNDVPFGWLIRMCHAV 92
Query: 182 GASFFFICIYLHIGRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGA 355
G++ + LH+ ++ S+ + L Y+LP Q+SFW
Sbjct: 93 GSNMMVAVLLLHMLSVLFMGSYKRPRELNWLTGFILFNLVLGISLTGYLLPWSQLSFWAT 152
Query: 356 TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 463
TV TN AIP +G LV + GG V TL RF+
Sbjct: 153 TVATNSAGAIPVIGGYLVEFLRGGKLVGPPTLGRFF 188
>UniRef50_P56773 Cluster: Cytochrome b6; n=298; cellular
organisms|Rep: Cytochrome b6 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 215
Score = 83.0 bits (196), Expect = 6e-15
Identities = 45/150 (30%), Positives = 71/150 (47%), Gaps = 2/150 (1%)
Frame = +2
Query: 23 IGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFI 202
+G + C ++Q+ TG +T YY + AF V YI N+G +IR++H AS +
Sbjct: 36 LGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVL 95
Query: 203 CIYLHIGRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLL 376
+ LH+ R F + + Y LP QI +W ++T +
Sbjct: 96 MMILHVFRVYLTGGFKKPRELTWVTGVVLGVLTASFGVTGYSLPWDQIGYWAVKIVTGVP 155
Query: 377 SAIPYLGTILVN*I*GGFAVDNATLTRFYT 466
AIP +G+ LV + G +V +TLTRFY+
Sbjct: 156 DAIPVIGSPLVELLRGSASVGQSTLTRFYS 185
>UniRef50_Q34992 Cluster: Cytochrome b; n=1; Meloidogyne hapla|Rep:
Cytochrome b - Meloidogyne hapla (Root-knot nematode
worm)
Length = 132
Score = 76.2 bits (179), Expect = 7e-13
Identities = 33/81 (40%), Positives = 53/81 (65%)
Frame = +2
Query: 20 NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF 199
N GS+L IIQ+I+GL L++YY++ +F + Y+ VN G +IR +H N SFFF
Sbjct: 28 NYGSMLGFIFIIQVISGLMLSLYYSSESNFSFNSIQYLMIEVNKGWLIRLIHFNLVSFFF 87
Query: 200 ICIYLHIGRGIYYESFNLKYV 262
+ ++LHI + +++ S+ LK V
Sbjct: 88 MMLFLHILKALFFFSYRLKMV 108
>UniRef50_Q9ZGG0 Cluster: Cytochrome b6; n=3; Heliobacteriaceae|Rep:
Cytochrome b6 - Heliobacillus mobilis
Length = 213
Score = 75.8 bits (178), Expect = 1e-12
Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 2/149 (1%)
Frame = +2
Query: 23 IGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFI 202
+G L L ++Q +TGLFL +YY E AF V I V +G IR+LH A+ +
Sbjct: 34 LGGLTLLAFLVQCVTGLFLALYYKPTPEAAFASVQMITNEVRFGATIRSLHHWAANLMIL 93
Query: 203 CIYLHIGRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLL 376
++LH+ R Y SF + L Y+LP Q+S+W + +
Sbjct: 94 LVFLHMLRVYYTGSFKKPRELNWLAGCFLLVLSLGLAFTGYLLPYEQLSYWASVIGAETA 153
Query: 377 SAIPYLGTILVN*I*GGFAVDNATLTRFY 463
++P +G + + GG V L+RFY
Sbjct: 154 GSLPVVGATMKIMMQGGIKVTAEMLSRFY 182
>UniRef50_Q06824 Cluster: , mobile intron of apocytochrome b gene;
n=2; Chlamydomonas|Rep: , mobile intron of apocytochrome
b gene - Chlamydomonas smithii
Length = 374
Score = 75.4 bits (177), Expect = 1e-12
Identities = 34/75 (45%), Positives = 50/75 (66%)
Frame = +2
Query: 20 NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF 199
N GSL + L Q++TG+ L ++Y +++ AF V ++ +V G I+R HANGAS FF
Sbjct: 31 NGGSLAGMMLASQMLTGILLAMHYVGHVDYAFASVQHLMTDVPSGMILRYAHANGASLFF 90
Query: 200 ICIYLHIGRGIYYES 244
I +YLH+ RG+YY S
Sbjct: 91 IVVYLHVLRGMYYGS 105
>UniRef50_Q4KTX4 Cluster: Cytochrome b; n=3; Lanius meridionalis
koenigi|Rep: Cytochrome b - Lanius meridionalis koenigi
Length = 108
Score = 70.1 bits (164), Expect = 5e-11
Identities = 34/61 (55%), Positives = 37/61 (60%)
Frame = +2
Query: 170 LHANGASFFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFW 349
LHANGASFFFICIYLHIGRG+YY S+ K YVLP GQ+SFW
Sbjct: 48 LHANGASFFFICIYLHIGRGLYYGSYMNKETWNVGIILLLMLMATAFVGYVLPWGQMSFW 107
Query: 350 G 352
G
Sbjct: 108 G 108
>UniRef50_Q6JCT1 Cluster: Cytochrome b; n=6; Neoptera|Rep:
Cytochrome b - Aleyrodes elevatus
Length = 232
Score = 69.3 bits (162), Expect = 8e-11
Identities = 41/113 (36%), Positives = 53/113 (46%)
Frame = +2
Query: 356 TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQT 535
TVITNLLS+IP G ++V I GG++V N TL RF++
Sbjct: 1 TVITNLLSSIPIWGEMIVYWIWGGYSVGNPTLIRFFSFHFFFPFLMIFTIFLHLIFLHGH 60
Query: 536 GSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNF 694
GS NPLGL + DKI F+P+F KD P +L D +NF
Sbjct: 61 GSGNPLGLGGSYDKIYFYPYFMLKDFIGFFFFYIYLFICGFFFPLILVDSENF 113
>UniRef50_Q35015 Cluster: Cytochrome b; n=1; Meloidogyne
javanica|Rep: Cytochrome b - Meloidogyne javanica
(Root-knot nematode worm)
Length = 113
Score = 69.3 bits (162), Expect = 8e-11
Identities = 30/81 (37%), Positives = 50/81 (61%)
Frame = +2
Query: 20 NIGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF 199
N GS L + +Q+I+GL L+++Y ++ +F + Y+ VN G +IR +H N S FF
Sbjct: 28 NFGSFLGIIFFMQVISGLLLSLFYESSSNFSFDSIQYLMIEVNNGWLIRLIHFNMVSLFF 87
Query: 200 ICIYLHIGRGIYYESFNLKYV 262
+ + LH+ + ++Y SF LK V
Sbjct: 88 MLVMLHMLKALFYFSFRLKKV 108
>UniRef50_O66459 Cluster: Cytochrome b; n=2; Aquifex aeolicus|Rep:
Cytochrome b - Aquifex aeolicus
Length = 409
Score = 65.3 bits (152), Expect = 1e-09
Identities = 60/214 (28%), Positives = 91/214 (42%), Gaps = 19/214 (8%)
Frame = +2
Query: 26 GSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHAN-GASFFFI 202
G L + IQII+G+ L +YY + V+ + N + H GA+FF
Sbjct: 41 GILALVTFAIQIISGMVLILYYNLQSQ-TLLTVHLLDNGRNSLRMALQAHTRTGANFFMA 99
Query: 203 CIYLHIGRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL- 373
+YLH+ GIYY ++ + V + Y+LP GQ+S+WG V T +
Sbjct: 100 IVYLHMFTGIYYNAYKRPRELVWIVGWLIYFVLILTALSGYLLPWGQLSYWGFIVTTEIP 159
Query: 374 --LSAIPYLGTI-------LVN*I*GGFAVDNATLTR-FYTXXXXXXXXXXXXXXXXXXX 523
L+ P L I +V + GG+ V + TL R F +
Sbjct: 160 GSLADAPILKPIFKAIAETIVLWMKGGYVVTDVTLGRVFGSHVLIYPLILLALVGIHLYL 219
