Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30097
         (358 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    25   0.31 
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    25   0.31 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   2.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   2.9  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   2.9  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    21   5.0  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    20   6.6  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    20   6.6  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    20   8.7  

>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 24.6 bits (51), Expect = 0.31
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 3   QADHPRQVQRHHQVAGFQPAGRQG 74
           Q  HP+  Q HHQ       G+QG
Sbjct: 172 QEQHPQHHQPHHQQQHMMYGGQQG 195


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 24.6 bits (51), Expect = 0.31
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 3   QADHPRQVQRHHQVAGFQPAGRQG 74
           Q  HP+  Q HHQ       G+QG
Sbjct: 174 QEQHPQHHQPHHQQQHMMYGGQQG 197


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = -1

Query: 154 LLRHPGTSS*LSDCKCLPILSACAHTPPCRPAGWNP 47
           +L+ P T     D K LP      H PP  P G NP
Sbjct: 720 MLQSPLTPHEAFDVK-LPPPPHPHHQPPRNPVGTNP 754


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = -1

Query: 154 LLRHPGTSS*LSDCKCLPILSACAHTPPCRPAGWNP 47
           +L+ P T     D K LP      H PP  P G NP
Sbjct: 612 MLQSPLTPHEAFDVK-LPPPPHPHHQPPRNPVGTNP 646


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 191 PEPEVPPPGLEALAPPS 241
           P P+VPP  L  + PP+
Sbjct: 176 PLPQVPPLPLPPIFPPT 192


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 8/20 (40%), Positives = 11/20 (55%), Gaps = 3/20 (15%)
 Frame = -1

Query: 259 LVNRPPRWWGQ---RLQPRG 209
           LV + P WW Q   +  P+G
Sbjct: 88  LVKQKPEWWEQLQKKFDPQG 107


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +2

Query: 140 RVPEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRS 250
           RVP+       +S +  PEP  P    + +   SR+S
Sbjct: 275 RVPQHQVLQSPSSTSSSPEPRSPESLFKPVTVISRQS 311


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 265 GMLVNRPPRWWGQR 224
           G+L +R P+W  +R
Sbjct: 114 GLLTSRGPKWQNRR 127


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = +1

Query: 19  DKCNVTIKW 45
           +KCN+T  W
Sbjct: 218 EKCNLTFSW 226


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,758
Number of Sequences: 336
Number of extensions: 1515
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7193380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)