Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40117
         (819 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.41 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.9  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   6.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.41
 Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = +1

Query: 523 LICVYSGQSTYSL-NHHIRDIDLCIMLLLVNKNILLHVL*TLYFT*PCF*INLLFFSAPQ 699
           L+CVY     + +   H+  + LCI   +V    LL +    Y     F ++LLF     
Sbjct: 110 LLCVYYFYYAFIIFTVHLLFL-LCIYYFVVPLFFLLCIY-YFYCAFIIFTVHLLFLLCIY 167

Query: 700 HLTCYFTTFTM 732
           H  C F  FTM
Sbjct: 168 HFFCAFIIFTM 178



 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 682 FFSAPQHLTCYFTTFTMKSRVYSN 753
           F   P H  C F+ + +KS  Y N
Sbjct: 305 FIIFPTHFYCAFSLYPLKSTFYLN 328


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
 Frame = +2

Query: 344 YLNKT---CILKINIYCFFSIASRITYFAVII 430
           Y  KT    +LK N YC F I   ++ F +++
Sbjct: 306 YFGKTGRKTVLKTNKYCNFIILFYLSVFVILV 337


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +2

Query: 356 TCILKINIYCFFSIASRITYFA 421
           TC   IN YCF +  S I   A
Sbjct: 180 TCAFGINTYCFRNDNSEILKMA 201


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,329
Number of Sequences: 336
Number of extensions: 4421
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22414104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)