Query: 524 XXQTGSNNPLGL----NRNLDK-IPFHPFFTFKD 610
G +NP G+ +N DK +PFHP+ T K+
Sbjct: 220 VRAAGISNPEGIEYDKKKNPDKFVPFHPYMTLKE 253
>UniRef50_A3QRH7 Cluster: Cytochrome b; n=1; Microcotyle
sebastis|Rep: Cytochrome b - Microcotyle sebastis
Length = 386
Score = 65.3 bits (152), Expect = 1e-09
Identities = 55/231 (23%), Positives = 91/231 (39%), Gaps = 8/231 (3%)
Frame = +2
Query: 26 GSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVN------YG*IIRTLHANGA 187
GSLL + +Q++TG+F I Y + + VN ++R +H GA
Sbjct: 40 GSLLLGVMALQLVTGIFCAIEYLNLTKKHLFHVNVGVGEPGPIMDGLVSDLLRFMHLWGA 99
Query: 188 SFFFICIYLHIGRGIYYESFNLKYV-*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVI 364
S FIC+ HIGRG+YY S++ V Y+LP Q+S+W VI
Sbjct: 100 SLVFICLLGHIGRGLYYCSYSKNPVLWSFGMILYVVILIEAFLGYLLPWHQMSYWAGVVI 159
Query: 365 TNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSN 544
+ + ++P +G L + + G + + +R + + GS+
Sbjct: 160 STIFLSLPVIGPHLYSFLLGSYDFGDGIXSRVFCVHVCFGFVIIALIVLHLVNLHKIGSS 219
Query: 545 NPLGLNRNL-DKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNF 694
N + D I FH + +KD +P+ +NF
Sbjct: 220 NSFNSGDSYSDVIFFHXGYGYKDVLLFLSVXLVTLLFSCYSPWFTSLKENF 270
>UniRef50_Q18UP1 Cluster: Cytochrome b/b6-like; n=2;
Desulfitobacterium hafniense|Rep: Cytochrome b/b6-like -
Desulfitobacterium hafniense (strain DCB-2)
Length = 215
Score = 64.9 bits (151), Expect = 2e-09
Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 2/148 (1%)
Frame = +2
Query: 26 GSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFIC 205
G + L ++Q++TG+ L +YY +E A+ V +I V G +R++H A+ I
Sbjct: 37 GGISFLLFLVQVVTGIVLAVYYNPTMEGAYQSVMFINDEVFMGKALRSVHNIAANLMLIM 96
Query: 206 IYLHIGRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLS 379
+ LH R ++ ++ ++ + Y+LP Q+ +W A + T +L
Sbjct: 97 VVLHFLRVVFTGAYKPPRQFNWVVGVLLLLLVILFCFTGYLLPLDQVGYWAAIIGTKILG 156
Query: 380 AIPYLGTILVN*I*GGFAVDNATLTRFY 463
+IP +G L+ G + + TL RF+
Sbjct: 157 SIPIVGDQLLLLGQAGTKITDHTLMRFF 184
>UniRef50_Q0LKT7 Cluster: Cytochrome b/b6-like; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Cytochrome b/b6-like -
Herpetosiphon aurantiacus ATCC 23779
Length = 562
Score = 64.9 bits (151), Expect = 2e-09
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 2/149 (1%)
Frame = +2
Query: 23 IGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFI 202
+G + +++ ITGL L IYY+ + A+ + I +V G ++R +H GA F
Sbjct: 77 LGWMSFFFFVLEAITGLVLMIYYSPSPNEAYATMTQIMNDVPLGGLMRNVHRLGAHFMVA 136
Query: 203 CIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLL 376
+ LH+ R + S+ +++ Y+LP Q++FW T+ +++
Sbjct: 137 VVILHMLRTYFTASYKAPRQFIWFTGMILLFMTLLLSFSGYLLPWDQLAFWAVTIGSSMA 196
Query: 377 SAIPYLGTILVN*I*GGFAVDNATLTRFY 463
A P +G + + GG + L RFY
Sbjct: 197 DAAPGVGPAIGRLLRGGAEIGAGALLRFY 225
>UniRef50_A3ER63 Cluster: Cytochrome b subunit of the bc complex;
n=1; Leptospirillum sp. Group II UBA|Rep: Cytochrome b
subunit of the bc complex - Leptospirillum sp. Group II
UBA
Length = 458
Score = 64.1 bits (149), Expect = 3e-09
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 6/152 (3%)
Frame = +2
Query: 26 GSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICR----NVNYG*IIRTLHANGASF 193
GS++ LI+Q +TG+ L YY + A+ VNYI ++ G +IR H GAS
Sbjct: 43 GSMVLFTLILQFVTGVMLAFYYGGTPDHAWDSVNYIDHLHYGTLDVGRLIRGFHYWGASI 102
Query: 194 FFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVIT 367
+ + H+ + + ++ + + L Y+LP + ++WG V T
Sbjct: 103 MVVLVGAHLLQVFLWGAYKRPREIMWLVGVILLALTMTAAFTGYLLPWDERAYWGTIVGT 162
Query: 368 NLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 463
N++ +P +G +L + I GG + TL+ F+
Sbjct: 163 NMIGLVPVVGPLLKSAIRGGSGLGALTLSHFF 194
>UniRef50_Q67JM0 Cluster: Menaquinol-cytochrome C reductase; n=1;
Symbiobacterium thermophilum|Rep: Menaquinol-cytochrome
C reductase - Symbiobacterium thermophilum
Length = 258
Score = 63.7 bits (148), Expect = 4e-09
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 2/150 (1%)
Frame = +2
Query: 23 IGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFI 202
+G L L ++ +TG++L YY ++ A+ + + +V +G R LH A I
Sbjct: 58 LGGLSLLMFLMLTVTGVWLMFYYVPSVPGAYESMKALETDVIFGPFARNLHRWAAHGMVI 117
Query: 203 CIYLHIGRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLL 376
++LH+ R Y S+ ++ + Y+LP Q+++W V +N+
Sbjct: 118 AVWLHMTRVFYTGSYKPPREFNWVIGVALFLITVLLSFTGYLLPWDQLAYWAIQVGSNMA 177
Query: 377 SAIPYLGTILVN*I*GGFAVDNATLTRFYT 466
P +GT + + G+ + ATL R+YT
Sbjct: 178 KVTPVIGTYVQRALLDGYDIGPATLVRWYT 207
>UniRef50_A3ZQU1 Cluster: Menaquinol-cytochrome-c reductase
cytochrome b subunit; n=1; Blastopirellula marina DSM
3645|Rep: Menaquinol-cytochrome-c reductase cytochrome b
subunit - Blastopirellula marina DSM 3645
Length = 639
Score = 63.7 bits (148), Expect = 4e-09
Identities = 44/148 (29%), Positives = 68/148 (45%), Gaps = 2/148 (1%)
Frame = +2
Query: 26 GSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFIC 205
GS L ++Q+ITG FL + Y+AN + A+ V YI + G I+R LH A +
Sbjct: 37 GSTLVFAFVVQMITGTFLWMAYSANSKGAWESVYYIQYEMQGGWILRGLHHFMAQAMIVL 96
Query: 206 IYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLS 379
+ LH + + ++ ++ Y+LP Q +W V T L+
Sbjct: 97 LALHFLQVVIDGAYKAPREFNFWTGLILMKIVLGLSLTGYLLPWDQKGYWATKVATTLMG 156
Query: 380 AIPYLGTILVN*I*GGFAVDNATLTRFY 463
IP +G L + GG +ATLTRF+
Sbjct: 157 LIPAIGGDLQKVVVGGTDYGHATLTRFF 184
>UniRef50_Q952Z5 Cluster: Cytochrome b; n=1; Partula turgida|Rep:
Cytochrome b - Partula turgida
