Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30103
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   1.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    23   3.2  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   4.2  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   4.2  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   4.2  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   7.4  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   7.4  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   7.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   9.7  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/29 (27%), Positives = 19/29 (65%)
 Frame = -2

Query: 212 LLVKHVLAFVGLSAGETDYVPFSILYSSK 126
           +L  H+L+F+ +  GET +V  +++  ++
Sbjct: 172 ILACHMLSFLMVHQGETQFVAANVILKTR 200


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 599  MSFSEAPEILFWKD 558
            + F  + EILFWKD
Sbjct: 1225 VEFLSSTEILFWKD 1238


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 599  MSFSEAPEILFWKD 558
            + F  + EILFWKD
Sbjct: 1225 VEFLSSTEILFWKD 1238


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 599  MSFSEAPEILFWKD 558
            + F  + EILFWKD
Sbjct: 1225 VEFLSSTEILFWKD 1238


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 599  MSFSEAPEILFWKD 558
            + F  + EILFWKD
Sbjct: 1225 VEFLSSTEILFWKD 1238


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = -2

Query: 89  PSCSITPMQVAPARTR*RQVWSPTLPKPW 3
           PS S  P  V P     R+   PT  KPW
Sbjct: 218 PSQSPEPESVRPLSLVVRRCEEPTEEKPW 246


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 168 PGAKAYEGENMLYEKCD 218
           PGA  Y+ ENML +  +
Sbjct: 414 PGAAYYQNENMLQKNAE 430


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 15/51 (29%), Positives = 21/51 (41%)
 Frame = +3

Query: 480 ICWNRSKSLSAAVRSRGRPHPRHSLRVLPEENLRRLREGHRALRTRLHHGE 632
           +C NRS      +++  R H         E + R  R+ H     RLH GE
Sbjct: 139 VC-NRSFGYKHVLQNHERTHTGEKPFECQECHKRFTRDHHLKTHMRLHTGE 188


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 168 PGAKAYEGENMLYEKCD 218
           PGA  Y+ ENML +  +
Sbjct: 362 PGAAYYQNENMLQKNAE 378


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +2

Query: 293 EAANGPTTPAADKILIDRNILVIPD 367
           + AN  TTP ++++L+D  +   P+
Sbjct: 251 DMANMLTTPLSEEVLLDELLRHFPE 275


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 16/56 (28%), Positives = 23/56 (41%)
 Frame = -3

Query: 484 QMVVRFPLVFECQTSVRHVIEVLEPLEE*DGDTTSVDVEVGDHENVAIDEDLVCSR 317
           +M + FPL+ EC   +R  +E  +  EE D  T      V      A   +  C R
Sbjct: 138 KMKLMFPLMQECVDDLRRFLE--DHTEEIDVKTAMKKYSVDIISTCAFGINTYCFR 191


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 12/53 (22%), Positives = 21/53 (39%)
 Frame = +3

Query: 531 RPHPRHSLRVLPEENLRRLREGHRALRTRLHHGEIR*GHHEDSHEVQPRFRSE 689
           R H        P  N R +R  H A   + H+G  + G  +   + +   +S+
Sbjct: 367 RTHTGEKRFACPICNKRFMRSDHLAKHVKTHNGNGKKGSSDSCSDSEENSQSD 419


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 501 SLSAAVRSRGRPHPRHSLRVLPEEN 575
           S  +   S   P  RHS+ +L E+N
Sbjct: 222 SYKSVPMSFSSPRRRHSINLLEEDN 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,129
Number of Sequences: 336
Number of extensions: 3253
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)