Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0097
         (734 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1; ...    63   8e-09
UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1; ...    40   0.048
UniRef50_Q1FHK7 Cluster: Binding-protein-dependent transport sys...    36   1.4  
UniRef50_Q05FS0 Cluster: Tyrosyl-tRNA synthetase; n=1; Candidatu...    34   4.2  
UniRef50_Q8IPD1 Cluster: CG31720-PA; n=1; Drosophila melanogaste...    33   7.3  
UniRef50_Q7R8F1 Cluster: GAF domain protein; n=3; Plasmodium (Vi...    33   7.3  
UniRef50_Q8XJW3 Cluster: V-type sodium ATP synthase subunit C; n...    33   9.6  
UniRef50_P36125 Cluster: Protein GMH1; n=5; Saccharomycetaceae|R...    33   9.6  

>UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 77

 Score = 62.9 bits (146), Expect = 8e-09
 Identities = 33/56 (58%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
 Frame = -2

Query: 730 LADPADFVVPQSINKRPKLLYKINLKQTKESVRRG-THQRKNKIVIFI*FRAFSYL 566
           LADPADFVVPQSINKRPK LYKINLKQTK   + G T + K     ++  R F ++
Sbjct: 22  LADPADFVVPQSINKRPKHLYKINLKQTKGIRQTGDTSKEKQNCYFYLIPRIFIFI 77



 Score = 58.8 bits (136), Expect = 1e-07
 Identities = 27/32 (84%), Positives = 27/32 (84%)
 Frame = -1

Query: 659 LKTNKGIRPTGYTSKEKQNCYFYLIPGIFIFI 564
           LK  KGIR TG TSKEKQNCYFYLIP IFIFI
Sbjct: 46  LKQTKGIRQTGDTSKEKQNCYFYLIPRIFIFI 77


>UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 47

 Score = 40.3 bits (90), Expect = 0.048
 Identities = 19/26 (73%), Positives = 21/26 (80%)
 Frame = +2

Query: 482 LKLEYGWTDLANFGLE*FVKSREGLK 559
           LKLE GWTDLANFGLE  V+ + GLK
Sbjct: 20  LKLENGWTDLANFGLELPVEVQRGLK 45


>UniRef50_Q1FHK7 Cluster: Binding-protein-dependent transport
           systems inner membrane component; n=1; Clostridium
           phytofermentans ISDg|Rep: Binding-protein-dependent
           transport systems inner membrane component - Clostridium
           phytofermentans ISDg
          Length = 324

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 19/59 (32%), Positives = 31/59 (52%)
 Frame = -2

Query: 679 KLLYKINLKQTKESVRRGTHQRKNKIVIFI*FRAFSYLFTF*TLSGLHKSFKTKISQIG 503
           ++L K+  K  KES R    Q  N  + +I    FS LF++  ++GL  +FK   + +G
Sbjct: 3   RILKKVKQKTGKESFRAQMKQHGNLFIFYIPAVVFSILFSYIPMAGLIMAFKANPNLLG 61


>UniRef50_Q05FS0 Cluster: Tyrosyl-tRNA synthetase; n=1; Candidatus
           Carsonella ruddii PV|Rep: Tyrosyl-tRNA synthetase -
           Carsonella ruddii (strain PV)
          Length = 325

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = -2

Query: 265 LCYK*ILFFVFIKNYNQNFCFWINLNSFFLNTICLAFTAFINLSIINVTRNGYR**GWRI 86
           L YK  +  + I +Y   F   INL +  +N+ICL       L  I+V  N      + +
Sbjct: 46  LIYKKFIIIIIIGDYTTKFKKKINLKNLIINSICLKSQIKNILGEIDVVFNSIWYNKFNL 105

Query: 85  QYFTNLYD-VYF*SLCNKTI 29
            YF NL + V   +  NKT+
Sbjct: 106 CYFINLINLVSIKNYINKTL 125


>UniRef50_Q8IPD1 Cluster: CG31720-PA; n=1; Drosophila
           melanogaster|Rep: CG31720-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 579

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +1

Query: 616 FDVYPVGRIPLFVLSLFYTKV*VFYLSIEALRSLPGQLV 732
           F +YP+G   L +   FY    + Y+SI  LR+LPG+++
Sbjct: 373 FKMYPIG---LLISCCFYALTLIVYISIAKLRNLPGKIL 408


>UniRef50_Q7R8F1 Cluster: GAF domain protein; n=3; Plasmodium
           (Vinckeia)|Rep: GAF domain protein - Plasmodium yoelii
           yoelii
          Length = 703

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +2

Query: 179 KKTIQINPKTKILIIIFDKNKKQYLFVTQLNIFYIPATIQI 301
           KK  Q    +   + IFDKNK Q+  +   N+ YIP T  I
Sbjct: 528 KKLPQYINSSYAFLFIFDKNKNQFYTIINNNLIYIPITHDI 568


>UniRef50_Q8XJW3 Cluster: V-type sodium ATP synthase subunit C; n=4;
           Clostridium|Rep: V-type sodium ATP synthase subunit C -
           Clostridium perfringens
          Length = 335

 Score = 32.7 bits (71), Expect = 9.6
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -3

Query: 495 YSSFSETNEQQFIFIYIDKAKNAYKN*TISQKNLTDKILD 376
           +  F ETN+ QFI +  D+   A+ +   ++KN+ DK LD
Sbjct: 149 FEKFEETNDPQFIDLIADQYLYAHIHEIANKKNIKDKALD 188


>UniRef50_P36125 Cluster: Protein GMH1; n=5; Saccharomycetaceae|Rep:
           Protein GMH1 - Saccharomyces cerevisiae (Baker's yeast)
          Length = 273

 Score = 32.7 bits (71), Expect = 9.6
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -2

Query: 211 FCFWINLNSFFLNTICLAFTAFINLSIINV 122
           +CF ++ NSF +  +CL F  F+ L IIN+
Sbjct: 175 YCFDVHCNSFLIILLCLYFIQFLLLPIINL 204


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 598,250,187
Number of Sequences: 1657284
Number of extensions: 11050416
Number of successful extensions: 27355
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 26109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27345
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59677054775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)