Length = 211
Score = 62.1 bits (144), Expect = 1e-08
Identities = 32/90 (35%), Positives = 41/90 (45%)
Frame = +2
Query: 422 GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGLNRNLDKIPFHPFFT 601
GGF+V ATL RF++ + GS NPLG N +++KI FHP+FT
Sbjct: 6 GGFSVGQATLNRFFSLHFILPFIILVLVIVHLMFLHEKGSTNPLGHNMHINKILFHPYFT 65
Query: 602 FKDXXXXXXXXXXXXXXXXXNPYLLGDPDN 691
KD PYLL DP+N
Sbjct: 66 LKDVVGFLLVLFCLIMMCAYFPYLLSDPEN 95
>UniRef50_Q1ARW1 Cluster: Cytochrome b/b6-like protein; n=2;
Rubrobacter xylanophilus DSM 9941|Rep: Cytochrome
b/b6-like protein - Rubrobacter xylanophilus (strain DSM
9941 / NBRC 16129)
Length = 257
Score = 61.3 bits (142), Expect = 2e-08
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 2/149 (1%)
Frame = +2
Query: 23 IGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFI 202
+GS + +Q +TG+ L YY + A+ V YI +G +IR +H A+F
Sbjct: 48 LGSATLFLITLQFLTGILLLFYYVPTTDHAWNSVYYIMNEAYFGKLIRGIHYWSANFLMA 107
Query: 203 CIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLL 376
I +H+ R + ++ + + Y+L Q FW + V +
Sbjct: 108 VIGMHMARTFFSGAYKAPREMNWIVGVILLLLVIGLAFTGYLLRWDQDGFWASVVGIKIG 167
Query: 377 SAIPYLGTILVN*I*GGFAVDNATLTRFY 463
S P+LG + + + GG V ATL+RF+
Sbjct: 168 SYSPFLGPYITHFLLGGDVVGPATLSRFF 196
>UniRef50_A7H6W4 Cluster: Cytochrome b/b6 domain; n=2;
Anaeromyxobacter|Rep: Cytochrome b/b6 domain -
Anaeromyxobacter sp. Fw109-5
Length = 448
Score = 61.3 bits (142), Expect = 2e-08
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Frame = +2
Query: 23 IGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFI 202
+G++ A L++ +++GL L + ++E A+ V I V +G IR++H A
Sbjct: 63 LGTVSAALLLLLVVSGLPLLFLHVPSVERAYGSVKDIEYVVTFGSWIRSVHRIAAHLMVA 122
Query: 203 CIYLHIGR----GIYYESF----NLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGAT 358
++LH+ R G Y + ++ + Y+LP Q+++W T
Sbjct: 123 AVFLHLVRVFLTGAYKNGTGRGQHREWNWVLGVVMFLVTLFLSFTGYLLPWDQLAYWAVT 182
Query: 359 VITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 463
V TN+ SA+P +G + + GG +D TL RFY
Sbjct: 183 VGTNIASAVPLVGAEVRELLLGGRNIDQPTLIRFY 217
>UniRef50_Q1HTY1 Cluster: Cytochrome oxidase B; n=2; Pyuridae|Rep:
Cytochrome oxidase B - Pyura haustor
Length = 137
Score = 61.3 bits (142), Expect = 2e-08
Identities = 42/122 (34%), Positives = 52/122 (42%), Gaps = 5/122 (4%)
Frame = +2
Query: 344 FWGA-----TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXX 508
FWG +VI NLL+ IP++G VN GGF V ATLTRFYT
Sbjct: 2 FWGQGGFEESVIPNLLNPIPFIGGDTVNWAWGGFFVGGATLTRFYTFHFLFPFILVVLSM 61
Query: 509 XXXXXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPD 688
+ GS+NPL N K+ F P+ KD P LL DP+
Sbjct: 62 LHLVFLHEGGSSNPLKGTNNSFKVWFWPYNGVKDMFGLLFILIGLVFVVFFFPNLLTDPE 121
Query: 689 NF 694
N+
Sbjct: 122 NY 123
>UniRef50_Q9BGI6 Cluster: Cytochrome b; n=1; Elephas maximus|Rep:
Cytochrome b - Elephas maximus (Indian elephant)
Length = 102
Score = 60.9 bits (141), Expect = 3e-08
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +2
Query: 26 GSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRT 169
GSLL CL+ QI+TGLFL I Y + AF +++ICR+VNYG IIRT
Sbjct: 2 GSLLGACLVAQILTGLFLAIRYAPDTITAFSSISHICRDVNYGWIIRT 49
>UniRef50_P46912 Cluster: Menaquinol-cytochrome c reductase
cytochrome b subunit; n=24; Bacillaceae|Rep:
Menaquinol-cytochrome c reductase cytochrome b subunit -
Bacillus subtilis
Length = 224
Score = 59.7 bits (138), Expect = 7e-08
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Frame = +2
Query: 26 GSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFIC 205
G L +IQ+++G+FLT+YY +I+ A+ V Y+ V +G I+R +H GAS +
Sbjct: 45 GGLTFFVTVIQVLSGMFLTMYYVPDIKNAWESVYYLQNEVAFGQIVRGMHHWGASLVIVM 104
Query: 206 IYLHIGR----GIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNL 373
++LH R G Y + L ++ Y+LP + + V +
Sbjct: 105 MFLHTLRVFFQGAYKKPRELNWI--VGVLIFFVMLGLGFTGYLLPWDMKALFATKVGLQI 162
Query: 374 LSAIPYLGTILVN*I*GGFAVDNA-TLTRFY 463
A P +GT + + G + A TLTRF+
Sbjct: 163 AEATPLIGTQVKTLLAGHPDIVGAQTLTRFF 193
>UniRef50_Q01PC6 Cluster: Cytochrome b/b6, N-terminal domain; n=1;
Solibacter usitatus Ellin6076|Rep: Cytochrome b/b6,
N-terminal domain - Solibacter usitatus (strain
Ellin6076)
Length = 499
Score = 57.2 bits (132), Expect = 4e-07
Identities = 33/148 (22%), Positives = 69/148 (46%), Gaps = 2/148 (1%)
Frame = +2
Query: 26 GSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFIC 205
GS ++Q++TG+ L + Y + A+ + + +++ G IR LH G++F
Sbjct: 41 GSAALTVFLLQMVTGILLALIYVPSAGEAWNSLQTLNHSISMGWFIRALHGWGSNFMIAV 100
Query: 206 IYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLS 379
+ +H+ + + ++ + + V+ Q ++WG + +++S
Sbjct: 101 VLVHMAQVFLFGAYKYPRELTWILGVFLLLVTLAMGFTGQVMRFDQDAYWGLGIGASIVS 160
Query: 380 AIPYLGTILVN*I*GGFAVDNATLTRFY 463
+P LG LV + GG + ATL+RF+
Sbjct: 161 RVPLLGPWLVTLVLGGPIIAGATLSRFF 188
>UniRef50_A6CCS1 Cluster: Cytochrome b6; n=1; Planctomyces maris DSM
8797|Rep: Cytochrome b6 - Planctomyces maris DSM 8797
Length = 665
Score = 56.8 bits (131), Expect = 5e-07
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 2/149 (1%)
Frame = +2
Query: 26 GSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFIC 205
G L L ++++++TG L Y+ + A+ V+YI V+ G +R LH A +
Sbjct: 41 GGALVLMMLVEMVTGALLMTVYSPSEASAWGSVHYIETQVDLGWFVRGLHHYTAHMMIVA 100
Query: 206 IYLHIGRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLS 379
I +HI I + +++ LP Q +W + T +
Sbjct: 101 IVVHIFLVIISAGYRKPKEFIYWTSLLIGGVIIGLTITGNPLPWDQKGYWSYQIETGIAG 160
