Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30090
         (820 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   1.3  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   2.2  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    23   2.2  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    23   2.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   6.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   6.7  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   8.9  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 324 SILLGFLRTGNSVFRPGLCA 265
           S LL FL++GN + RP  C+
Sbjct: 701 SELLDFLKSGNRLARPANCS 720


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
 Frame = -1

Query: 319 SVGFLK---NW*QCLSPWTLRKILTGNNISRRGTFCRSSWIGDFFEFPTIWLVQQDQQF 152
           ++ F+K    W Q +  W   ++L GN   RR    +  +I  F    TI L  Q  +F
Sbjct: 408 NIAFIKLATEWPQLMKAWLKIELLVGNLGMRRNFRKKLDFIFTFITLLTIGLYFQLCEF 466


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
 Frame = -2

Query: 795 SQLSSIFFLPETKSGL---CGIRRVNVTNWFHN 706
           S LS+ +   E K  L   CGI    V+NWF N
Sbjct: 251 SHLSNPYPSEEAKEELARKCGITVSQVSNWFGN 283


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +3

Query: 207 IHELRQNVPRLEILLPVNILRKVQGERHCYQFL 305
           +H L +  P  +   P N L +    RH Y F+
Sbjct: 95  VHRLEEYYPNPDKFDPDNFLPERTANRHYYSFI 127


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 683  LVVSLVYLNKITVHIFHFLNLRHN 612
            LVV L+ LNK  +H+   L +R N
Sbjct: 1281 LVVFLLQLNKDQIHVKWPLGVRTN 1304


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 683  LVVSLVYLNKITVHIFHFLNLRHN 612
            LVV L+ LNK  +H+   L +R N
Sbjct: 1281 LVVFLLQLNKDQIHVKWPLGVRTN 1304


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 728 LTRLIPHRPDLVSGRKNIDDNCEQ 799
           LT++ P R      RKN+ D C +
Sbjct: 250 LTKMRPKRQSSRRHRKNLKDPCRR 273


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,000
Number of Sequences: 336
Number of extensions: 3959
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22414104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)