Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30093
         (743 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      24   1.5  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   2.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   6.0  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   7.9  

>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -2

Query: 475 QHLVGETVFGVAHIFASFNDTFVHVTDLSGRETI 374
           +H+VG  V  V  ++ SFN T  +V D   RE I
Sbjct: 21  EHMVGTIVVVVRGVWVSFNQTAQNV-DTFVREQI 53


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 417 SLNEAKMCATPNTVSPTK 470
           ++NE + C+TP   SPTK
Sbjct: 427 NVNENQDCSTPTENSPTK 444


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +3

Query: 480 PRVTWTSSLALCFFSGPWLS 539
           P   WTS   + F  G WLS
Sbjct: 290 PIHVWTSKEKISFLRGFWLS 309


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 625 PDGKNFEIIFELVHN 581
           P G NFEI FE  +N
Sbjct: 319 PAGSNFEIGFENYYN 333


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,882
Number of Sequences: 336
Number of extensions: 3921
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)