Query: 380 AIPYLGTILVN*I*GGFAVDNATLTRFYT 466
+P +G+ L + + GG N TLTR YT
Sbjct: 161 TMPVIGSTLRSLVVGGSEFGNLTLTRLYT 189
>UniRef50_Q9GM37 Cluster: Putative uncharacterized protein; n=1;
Macaca fascicularis|Rep: Putative uncharacterized
protein - Macaca fascicularis (Crab eating macaque)
(Cynomolgus monkey)
Length = 115
Score = 56.8 bits (131), Expect = 5e-07
Identities = 37/111 (33%), Positives = 56/111 (50%)
Frame = +1
Query: 67 WIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFIFFYLHLFTYRTRNLL*IF 246
W +N L + + L + Y P+ KL L+ S WS +L T+R+R LL +
Sbjct: 5 WPTISNTLLTGHLLRLLLNCTYHPRRKLRLDYSLSPRQWSLYALHLPFPTHRSRPLLWLI 64
Query: 247 *LKICMINWNYNFIYTNSNCFHRLCLTLRSNIFLGGNRNYKSIICNPLFRN 399
+ + +Y Y ++N FH L +R NI LG N N+K I NP++RN
Sbjct: 65 SPSRNLKHRHYTPSYNHNNSFHGLRSPMRPNIILGSNSNHKPTISNPVYRN 115
>UniRef50_Q1EN74 Cluster: Cytochrome b; n=2; Heligmosomoides
polygyrus|Rep: Cytochrome b - Heligmosomoides polygyrus
Length = 211
Score = 56.4 bits (130), Expect = 6e-07
Identities = 26/49 (53%), Positives = 32/49 (65%)
Frame = +2
Query: 110 AFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRGIYYESFNLK 256
AF V YI VNYG I R H NGAS FF+ +YLHI +G++ S+ LK
Sbjct: 2 AFNVVXYIMYEVNYGWIFRIFHFNGASLFFVFLYLHIFKGLFMMSYRLK 50
>UniRef50_Q01T86 Cluster: Cytochrome b/b6, N-terminal domain; n=1;
Solibacter usitatus Ellin6076|Rep: Cytochrome b/b6,
N-terminal domain - Solibacter usitatus (strain
Ellin6076)
Length = 545
Score = 56.0 bits (129), Expect = 8e-07
Identities = 44/197 (22%), Positives = 73/197 (37%), Gaps = 2/197 (1%)
Frame = +2
Query: 26 GSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFIC 205
GS+ ++Q TG+ L Y A+ + YI + G ++R LH GAS +
Sbjct: 41 GSVAMFLFMVQAFTGILLAFNYAPTPGEAYNSLRYILTELTAGRLMRGLHHWGASMIIVV 100
Query: 206 IYLHIGRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLS 379
+ LH+ + Y ++ + + Y+LP ++WG V T + +
Sbjct: 101 VVLHMVQVFLYGAYKKPREATWMVGVVLFLVTLAYGLTGYLLPWDNRAYWGTVVATKIAA 160
Query: 380 AIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQTGSNNPLGL 559
P +G L + G +V T RFY + P+
Sbjct: 161 QAPVVGPYLSRLLGGEGSVGVVTFARFYGLHVLLLPPATIFLVILHVFLVRKHGVAPVPG 220
Query: 560 NRNLDKIPFHPFFTFKD 610
+ L K F+P FKD
Sbjct: 221 DELLPKKQFYPAQVFKD 237
>UniRef50_Q01YB7 Cluster: Cytochrome b/b6, N-terminal domain; n=6;
Bacteria|Rep: Cytochrome b/b6, N-terminal domain -
Solibacter usitatus (strain Ellin6076)
Length = 281
Score = 55.6 bits (128), Expect = 1e-06
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
Frame = +2
Query: 23 IGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFI 202
+G + I + TG L YY + +AF + Y+ +V +G ++R +H GA I
Sbjct: 73 MGGMTFYVYITLVFTGTLLMFYYHPSKVVAFRDILYLESDVPFGKLLRNMHRWGAHLMVI 132
Query: 203 CIYLHIGRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLL 376
+ LH+ R S+ ++ + Y+LP Q+ FW TV TN+
Sbjct: 133 MVELHMFRVFLTGSYKKPREFNWVVGVLLLVLTLLLSFTGYLLPDDQLGFWAVTVGTNMA 192
Query: 377 SAIPYLG 397
A P LG
Sbjct: 193 RATPLLG 199
>UniRef50_Q9MYR6 Cluster: Cytochrome b; n=4; Cetartiodactyla|Rep:
Cytochrome b - Ovis aries (Sheep)
Length = 113
Score = 55.6 bits (128), Expect = 1e-06
Identities = 39/112 (34%), Positives = 57/112 (50%)
Frame = +1
Query: 13 LMKYRIPTSFMSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFI 192
+MK + + N ++ I +N L++ + NS L +LP+ KLWLN T
Sbjct: 1 MMKLWLSPRHLLNFTDSNRPIPSNTLYTXHNNSILLCNPHLPRRKLWLNYPIYTRKRGIN 60
Query: 193 FFYLHLFTYRTRNLL*IF*LKICMINWNYNFIYTNSNCFHRLCLTLRSNIFL 348
FYL ++ RTR +L I L M + + I NS+ HRLC T+R NI L
Sbjct: 61 IFYLPIYACRTRPILWIIYLPRNMKHRSNPPICDNSHSIHRLCFTMRPNIXL 112
>UniRef50_Q9F721 Cluster: Cytochrome bc complex cytochrome b
subunit; n=11; Chlorobiaceae|Rep: Cytochrome bc complex
cytochrome b subunit - Chlorobium tepidum
Length = 428
Score = 55.6 bits (128), Expect = 1e-06
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 2/149 (1%)
Frame = +2
Query: 26 GSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFIC 205
G L IIQI+TGL L YY AF +I V +G +IR +HA A+ +
Sbjct: 110 GGLGLFFFIIQILTGLLLLQYYKPTETDAFSSFLFIQGQVPFGWLIRQIHAWSANLMILM 169
Query: 206 IYLHIGRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLS 379
+++H+ + +S+ + + + Y+LP +++F+ V T +
Sbjct: 170 LFIHMFSTFFMKSYRKPRELLWVSGFILLVLTLGFGFTGYLLPWNELAFFATQVGTEVPK 229
Query: 380 AIPYLGTILVN*I*GGFAVDNATLTRFYT 466
P G LV + GG V TLTR ++
Sbjct: 230 VAPG-GAFLVEILRGGPDVSGETLTRMFS 257
>UniRef50_A0LFE3 Cluster: Cytochrome b/b6, N-terminal domain; n=1;
Syntrophobacter fumaroxidans MPOB|Rep: Cytochrome b/b6,
N-terminal domain - Syntrophobacter fumaroxidans (strain
DSM 10017 / MPOB)
Length = 358
Score = 54.8 bits (126), Expect = 2e-06
Identities = 35/148 (23%), Positives = 68/148 (45%), Gaps = 2/148 (1%)
Frame = +2
Query: 26 GSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFIC 205
GSL + +++ ++G FL YY+ A+ V++ +V +G I+R +H + +
Sbjct: 41 GSLSLVLVVMLFLSGAFLMFYYSPTPGAAYDSVDFAQFSVPFGDIVRGVHYYAWNLLLVV 100
Query: 206 IYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLS 379
+ LH+ ++ ++V + +LP Q +W V +++S
Sbjct: 101 LGLHLAGTFLTAAYQAPRQFVWISGVLIMLVVPLFIITGDLLPWDQKGYWTTQVRNSIIS 160
Query: 380 AIPYLGTILVN*I*GGFAVDNATLTRFY 463
+IP +G + + + GG TLTRFY
Sbjct: 161 SIPVVGDLTLRLLQGGPRTGIVTLTRFY 188
>UniRef50_A4A2J7 Cluster: Apocytochrome b6; n=1; Blastopirellula
marina DSM 3645|Rep: Apocytochrome b6 - Blastopirellula
marina DSM 3645
Length = 494
Score = 54.0 bits (124), Expect = 3e-06
Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 2/149 (1%)
Frame = +2
Query: 26 GSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFIC 205
GS+ L++QI+TG+ L + Y A+ + Y+ +G ++R +H A+ +
Sbjct: 44 GSMTLTLLMLQIVTGVCLAMIYQPTAADAYASLEYLNYEAPFGWLLRAIHYWSATGMVVM 103
Query: 206 IYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLS 379
+ +H+ + +F + + VL S+WG +V +
Sbjct: 104 LMVHMTQVFLMGAFKYPRELTWIVGVGLLTTTLVLAFTGQVLRYDGDSYWGVSVAVSAAG 163
Query: 380 AIPYLGTILVN*I*GGFAVDNATLTRFYT 466
+P+ G +V+ I GG + + TL+RF+T
Sbjct: 164 RVPFAGPSIVHLILGGEYIGSETLSRFFT 192
>UniRef50_Q8W9D9 Cluster: Cytochrome-b protein; n=9;
Sabanejewia|Rep: Cytochrome-b protein - Sabanejewia
balcanica
Length = 81
Score = 52.8 bits (121), Expect = 8e-06
Identities = 29/67 (43%), Positives = 41/67 (61%)
Frame = -2
Query: 204 QIKKNEAPLACNVRIIQP*FTFRQI*FTL*KAISIFAV*YIVKNNPVXXXXIRHKASRDP 25
Q+KKN+APL +R+ P FT RQ+ T KA+ + V + KN+PV I+HK S +P
Sbjct: 1 QMKKNDAPLPWMLRMSHPYFTSRQMWATEEKAVVMSDVYCMAKNSPVWIWVIKHKPSNEP 60
Query: 24 IFHQEEI 4
FH E+
Sbjct: 61 KFHHTEM 67
>UniRef50_A6GGF8 Cluster: Cytochrome b/b6-like protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Cytochrome b/b6-like
protein - Plesiocystis pacifica SIR-1
Length = 587
Score = 52.8 bits (121), Expect = 8e-06
Identities = 37/148 (25%), Positives = 64/148 (43%), Gaps = 2/148 (1%)
Frame = +2
Query: 26 GSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFIC 205
GS+L + Q++ G+ L YY+ + A+ YI V G +R LH +G+S +
Sbjct: 37 GSVLTYLFLQQVVLGILLATYYSPSATDAWASTAYIQDQVAGGWFLRGLHHHGSSAMVVV 96
Query: 206 IYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLS 379
LH+ + + ++ + Y+LP Q +W V T ++
Sbjct: 97 TLLHLMQVVLAGAYRAPREVNWWTGLAMGGLVLAFALTGYLLPWDQKGYWATQVATGIMG 156
Query: 380 AIPYLGTILVN*I*GGFAVDNATLTRFY 463
+P G + + + GG N T+TRFY
Sbjct: 157 TVPG-GEPMQHALQGGDQYGNLTITRFY 183
>UniRef50_Q9HRR2 Cluster: Cytochrome b6; n=4; Halobacteriaceae|Rep:
Cytochrome b6 - Halobacterium salinarium (Halobacterium
halobium)
Length = 270
Score = 52.0 bits (119), Expect = 1e-05
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Frame = +2
Query: 20 NIGSLLALCLIIQIITGLFLTIYY-------TANIE---IAFYRVNYICRNVNYG*IIRT 169
++G L ++ I+G L YY T ++ +A+ V I ++N+G +R+
Sbjct: 80 SLGFFSTLSYVVAAISGALLGFYYSPSAAAATCGVDGSTVAYCAVAGIMTDLNFGFFLRS 139
Query: 170 LHANGASFFFICIYLHIGR----GIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQ 337
LH A ++LH+ R G Y E + + L Y+LP Q
Sbjct: 140 LHRWAAQVMTAAVFLHMLRVYFTGSYKEPREVNW--LIGIVLLSLTMVFGYTGYLLPWDQ 197
Query: 338 ISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 463
+++W + + +IP +G + + GGF++ ATL R Y
Sbjct: 198 LAYWAGQIGVEMSLSIPLVGDWVAQLMFGGFSLGQATLQRMY 239
>UniRef50_Q021B1 Cluster: Cytochrome b/b6, N-terminal domain; n=4;
Bacteria|Rep: Cytochrome b/b6, N-terminal domain -
Solibacter usitatus (strain Ellin6076)
Length = 438
Score = 50.8 bits (116), Expect = 3e-05
Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 2/149 (1%)
Frame = +2
Query: 23 IGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFI 202
+G + +I + TG+ L YY + A+ R+ + V +G +R +H A
Sbjct: 72 LGLMSFFLFVILVATGILLMFYYVPSTTQAYDRMLDLRGTVAFGTFLRNMHRWSAHGMVA 131
Query: 203 CIYLHIGRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLL 376
++LH+ R + S+ ++ + Y+LP Q++FW TV T++
Sbjct: 132 IVFLHMCRVFFTGSYKKPREFNWVLGVVLFLLTLFLSFTGYLLPWDQLAFWAITVGTSIA 191
Query: 377 SAIPYLGTILVN*I*GGFAVDNATLTRFY 463
P +G + + G V L RFY
Sbjct: 192 GYAPVVGQDIKFLLLGDATVGQEALLRFY 220
>UniRef50_Q9DDQ5 Cluster: Cytochrome b; n=15; Decapterus
russelli|Rep: Cytochrome b - Decapterus russelli (Indian
scad)
Length = 102
Score = 50.0 bits (114), Expect = 5e-05
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +1
Query: 43 MSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFIFFYLHLFTYR 222
+ N N +W + + LH ++ N F +LP+CKL L +S TC W + +L+L +YR
Sbjct: 7 LPNYPNPHWTLPCHTLHLRHRNCFHIRCTHLPRCKLRLTHSQHTCQWRILLLHLYLSSYR 66
Query: 223 TRNLL 237
+R +L
Sbjct: 67 SRPIL 71
>UniRef50_Q8M833 Cluster: Cytochrome b; n=1; Microstomum
lineare|Rep: Cytochrome b - Microstomum lineare
Length = 234
Score = 48.8 bits (111), Expect = 1e-04
Identities = 34/113 (30%), Positives = 46/113 (40%)
Frame = +2
Query: 356 TVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXXXXXXQT 535
+V TN LS +PYLG L+ I GG V ++ RF++ +
Sbjct: 3 SVXTNFLSTLPYLGVFLLYSIWGGLNVCEISVYRFFSLHFIMPFVLVVLSIIHMAMLHVS 62
Query: 536 GSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNF 694
S+NPL +N N D + F P+F KD PYL D NF
Sbjct: 63 VSSNPLHIN-NKDFLSFFPYFWSKDIVGFFLMFIFVLWLLTFFPYLFCDAANF 114
>UniRef50_Q9GAU9 Cluster: Cytochrome b; n=2; Eulemur mongoz|Rep:
Cytochrome b - Eulemur mongoz (Mongoose lemur)
Length = 59
Score = 47.2 bits (107), Expect = 4e-04
Identities = 17/25 (68%), Positives = 22/25 (88%)
Frame = +2
Query: 179 NGASFFFICIYLHIGRGIYYESFNL 253
NGAS FF+C+++HIGRG+YY SF L
Sbjct: 21 NGASMFFLCLFIHIGRGLYYGSFTL 45
>UniRef50_Q33568 Cluster: Cytochrome b; n=33; Kinetoplastida|Rep:
Cytochrome b - Trypanoplasma borreli
Length = 372
Score = 47.2 bits (107), Expect = 4e-04
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 5/153 (3%)
Frame = +2
Query: 23 IGSLLALCLIIQIITGLFLT-IYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFF 199
+G L + + +QI+ G+ L+ ++ I + I + G IIR+LH S +
Sbjct: 32 LGFNLGVMIALQILVGICLSWFFFRCIIPQNWIFTLLIHLEFDLGFIIRSLHIIFTSLLY 91
Query: 200 ICIYLHIGRGIY----YESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVIT 367
