Silkworm BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0013
         (744 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4WJC0 Cluster: Nitrate reductase, gamma subunit; n=2; ...    35   2.4  
UniRef50_Q54V93 Cluster: Putative uncharacterized protein; n=1; ...    33   9.8  

>UniRef50_A4WJC0 Cluster: Nitrate reductase, gamma subunit; n=2;
           Pyrobaculum|Rep: Nitrate reductase, gamma subunit -
           Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321)
          Length = 257

 Score = 34.7 bits (76), Expect = 2.4
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
 Frame = -3

Query: 460 WIACNFYWSLFYLYQRFVFNTGLFAT--QITYL*TSKKLQHVIVALLNGTF--LILLGAV 293
           W A  F+W +F      + +T LF T  Q+  L  S + + +    L   F  + L+G V
Sbjct: 76  WGAFLFHWGIFLTL--LIGHTALFFTPGQLQALGISPETRKIAAIYLGAAFGFITLIGLV 133

Query: 292 FMWYLDIFRNNTYELRTPYYLDD 224
            +WY  + +    E++T  YLDD
Sbjct: 134 MLWYRRLVKK---EVKTFTYLDD 153


>UniRef50_Q54V93 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 884

 Score = 32.7 bits (71), Expect = 9.8
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +1

Query: 571 YIHYNVTFDFIIII-HKFLNI*KCDYYSKMATDGDENTLNIIK*HNQNENLNN 726
           Y  Y+   DFII   +K L I K + +SK   + + N LN    +N N N NN
Sbjct: 37  YSFYDAPLDFIIKTRNKQLLIEKLNLFSKFINNNNSNNLNNNNNNNNNNNNNN 89


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,594,356
Number of Sequences: 1657284
Number of extensions: 12749125
Number of successful extensions: 25325
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25299
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60911752460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)