Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30076
         (672 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation facto...    77   2e-16
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    24   1.3  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    24   1.3  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    24   1.3  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    24   1.3  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   5.3  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   5.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   6.9  

>AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation factor
           1-alpha protein.
          Length = 56

 Score = 76.6 bits (180), Expect = 2e-16
 Identities = 35/40 (87%), Positives = 37/40 (92%)
 Frame = +2

Query: 509 RFETGVLKPGTIVVFSPANITTEVKSVEMHHEALQEAVPG 628
           R ETGVLKPG +VVF+PANITTEVKSVEMHHEAL EAVPG
Sbjct: 17  RVETGVLKPGMVVVFAPANITTEVKSVEMHHEALPEAVPG 56



 Score = 37.5 bits (83), Expect = 1e-04
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +3

Query: 462 LQDVYKIGGIGTVPVG 509
           LQDVYKIGGIGTVPVG
Sbjct: 1   LQDVYKIGGIGTVPVG 16


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -3

Query: 616 FLESFVVHLHRFDFSSDVG 560
           FLE  + H  RF FSS VG
Sbjct: 68  FLEMTLAHHCRFKFSSSVG 86


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 413 IESFNEAFSVSFAFFTLH 360
           I++FN+ F  SF  FTL+
Sbjct: 271 IDAFNDIFGWSFLLFTLY 288


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 413 IESFNEAFSVSFAFFTLH 360
           I++FN+ F  SF  FTL+
Sbjct: 197 IDAFNDIFGWSFLLFTLY 214


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 574 SSDVGGGKDNNGTWFQHTSFKSPTG 500
           ++ V GG +NNGT   H+ F    G
Sbjct: 182 AAQVSGGNNNNGTPGGHSGFWGQLG 206


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 515 ETGVLKPGTIVVFSPANITTEVKS 586
           ETG ++PG I    P   T EV++
Sbjct: 96  ETGSIRPGVIGGSKPRVATPEVEN 119


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 270 LGCSQFLDV*GYFLLDFLKSG 208
           LG + ++ V    LLDFLKSG
Sbjct: 690 LGGTPYVGVHSSELLDFLKSG 710


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 11/47 (23%), Positives = 21/47 (44%)
 Frame = -3

Query: 550  DNNGTWFQHTSFKSPTGTVPIPPILYTSCRGRRRGLSVGRAGGRMAS 410
            D +GT       + P G++     ++ S  G   G ++  +GG+  S
Sbjct: 941  DRSGTPRSTNGDRKPGGSLGALSSMFDSLSGNNTGDALAPSGGKKGS 987


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,402
Number of Sequences: 336
Number of extensions: 4155
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)