+Y+HI + I+ ++S L + Y LP +S+WG TV +
Sbjct: 92 FLLYIHIIKVIFLCLIFDSSMLVW--FFGFLIFIFILIIAFIGYTLPCTSMSYWGLTVFS 149
Query: 368 NLLSAIPYLGTILVN*I*GGFAVDNATLTRFYT 466
N+L+ IP +G + I +++ TL + ++
Sbjct: 150 NILATIPLIGIYICQWIWCSEFINDFTLLKLHS 182
>UniRef50_Q4AEZ5 Cluster: Cytochrome b/b6, N-terminal; n=1;
Chlorobium phaeobacteroides BS1|Rep: Cytochrome b/b6,
N-terminal - Chlorobium phaeobacteroides BS1
Length = 333
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +2
Query: 317 YVLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 463
Y+LP Q+S+W T++TN+L +P +G L + GG V+ TL+ FY
Sbjct: 45 YLLPWDQLSYWAVTIMTNILEYLPLVGNNLAIIVRGGEYVNGNTLSIFY 93
>UniRef50_Q7M2D6 Cluster: Ubiquinol-cytochrome-c reductase (EC
1.10.2.2) cytochrome b; n=2; Leishmania amazonensis|Rep:
Ubiquinol-cytochrome-c reductase (EC 1.10.2.2)
cytochrome b - Leishmania amazonensis
Length = 250
Score = 44.4 bits (100), Expect = 0.003
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 5/143 (3%)
Frame = +2
Query: 50 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFICIYLHIGRG 229
++ ++ FL + + I I +Y + V++ +IR+ H S F +Y+HI
Sbjct: 17 VVCVVHDFFLVVLFV-QIGILYYFYEILI--VDF--VIRSTHICFTSLLFFLLYIHIFIK 71
Query: 230 -----IYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLLSAIPYL 394
I +++ L +V YVLP +S+WG TV +N+L+ +P +
Sbjct: 72 CIVLIILFDTHILVWV--VGFVIYIFIVIIGFIGYVLPCTMMSYWGLTVFSNILATVPVI 129
Query: 395 GTILVN*I*GGFAVDNATLTRFY 463
GT L I G +++ TL + +
Sbjct: 130 GTWLCYWIWGSEYINDFTLLKLH 152
>UniRef50_Q5BLW9 Cluster: Cytochrome b; n=1; Pseudourostyla
cristata|Rep: Cytochrome b - Pseudourostyla cristata
Length = 393
Score = 43.2 bits (97), Expect = 0.006
Identities = 19/75 (25%), Positives = 38/75 (50%)
Frame = +2
Query: 23 IGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFI 202
IG +L + +++Q+++G FL YY + + + +G + +H G F+
Sbjct: 36 IGFMLLIAIVLQVLSGFFLGWYYIPEPGLVVELREEMFNDTRFGAEVFYMHVRGVDTIFV 95
Query: 203 CIYLHIGRGIYYESF 247
YLHI + IY +++
Sbjct: 96 LSYLHILKKIYLKNY 110
>UniRef50_Q97UN3 Cluster: Quinol oxidase-2, cytochrome b; n=5;
Sulfolobaceae|Rep: Quinol oxidase-2, cytochrome b -
Sulfolobus solfataricus
Length = 549
Score = 43.2 bits (97), Expect = 0.006
Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 3/131 (2%)
Frame = +2
Query: 23 IGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFI 202
+G L+ I+++ITG + +YYT + + Y+ V YG + +LH+ GA
Sbjct: 81 LGGLVLSAFILEVITGALVALYYTPS--DPYTSTTYLISKVPYGAFLFSLHSWGAYAMVF 138
Query: 203 CIYLHIGRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLL 376
+ +H+ R + ++ + + + Y LP IS+ T NL
Sbjct: 139 LLLVHMTRNFFVGAYRQPREIMWIVGAGLAGLTLTEAYLGYSLPYNLISWVATTTGLNLF 198
Query: 377 SAIPY-LGTIL 406
S +P+ LG ++
Sbjct: 199 SYMPFNLGYLI 209
>UniRef50_P39480 Cluster: Cytochrome b; n=5; Sulfolobaceae|Rep:
Cytochrome b - Sulfolobus acidocaldarius
Length = 563
Score = 43.2 bits (97), Expect = 0.006
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = +2
Query: 23 IGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFI 202
+G+++A IITGLFL +YY A+ I +V YG ++ H G+ +
Sbjct: 39 LGAMVAASFAYTIITGLFLLLYYQP--AFAYQSTQTIINSVPYGSVLLFSHLYGSYIMIL 96
Query: 203 CIYLHIGRGIY 235
Y+H+ R Y
Sbjct: 97 LAYIHMFRNFY 107
>UniRef50_Q748R9 Cluster: Cytochrome b/b6; n=7;
Desulfuromonadales|Rep: Cytochrome b/b6 - Geobacter
sulfurreducens
Length = 206
Score = 42.7 bits (96), Expect = 0.008
Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 2/149 (1%)
Frame = +2
Query: 23 IGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFI 202
+G L I++G+ L YY + AF + ++ V G +R LH + F
Sbjct: 27 LGGLAFTAFFALIVSGVLLLFYYQPTPDRAFDSILFLESTVVGGKYLRALHRLASHGFLC 86
Query: 203 CIYLHIGRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLL 376
++LHI R + +F + + Y+LP Q++FW LL
Sbjct: 87 LMFLHILRVVLTGAFRPPRELTWVVGVGLLGLSVFEAYTGYLLPMDQLAFWATRTGMELL 146
Query: 377 SAIPYLGTILVN*I*GGFAVDNATLTRFY 463
+ P G + + G ++ +L RFY
Sbjct: 147 ATFPGGGWLRAVLVPDGVG-ESLSLLRFY 174
>UniRef50_Q3LHR7 Cluster: Cytochrome b; n=1; Trichosporon
domesticum|Rep: Cytochrome b - Trichosporon domesticum
Length = 132
Score = 42.7 bits (96), Expect = 0.008
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = +2
Query: 536 GSNNPLGLNRNLDKIPFHPFFTFKD 610
GS+NPLG++ N D+IP HP++ FKD
Sbjct: 2 GSSNPLGISSNSDRIPMHPYYMFKD 26
Score = 41.9 bits (94), Expect = 0.014
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +2
Query: 368 NLLSAIPYLGTILVN*I*GGFAVDNATLTRFYT 466
N+LSAIP++G V + GGF+V+NATL RF++
Sbjct: 28 NMLSAIPWIGQDFVEFVWGGFSVNNATLNRFFS 60
>UniRef50_Q97BT4 Cluster: Cytochrome b; n=2; Thermoplasma|Rep:
Cytochrome b - Thermoplasma volcanium
Length = 537
Score = 42.7 bits (96), Expect = 0.008
Identities = 21/74 (28%), Positives = 36/74 (48%)
Frame = +2
Query: 26 GSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFIC 205
G+L + +++TG+ L YY + A+ +V YG II T H GA
Sbjct: 41 GALTMFAFLYEVVTGIILLFYYQPSN--AYTSTETFLHSVPYGEIILTTHLYGAYIMIAL 98
Query: 206 IYLHIGRGIYYESF 247
+Y+H+ R I+ ++
Sbjct: 99 VYIHLLRNIFVGAY 112
>UniRef50_Q91096 Cluster: Cytochrome b; n=2; Malaconotidae|Rep:
Cytochrome b - Laniarius aethiopicus
Length = 98
Score = 41.9 bits (94), Expect = 0.014
Identities = 29/96 (30%), Positives = 46/96 (47%)
Frame = +1
Query: 28 IPTSFMSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFIFFYLH 207
+P M N++N + ++ L S++ S ++PK + + N TC S YLH
Sbjct: 3 LPARPMLNHTNCHRTTTSHALXSRHYPSLFLRSPHMPKRTIRMTNPKPTCKRSLPILYLH 62
