Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0151
         (479 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q73CC9 Cluster: Putative uncharacterized protein; n=1; ...    34   1.9  
UniRef50_Q97WB0 Cluster: Putative uncharacterized protein; n=2; ...    32   5.8  

>UniRef50_Q73CC9 Cluster: Putative uncharacterized protein; n=1;
           Bacillus cereus ATCC 10987|Rep: Putative uncharacterized
           protein - Bacillus cereus (strain ATCC 10987)
          Length = 262

 Score = 33.9 bits (74), Expect = 1.9
 Identities = 18/48 (37%), Positives = 28/48 (58%)
 Frame = +2

Query: 155 IVYLVSLFNYHRYMFAAWS*LINFIMSSVLPLILXIFVCILPRILVVF 298
           I  L S+ N+   +   W  L+N ++S +L  +  IFV ILP I+V+F
Sbjct: 206 IFLLFSIINF--VISFDWIGLVNLVVSVILTFLSNIFVAILPLIIVLF 251


>UniRef50_Q97WB0 Cluster: Putative uncharacterized protein; n=2;
           Sulfolobus|Rep: Putative uncharacterized protein -
           Sulfolobus solfataricus
          Length = 489

 Score = 32.3 bits (70), Expect = 5.8
 Identities = 13/35 (37%), Positives = 23/35 (65%)
 Frame = +2

Query: 164 LVSLFNYHRYMFAAWS*LINFIMSSVLPLILXIFV 268
           L++ +NY +Y+F     L++F   S+ PLI+ IF+
Sbjct: 57  LITFYNYKKYVFLLPLSLLSFFSVSLTPLIISIFI 91


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 344,922,458
Number of Sequences: 1657284
Number of extensions: 5157269
Number of successful extensions: 8660
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8660
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27290400475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)