Query: 208 LFTYRTRNLL*IF*LKICMINWNYNFIYTNSNCFHR 315
L T+ TR LL + + + +Y NSNCF R
Sbjct: 63 LPTHWTRILLWLISKQRNLKRRSYPTPNPNSNCFRR 98
>UniRef50_Q7NJG2 Cluster: Cytochrome b6; n=1; Gloeobacter
violaceus|Rep: Cytochrome b6 - Gloeobacter violaceus
Length = 217
Score = 41.9 bits (94), Expect = 0.014
Identities = 31/149 (20%), Positives = 60/149 (40%), Gaps = 2/149 (1%)
Frame = +2
Query: 23 IGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFI 202
+ S L++ ++TG+ L + ++ A+ I ++G +R LH +S +
Sbjct: 42 LSSATVTFLVLALLTGVLLGANFVPSLG-AYDSTRQITYQTSFGWAVRGLHWWASSLTLV 100
Query: 203 CIYLHIGRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQISFWGATVITNLL 376
C +Y F K++ Y LP Q ++W + NLL
Sbjct: 101 CSLAFTALAYWYGYFRGPAKWMWWTGLVMGLMLLGANVTGYYLPLDQNAYWRLMIEANLL 160
Query: 377 SAIPYLGTILVN*I*GGFAVDNATLTRFY 463
+ +P LG + + G V +A++ R +
Sbjct: 161 ADVPVLGAAVKYFLLNGSGVSDASIARIH 189
>UniRef50_Q85RG3 Cluster: Cytochrome b; n=1; Aegotheles savesi|Rep:
Cytochrome b - Aegotheles savesi (New Caledonian
owlet-nightjar)
Length = 96
Score = 40.7 bits (91), Expect = 0.033
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +2
Query: 47 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNY 151
L+ I+TGL L ++YTA+ +AF V + CRNV Y
Sbjct: 4 LVTXILTGLLLAMHYTADATLAFSSVAHTCRNVQY 38
>UniRef50_A7QK39 Cluster: Chromosome chr16 scaffold_110, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_110, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 184
Score = 39.5 bits (88), Expect = 0.076
Identities = 34/119 (28%), Positives = 48/119 (40%)
Frame = +2
Query: 338 ISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFYTXXXXXXXXXXXXXXXXX 517
+SFWGAT T + Y + + G F D ATL F++
Sbjct: 1 MSFWGATHHTY---SRRYHNDLAL----GWFLYD-ATLNYFFSLHHLLSFVLVGDILFHL 52
Query: 518 XXXXQTGSNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNF 694
Q GSNNPLG++ LDKI F+P+ K+ P +LG +N+
Sbjct: 53 VALHQYGSNNPLGVHLELDKISFYPYCFVKNLVGQVAYVIFSFIWIFYAPNVLGHLNNY 111
>UniRef50_Q8HE84 Cluster: Cytochrome b; n=1; Lyristes plebejus|Rep:
Cytochrome b - Lyristes plebejus
Length = 132
Score = 38.7 bits (86), Expect = 0.13
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = +1
Query: 388 LFRNYISKLNLRGICCR*CYINPILHISFFITVHY 492
L YISKLNL ICC N IL +FF T+HY
Sbjct: 14 LIXEYISKLNLSWICCWQRNFNTILFTTFFNTLHY 48
Score = 35.1 bits (77), Expect = 1.6
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +2
Query: 575 KIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDN 691
KIPFHP+F+ KD PYLLGDP N
Sbjct: 76 KIPFHPYFSIKD-MLGFMSAVSCFWNYLLEPYLLGDPKN 113
>UniRef50_Q7M2D4 Cluster: Ubiquinol-cytochrome-c reductase (EC
1.10.2.2) cytochrome b; n=1; Triticum timopheevii|Rep:
Ubiquinol-cytochrome-c reductase (EC 1.10.2.2)
cytochrome b - Triticum timopheevi (Sanduri wheat)
Length = 207
Score = 37.5 bits (83), Expect = 0.31
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +2
Query: 185 ASFFFICIYLHIGRGIYYESFNLKYV 262
AS FFI +YLHI RG+YY S+ ++V
Sbjct: 23 ASMFFIVVYLHIFRGLYYASYPREFV 48
>UniRef50_A3H909 Cluster: Cytochrome b/b6-like; n=1; Caldivirga
maquilingensis IC-167|Rep: Cytochrome b/b6-like -
Caldivirga maquilingensis IC-167
Length = 490
Score = 37.5 bits (83), Expect = 0.31
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +2
Query: 23 IGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFFI 202
+G++ L Q +TGL L +YY + A+ I NV +G II + H GA +
Sbjct: 54 LGAIATSALAWQALTGLVLLLYYQPS--NAYDSTMAIIHNVPFGSIILSSHLYGAYVMIL 111
Query: 203 CIYLH 217
+Y+H
Sbjct: 112 AVYVH 116
>UniRef50_O47500 Cluster: RT-like protein; n=1; Venturia
inaequalis|Rep: RT-like protein - Venturia inaequalis
(Apple scab fungus)
Length = 760
Score = 37.1 bits (82), Expect = 0.41
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +2
Query: 2 NISS**NIGSLLALCLIIQIITGLFLTIY 88
NIS N GSLLA CL+IQIITG+ L ++
Sbjct: 25 NISYLWNFGSLLAFCLVIQIITGVTLAMH 53
>UniRef50_Q5DKX9 Cluster: Cytochrome b; n=8; Pseudococcidae|Rep:
Cytochrome b - Antonina pretiosa
Length = 211
Score = 35.9 bits (79), Expect = 0.94
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +2
Query: 539 SNNPLGLNRNLDKIPFHPFFTFKDXXXXXXXXXXXXXXXXXNPYLLGDPDNF 694
S+NPLG+N N+D I +P+ KD P LL + DNF
Sbjct: 38 SSNPLGMNNNIDLITLNPYSIMKDMIMLILNMMMFLNLNFYLPMLLNNFDNF 89
>UniRef50_Q703H8 Cluster: Cytochrome b; n=2; Halobacteriaceae|Rep:
Cytochrome b - Halobacterium mediterranei (Haloferax
mediterranei)
Length = 485
Score = 35.9 bits (79), Expect = 0.94
Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 21/168 (12%)
Frame = +2
Query: 23 IGSLLALCLIIQIITGLFLTIYY---TANIEI--------------AFYRVNYICRNVNY 151
+G + C ++ ++TG+FL +++ T++++ AF V +I ++ +
Sbjct: 47 LGEVALFCFLLLVLTGMFLGMFFEPSTSDVKYEGSVAKFQGEEVPEAFASVLHITYDIPF 106
Query: 152 G*IIRTLHANGASFFFICIYLHIGR----GIYYESFNLKYV*LXXXXXXXXXXXXXXXXY 319
G IR +H A F I LH+ R G Y +V Y
Sbjct: 107 GMFIRRMHHWAAHLFVASIGLHMLRVFFTGAYRNPREPNWV--VGTALAGLSMGAAYTGY 164
Query: 320 VLP*GQISFWGATVITNLLSAIPYLGTILVN*I*GGFAVDNATLTRFY 463
LP + + + NL ++IP +G ++ GG +AT+ R Y
Sbjct: 165 ALPFDEFAATATGIGYNLATSIPLVGEVIGKAFFGGEFPSSATIPRLY 212
>UniRef50_Q9I8C6 Cluster: Cytochrome b; n=2; Phasianidae|Rep:
Cytochrome b - Gallus gallus (Chicken)
Length = 113
Score = 35.5 bits (78), Expect = 1.2
Identities = 28/103 (27%), Positives = 55/103 (53%)
Frame = +1
Query: 13 LMKYRIPTSFMSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFI 192
+MK+R+P S + ++ N + ++ LHS++ S L +LP+ + L + I
Sbjct: 1 MMKFRLPISSLPHDPNPHRPTTSHALHSRHIPSLLLRSPHLPERTIRLTHPESPRKRRLI 60
Query: 193 FFYLHLFTYRTRNLL*IF*LKICMINWNYNFIYTNSNCFHRLC 321
+L+L ++RTR +L + L+ + + + +T+S HRLC
Sbjct: 61 LLHLYLPSHRTRPILRLLPLQGNLKHRSNPPPHTHS---HRLC 100
>UniRef50_Q70LX1 Cluster: Cytochrome b; n=1; Hoplobatrachus
rugulosus|Rep: Cytochrome b - Hoplobatrachus rugulosus
Length = 112
Score = 34.3 bits (75), Expect = 2.9
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +1
Query: 355 NRNYKSIICNPLFRNYISKLNLRGICCR*CYINPILHIS 471
N ++KS IC P++ + +NL + CR + N ILH+S
Sbjct: 2 NSHHKSSICGPIYWHRPRPMNLGWVFCRQRHANSILHLS 40
>UniRef50_UPI0000F2E488 Cluster: PREDICTED: similar to submaxillary
apomucin, partial; n=1; Monodelphis domestica|Rep:
PREDICTED: similar to submaxillary apomucin, partial -
Monodelphis domestica
Length = 745
Score = 33.9 bits (74), Expect = 3.8
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -2
Query: 384 IADNRFVITVAPQKDI*PQGKT 319
+AD R ITVAPQKDI P G T
Sbjct: 1 MADRRLAITVAPQKDICPHGNT 22
>UniRef50_Q9B903 Cluster: Cytochrome b; n=1; Petrodromus
tetradactylus|Rep: Cytochrome b - Petrodromus
tetradactylus (Four-toed elephant shrew)
Length = 82
Score = 33.9 bits (74), Expect = 3.8
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +1
Query: 58 NYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFIFFYLHLFTYRTRNLL 237
N W I ++ LH ++ + L S +LP KL + N C S YL +++ RTR LL
Sbjct: 8 NPNWPIPSHALHLRHPHRILLSNPHLPGRKLRMTNPLYPCQRSLPILYLPIYSRRTRYLL 67
>UniRef50_Q4YBP9 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 358
Score = 33.9 bits (74), Expect = 3.8
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Frame = +1
Query: 73 IFNNILH--SKY*NSFL*SKLYLPKCKLWLNNSNITC*WSF--IFFYLHLFTYRTRNLL* 240
IFN +LH + Y N + KLYL L+ N S I +SF IFF+L +F Y + +
Sbjct: 281 IFNTVLHWINIYLNFTMSKKLYLKYKTLYKNISFIFSYFSFDEIFFFLLIF-YSSFFITS 339
Query: 241 IF*LKICMINWNYNFI 288
L +C+ + YNFI
Sbjct: 340 SL-LSLCLFYYIYNFI 354
>UniRef50_UPI000155471A Cluster: PREDICTED: similar to epsin 3; n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
epsin 3 - Ornithorhynchus anatinus
Length = 188
Score = 33.5 bits (73), Expect = 5.0
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +2
Query: 23 IGSLLALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG-*IIRTLHANGASFFF 199
IG LLAL + QII + + YT NI N N YG T+ G +FFF
Sbjct: 106 IGGLLALAAVFQIIALVIYPVKYTQNIVNRDGTANVYDYNWAYGFGWAATIIEIGCAFFF 165
Query: 200 ICI 208
C+
Sbjct: 166 CCL 168
>UniRef50_Q5SH00 Cluster: Quinol-cytochrome c reductase, cytochrome
b subunit; n=2; Thermus thermophilus|Rep:
Quinol-cytochrome c reductase, cytochrome b subunit -
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 420
Score = 33.1 bits (72), Expect = 6.6
Identities = 33/145 (22%), Positives = 58/145 (40%), Gaps = 15/145 (10%)
Frame = +2
Query: 23 IGSLLALCLIIQIITGLFLTIYYTANIE-----------IAFYRVNYICRNVNYG*IIRT 169
+G + ++ ++TG+FLT+ Y +I A+ V YI ++ +G +IR+
Sbjct: 31 LGEITLFAFVVLVLTGVFLTLNYEPSIREVRLADGRTVPAAYASVLYI-DSLPFGAVIRS 89
Query: 170 LHANGASFFFICIYLHIGR----GIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQ 337
LH A +LH+ R G Y + L Y L Y LP
Sbjct: 90 LHHWSAHVMIAAAFLHMLRILLSGAYKKPRELNY--LVGLGLLGLTVVTAFTGYALPYDN 147
Query: 338 ISFWGATVITNLLSAIPYLGTILVN 412
+ + + +IP++G L +
Sbjct: 148 YAVTATRIGYGIAHSIPWIGGALAD 172
>UniRef50_Q2W546 Cluster: Cytochrome b subunit of the bc complex;
n=4; Magnetospirillum|Rep: Cytochrome b subunit of the
bc complex - Magnetospirillum magneticum (strain AMB-1 /
ATCC 700264)
Length = 524
Score = 32.7 bits (71), Expect = 8.8
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 65 TGLFLTIYYTANIEIAFYRVNYICRNVNY-G*IIRTLHANGASFFFICIYLHIGR 226
+GL+L + Y + A+ + YI R Y G +IR+LH G+ + + LH+ R
Sbjct: 48 SGLYLFVPYDTSAVRAWNSIEYISREQWYWGGLIRSLHRYGSDAMVLTMMLHLVR 102
>UniRef50_Q9AVX9 Cluster: Putative U5 snRNP-specific protein; n=1;
Guillardia theta|Rep: Putative U5 snRNP-specific protein
- Guillardia theta (Cryptomonas phi)
Length = 1436
Score = 32.7 bits (71), Expect = 8.8
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 1/129 (0%)
Frame = +1
Query: 49 NNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFIFFYLHLFTYRTR 228
N S FNN+ HSK + FL K+ L+ + C +++ F ++ Y +
Sbjct: 1224 NKSGLKNFYFNNVKHSKVEDKFL--KITKLHKNLFYKSDKKKC-LNYLLFIFYI--YNWK 1278
Query: 229 NLL*IF*LKICMINWNYNFIYTNSNCFHRLCLTLRSNIFLGGNRNYKSIICNPLFRN-YI 405
NL L IC I NY F Y+ + L+ FL RN K II F N Y
Sbjct: 1279 NLYLNEKLNIC-IKQNY-FYYSGFLYYDYNIKKLKK--FLAFFRNSKIIIIREKFINLYS 1334
Query: 406 SKLNLRGIC 432
S+++L C
Sbjct: 1335 SEISLSNSC 1343
>UniRef50_Q25811 Cluster: Rps17 protein; n=1; Plasmodium
falciparum|Rep: Rps17 protein - Plasmodium falciparum
Length = 74
Score = 32.7 bits (71), Expect = 8.8
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = -3
Query: 146 LHFGKYNLLYKKLFQYLLCNILLKIIQ**FELLDIKLVGILYFIKKKY 3
+ F KYN YKKL LLCN+ +KI E++ + Y+ K KY
Sbjct: 21 ISFYKYNFKYKKL---LLCNLYIKIYDNRNEIIINDYILFKYYKKSKY 65
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,507,394
Number of Sequences: 1657284
Number of extensions: 8555090
Number of successful extensions: 16440
Number of sequences better than 10.0: 131
Number of HSP's better than 10.0 without gapping: 15676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16289
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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